>input_sequence_45832
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-------------------ATGAGACGCAAGCAAAATATGCATGGTATTCTTCACTTCTAATGTTTCAGTTCCACTATCC
TA--CTACTTGACTGGCTATGTGCTGTACATACTGATTTCCTGCTGCTATTAGAGTTATAACATCTTTATGTATTCCTCT
GGCAGAAAATGGCACAATCATGATTCAGTTTGGTCAGCAAGTGCCTAACTGCGAGTCCTCAGCTAGCGATTCTCCTCAAG
AGGTGTCCGGAATGAGCGAAGGAAGCTTTAATGAGCAGAATGATCAATCTGGTTCGCCCTACACTTGCCA---ACTATTT
CTTTTCTGAATTGTTACTAGTCCATAATCTTGTCATATCATCTCTCCTGGAAATACAGAATGGAGTAGTCTCCAAAAATA
ATAATGGAAAGAACGATTATGATGATTGCGGACCTTGATGTGCACTTACATATCAAAGTTAGATGACATTTGTTTCCTCC
TTGTATTTAATACTAGGTAACCGCGATGGCTACACGAAG---AGTGATGAAGGCAAGATGATGTCAGCTTTGTCTCTGGG
CAATTCAGAAACAGCATACACACCGCCAAAACCTGACCGCACTCATCCCTTTGTAAGTCTCTGTTATGATGCTCAAACGT
TGACTAATTTCTGAATTCGAAGTGTTTGTTGAATGGCGAGCATGTGAATTGTGCAAGATGTTCGCTTTTTCAGGCCATAT
CATACCCATATGCTGATCCTTACTATGGTGGTGCAGTGGCAGCCTATGGCGCACATGCTATTGTAAGTGATATTTATGCC
ATCCCTGTTCCCTCACTAATTTCTGGCCTTC-TTTTTTTCTGTGCTTGACGGTGTTGCTTATTTACC----TTTGGCAAC
TGTTTGGATTTTTGTGTGCA------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------AGCATGTGCTCAAGGTATAACTG
GAATGACTATTGAGACAAGGCAACTAAACATGATTGTGTTTAATCACACCAATTTCACTT-AAAGTCAAAATTTCAATGT
TGAGCAGCATACTGGCGGCGGCAACTTATTTTGATTTCAGATATCGCCATCCCTGCCGCAGATTGGTTCTCTTCTTTTTG
TTAGGTTTAATATGGTGCCTTTCGATGTTACTAACTCATCTTTATCTGGTGCAAAACAATTTGAATAGATGCACCCCCAG
ATGGTGGGCATGGTACCATCCTCTCGAGTGCCGCTGCCAATTGAACCGGCCGCCGCCGAAGAGCCCATTTATGTGAACGC
GAAGCAATACCATGCCATTCTCCGAAGGAGACAGCTCCGCGCAAAATTAGAGGCTGAAAATAAGCTGGTGAAGAGCCGCA
AGGTATTATTTTTATGCATGATTTCATTTCGAAAAAACAGAAGTACTATCGTTGGCCCCTTCTACAATCTTTTGGGTTTT
TCCCCT----GTACAAATGAATTTAGTTCATACACACTCTCAACATAACATAACATAACATTCATGCCACTGTTCAGCCG
TACCTCCACGAGTCCCGGCACCAGCACGCGATGAAGCGGGCCCGGGGAACAGGCGGGCGGTTCCTCAACGCGAAGGAGAA
GTCCGA---GGCCTCCGGCGGCGGCAATGCATCAGCGAGACCTGGCTACGCCGGCGTTCCTGCAGACGGC---GGCATGT
TCTCGAAGCACGACCACACCTTACCGTCCGGTGACTTCCATTACCGCGCGAGAGGGGGCGCCTAG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr4D_1_TraesCS4D01G289600
GAGGGAGAGGAGACTTGCAGAGGAGAGGAGACGGGAGGAGCAAGTTGCGGAGGAGGCAGCGGCAAGGGAGGAGGGGTCGC
CGGAAGGGGGACATGCTCCCTCCACATCTCACATCTCGCAGGTCTCCTCCT-----CCTCCTCCT---CTGCCTCTCACT
CGCTTCCCCTGCTTCTCCTCCGGGGTGCGGGCGGGCGCGCCGGCTCTGTGCCTGC------------------TCCTGCC
ATTGCTGACCGTTTCCCTGGGCCGTCTGGCCGGTTTCTCGCTGGATCCGACTGGGTTCTTGCTGTTTCGTTCGGGTTTCG
GCCGATTTGCCGCTCAGATTCGTGGGTGCATTCCGCTGCGGCTCAACTGCGGTCTCGTGTGTGTCTAG-----CTTTTTG
TTTAGTTTAACTAGTAGTTAAATTTATTAGTTAGGGAAGATTTGTGGTAATACTA---CT---------TGGGAGTAAAC
TAAAATCTTGTTGCTTGGATGGTTCAGATTGAGTGTCGACTGTGAATTTGTTGTGATTTCCAGCTATTTCTTCAAAGTAA
CTGTTGTTGTCTGAAATTTTTTAACATCTGTA-----GTAAGTGGGGAGAAGAGAACCCCTGAGCTTATGAATGGGCGAT
TC--ATTTGTCTAGT-GGGGGACTAGCAAATCATCTACTGAGAGTTTGTATACTCAGTTATTAGTACACCTTGCCTTAAG
GATCAGAATTTCTGATTCAGGGGCCAGGTTGATGCACAGTGCTGGTGTGATTTTTT----TTACATGTGCGAGCATATAA
ATCAGTGAGTACAGCATTTGACATGTGCATCATGTCAAATTCGACCGAATCTAAGTTTTCTAAGTGCACACGAACAACTC
CAGTGATCTTGTTCTCT----GTTGCGAGGAGCAATTCTACCAGTATCTCTTCATGTTTCAGCGTTTAATGTATTATTAG
TATTACTTGGACAGTATCACTTTATTCTGTTGTTCTCACTGACCTGCTGCTTACTTGTATGGACAGCTTGAACTGAGAGC
AAGAGTAGAAGCCCATGAGATGAGACGCAAGCAAAATATGCATGGTATTCTTCACTTCTAATGTTTCAGTTCCACTATCC
TA--CTACTTGACTGGCTATGTGCTGTACATACTGATTTCCTGCTGCTATTAGAGTTATAACATCTTTATGTATTCCTCT
GGCAGAAAATGGCACAATCATGATTCAGTTTGGTCAGCAAGTGCCTAACTGCGAGTCCTCAGCTAGCGATTCTCCTCAAG
AGGTGTCCGGAATGAGCGAAGGAAGCTTTAATGAGCAGAATGATCAATCTGGTTCGCCCTACACTTGCCA---ACTATTT
CTTTTCTGAATTGTTACTAGTCCATAATCTTGTCATATCATCTCTCCTGGAAATACAGAATGGAGTAGTCTCCAAAAATA
ATAATGGAAAGAACGATTATGATGATTGCGGACCTTGATGTGCACTTACATATCAAAGTTAGATGACATTTGTTTCCTCC
TTGTATTTAATACTAGGTAACCGCGATGGCTACACGAAG---AGTGATGAAGGCAAGATGATGTCAGCTTTGTCTCTGGG
CAATTCAGAAACAGCATACACACCGCCAAAACCTGACCGCACTCATCCCTTTGTAAGTCTCTGTTATGATGCTCAAACGT
TGACTAATTTCTGAATTCGAAGTGTTTGTTGAATGGCGAGCATGTGAATTGTGCAAGATGTTCGCTTTTTCAGGCCATAT
CATACCCATATGCTGATCCTTACTATGGTGGTGCAGTGGCAGCCTATGGCGCACATGCTATTGTAAGTGATATTTATGCC
ATCCCTGTTCCCTCACTAATTTCTGGCCTTC-TTTTTTTCTGTGCTTGACGGTGTTGCTTATTTACC----TTTGGCAAC
TGTTTGGATTTTTGTGTGCA------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------AGCATGTGCTCAAGGTATAACTG
GAATGACTATTGAGACAAGGCAACTAAACATGATTGTGTTTAATCACACCAATTTCACTT-AAAGTCAAAATTTCAATGT
TGAGCAGCATACTGGCGGCGGCAACTTATTTTGATTTCAGATATCGCCATCCCTGCCGCAGATTGGTTCTCTTCTTTTTG
TTAGGTTTAATATGGTGCCTTTCGATGTTACTAACTCATCTTTATCTGGTGCAAAACAATTTGAATAGATGCACCCCCAG
ATGGTGGGCATGGTACCATCCTCTCGAGTGCCGCTGCCAATTGAACCGGCCGCCGCCGAAGAGCCCATTTATGTGAACGC
GAAGCAATACCATGCCATTCTCCGAAGGAGACAGCTCCGCGCAAAATTAGAGGCTGAAAATAAGCTGGTGAAGAGCCGCA
AGGTATTATTTTTATGCATGATTTCATTTCGAAAAAACAGAAGTACTATCGTTGGCCCCTTCTACAATCTTTTGGGTTTT
TCCCCT----GTACAAATGAATTTAGTTCATACACACTCTCAACATAACATAACATAACATTCATGCCACTGTTCAGCCG
TACCTCCACGAGTCCCGGCACCAGCACGCGATGAAGCGGGCCCGGGGAACAGGCGGGCGGTTCCTCAACGCGAAGGAGAA
GTCCGA---GGCCTCCGGCGGCGGCAATGCATCAGCGAGACCTGGCTACGCCGGCGTTCCTGCAGACGGC---GGCATGT
TCTCGAAGCACGACCACACCTTACCGTCCGGTGACTTCCATTACCGCGCGAGAGGGGGCGCCTAGGGCGGGCCT----TT
GCCCCCTGGCAAATCATCCTTGGCTTATGTGTGTGGTGAATGACCGTCAATTCGGTCCAATGATATTGTAAAACTGAATT
TAGAGTCTGCAAT----TGTTACTTGGGGGTTTGGTAGACGGTCGTTGTGTTTGGGGAC-----------GATGCAGCTG
CA---------GCCGGTTCTCTTGTTGTGGTAGATT--TGTGGCATGGCAGGTGCTGCTAAGCTGGAGCCTGCTTGAACT
GTTTTCCTGTCACTTTG----TTGGGGTAATAATGACCATCCTGTATGATATTAGTACTGACTTGGGAGTAACTAATAAG
CATTCCCGGCGTGATGCATTTTGCGGCCGTGGTCGTGGCGGTGTTTCTTTTGGGCCATGCTGTCCAACAACTTGATGAAA
TGGTTATGAGATGAGACACACATCTTCAGATCTGTGTGTCTGTCCTGACTTATTTGAGGCCGTTGTGGACTGTCCGACTG
CGGAGGCACTCAGGTCGCCGATCTGAACGTAGCCGGCGAGGCGACGCGCGCGCGATGTGCGGCAACGCCGTCGCCGGTGG
GCAGTCCCCTCGCGCCATCGTGTGCAATTCGACACCACTGCCGCAGGACGCATTCTCTCGTTTCCCGTTTCCGCTGCAAC
TAGGTACGGTACACATCAGATGAGCCGGCTGCATGATCCCGCTTCGTCGGCGGGCGACCTCCGTGGGCCGCTCTGCATCA
GCCGGCCAAGCCAACTGGAGTACTCGACATCGCCTCGGCGCGCGGCGATGGAACGGACGGGCTCCACCGCGGCTCCTCGA
GGCGGCACGGGGTATGCCGCCCGCATCCTTGCTTGCTTCCTTTCCTTCGCCCCGCCCGGCCGGCACCTGTCACTGGCCCA
CTGGCACTGGTATTAGGCAGCCTTTGCTGGGCCGTTACCGTGGGCGCGCCAGCGGAGAGAGCGGGATATGATATGAGGCG
GCTTTTGCGAAGCAGGTGGAAGCTTCCGGGCGGCGCGGGGAGCACAACAAAGCGATTGA
>chr4A_1
GAGGGAGAGGAGACTTGCAGAGGAGAGGAGAGAAGAGGCGGAACAAGGGAGGAG---------------GGAGGGGTCGC
CGGAAGGGGGACATGCTCCCTCCGCATCTCACATCTCGCAGGTCTCCTCCCTCCTCCCTCCTCCT---CTGCCGCTCACT
CGCTTCCC-TGCTTCTTCTCCGGGGCGCGGGCGGGC---------------CGGCTG--------------------GCC
ATTGCTGGCCGGTTCCCCGTGCCGTCTGGCCGGTTTCTCGCTGGATCCGACTGGGTTCTTGCCGTTTCGTTCGGGTTTCG
GCCGATTTGCCGCTCAGATTCGTGGGCGCATTCTGCTGCGGTTCTACTCTGGTCTCGTGTGTGTGTGTCCATAGCTTTTC
G---------------TTCTAGTTTAAGTTATAAGAAAGATTAGTGGTGCTAGTA---ATACTATTACTTGGGGGTAAAC
TGAAATCTTGTTGCTTGGAGGGTTCAGATGGAGTGCCCACTGTGAATTTGTTGTGATTTGCAGCTATTTCTTCAAAGCAA
CTGTTGTTGCCTGAATTTTTTTCACAGCTGTAAGCCTGTAAGTGGGGAGAAGAGAACCCCTGAGCTTATGAATGAGCGAT
TCGGATTTGTCTAGC-GGGGGACTAGCAAATCATCTACTTAGAGTTTGTCTACTCAGTTATTAGCGCACCTTA-------
-ATCAGAATTTCTGATTCAGGGACCAGGTTGATGCATAGTGCTGGTGTGAATTTTT----TAG-ATGTCCGGGCATACAA
ATCAGTGAGTACAGCATTTGACATGTGCATCGTGCCAAATTCGAGCGAATCTAAGTTTTTCAAGTGCACACGGACGACTT
TAGTGATCTTTTTTTTTTTGAGTTGGGAGGAGCAATTCTACCAGTATCTATTCATGTTTCAGCGTTTAAT---------G
TA-TACTTGGACAGTATCACTTTATTCTGTTGTTGTGACTGACCTGCTGCTTACTTACATGGACAGCTTGAACTGAGAGC
AAGAGCAGAAGCCCATGAGATGAGACGCAAGCAAAATATGCAAGGTATTCTTCAGTTCCA-------------------C
TATCCTACTTGACTGGCTATGTGCTGTGTATACTGATTTCCTGCTGCTATTAGAGTTACAACTTCTTTTTGTATTCCTCT
GGCAGAAAATGGCACAATCATGATTCAGTTTGGTCAGCAAGTGCCTAACTGCGAGTCCTCAGCTAGCGATTCTCCTCAAG
AAGTGTCCGGAATGAGCGAAGGGAGCTTTAATGAGCAGAATGATCAATCTGGTTCGCCCTAGACTTGCCAACTACTATTT
CTTTTCTGAATT---ATTAGTCCATAATCTTGTGATATCATCTCTCCTGGAAATACAGAATGGAGTAGTCCCCGAAAATA
ATAATGGAAAGAACGATATTGATGATTGCGGACCTTGATGTGCACTTACAAATCAAAGTTAGATGACATTTGTTTCCTCC
TTGTACTTAATACTAGGTAATCGCGATGGCTATACGAAGAGTAGTGATGAAGGCAAGATGATGTCGGCTTTGTCTCTGGG
CAATTCAGAAATGGCATACACACCGCCAAAACCTGACCGCACTCATCCCTTTGTAAGTCTCTATTATGATGCTCAGGCGC
TGGCTAATTTCTGAATTCGAAGTGTGTGTTGAACGGCGAGCATGTGAATTGTGCAAGATGTTCGCTTTTTCAGGCCATAT
CATACCCATATGCTGATCCTTACTATGGTGGTGCAGTGGCAGCCTATGGCGCACATGCTATTGTGAGTGATATTTCTGGC
ATCCCTGTTCCCTCACTAATTTCTGGCCTAA-TTTTTTTCTGTGCTTGATGATGTTGCTTATTTATTTATTTTTTGCAAC
TGTTTGGATTTTTGTGTGCGAAGGGGAGCCTTGGCGCAGTGGTAAAGCTGCTGCCTTGTGACCACGAGGTCATGGGTTCA
AGTCCTGGAAACAGCCTCTTACAAAAATGTAGGGAAAGGCTGCGTACTATAGACCCAAAGTGGTCGGACCCTTCCCTGGA
CCCTGCGCAAGCGGGAGCTACATGCACCAGGTTGCCCTTTTTGGATTTTTGTGTGCGAGCATGTGCTCTAGGTATAACTG
GAATGACTGTTGAGACAAGACAACTAATCATGATTGTGTTTAATCACACCAATTTCACTT-AAAGTCAAATTTTCAATGT
TGAGCAGCATACTGGCGTTGCCAACTTATTTTGATTTCAGA-ATCGTCATCCCTGCCGCAGATTAGTTCTCTTCTTTTTG
TTAGGTGGC-------GCCTTTCGATGTTACTAACTCATCTTTATGTGGTGCAAAACAATTTGAATAGATGCACCCCCAG
ATGGTGGGCATGGTACCATCCTCTCGAGTGCCACTACCGATTGAACCAGCTGCCGCCGAAGAGCCCATTTATGTGAATGC
GAAGCAATACCATGCCATTCTCCGAAGGAGACAGCTCCGCGCAAAATTAGAGGCTGAAAATAAGCTGGTCAAAAGCCGTA
AGGTATTC---TTATGCATGTTTTTACTTG--GAAAAAAAAAGTACTGTAGTTGGCCCCTTGAGC-ATCTTTTGGTTTCT
TTTCCCTGTAGTAGAAATGAATTTGGTTCACACACTCTCAATG-------TAACACAACATTCATGCCTCTGTTCAGCCG
TACCTGCATGAGTCCCGGCACCAGCACGCGATGAAGCGGGCTCGGGGAACAGGCGGGCGGTTCCTCAACGCAAAGGAGAA
GTCTGAAGCTTCA---GGCGGCGGCAATGCATCAGCGAGGTCTGGCCACGCCGGCGTTCCCCCGGATGGC---GGCATGT
TCTCGAAGCACGACCACACCTTACCATCCGGTGACTTCCATTACCGCGCGAGAGGGGGCGCCTAGGGTGGGCACGCAGTT
GCCCCCTGGCAAATCATCCTTGGCTTATGTGTGTGGCGAATGACCGTCAACTCGGTCCAGTGATATTGTAAAACTGAATT
TAGAGTCTGTGCAATTGTGTTACTTGGGGGTTTGGTAGACAGCCCTTGTGTTTGGGGAGGGGACGATGCAGCTGCAGCTG
CA---------GCCGGTTCTCTTGTTGTGGTAGGTTTGTGTGGCATGGCAGGTGCTGCTAAGCTGGAGCCTGCTTGAACT
GTTTTCCTGTCACTTTGTTGTTTGGGGTAATAATGACCATCTTGTATGATATTAGTACTGACTT-GGAGTAAGTAATAAC
CATTCCCGGCGTGATGCATTTGCGCC-------CGTGGTGGTGTTTCTGTTGAGCCGTGTTGTTCAACGACTTGA-----
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr4B_29
AGAGGA----------------------------GAGGAGCAAGTTGCGGAGGAGGCAGCGGCAAGGGAGGAGGGGTCGC
CGGAAGGGGGACATGCTCCCTCCACATCTCACATCTCGCAGGTCTCCTCCT-----CCTCCTCCTCCGCTGCCTCTCACT
CGCTTCCCCTGCTTCTCCTCCGGGGCGCGGGCGGGCGCGCCGGCTCTGTGCCTGCCCCTGCCCGAGCTCGGCCTCCTGCC
ATTGCTGACCGGTTCCCTGGGCCGTCTGCCCGGTTTCCTGCTGGATCCGACTGGGTTCTTGCTGTTTCAATTGTTTTTCG
GCCGATTTGCCGCTCAGATTCGTGGGTGCATTCTGCTGCGGTTCAACTGTGTTTTCGTGTGTGTGTCTACAGCCTTTTGT
TATAGTTTA-------------------AGTTAAGAAAGATTAGTAGTAGTACTAGCAATACTATTACCTGGGGGTAAAC
TGAAATCTTGTTGCTTGGAGGATTTAGATGGAGTGTTGACTGTGAATTTGTTGTGATTTGCAGCTATTTCTTCAAAGTAG
CTGTTGTTGTCTGAATTTTTTTAACAGCTG--------TAAGTGGGGAGAAGAGAACCCCTGAGCTTATAAATGAGCGAT
TCGGATTTGTCTAGC-GGGGGACTAGCAAATCATCTACTCAGAGTTTGTATACTCAGTTATTAGTACACCTTGCCTTAAG
GATCAGAATTTCTGATTCAGGGACCAGGTTGATGCACAGTGCTGGTGTGATTTTTTCTTTTTACATGTGCGAGCATATAA
TTCAGTGAGTACAGCATTTGACATGTGCATCATGTCAAATTCGACCGAATCTAATTTTTTAAAGTGCACGCGGCCAGTTT
CAGTGATCC--TTTTTTTTGAGTTGCGAGGAGCAATTCTACTAGTATATCTTCATGTTTCAGCGTTTAAT---------G
TATTATTTGGACAGTATCACTTTAATCTGTTGTTGTTACTGACCTGCTGCTTACTTACATGGACAGCTTGAACTGAGAGC
AAGAGTAGAAACCCATAAGATGAGACGCAAGCAAAATATGCATGGTATTCTTCACTTCTAATGTTTCAGTTCCACTATCC
TATCCTACTTGACTGGCTATGTGCTGTATATACTGATTTCCTGCTGCTATTAGAGTTATAACATCTTTTTGTATTCCTCT
GGCAGAAAATGGCACAATCATGATTCAGTTTGGTCAGCAAGTGCCTAACTGCGAGTCCTCAGCTAGCGATTCTCCTCAAG
AAGTGTCCGGGATGAGTGAAGGAAGCTTTAATGAGCAGAATGATCAATCTGGTTCGCCCTAGACCTGCCA---ACTATTT
CTTTTCTGAATT---ACTATTCCATAATCTTGTAATATCATCTCTCCTGGAAATACAGAATGGAGTAGTCTCCAAAAATA
GTAATGGAAAGAACGATATTGATGATTGAGGACCTTGATGTGCACTTACATATCAAAGTTAGATGACATTTGTTTCCTCC
TTGTATTTAATACTAGGTAATCGCGATGGCTACACCAAG---AGTGATGAAGGCAAGATGATGTCGGCTTTGTCTCTGGG
CAATTCAGAAACAGCATACACACCCCCAAAACCTGACCGCACTCATCCCTTCGTAAGTCTCTATTATGATGCTTAAA---
-----AATTTCTGAATTCGAAGTGTTTGTTGAATGGCGAGCATGTGAATTGTGCAAGATGTTTGCTTTTTCAGGCCATAT
CATACCCATATGCTGATCCTTACTATGGTGGTGCAGTGGCAGCCTATGGCACACATGCTATTGTGAGTGATATTTCTGTC
ATCCCTGTTCCCTCACTAATTTCTGGCCTTATTTTTTTTCTGTGCTTGACGGTCTTGCTTAT--ACC----TTTGGCAAC
TGTTTGGATTTTTGTGTGCA------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------AGCATGTGCTTTAGGTATAACTG
GAATGACTGTTGAGACAAGGCAACTAAACATGATTGTGTTTAATCACACCAATTTCACTTAAAAGTCAAATTTTCAATGT
TGAGCAGCATACTGGTGGTGGCAACTTATTTTTATTTCAGA-ATCTCCATCCCCACCGCAGATTGGTTCTATTCTTTTTG
TTAGGTTTAATATGGTGCCTTTCGATGTTACTAACTCATCTTTATCTGGTGCAAAACAATTTGAATAGATGCACCCCCAG
ATGGTGGGTATGGTACCATCCTCTCGAGTGCCACTGCCAATTGAACCGGCTGCCGCCGAAGAGCCCATTTATGTGAACGC
GAAGCAATACCATGCCATTCTCCGAAGGAGACAGCTCCGCGCAAAATTAGAGGCTGAAAATAAGCTGGTCAAAAGCCGTA
AGGTATCATTTTTATGCATGATTTCATTTT--AAAAACACAAGTACTATCGTTGGCCCCATCGGC-ATCTTTTGGTTTAT
TTTCCCTGTAGTAGAAATGAATTTAGTCCACATGCACTCT-------ACATAACATAATATTCATGCCTCTGTTCAGCCG
TACCTCCACGAGTCCCGGCACCAGCACGCGATGAAGCGGGCTCGGGGGACAGGCGGGCGGTTCCTCAACGCAAAAGAGAA
GTCCGAGGCGGCCTCCGGCGGCGGCAATGCATCAGCAAGATCTGGCCACGCCGGCGTTCCTACAGACGGTGGTGGCATGT
TCTCGAAGCACGACCACACCTTACCGTCCGGTGACTTCCATTACCGCGCAAGAGGGGGCGCCTAGGGCGGGCCT----TT
GCCCCCTGGCAAATCATCCTTGGCTTATGTGTGTGGTGAATGACCGTCAATTCGGTCCAATGATATTGTAAAACTGAATT
TAGAGTCTGCAAT----TGTTACTTGGGGGTTTGGTAGACGGTCGTTGTGTTTGGGGAC-----------GCTGCAGCTG
CAGCTGCAGCTGCCGGTTCTCTTGTTGTGGTAGGTTTGTGTGGCATGGCAGGTGCTGCTAAGCTGGAGCCTGCTTGAACT
GTTTTCCTGTCACTTTG----TTGGGGTAATAATGACCATCCTGTATGATATTAGTACTGACTTGG-----AGTAATAAC
CATTCCCGGCGTGATGCATTGCGCCT--------GTGGTGGTGTTTCTTTTGAGCCATGAAGTTAAACGACTTGA-----
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr7A_100
CTG-----------------------------------------------------------------------------
----------------------CACATCTCACATCTCGCAGGTCTCCTCCT-----CCTCCC------CTGCCTCTCACT
CGCTTCCCCTGCTTCTTCTCCGGGGCCTGGGCGCGC---------------CTGATCCTGCCTGAGCTT-GCCTCCTGCC
ATTGCTGACCGGTTCCCTGGGCCATCTGGCCGGTTTCTCGCTGGATCCGACTGCGTTCTTGCTGTTTCGTTTGGGGTTCG
GTCGATTTGCCACTCAGATTCGTGGGTGCATTCTGCTGCAGTTCAACTGTGGTATCATGTGTGTCTAG-----CTTTTTG
TTTAGTTTAACTAGTATTTAAATTTATTAGTTAGGGAAGATTTGTGGTAATACTA---CT---------T--GGGTAAAC
TAAAATCTTGTTGCTTGGAGGATTTAGATGGAGTGTTAACTGTGAATTTGTTGTGATTTGCAGCTATTTCTCCAAAGTGG
C---TGTTGTCTGAATTTTTTTAACATCTGTA-----GTAAGTGGGGAGAAGAGAACCCCTGAGCTTATGAATGGGCGAT
TC--ATTTGTCTAGTAGGGGGACTAGCAAATCATCTACTGAGAGTTTGTATACTCAGTTATTAGTACACCTTGCCTTAAG
GATCAGAATTTCTGATTCAGGGACCAGGTTGATGCACAGTGCTGGTGTGATTTTTT-----TACATGTGCGGGCATATAA
ATCAGTGAGTATAGCATTTGACATGTGCATCATGTCAAATTCGACCGAATCTAAGTTTTCTAAGTGCATACGAACAACTC
CAGTGATCTTGTTCTCG----GTTGCAAGGAGCAATTCTACGAGTATCTCTTCGTGTTTCAGCGTTTACTGTATTATTAG
TATTACTTGGACAGTATCACTTCATTCTGTTGTTGTCACTGACCTGCTGCTTACTTGTATGGACAGCTTGAACTGAAAGC
AAGAGTAGAAGCCCATGAGATGAGACGCAAGCAAAATATGCATGGTATTCTTCACTTCTAATATTTCAGTTCCACTATCC
TG--CTGCTTACCTGGCT--------------------------------------------------------------
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>SNPs
-------------------------------SSS----------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
-----------S--------------------------------------------------------------------
---------------------------------S-------S-------S------------------------------
----------------S--------------------------------------------------------S------
-------------------S---------S-----------------------------S--------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------S-----------
--------------------------------------------------------------------------------
-S-----------------------------------------------------------S------------------
------------SSS------------------S----------------------------------------------
-----------------SS-------------------------------------------------------------
--------------------S--------------------------------------------S--------------
--------------------------------------------------------------S----------------S
--S-----------------------------------------------------------------------------
----------------------------------------------------------------S----------S--S-
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------S-------------------------------------------------------------S---------
------------------S----------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------S-----------------------------
---------------------------------------------------------------------S--S-----S-
-----------------------------SSS-------S----------------------SS-S---------S--S-
-SS--S-------S----------------S---------SSSSSSS---------------------S-----------
-----------------------------------------S-----------------------------S--------
----------------------------------------S-----S--------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
---------------------------------S----------------------------------------------
------------------------------------------------------------------------S------S
---------------------S--SSSSSSSSS-----S-------------S------S---S----S------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_33
-------------CTTGCAGAGGAGAGGAGACG-----------------------------------------------
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-----------------------------------------------------------
>reverse_1836
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------ATGCC
ATCCCTGTTCCCTCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>forward_354
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CAGATTCGTGGGTGCATTCC----------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1839
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CC
ATCCCTGTTCCCTCACTA--------------------------------------------------------------
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>forward_1825
--------------------------------------------------------------------------------
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---------------------------------------------ATGGCGCACATGCTATTGTA---------------
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>reverse_3695
--------------------------------------------------------------------------------
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--------------CTGGAGTACTCGACATCGCC----------------------------------------------
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-----------------------------------------------------------
