>input_sequence_45763
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----------------------------------------------------ATGCGCCGGAAGCTCGCGCTCCTCGCCG
CCGCCGCCGGTGG---CGCCGCGCTTCCTCTCTCGTGGGCGAAGCAGTCCCACGCGCGCCTTATCGTCGCCTCCCCTCGC
ATCCCCGACGACCTCCGCCTCTGCCTCCTCCGATCCTACGCCGCGCACGGCGAGTTCGCGTCGGCGCACCGCCTGCTCGA
GGAAGCACCCCGCCCGGCCTCGCCGCTCCTCTACAACGCCGTCATACGCGCCCACTCCCGCCGCCTAGACCTCCCCACTG
CTCTCGCCTTCTTCGCCAGCATGCGACGCTCCGCCACCCCGCCCGACGCCCACACCTTCGCCTGCGTCCTCCGCGCATGC
GCCGACTGTGATCGGCCGGCGGCCGCCAAGATCCTCCATGGTCTCGCGTTATCTTCCGGATGGTCCTCCCATCCAATCGT
CGGCAGTGCGCTCGTTAGCGCGTACTCAAAGTTCTTGTTCGTGGACAGTGCTCGCCGCGTGTTTGATGGTTTGCGTGAAC
CGGACCTGGTTCTCTGGAACTCAATGATGTCCGGGTATGGGTACAGGGAAATGTGGCTTGAGGGGATTCAACTGTTTTCG
GCAATGCGTAGGGCTGGGGAGGAACCGGACGGCTACTCGATGGTCAGCTTGCTCTCATCCTTCTGGGATCCTGAAGCGCT
TGCTTTTGGTCAAGCAGTTCATGGAGTGTGTATCAAGGGCGGTTATGATTCTGGCCACCATGTGAGAAGCACACTTGTTA
GCATGTACTTCAGGTGCGGCTGCGTGGAATCGGGTCAAACCTTGTTTGGTAGTTTGCTGGATGCGGACTTGGTTACATGT
TCTTCACTCATTACAGGGCAATTGCAGACTGGCAAGTATGATGAGTCATTTGATTTGTTCAGAGAAATGTGCTACTTTGG
CAGGAGGCCTGACAGCATCTTGATTGCTAGTCTTCTTTCGGCATGTGCTTCTACAGCCACTATCAGCTACAGCAAGGAGA
TCCACTGTTATGCAGTCAGGGTTGGCGCTGATAAAGACATCAAAGTCTCATCTTCGTTAATGGATGCTTATGCAAAATGT
GGTTTTGCTGAGCTGGGATATTTGGTATTCCGCCAAATTCCTAAGAAGAACTCAGTCATGTACAATATGGTCATATCAAA
CCTTGGTTCTCACGGATTTGCGATGAAGGCCATTGAAGTCCATGATGAGATGGTCCGTGATAAGCTCAGGCCTGATGGTG
CTACCTTCTCAGCTTTACTTGCTGCTTGTTGTCATGCAGGACTCCTAGACGACGGATGGAAGTTGTTTAGGAGAATGAGG
GATGAGTTCCACATAGTAGTTCAAATGCAGCATTATGTCTACATGGTGAGGCTTCTTGCAACGTTTAACCAGCTGAAGGA
GGCCTATGATCTTATACAGACAATGCCAATGCCACCCGATTGTGGCGTGTGGGGTGCATTACTTTGGGGGTGTTGTCTCC
ACCGTGATTCCAGCCTTG-------GTAGGGCAGTTGCTGAAAAGCTCTGTGAGTTGTATCCAGACAAGGCTTCTTACAA
GATTATGCTTTCAAACTTGTATGCATCAGAGGAGATGTGGTGGGATGCTGAGGAGGTCAGGACCGAGATGTTGAAAGAAT
ATATGAACAAGAACACAGGGATAAGTTGGGTTGGGGATACAAGGAAATGA------------------------------
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>chr3B_1_TraesCS3B01G403000
TACATTCTTTTTAATTAGTATAGATAAAATAAATAAAA-TTATATATTTGATAAACACTTCTTTGATAACAACTTATTAA
TGTATCAAGAAAAATAAAAGAAATATTTCATAGATAAATAGAAGGTGGGCAGTTGGTTTTCATGAAACCCAGTGGAAAAA
AACAAATATGAAAAAAAATCAAAACAG-AGAGGAAGGGATGATAATATAGACAAGGTTGGATGAAGGATTAGCGGACAAC
AAAACCTTGCTCAAAACAATTTATTCTACATAAAAATTAAGATTCCTCAAGGAAAAAAGAAAGA----------------
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------------------------ACCAAATGGAGGGTCACAACGACTTTTTTTTTGACGTGGTGGCCATAAGCTCATAA
CCCACGACATGTAAAGAGAGAGAGA----TGAGAAGAAGGAGGATGTCGGTTCCTTTTGATTAATTCGGTTGTCTCTTCC
CTACACGAAGCCCTAGTCTAAGATTGGCTCTGGGTATTATCTTTGATGAATTATTTCCCCTCTTCTTTTA-TGAAAATCA
CAGAGCTCCTATTTTTTTATTTG-AAAAAGAAAATCCGTTTGGAAAGGAGTATAACTGTTGGTTCATTTTGATATGTTTG
GTTCTTTCATGAAAGACTCAATTACTAGTTGATAAAATAAATAGCACTGAGAATAAAAA---------AAACTTTTGAAA
ATAAAATAACAGATTGATTCTCCATTACTACAAAAGTTGCACTTGGAGCTCCCTTGTTATCAAATGCATCAATATGAAAC
ATGTGAAAGAAATTTTGTTTTGAACACGGATTCAATGGTACTTTTTTAGTCTGGAATTATTTGTCGCTCAAATAGATGTA
TCTACGTAAGTTCTACGTATGATTTTAGGACTGTATTTTTTAGGACTCATACAGTCATTATAGTTTTAAATTTTTTTCTG
TGATTTA-------------------------------------------------------------------------
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-------------------AAAC---------------------------------------------------------
---------------------------------------GTACGTCATGAATCCAACGCTTGA-----------------
--------------------------------------------------------------------AACTGCTTCAGG
AGAAGCAG--CCTTCGCCCGGCCGGGAGAGGCGCCAGTCATTAGTCCATGGTATGCGCCGGAAGCTCGCGCTCCTCGCCG
CCGCCGCCGGTGG---CGCCGCGCTTCCTCTCTCGTGGGCGAAGCAGTCCCACGCGCGCCTTATCGTCGCCTCCCCTCGC
ATCCCCGACGACCTCCGCCTCTGCCTCCTCCGATCCTACGCCGCGCACGGCGAGTTCGCGTCGGCGCACCGCCTGCTCGA
GGAAGCACCCCGCCCGGCCTCGCCGCTCCTCTACAACGCCGTCATACGCGCCCACTCCCGCCGCCTAGACCTCCCCACTG
CTCTCGCCTTCTTCGCCAGCATGCGACGCTCCGCCACCCCGCCCGACGCCCACACCTTCGCCTGCGTCCTCCGCGCATGC
GCCGACTGTGATCGGCCGGCGGCCGCCAAGATCCTCCATGGTCTCGCGTTATCTTCCGGATGGTCCTCCCATCCAATCGT
CGGCAGTGCGCTCGTTAGCGCGTACTCAAAGTTCTTGTTCGTGGACAGTGCTCGCCGCGTGTTTGATGGTTTGCGTGAAC
CGGACCTGGTTCTCTGGAACTCAATGATGTCCGGGTATGGGTACAGGGAAATGTGGCTTGAGGGGATTCAACTGTTTTCG
GCAATGCGTAGGGCTGGGGAGGAACCGGACGGCTACTCGATGGTCAGCTTGCTCTCATCCTTCTGGGATCCTGAAGCGCT
TGCTTTTGGTCAAGCAGTTCATGGAGTGTGTATCAAGGGCGGTTATGATTCTGGCCACCATGTGAGAAGCACACTTGTTA
GCATGTACTTCAGGTGCGGCTGCGTGGAATCGGGTCAAACCTTGTTTGGTAGTTTGCTGGATGCGGACTTGGTTACATGT
TCTTCACTCATTACAGGGCAATTGCAGACTGGCAAGTATGATGAGTCATTTGATTTGTTCAGAGAAATGTGCTACTTTGG
CAGGAGGCCTGACAGCATCTTGATTGCTAGTCTTCTTTCGGCATGTGCTTCTACAGCCACTATCAGCTACAGCAAGGAGA
TCCACTGTTATGCAGTCAGGGTTGGCGCTGATAAAGACATCAAAGTCTCATCTTCGTTAATGGATGCTTATGCAAAATGT
GGTTTTGCTGAGCTGGGATATTTGGTATTCCGCCAAATTCCTAAGAAGAACTCAGTCATGTACAATATGGTCATATCAAA
CCTTGGTTCTCACGGATTTGCGATGAAGGCCATTGAAGTCCATGATGAGATGGTCCGTGATAAGCTCAGGCCTGATGGTG
CTACCTTCTCAGCTTTACTTGCTGCTTGTTGTCATGCAGGACTCCTAGACGACGGATGGAAGTTGTTTAGGAGAATGAGG
GATGAGTTCCACATAGTAGTTCAAATGCAGCATTATGTCTACATGGTGAGGCTTCTTGCAACGTTTAACCAGCTGAAGGA
GGCCTATGATCTTATACAGACAATGCCAATGCCACCCGATTGTGGCGTGTGGGGTGCATTACTTTGGGGGTGTTGTCTCC
ACCGTGATTCCAGCCTTG-------GTAGGGCAGTTGCTGAAAAGCTCTGTGAGTTGTATCCAGACAAGGCTTCTTACAA
GATTATGCTTTCAAACTTGTATGCATCAGAGGAGATGTGGTGGGATGCTGAGGAGGTCAGGACCGAGATGTTGAAAGAAT
ATATGAACAAGAACACAGGGATAAGTTGGGTTGGGGATACAAGGAAATGATGGTTGGGTTTGCATCATTGAGAAATATGC
CGAACGTCAAGTACATTTGAACTCTGTATTGTTATGGTTTTAGAGAAATGAAATATCTGAAATTGCTTCAAAACTTCCTA
TTTTTTTACCTTACCATTTGAC-AAAAAATATTTTCTTGCTTTTTATTATTTGTGTAGAATTATTTCTGCTGTTGCTGAG
TACAAATATAAATTTTAGTATATATCCATGGAACTTTGTGTTGCTAATTTCTTAGTTGTTGATGTCGTGGAGTAATATAA
GGTCGGAACGTAATATCTGAAGCACTCTTTCTAGTGGAGTCCTGTATTTTTCTTGCCTGGCTCACTTGCCTGTATCCCCT
TGTTAGCTATATATAGGTGTCATGTTAGCAATTCTGTAGTATTATATAAAGATCACTGCTTTGCAAAAAGTATTGTATGG
TGCTTAATCTTATATCACTTCTGTTTATTTCTTCTATAAAACCCTGTGAAAGACATATTAACCCTTTGTTCCAGTCTAGC
AATTTGCTACACAGATTTACTAAGTATTTCTAGATTGGCAACAAATTATTGTGACACATCATTTTAGTAGTTAAGTAGGC
TGCCCTCACACAGAATTGATAATCTCTTACAATATTTTTTGAAAGAAAGTAGAT-CTCACATGTCGAAATGATATAATCA
GCACAACTTTTTCATTTTATGGTTCTGTGGCGATATTTAACG--TATATATCTTCACTTCTTAGTGCTTGGATGATGGAG
TTGAGGCTTAGTCAAGTAGTCAACTGTAGTTGTGCTGGTGCAATGAGATCTTTTAAAGAAAGCCAAAGAG--AGAAAAAA
AATGGATTTTCTTTAATTGGTCTACTTATCCTAAAGGCTGCAGCAAGCAGTGGTAGAAGCAAAGTTGGAATTTACCTTAG
GTGTCAGAACTGTACTATTGTTTTGGTAGAAGATACTTG------TCATGTGTCAGGTTTATAAGAGTAATACTCTTAGC
TAGGTCGGTTTGAGCAAGTCCT
>chr3A_1
TACACTCTTTTTAATTAGTATAGATAAAATAAATAAGATTTATATATTTGATAAACACTTCTTTGATAACAACTTATTGA
CGTATCAAAGAAAACAAAAATTAGTTGATAGACACG--TAGAAAGTGGGCAGTTGGTTTTCATGAAACCCCGTGCAAAG-
AACAAGTGTGAATAAAAGAAAAACATAAAGAGAAAGGGATGAGAATATAGATAAGTTTGGACGAAGGAGTAGCGGACAAC
AAAACCTTACTCAAAACAATTTGTTCTACAC-AAAAGTAAGGTTATTCAAGGAAAAGGAAAAGACAAAACAGTCTTGGCT
GATTTTGCATGGCACAAGTGCTTTTTCGCTAGAAGAAAGTGCAACAAATTAGCTCATGAGATTGCGGCTACTGACAGGCG
GACATGTGACATCTTCATTACTGACGTGCTTGAAAGTCTCAATGCCCTGATGTCGTTGGAGTGTAAACATCCCATTGAGT
AAATTTACTCATGTTTTTTTAAAGACAAAATGGAGGGTGACAACAACATTTTTTGATATGGCT---CCAGAAGCTCATAA
CCCTCGACATGTAAAGAGAAAGAGAGAGATGAGAAGGAGGGGGGTGATGGTTCATTTTGATTCATTCGGTG--CTCTTCT
CTAGGCAAATCCCTAGTATAAAATTGGCTTTGTGTATTATCTTTGCTGAATTATATCCCCTCTCCTATTAATGGAAGTCA
CCGAGCTCCTGTTAATTTTTTGAAAGAAAAAATATCTGTTTTGAAAGGAG--TAATTGTTGGTTCATTTTGATACGATTG
GTTCTTTCATGAAAGACTCAAT---TAGTTGATAAAATAAATATCAATGAGAATTAAAA---------AAACAAA-----
----AAAAACAGAATGATTCTTCATTACTACAAAAGTTGCACTTGAAGCTCTC---TCGTCAGATCCAATTATATGAAAC
AAGTGAAAGAAATTTTGTTTCGGACACAAATTCAATGATACGTTCTTTGTCCGGAATTATTTGTCGCTCAAATAGATGTA
TCTACGTAAGTA-GATTTCTAGGACACATC--------------ACTCATACAATCATACTCTTGATTTTA-TTTATTTT
TGATTAA-------------------------------------------------------------------------
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-------------------AAACAATGCGGTGATAGGTAAATACTCCCTCTGTTTCTTAAATATTTGTTTTTCTAGAGAT
TTTAACAAGTGACTACATACAGAATAAAATGAGTGAACCTATATTTTAGAATATGTTTATCCATATGTGATAGTTCATTT
GAAATCTCTGAAAAAGACAGATATTTTGAAACGGATGAAGTACTTTACTAATAAGTATCCAACGGTTGAACTGCTTCAGG
AGAAGCAGGGCCTTCGCCCGGCCGGAAGAG--GCCAGTCATTAGTCCATGGTATGCGCCGGAATCTCGCGCTCCTCGCCG
CCGCCGCCGGTGGTGGCGGCGCGCTCCCTCTCCCGTGGACGAAGCAGTCTCACGCGCGCCTTATCGTCGCCTCCCCTCGC
ATCCCCGATGACCTCCGTCTCCGCCTTCTTCGATCCTACGCTGCGCACGGCGAGTTCGCGTCGGCGCACCGCCTGCTCGA
CGAAGCACCCCGCCCGGCCTCGCCGCTCCTCTACAACGCTGTCATACGCGCCCACTCCCGCCGCCTAGACCTCCCCACCG
CTCTCGCGTTCTTCGCCAGCATGCGACGCTCCGCCACCTCGCCCGACGCCCACACCTTCGCCTGCGTCCTCCGCGCATGC
GCCGACTGTGATCGGCCAGCCGCCGCCAAGGTCCTCCATGGCATCGCGTCATCTTCCGGCTGGTCCTCCCATCCAATCGT
CGGCAGCGCGCTCGTCAGCGCGTATTCAAAGTTCTTGCTCGTGGACAGTGCTCGCCATGTGTTTGATGGTTTGCGTGAGC
CGGACCTGGTTCTCTGGAACTCAATGATGTCCGGGTATGGGTATAGGGAAATGTGGCTTGAGGGGCTTCAACTGTTTTCT
GCGATGCGCAGGGCTGGGGAGGAACCAGACGGCTACTCGATGGTCAGCTTGCTCTCATCCTTCTGGGATCCAGAAGCGCT
TGCTTTTGGTCAAGCAGTTCATGGAGTGTGTATCAAGGGCGGTTATGATTCTGGCCACCATGTGAGAAGCACACTTGTTT
CCATGTACTTCAGGTGCGGCTGCGTGGAATCGGGTCAAACCTTGTTTGGTAGTTTGCTGGATGTGGACTTGGTTACATGT
TCTTCACTAATTACAGGGCAATTGCAGACTGGCAAGTATGATGAGTCATTTGATTTGTTCAGAGAAATGTGCTACTCTGG
CAGGAGGCCTGACGGCATCTTGATTGCTAGTCTTCTTTCGGCATGTGCTTCTACAGCCACTATCAGCTACAGCAAGGAGA
TCCACTGTTATGCAGTCAGGGTTGGCGCTGATAAAGACATCAAAGTCTCATCTTCGCTGATGGATGCTTATGCAAAATGT
GGTTTTGCCGAGCTGGGATATTTGGTATTCCGCCAAATTCGTAAAAAGAACTCAGTCATGTACAATATGGTCATATCAAA
CCTTGGTTCTCATGGATTTGCGATGAAGGCCATTGAAGTCCATGATGAGATGGTCCGTGATAAGCTCAGGCCTGATGGTG
CTACCTTCTCAGCTTTACTTGCTGCTTGTTGTCATGCAGGACTCTTAGACGAAGGATGGAAGTTGTTTAGGAGAATGAGG
GATGAGTTCCACATAGTAGTTGAAATGCAGCATTATGTCTACATGGTGAGGCTTCTTGCAACGTATAACCAGCTGAAGGA
GGCCTATGATCTTATACAGACAATGCCAATGCCACCAGATTGTGGCGTGTGGGGTGCATTACTTTGGGGGTGTTGTCTCC
ACCGTGATTCCAGCCTTG-------GTAGGGCAGTTGCTGAAAAGCTCTGTGAGTTGTATCCAGACAAGGCTTCTTACAA
GATTATGCTTTCAAACTTGTATGCATCAGAGGAGATGTGGTGGGATGCTGAGGAGGTCAGGACCGAGATGTTGAAAGAAG
ATATGCACAAGAACACAGGGATAAGTTGGGTTGGGGATACAAGGAAATGATGGTTGGATTTGCATCATTGAGAAATATGC
CGAACGTCAAGTACAATTGAACTCTGTATTGTTCTGGTTTTAGAGAAATGAAATATCTGAAATTGCTTGAAACTTCCTA-
-TTTTTTACCTTACCATTTGACAAAAAAATATTTTCTTGCTTTTTATTATTTGTGTAGAATTATTTCTGCTGTTTCTGAG
TACAAAAATAAATTTTAGTATATATCCATGGAACTTTGTGTTGCTAATTTCTTAGTTGTTGATGTCGTGGAGTAATATAA
GGTCGGAATGTAATATCTGAAGCACTCTTTCTAGTGGAGTCCTGCATTTTTCTTACTTGGTTCACTTGCCTGTATCTCCC
TGTTAGCTATATATAGGTGTCATGTTAGCAATTCTGTAGTATTATATAAAGATCACTGCTTTGCAAAAAGTATTGTATGG
TGCTTAATCTTGTATCACTTCTGTTTATTTCTTCTATAAAACCCTGTGAAAGACATATTAACCCTTTATTCCAGTCTAGC
AATTTGCTACACAGATTTATTGAGTATTTCTAGATTGGCAACAAATTATTGTGACACATCATTTTAGTAGTTAAGTAGGC
TGCCCTCACACAGAATAGATAATCTCTTACAATATTTTTTGAAAGAAAGTAGAT-CTCACATGTCGAAATGATATAATCA
GCACAACTTTATCATTTTATGGCTC--TGGCGATATTTAACGTATATATATCTTCACTTCTTAGTGCTTG-ATGATGAAG
TTGAGGCTTAGTCAAGTAGTCAACTATAGTTGTGCTGGTGCAATGAAATCTTTTAAAGAAAGCCAAAGAG--AG--AGAA
AATGGATTTTTTTTAATTGGTCAACATATCCTAAAGGCTGCAGCAAGCGGTGGTAGAAGCAAGGTTGGAATTTACCTTAG
GTGTCAGAACTGTACTATTGTTTTGGTAGAAGATACTTGTTACTCTCATGTGCTAGCTTTATAAGAGTAGTACTCTTAGC
TAGGTCGGTTTGATCAAGTCCT
>chr3D_557
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--------------------------------------------AAGGAG--TAATTGTTGGTTCATTTTGATACATTTG
GTTCTTTCATGAAAGACTCAAT---TAGTTGATAAAA-AAATAGCACTACGAATTAAAATGACATTTGAAAATAG-----
----AATAATAGACTGATTCTCGGTTACTACAAAAGTTGCACTTGAAGCTCTC---TTGTCAAATCCAATTATATGAAAC
-----AAAGAAATTTTGTTTTGAACACGGATTCAATGGTACTTTCTTTGTCCGGAATTATTTGTCGCTTAAATAAATATA
TCTACCTAAGTGTGATTTTTAGGACACATC--------------ACTCATACAGTCATAGTCTAGTCACACTCTTGATTT
CTTTGTCATTTATTAATATTTTCCTTTATGGGGAGTGCTACGCGTCGGCTGGTGGATCTTTTCAAAAGATCCGCTGCCTC
GCGAGCCGTCCGATCTAGGTTGCTCACCTTACGATCGCTCTTTACAACAAGAGTATTGACTATTGAAACAAGAGCTTTGT
TTCAAAAACACGTCGGTAACTATTGCAACAAGAGCTTTGTTTCAGAAGCACGTTGGTGACTATTGAAACAAGAGCTTTGT
TTCGGAAACATATCGGTGACTATTGCAACAAGAGCTTTGTTTCAGAAACATTGGTGACGTTGCAAATCTCTCCGTGCATG
ATCCCTCTTTACAACAAAAGCTTTGTTTTATAAACATTGTTGACTATTGCAACAAGACCTATGTTTCAGAAACATTGATG
GTGTTGCAAAAGCATCTACGAACGGTGCTTAACCCCCAAATGCCTCACCATGGATGGTGATAGCCTGCCGCCGGCCCATA
AACACGCCACACAGGGCTGGGAGGGATCCATCAATGAGGGCTCCCTCGACATCGACAACGTCGACGAAGAGGCCGTGCGT
TGCGCCACAACACCAGGGGAGCTCGCGCCCGAAGCTTCTGCATCGCCCGGTGATCCCGCTGCCCACCGGCGCCTCCTTCC
TCCCTTTCTCTGCTCCAACTCGCCATGCCGCTCCTCTCCCATGACCCACCTCTCTCTCTCTCTCGCCTCCTTCTCCTCTT
CACAGGAACCGTGCAGCCGTCGTCGAGTCCTTCGCCTCCGACTGCTTTCCCGGTGAGCTCGGGCCAGATCCGCCGCCCAG
GGCAGGAGAGAACTGAGCGGCGGGGCGACCGGCTGGCCGGTGTGAGCGGCAGCGGCACCCAGCTTCCAACGCCCCCGTCC
ACTCTGCAACATGAGAGAAGCGATGCGAGAGAATAGAGTGGGAGAAAAGTTGGCGTTGGTTTAGAAATCGGGTGAAGGTG
GAGACGTGCATCAGGCCCACATGGACACGTGTTGCACAACGAAGGAGGCGGACGCGAAGTTTCTTTTCAGTCGGTTGACA
CCGAATGTTTTCCTTTATTAAAACGTGTGATGATAGATTAGTACTTCATGTGTAAACTAATATAATAAAAGCGTTTAGAT
CACTACTACACGTTCTTATAGTATTTCTTTACCGAGAGAGTACGTCGTAAATCCAACGCTTGA-----------------
--------------------------------------------------------------------AACTGCTTCAGG
AGAAGCAG--CCTTCGCCCGGTCGGAAGAG--GCCAGTCATTAGTCCATGGTATGCGCCGGAAGCTGGCGCTCCTCGCCG
CCGCCGCCGGTGGCGGCGGCGCGCTCCCTCTCTCGTGCGCGAAGCAGTTCCACGCGCGCCTTATCGTCGCCTCCCCTTGC
ATCCCCGACGACCTCCGCCTCCGTCTCCTTCGATCCTACGCTGCGCACGGCGAGTTCGCGTCGGCGCACCGCCTGCTCGA
CGAAGCACCCCGCCCGGCCTCGCCGCTCCTCTACAACGCTGTCATACGCGCCCACTCGCGCCGCCTAGACCTTCCCACTG
CTCTCGCGTTATTCGCCAGCATGCGACGCTCCGCCACCCCGCCCGACGCCCACACCTTCGCCTGCGTCCTCCGCGCATGC
GCCGACTGTGATCGGCCGGGCGGCGCCAAGACCCTCCATGGTATTGCGTCAACTTCCGGCTGGTCCTCCCACCCAATCGT
CGGCAGTGCGCTCGTTAGCGCATATTCAAAGTTCTTGCTCGTGGAGAGTGCTCGCCATGTGTTTGATGGTTTGCGTGAGC
CGGACCTGGTTCTCTGGAACTCAATGATGTCCGGGTATGGGTACAGGGAAATGTGGCTTGAGGGGCTTCAACTGTTTTCT
GCGATGCGTAGGGCTGGGGAGGAACCAGACGGCTACTCGATGGTCAGCTTGCTCTCATCCTTCTGGGATCCAGAAGCGCT
TGCTTTTGGTCAAGCAGTCCATGGAGTGTGTATCAAGGGCGGTTACGATTCTGGCCACCATGTGAGAAGCACACTTGTTA
GCATGTACTTCAGGTGCGGCTGCGTGGAATCGGGCCAAACCTTGTTTGGTAGTTTGCTGGATGCGGACTTGGTTACATGT
TCTTCACTCATTACAGGGCAATTGCAGACTGGCAAGTATGATGAGTCATTTGATTTGTTCAGAGAAATGTGCTACTTTGG
CAGGAGGCCTGACAGCATCTTGATTGCTAGTCTTCTTTCGGCATGTGCTTCTACAGCCACTATCAGCTACAGCAAGGAGA
TCCACTGTTATGCAGTCAGGGTTGGTGCTGATAAAGACATGAAAGTCTCATCTTCACTAATGGATGCTTATGCAAAATGT
GGTTTTGCTGAGCTGGGATATTTGGTATTCCGCCAAATTCCTAACAAGAACTCAGTCATGTACAATATGGTCATATCAAA
CCTTGGTTCTCACGGATTTGCGATGAAGGCCATTGAAGTCCTTGATGAGATGGTCCGTGATAAGCTCAGGCCTGATGGTG
CTACCTTCTCAGCTTTACTTGCTGCTTGTTGTCATGCAGGACTCCTAGACGAGGGATGGAAGTTGTTTAGGAGAATGGGG
GATGAGTTCCACATAGTGGTTGAAATGCAGCATTATGTCTACATGGTGAGGCTTCTTGCAACGTTTAACCAGCTGAAGGA
GGCCTATGATCTTATACAGACAATGCCAATGCCACCAGATTGTGGCGTGTGGGGTGCATTACTTTGGGGGTGTTGTCTCC
ACCGGGATTCCAGCCTTG-------GTAGGGCAGTTGCTGAAAAGCTCTGTGAGTTGTATCCAGACAAGGCTTCTTACAA
GATTATGCTTTCAAACTTGTATGCATCAGAGGAGATGTGGTGGGATGCTGAGGAGGTCAGGACCGAGATGTTGAAAGAAG
ATATGCACAAGAACACAGGGATAAGTTGGGTTGGGGATACAAGGAAATGATGGTTGGGTTTGCATCATTGAGAAATATGC
CGAACGTCAAGTACATTTGAACTCTGTATTGTTATGGTTTTAGAGAAATGAAATATCTGAAATTGCTTGAAACTTCCTA-
-TTTTTTACCTTACCATTTGAC-AAAAAATATTTTCTTGCTTTTTATTATTTGTGTAGAATTATTTCTGCTGTTGCTGAG
TACAAAAATAAATTTTAGTATATATCCATGGAACTTTGTGTTGCTAATTTCTTAGTTGTTGATGTCGTGGAGTAATATTA
GGTCAGAACGTAATATCTGAAGCACTCTTTCTAGTGGAGTCCTGCATTTTTCTTGCC---TTCACTTGCCTGTATCCCCT
TGTTAGCTATATATAGGTATCATGTTAGCAATTCTGTAGTATTATATAAAGATCACTGCTTTG-------------ATGG
TGCTTAATCTTATATCACTTCTGTTTATTTCTTCTATAAAACCCTGTGAAAGACATATTAACCCTTTGTTCCAGTCTAGC
AATTTGCTACACAGATTTTTCAAGTATTTCTAGATTGGCAACAAATTATTGTGACACATCATTTTAGTAGTTAAGTAGGC
TGCCCTCACACAGAATTGATAATCTCTTACAATATTTTTTGAAAGAAAGTAGAT-CTCACATGTCGAAATGATATAATCA
GCACAACCTGATCATTTTATGGCTCTGTGGCGATATTTAACG--TATATATCTTCACTTCTTAGTGCTTGGATGATGAAG
TTGAGGCTTAGTCAAGCAGTCGACTGTAGTTGTGCTGGTGCAATGAGATCTTTTAAAGAAAGCCAAAGAGTAAG--AAAA
AAAGGATTTTCTTTAATTGGTCAACTTATCCTAAAGGCTGCAGCAAGCAGTGGTAGAAGCAAAGTTGGAATTTACCTTAG
GTGTCAGAACTGTACTATTGTTTTGGTAGAAGATACTTATTACTCTCATGTGCTAGCTTTATAAGAGTAGTACTCTTAGC
TAGGTCGGTTTGAGCAAGTCCT
>chr3D_1042
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----------------CGCCGCGCTCCCTTTCTTGTGCACGAAGCAGTTCCACGCACGCCTTATCGTCGCCTCCCCTTCC
ATCCCCGACGACCTTCGCCTCCATCTCCTCCGATCCTATGCTGCGCACGGCGAGTTTGCGTCGGCGCCCCACCTGCTCGA
CGAAACACCCCGCCCGGCCCCGCCGCTCCTCTACAACACTGTCATGCGCGCTCACTCCCGCCGCCTAGACGTCCCCGCCG
CGCTCTCGTTCTTCGCGGGCATGCGACGCTCCGCCACCCTGCCCGACGCCCACACCTTCGCTTGCGTCCTCCGCGCATGC
GCCGGCTGTTCTCGGCCGGGCGCCGCCAAGATCCTCCATGGTATTGCGTCATCTTCCGGCTGTTCCTCCCATCCAATCGT
CAGTAGTGCGCTCGTTAGCGCATATTCAAAGTTCTTGCTTGTGGACAGTGCTCGCCATGTGTTTGATGGTTTGCGTGAGC
CCGATTTGGTTCTCTGGAACTCAATGATGTCCGGGTATGGGTACAGGCAAATGTGGCTTGAGGGGCTTCAACTGTTTTCT
GCAATGCTCAGGACTGGGGAGGAGCCAGATGACTACTCCATGGTCAGCTTGGTCTCGTCCTTCAGGGATCCAGAAGCTCT
TGCTTTTGGTCAAGCAGTTCATGGAGTGTGTATCAAGGGCGGTTATGATTCTGGCGACCATGCGAGAAGCGCACTTGTTA
GCATGTATTTCAGGTGCGGGTGCATGGAATCGGGTCAAACATTGTTTGGTAGTTTGCTGGATGCGGATTTGGTTACATGT
TCTTCACTAATTACAGGGCAAGTGCAGAGTGGCAAGTATGACGAGTCATTTAATTTGTTCAGAGAAATGTGCTACTTCAG
CAGGAGGCCTGACAGCATCTTGATTGCTAGTCTTCTTTCAGCGTGTGCTTCTACAGCCACTATCAGCTGTAGCAAGGAGA
TCCACTGTTATGCAGTCAGGGTTGGAGCTGATACAGACACCAAAGTCTCATCTTCACTAATGGATGCTTATGCAAAATGT
GGTTTTGCTGAACTGGGATATTTGGTATTCCGCCAAATTCCTAATAAGAACTCAGTCATGTACAATATGGTCATATCAAA
CCTTGGTTCTCACGGATTTGTAATGAAGGCCATTGAAGTCCATGATGAGATGGTTCGTGATAAGCTCAGGCCTGATGGTG
CTACCTTCTCAGCTTTAGTTGCTGCTTGTTGTCATGCAGGACTCCTAGATGAGTGATGGAAGTTGTTTAGGAGAATGAGG
GATGAGTTCCACATACTGGTTGAAATGCAGCATTATGTGTACATACTGG------TTGCAACATTTAACCAGCTGGAGGA
GGCCTATGATCTTATACAG-CAATGCCAATGCCAGCAGATTGTGGCGTGTGGGGTGCATTACTTTGGGGGTGTTGTGCCC
ACCGTGATTCCAGCCTTGGTAGTTGGTAGGGCAGTTGCTGAAAAGCTCTTTGAGTTCTATCCAGATAAGGCTTCGTACAA
GATTATGCTTTCAAACTTGTGTGCATCACAGGAGATATGGTGGGATGCTGAGGAGGTCAGGTCCGAGATGTCGAAGGAAG
ATATGCACAAGAACACAGGA--AAGTTGGGTTGGCGAAATGAGGAAATGATGGTTTGGTTTGCATCATTGAGAAATGTGC
AGAACATCAAGTACATTTAAACTCTGTATTGTTATGGTTCTAGAGAAATGAAATATCTGAAACTTCCTA-----------
--TTTTTACCTTACCATTTGATAT-AAATTATTTTCTTACTTATTATTATTTGTGTTGAAT-ATTTTTGCTCTTGCTGAG
TATAAAAATATTTTTTAGTGTATATCCATGGAACTTTGTGTTGCTAATTTCTTAGTTG---ATGTTGTAGAGTAACA---
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--------------------------TTACAATATTTTTTGAAAGAAAGCAGATTCTTACATCTCAAAATGATATAATCA
GCAGT--TTTATCATTTTATGGTTCTGTGGCGATATTTAACG--TATATACATTTACTTCTCAGTGCTTGGATAATGAAG
TTGAGACTCG--------GTCAACTATAGCTGTGCTGGTGCAATGAGATTTTTTTATAGATAACCGAAGAG----AAAAA
AATGGATTTTCTTTAATTAGTCAACTTATC--------------------------------------------------
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----------------------
>SNPs
----S-------------------------------S-----------------------------------------S-
S-------SS----S----SSS-SS-SSS-S-S-SSSS-----S--------------------------S---S---SS
-----S-S----S----SSS---SSSS-----S---------S--------S---S-----S------S-----------
--------S-------------S-------SS----S----S--SS----------SSS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------S-----S--S------SSS-S-SSSSSS---S----------
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----------------------
>forward_936
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------------------------------------TTGCACTTGGAGCTCCCTTG------------------------
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--------------------------GGACGGCTACTCGATGGTC-----------------------------------
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----------------------------------------------GGAAATGTGGCTTGAGGGGA--------------
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>reverse_4461
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------------------------------------------------------------CTCACTTGCCTGTATCCCCT
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
