>input_sequence_45753
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ATGGGCACCATGACTCTGCCGCCCGGCTT
CAGGTTCCACCCCACCGACGACGAGCTCGTCGGCTACTACCTCAAGCGGAGGGTCGACAACCTCAAGATCGAGCTCGAGG
TCATCCCCGTCATCGACCTCTACAAGTGCGAGCCATGGGAGTTGCCAGGTACATACATA-ACGTGCATCTTCTATCCGAT
TCATTCTGTATTT----CAACATGCCACACGTTCATTCATGCTTCGGCCGACAAAAAAAGTGTGCGAGAGAGAGAGTTGA
A-----TTTTAGCTATGTCAAACCGCATGGTGTTCACCTCTCCTTTCCCCCTGAATAGACAATTTATTTGATAAGTAATA
ATTTGCAATCATCCTCGAATAGCATAATTCTTTTAGAAAAAGAATCTGCCCTCCAAATTGCTTGCTAGCTAGCCAGCATA
CACGAAAAGGGACTTTGTGGAAGAGGCATCTCGCCTCATATATTCTCCATAACTTAGGCCGGTTGCAGATGAGTCATTTT
CCCGCC-TTTTCCCAAAGAAACTTGTTCTCCAAATCACCACAAGAAATAAATTAGTAAAGCCAGTCACCCCTCTCGCTTT
TGGAATATTCTCAACAGCCAATTACAGTAATCAGTACGCAGTTAACTCTGGCATTCCTAACCTTCTCTGCACTCAACTAT
ACAAACTGG---------------------------------------AATGAGAATGAGAATGCTAAGATTCAGAGTTG
TGTGTGTTTGATCATTCTTCAGAGAAGTCGTTCCTGCCCAAGAGGGATCTGGAGTGGTTCTTCTTCGTGCCGCGGGACCG
CAAGTACCCCAACGGGTCGCGGACCAACCGGGCCACCACCACGGGGTACTGGAAGGCCACCGGCAAGGACCGCAAGGTGT
CGTGCGACGGCGCCGCCGTGTGCGGCGTCAGGAAGACGCTGGTGTTCTACAAGGGCAGGGCCCCCGGCGGCGAGCGCACC
GACTGGGTCATGCACGAGTACCGCCTCTGCCAGGACCTCCTCCACGGCGCCTCCAACTTCATCGGCGCCTACGCGCTCTG
CCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTGCACGGCGACGCGGCTGCCAAGGCGAGGCCGGGCCACCAGCAGATGA
GCAAGGTCGGGAGCAGCTCCTCCCTGGTCACCACGGACCAGCAGCTGAGCTCCCTCACGCCCAGCCCTCCGCGCCTCGAC
ATCGTCGGCAACGCCTTCCAGCTTCACAGCTCCCCCTCTCCCCTGTAC------GGAGGGGAGGTGGTGTCCGGGATGGG
CGCGCCTCTGGGGTTCCCGCAGCAGGACGCCGCCGCCACATTCTTCATCGACGGCGACCTCGCCGGCGCAGGCGAGACGA
CGCAGGCGCACATGCCTTTCTTCGACGACATGGGCGTGGTCTCGGACCACGAGCTCAGATGGGACACCTTGCCGCTCTGC
ACCAACAACGCCTTCTCCACCACGGCCGGTACGTGCAC---TGCTCTGCTTCACGAGCTCGATCAATTCTTGAATCCCCC
GTCGCCATTTTGCGCGAGTTCTCAATGCATATCATATGCATGTCCTTCTGCAGGCGCGGCGGAGCTCTGGAACCCGGTGG
CACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCCAGCGACGACCTGGCGGCGTTTTTCTCGTCCTTGGACGAAAAC
AACATGGTGGTCTACTGA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr1D_1_TraesCS1D01G194200
CCCCCGCAAAAAAAAAGGAATTCTGAAAACCGGTACGCGGCTGATGATGATGATAAACTTAGTTAATCAGCTGAACCGAA
GGGGGCTAAGCACGGATCTTGGTGACAGCGGAGTGAACCCATATTCAAAACCAAAGCACGTACAGTATGAAACAAAACGG
CACTTTCGAACCTTGCCGCCGC-------CTGCCGCGCCTCGCGATTCAGA-------------------AGAAGAATAA
CGCA-----------------TCGCCACGATACGCCCTGCACACGGAACGGAACGGCCAGACACGTTTTAGTTAGTGGTG
AATTGCCCGAGCAAGCAGCGAAAGGAAATGAAACGGGAAAAGAAGTGCGGATTGCGGGACGGTTTGGCGGCGGCTTGCGG
GCACGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCCTCGGACGACCTTCTCGCCTCGCAAGTCTCAAACCCTTTC--
------------CCTCCTCTATATAAACGGCACCACGCCCTTCACTTCCTCCCTCCCCAATCCAGCGCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCGGCCATCCCCGCCTTCCTCCCGCCGCCA----ACATCTCTAGCTAGCTCCACCTTCTTACTCAC
CGTGCGCTTGACCGATCCTCACAATCAATCAAGCTCTTTAGCTAGCGCCCTGTTAGTTGGCCACCATTCCTGTTCCATCA
AGTCTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAATCCTGGAGGCTGCTACACCGTATTCATCGCCAACAAGAGCT
TCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCTCCTCTCCACCTGACTCCATTCCTTCACCTGGATTCTAGAT
CTCTAGTCCTGCCTCAAGTATTTGTGATCGGCAGTTGACGCTATATATATACATACATACACACAGTTATTAGCTAG---
------------------CATCATCTGCTCCTCCTGGTCCTGGGTTGGG-----CTGGGTTACTGTTGGATCGAACTGCC
CAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGCAA----CGAGCATGGGCACCATGACTCTGCCGCCCGGCTT
CAGGTTCCACCCCACCGACGACGAGCTCGTCGGCTACTACCTCAAGCGGAGGGTCGACAACCTCAAGATCGAGCTCGAGG
TCATCCCCGTCATCGACCTCTACAAGTGCGAGCCATGGGAGTTGCCAGGTACATACATA-ACGTGCATCTTCTATCCGAT
TCATTCTGTATTT----CAACATGCCACACGTTCATTCATGCTTCGGCCGACAAAAAAAGTGTGCGAGAGAGAGAGTTGA
A-----TTTTAGCTATGTCAAACCGCATGGTGTTCACCTCTCCTTTCCCCCTGAATAGACAATTTATTTGATAAGTAATA
ATTTGCAATCATCCTCGAATAGCATAATTCTTTTAGAAAAAGAATCTGCCCTCCAAATTGCTTGCTAGCTAGCCAGCATA
CACGAAAAGGGACTTTGTGGAAGAGGCATCTCGCCTCATATATTCTCCATAACTTAGGCCGGTTGCAGATGAGTCATTTT
CCCGCC-TTTTCCCAAAGAAACTTGTTCTCCAAATCACCACAAGAAATAAATTAGTAAAGCCAGTCACCCCTCTCGCTTT
TGGAATATTCTCAACAGCCAATTACAGTAATCAGTACGCAGTTAACTCTGGCATTCCTAACCTTCTCTGCACTCAACTAT
ACAAACTGG---------------------------------------AATGAGAATGAGAATGCTAAGATTCAGAGTTG
TGTGTGTTTGATCATTCTTCAGAGAAGTCGTTCCTGCCCAAGAGGGATCTGGAGTGGTTCTTCTTCGTGCCGCGGGACCG
CAAGTACCCCAACGGGTCGCGGACCAACCGGGCCACCACCACGGGGTACTGGAAGGCCACCGGCAAGGACCGCAAGGTGT
CGTGCGACGGCGCCGCCGTGTGCGGCGTCAGGAAGACGCTGGTGTTCTACAAGGGCAGGGCCCCCGGCGGCGAGCGCACC
GACTGGGTCATGCACGAGTACCGCCTCTGCCAGGACCTCCTCCACGGCGCCTCCAACTTCATCGGCGCCTACGCGCTCTG
CCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTGCACGGCGACGCGGCTGCCAAGGCGAGGCCGGGCCACCAGCAGATGA
GCAAGGTCGGGAGCAGCTCCTCCCTGGTCACCACGGACCAGCAGCTGAGCTCCCTCACGCCCAGCCCTCCGCGCCTCGAC
ATCGTCGGCAACGCCTTCCAGCTTCACAGCTCCCCCTCTCCCCTGTAC------GGAGGGGAGGTGGTGTCCGGGATGGG
CGCGCCTCTGGGGTTCCCGCAGCAGGACGCCGCCGCCACATTCTTCATCGACGGCGACCTCGCCGGCGCAGGCGAGACGA
CGCAGGCGCACATGCCTTTCTTCGACGACATGGGCGTGGTCTCGGACCACGAGCTCAGATGGGACACCTTGCCGCTCTGC
ACCAACAACGCCTTCTCCACCACGGCCGGTACGTGCAC---TGCTCTGCTTCACGAGCTCGATCAATTCTTGAATCCCCC
GTCGCCATTTTGCGCGAGTTCTCAATGCATATCATATGCATGTCCTTCTGCAGGCGCGGCGGAGCTCTGGAACCCGGTGG
CACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCCAGCGACGACCTGGCGGCGTTTTTCTCGTCCTTGGACGAAAAC
AACATGGTGGTCTACTGAAGCTCTCGTTTCACACCCAAGAAAAGATCGTAGTAATTTCGGCAACAGAGGAAATAATTGCA
GAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTCAGCCAGTGTAC-GGGTCGTATACCGTA---TATGTAAGAGTAC
GTAGTATTGCTACGCATGTGTGTGTGTGTGTGTCTT--------GTACTCGGAGTGACGGCCTATTTTAGCACTGTCTTC
TCTCGCTGTGGCACGACACTTCCATCTCTTTCTTTACTGTGATTCAGTCTCTGTACTAGCTGCTGCTGCTGCTGCAATTT
ACGCAGCAATATATATGTTGTGCTCCCATTTCGGGCGATGTAAAATTCCCCATGGCTATTAATATTAATATATTATACAA
TATAACCTTCTTTAGAAAATGGAGGATACATCATCTATGCATTGGTTGATGCACAGGGTCGTGAATCTCATT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGATTCCTGT--------------------------
------------GGACATGTTTGGTTAGGGTTACGTT-AATGCAAACGGTGACGTAATGAGGTTACACTACATTGTGGAT
GCAATGCAACGGGACTTTTGCTAGTTTTGTTTGGTTGACTCAGGCAACAGGAACAGAGAGAAGGACTACATGCTTGTCAA
AAAAAAAGAGAGAGAGAGAAGGACTACATGGGAAACTGATGAGGTGGATGAAAGAGAAACTT----GAAAAAAGCTTTGC
ATTCTCTTA-------------------------ATTAAGAGATGATCACTTAGCAACAATACCTCTCATCATACATTTA
CTCATGGTATTTGATTACTACTAGAGATAAAGATTAAGAGATACTACCTCTGTTACTAGAGATAAAAATGTCTTATATTT
AGAAGCATAACTAGTAACATATTACGGCATCTCCAATGCCGACCCGTAAATCCACCCCTCTCCCCCATCCGTCCACGGAC
AGGGAAGGACGTGTCTATGGACAAGGATGCGGAAGACGGTCATCTAATGCTGCCCGCATACATTTCAACGACTATTTAAA
CCAACCACACGAAATTCGTGCAAACACGAC
>chr1A_18
-----------------GAATTCCGAAAACCGGTACGCGGCCGAGGATGAT---AAACTTAATTAATCAACTTAAGCCAA
GGGGGCTAAGCACGGATCTTGGTGACAGCGGAATGAACCCATATTCAAAACCAAAGCCCATATGA----AAACAAAACTG
CACTTTCGAACCTCCGCCCGCCGCCGCCGCTGCTGCGCCTCAGGGTTCAGA-------------------AAGAAATGAA
TAACGCATCCTGATCATCGCGTCGCCACGATACGCCCTGCACACGGAACGGAACGGCCAGGCACG-TTTGGTTAGTGGTG
AATTGCCCAAGCAAGCCGCGAAAGAAAACGAAACGGGAAAAGAAGTGCGGATTGCGAGACGGTTTGGCGGCGGCTTGGGC
GCGCGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCGCCCGACCACCTTCTCACCGCCTCTCCACCCTTTTCCCGTTG
GCTTCTCCTCCTCGTCCTCTATATAAACGGCACCATGCCCGTCACTTCATCCCTCCCCAA-------CCTCCTCTCCCTC
CTCCTCAGTCCTCTCCAGCCGTCTTCGCCTTCCTCCCGCCCGCCGCGGACGCCTCTG-----------------------
--------------------------------------------------------------------------------
---CTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAATCCTGGAGGCTGCTACACCGTATTCATCGCCAACAAGAGCT
TCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCTCCTCTCCACCTGACTCCGTTCCGCCTCCTGGATTCTAGAT
CTCTAGTCCTGCCTCGAGTATTTGTGATCGGCAGTTGACGCTACATATATACATACATACACACAGTTATTAGCTAGTCA
CAGCGCAAGCTTAAGTAGCATCATCTGCTCCTCCTGG------GTTGGGTTGGGCTGGGTTACTGTCGGATCGAACTGCC
CAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGCAAGCAACGAGCATGGGCACCATGACCCTGCCGCCCGGCTT
CAGGTTCCACCCCACCGACGACGAGCTCGTCGGCTACTACCTCAAGCGGAGGGTCGACAACCTCAAGATCGAGCTCGAGG
TCATCCCCGTCATCGACCTCTACAAGTGCGAGCCATGGGAGTTGCCAGGTACATACATACACATGCATCTTCCATCCGAT
TCATTCTGTATTT----CAACATGCCACACATTCATTCATGCTTCGACCGACAAAAAAAGTGTTCGAGAG----AGTTGA
A-----TTTTACCTATGTCAAACCGCATGGTGTTCACCTTTCTTCT-CCCCTGAATAGACAATTTATTTGACAAGTAATA
ATTTGCCATCATCCTCGAATCGCATAATTCTTTTAGAAAAAGAATCTGCCCTCCAAATTGCTTGCTAGCTAGCCAGCATA
CATGAAAAGGGACTTTGTGAAAGAGGCATCTCGCCTCATATATTCTCCATAACTTAGGCCGGTTGCAGATGAGTCATTTT
CCCGCCTTTTTCCCAAAGAAACTTGTTCTCCAAATCACCACA---------------------GCCACCCCTCTCAATTT
TGGAATATTCTCAGCAGCCAATCACAGTAATCAGCACACTGTTAACTCTGGCAT----AACCTTCTCTGCACTCAACTGT
AC------------------------ATAGCTAGTTTGTACAGTGGCCAATGTGAATGAGAATGCTGAGATTCAGAGGTG
TGTGCGTTTGATGATTCTTCAGAGAAGTCGTTCCTGCCCAAGAGGGACCTGGAGTGGTTCTTCTTCGTGCCGCGGGACCG
CAAGTACCCCAACGGGTCGCGCACCAACCGGGCCACCACCACGGGCTACTGGAAGGCCACCGGCAAGGACCGCAAGGTGT
CGTGCGACGGCGGCGCCGTGTGCGGCGTCAGGAAGACGCTGGTGTTCTACAAGGGCCGGGCCCCCGGCGGCGAGCGCACC
GACTGGGTGATGCACGAGTACCGCCTCTGCCAGGACCTCCTCCACGGCGCCTCCAACTTCATCGGCGCCTACGCGCTCTG
CCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTCCACGGCGACGCGGCCGCCAAGGCGAGGCCGGGCCACCGGCAGATGA
GCAAGGTCGGGAGCAGCTCGTCGCTGGTCACCACGGACCAGCAGCTGGGCTCCCTCACGCCCAGCCCGCCGCGCCTCGAC
ATCGTCGGCAACGCCTTCCAGCTCCACAGCTCCCCCTCTCCCCTGTACGGAGGAGGAGGGGAGGTGGTGTCCGGCATGGG
CACGCCTCTGGGGTTCCCGCAGCAGGACGCCGCCGCCACATTCTTCATCGACGGCGACTTCGCCGGCGCAGGCGAGACGA
CGCAGTCGCACATGCCCTTCTTCGGCGACATGGGCGTGGTCTCGGACCACGAGCTCAGATGGGACACCTTGCCGCCCTGC
GCCAACAGCACCTTCTCCACCACCGCCGGTACGCGCACTGATGCTCTGCCTCACGAGCTCGATCAATTCTTGAATCCCCC
GTCGCCATTTCGCGCGAGTTCTCAATGCATAT-----GCATGTCCTTCTGCAGGCGCGGCGGAGCTGTGGAACCCGGCGG
CACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCGAGCGACGACCTGGCGGCGTTTTTCTCGTCCTTGGACGAGAAC
AACATGGTGGTCTACTGAAGCTCTCGTTTCACACCCAAGAAAAGATCGTAGTAATTTCGGCAACAGAGGAAATAATTCCA
GAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTCAGCCAGTGTACGGGGTCGTATACCGTATGATATGTAAGAGTAC
GTAGTATTGCTACGCGCGCGTGTGTGTGTGTGTCTTGTACAGTTGTACTCGGAGTGACGGCCTATTTTAGCACTGTCTTC
TCTCGCTGTGGCACGACACTTCCATCTCTTCCTTTACTGTGATTCAGTCTCTGTACTAGCTGCTGCTGCTGCTGCAATTT
ACGCAGCA----ATATGTTGTGCTCCCATTTCGGGCGATGTAAAATTCCCCATTGCTCTTATACAAT------------A
TATAACCTTCTTTAGAAA-TGGAGGATACATCATCATCATCATCATCTATTCTAACA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ATTCATGACCCTGTGATTCCTATGTACTCCCTCCGTTCCGAACTAGTAA
TTCGGAACGGAGGGACATGTTTGGTTAGGGTTACGTTGAAAGCAAATGGTAACGTAATGAGGTTACACTACATTGTGGGT
GT-----AACGGGGCTTTTGCTACTTTTGTCTGGTTGACTCACGCAACAGGAACAGAGAGAAGGACTACATGCATGTCAA
AAAAAAAG-------GAGAAGGACTACATGGGAAAATGATGAGGTGGATGAAAGAGAAACTTGAAAGAAAAAAACTTTGC
ATTCTCTTTTTCTTTGGTGAAAATAGAAATAAAGATTAAGAGATGATCTCTTAGCAACAATACCTCTCACCATACATTTA
ATCATAGTATTTGAT---TACTAGAGATAAAGATTAAGAGATACTATCTCTTTACTA--AGATAAAAACGTTTTATATTT
AGAAGCAGAACTA-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr1B_18
-----------------GAATTCTGAAAACCGGTACGCGGCCGAGGATGAT---AAACTTAATTAATCAACTGAACCGTA
GGGGGCTAAGCACGGATCTTGGTGACAGCGGAATGAACCCATATTCAAAACGAAAGCCCATATGA----AAACAAAACTG
CACTTTCGAACCTCCG----CCGCCGCTGCTGCTGCGTCCCAGGGTTCAGAAAAAAAAACACGGAAGAGGAAGAAATGAA
TAACGCATCATGATCATCA-----CCACGATACGCTTTGTACACGGAATGAACACA-----CACG-TTTGGTTAGTGGTT
AATTGCCCG----AGCCGCGAAAGAAAACGAAACGGGAAAAGAAGTGCGGATTGCGAGACGGTTTGGCGGCTGCTTGCGG
GCGCGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCGTCGGACCACCTTCTCACCGCCTCTCGACCCTTTTCCCGTTG
GC---TCCTCCTCCTCCTCTATATAAACGGCACCATGCCCGTCACTTCATCCCTCCCCAA-------CCTCCTCTCCCTC
CTCCTCACTCCTCTCCAGCCGTCTTCGCCTTCCTCCCGCCGCCA----ACGTCTCTG-----------------------
--------------------------------------------------------------------------------
---CTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAATCCTGGAGGCTGCTACACCGTATTCATCGCCAACAAGAGCT
TCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCTCCTCTCCACCTGACTCCATTCCTTCACCTGGATTCTAGAT
TTCTAGTCCTGCCTCAAGTATTTGTGA-CGGCAGTTGACGCTATATATATACATACATACAC----TTATTAGCTAGTCA
CAGCGCAAGCTTAAG---CATCATCTGCTCCTCCTGG------GTTGGG-----CTGGGTTACTGTTGGATCGAACTGTC
CAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGCAA----CGGGCATGGGCACCATGACTCTGCCGCCCGGCTT
CAGGTTCCACCCCACAGACGACGAGCTCGTCGGCTACTACCTCAAGCGGAGGGTCGACAACCTCAAGATCGAGCTCGAGG
TCATCCCCGTCATCGACCTATACAAGTGCGAGCCATGGGAGTTGCCAGG----TACATACACATGCATCTTCTATGCGAT
TCATTCTGTATTTCAACCAACATGCCACACATTCATTCATGCTTCGACTGACAAAAAAAGTGTGTGC--GAGCGAGTTGA
ATTCCCTTTTAGCTATGTCAAACCGCATGGTGTTTACCTTTCTTTCCCCCCTGAATAGACAATTTATTTGATAAGTAATA
ATTTG---TCACCCTCGAATAGCATAATTCTTTTAGAAAAAGAATCTGCCCTCCAAATTGCTTGCTAGCTAGCCAGCATA
CATGAAAAGGGACTTTGTGAAAGAGGCATCTCGCCTCATATATTCTCCATAACTTAGGCCGGTTGCAGATGAGTCATTTT
CCCGCCTTTT-CCCAAAGAAACTTGTTCGCCAAATCACCACA---------------------GTCACCCCTCTCAATTT
TGGAATATTCTCAACGGCCAATTACAGTAATCAGTACACAGTTAATTCTGGCAT----AACCTTCTGTGCACTCAACTGT
ACATAGCTACTACTTCTAAAAAAAACATAGCTAGTTTGTACAGTGACCAATGTGAATGAGAATGCTAAGATTCAGAGCTG
TGTGCGTTTGATCATTCTTCAGAGAAGTCGTTCCTGCCCAAGAGGGACCTGGAGTGGTTCTTCTTCGTGCCGCGGGACCG
CAAGTACCCCAACGGGTCGCGGACCAACCGGGCCACCACCACGGGGTACTGGAAGGCCACCGGCAAGGACCGCAAGGTGT
CGTGCGACGGCGGCGCCGTCTGCGGCGTCAGGAAGACGCTGGTGTTCTACAAGGGCCGGGCCCCCGGCGGCGAGCGCACC
GACTGGGTCATGCACGAGTACCGCCTCTGCCAGGACCTCCTCCACGGCGCCTCCAACTTCATCGGCGCCTACGCGCTCTG
CCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTGCACGGCGACGCGGTTGCCAAGGCCAAGCCGGGCCACCAGCAGATGA
CCAAGGTTGGGAGCAGCTCCTCCCTGGTCACCACGGACCAGCAGCTGAGCTCCCTCACGCCCAGCCCTCCGCGCCTCGAC
ATCGTCGGCAACGCCTTCCAGCTTCACAGCTCCCCCTCTCCCCTGTAC------GGAGGGGAGGTGATGTCCGGCATGGG
TGCGCCCCTGGGGTTCCCGCAGCAGGACGCCGCCGGCACATTCTTCATCGACGGCGACCTCGCCGGCGCAGGCGAGACGA
CGCAGGCGCACATGCCTTTCTTCGACGACATGGGCGTGGTCTCGGACCACGAGCTCAGATGGGACACCTTGCCGCTCTGC
ACTAACAACACCTTCTCCTCCACCGCCGGTACGTGCACTGCTCTGC---TTCACGAGCTCGATCAATTCTTGAATCCTCC
GTCGCCATT-CGCGCGAGTTCTCAATGCATAT-----GCATGTCCTTCTGCAGGCGCGGCGGAGCTTTGGAACCCGGCGG
CACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCGAGCGACGACCTGGCGGCGTTTTTCTCGTCCTTGGACGAAAAC
AACATGGTGGTCTACTGAAGCTCAGATTTCACAACCAAGATCGTG--GTAGTAATTTCGGCAACAGAGGAAATAATTCCA
GAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTTAGCCAGTGTAC-GGGTCGTATACCGTA---TGTGTAAGCGTAC
GTAGTACTGTGTGTCA-----GTGTGTGTGTGTCTT--------GTACTCGGAGTGACGGCCTATTTTAGCACTGTCTTC
TCACGCTGTGGCACGACACTTCCTTC----TCTTTACTGTGACTCAGTCTCTGTACTAGCTGCTG---------------
-------A----ATATGTTGTGCTCCCATTTCGGG-GATGTAAAATTCCCCATTGCTATTATACAAT------------A
GTATAAAATTCCC--------------------------CATTGATTGATGCAGAGGGTCATGAATTGTTATTTTTTCAA
ACGCAAGTTTTATTCATTTGAAATAACCATTACATCATTTACGAGGATTGGTACGATTTCATTTAAAGGCTCTCAAACCA
AATAAAAGTTAAAGAGAACCTAGCCAACCTAGCAAGCTCATGAGCAACTTTATTTGCTTCTCTATTACAATGCTCGAATC
TAGAAATAAGGAAATCACAAGCAAAATGGAAACATTCATGAAAAAATTACCGCCGCCACACTTGTCAATCGTCCTTCATC
CTTCATTATATCAATCATCTTCAGATTGTCGAGTTAATAACAAGGTGATTGCAACCCGCCCTTTGCTCAAGTGATAGACC
AAATCCAAGGGCCGAAGCTTCAGCCGTCAGGACATCTGCGCACCAGTCATAACCCCCTCCCCCCCTTCTCCTCCCAACCT
CAGCGAATTTGCCTTTATCATCCTTCATTTGATTCATGACCGTGTGATTCCTAT--------------------------
------------GGGCATGTTTGGTTAGGGTTTCGTT-AACGCAAATAGTAACGTAATGAGGTTACACCACATTGTGGAT
GT-----AACAGGACTTTTGCTAGTTTTGTTTGGTTGACTCAGGTAAC-GGAACAGGGAGAAGG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>SNPs
SSSSSSSSSSSSSSSSS------------------------S--S------SSS-------S-------S----------
--------------------------------S------------------------S-S--SSSSSSS---------S-
-------------SSS-S-SS------------S-------SS-S--------------------------SS-S-SS--
SSSS--------------------------------------------------------S----S---S----------
----------------S-------S---S---------------------------S-----------------------
--S-----------------------------------S------S--------S--S-SSSSSSSS-SSSSS-SSSS--
-----------------------------------S----S-------S-----------SSSSSSS-------SS----
------SSS-SS----S---S--SS-------------------------S-----SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------SSSSSS-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
------------------------------S---------------S-------------------------S-------
---------------------------------------S--S-------------------------------------
------S-------------------------------------------------------------------------
--S----------------S------------------------------------------------------------
------------------------------------------SSSSSSSSSSSSSSSSSSSSS------------SS---
-------------------------------------S----------------SSSS--------------------S-
---S-SSSS-------------------------------------------S------------------------S--
----S------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-------------S--------------------------------------------------------
----------S---------------------SSSSS-----------------------------S----------S--
-------------------------------------S------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
----------------S-S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------SSSS-----------------------------------------S-------SSSSSSSSSSSSSSSSSS-
------------------S----------------SSSS-----S--------S------S-----SSSSS---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
----------------------------------------S-----S---S-----------------------------
-SSSSSS------------------------------------------------------------------S------
--------SSSSSSS--------------------S-------------------------------------S------
--------S---------------------------------------S--------------------S----------
S----S---------SSS----------------------------S----S-SSSSSS---------S--S--------
-------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_649
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTCTTACTCAC
CGTGCGCTT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_1662
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CAGTCACCCCTCTCGCTTT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>forward_707
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CCCTGTTAGTTGGCCACCAT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_1663
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGTCACCCCTCTCGCTTT
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>forward_714
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGTTGGCCACCATTCCTGTT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_2651
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGCGCGAGTTCTCAATGCAT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>forward_2057
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GCTGGTGTTCTACAAGGGCA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_4258
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-----------------TGGACAAGGATGCGGAAGAC-------------------------------------------
------------------------------
