>input_sequence_45741
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---------------------TCGAATGTAGAACAGGG---GAAGCGATGTTACGACATCCAGTGTGGGGAGCCATCTGC
TTGCTCGCCGTCTTGCTGGTCCTGTGCACAGACAAGCTCTGCACGGACGCCAGGCCGTCCGCCTACGCGCTCCTGGTCGA
CGA---CGACGACGAGGACGACGG---------CGACGGCTCCGGCTCGTCGTCTTTCTCCTTCTCCTCCCCGCACGAGA
CGCCGGACGAACTGGCATTCGGGTTCTACGACGGGACATGCCCCAGCGCCGAGGCGATCGTCGCGTCCACCGTGCGGGAG
CTCTTCGCGGCCGACGCCAACGTCGCCGCCGCGCTCGTCCGCCTCTTCTTTCACGACTGCTTCGTCCACGTAAGTACGAA
CCGAACTCCGTGTTCTGCAGATCAAGATATCTCTTCTGCCTGCACGCGCGCGCTCACGTACGCACACGGCAAGACGCTGT
GCTCTGTTTTCTTTTCGTCCCTGGACGCGCCGTTGCAGGGCTGCGACGCCTCGGTGCTCCTGGACCGGATCGG---CGGC
GGCAAGTCGGAGAGGGACGCCGCCCCGAACCGCTCGCTGCGAGGCTTCGGCGCCGTCGACAAAATTAAGGCGAGACTGGA
GAAGCAGTGCCCGGGGACCGTCTCCTGCGCCGACATCCTGGCGCTGGCCGCGCGGGACAGCCTCGTACTGGTGGGCGGGC
CGACCTACCCAGTGCTCACCGGCCGCCGAGACAGCGCCGGGAGCTTCTACGACGACGTGAACATCCCGGCGCCGAACGCC
ACCTACGCCATGACGCTCAGCGCGTTCGCCCGCCGCGGCTTCACCGAGCGCGAGACCGTCGCGCTCTTAGGTCCGTCCGT
GTGTCCGTCCATCGGAGCTCCCTGCAGAACTTACTACACACATTTTATGTGATCCAAGCTCTC-------GGACTCGACC
CGCTTGTAGGAGCACATAGCATCGGGAAGGTGCAGTGCAGATTCTTCAGGGACAGGATCTACAACTTCGCCGGGACCGGC
GAGCCGGACGACTCCCTGGACGCGGACATGGTCGGCGAGATGCGGGCCGTGTGCAGCGGAGACGGCGCGGCGCCGATGGA
GATGGGGTACTACCGGCAGGGCCGGGAAGTGGGGTTCGGCGCGCACTACTACGCGAAGCTCCTCGCGGGGCGGGGCATCC
TGCGCTCGGACCAGCAGCTCACGGCGGGGAGCACCGTGCGGTGGGTGCGCGCGTACGCGGCCGGGCATCGCGGCGAGGAG
GCTTTCCGCGAGGACTTCGCGCACGCCATGGTTAAGCTGTCCGCGCTTGCGCCGCTCAAAGGGTCGGCCGGGCAGGTCCG
GGTCAGCTGCTCCAAGTCCGTTGAGTAGGAGCCGTGAGGGCTTTTTGTCAGCGCCGGGGATTCTAACTCGGTCTGAGATT
GGATCACATACGAATTGTAGCAAGGTTTAC--------------------------------------------------
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------------------------------------------------------------------------GGTGGTTC
ATAGGATTCTCGCCGGCGAGCTCATCTCCTAGCTAGGTCTCTCACGGTCTCACTCTCACCTACTCCTTTGCCACACACTT
CTGTCAGGGTGTTGAACGTGACATATGTGTATTAATCTTTCTATAGTCTCTAGCC-----TAGTTGACTTCTAGAAATAC
GATAGAATTAGTTGGCTTGTCACGCAGAACATATCGTGTATATATTGTGAACAACTCTCAGGAATACAATTGAGTTGCAT
CT------------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G249200
TCAGGAAGCATCGGTCGTCGCCAGAAACCGGAGAGGGAGGGTTGTGGAGCCGTCTCCGCTGCCG-CCTGAAGACGCTCCC
GGGGGATCCACCCGAGCCGAGCGCCGCCACCCAGCCGCGAGGGCCCGACTGGGTGGGGGCAGCCCACCACCACCGCTGCC
GCGCCCCCCTCCCACCAAA-CACCACGGCGAGAGGGCCGCCCGCGACCCGGTCAACCGCGACCCGCGGCGCCGGACGCGA
TGCCGAAACGCTGCCGGGGGCACCGCCGCCGACGCCACCACCGGCCCGCACCACCACCATGCCGCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---------------------------------
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------------------------AGATCTGGCCCGCGCCGAACCCTACGAGCGGGGGACGAAGGAGCCCCGCCGCCGCC
AGCGACGGCCGGGCTTCGCCTGGCCGCGCCCCTTGGTGGCGGCGAGGGCGGAGGAGGGAGGAGGAGGGGGGGTGCGGCGG
CCGGGATCGGGAACCCTCCCTGACGCCTCGCGGGTGGCGGCGGGGAAGGGAGGGGAGGGAGTGTAGATCTTCTTCCGCTG
AACCTAACCCCC-AAGGCCCACAAAGCAA-AAATATTTCCCCGCGCCGTTTTAAAATTCTTCGCCTTCACGCCTTAACTT
CCAACACCTCCAGCTCAAAAATCGAATGTAGAACAGGG---GAAGCGATGTTACGACATCCAGTGTGGGGAGCCATCTGC
TTGCTCGCCGTCTTGCTGGTCCTGTGCACAGACAAGCTCTGCACGGACGCCAGGCCGTCCGCCTACGCGCTCCTGGTCGA
CGA---CGACGACGAGGACGACGG---------CGACGGCTCCGGCTCGTCGTCTTTCTCCTTCTCCTCCCCGCACGAGA
CGCCGGACGAACTGGCATTCGGGTTCTACGACGGGACATGCCCCAGCGCCGAGGCGATCGTCGCGTCCACCGTGCGGGAG
CTCTTCGCGGCCGACGCCAACGTCGCCGCCGCGCTCGTCCGCCTCTTCTTTCACGACTGCTTCGTCCACGTAAGTACGAA
CCGAACTCCGTGTTCTGCAGATCAAGATATCTCTTCTGCCTGCACGCGCGCGCTCACGTACGCACACGGCAAGACGCTGT
GCTCTGTTTTCTTTTCGTCCCTGGACGCGCCGTTGCAGGGCTGCGACGCCTCGGTGCTCCTGGACCGGATCGG---CGGC
GGCAAGTCGGAGAGGGACGCCGCCCCGAACCGCTCGCTGCGAGGCTTCGGCGCCGTCGACAAAATTAAGGCGAGACTGGA
GAAGCAGTGCCCGGGGACCGTCTCCTGCGCCGACATCCTGGCGCTGGCCGCGCGGGACAGCCTCGTACTGGTGGGCGGGC
CGACCTACCCAGTGCTCACCGGCCGCCGAGACAGCGCCGGGAGCTTCTACGACGACGTGAACATCCCGGCGCCGAACGCC
ACCTACGCCATGACGCTCAGCGCGTTCGCCCGCCGCGGCTTCACCGAGCGCGAGACCGTCGCGCTCTTAGGTCCGTCCGT
GTGTCCGTCCATCGGAGCTCCCTGCAGAACTTACTACACACATTTTATGTGATCCAAGCTCTC-------GGACTCGACC
CGCTTGTAGGAGCACATAGCATCGGGAAGGTGCAGTGCAGATTCTTCAGGGACAGGATCTACAACTTCGCCGGGACCGGC
GAGCCGGACGACTCCCTGGACGCGGACATGGTCGGCGAGATGCGGGCCGTGTGCAGCGGAGACGGCGCGGCGCCGATGGA
GATGGGGTACTACCGGCAGGGCCGGGAAGTGGGGTTCGGCGCGCACTACTACGCGAAGCTCCTCGCGGGGCGGGGCATCC
TGCGCTCGGACCAGCAGCTCACGGCGGGGAGCACCGTGCGGTGGGTGCGCGCGTACGCGGCCGGGCATCGCGGCGAGGAG
GCTTTCCGCGAGGACTTCGCGCACGCCATGGTTAAGCTGTCCGCGCTTGCGCCGCTCAAAGGGTCGGCCGGGCAGGTCCG
GGTCAGCTGCTCCAAGTCCGTTGAGTAGGAGCCGTGAGGGCTTTTTGTCAGCGCCGGGGATTCTAACTCGGTCTGAGATT
GGATCACATACGAATTGTAGCAAGGTTTAC--------------------------------------------------
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------------------------------------------------------------------------GGTGGTTC
ATAGGATTCTCGCCGGCGAGCTCATCTCCTAGCTAGGTCTCTCACGGTCTCACTCTCACCTACTCCTTTGCCACACACTT
CTGTCAGGGTGTTGAACGTGACATATGTGTATTAATCTTTCTATAGTCTCTAGCC-----TAGTTGACTTCTAGAAATAC
GATAGAATTAGTTGGCTTGTCACGCAGAACATATCGTGTATATATTGTGAACAACTCTCAGGAATACAATTGAGTTGCAT
CTCATATCTTTTCTACTACATGGTATAAGTTTTCATCGCGATTTCCATCACTTCCGCTCCACGCAGCCGCCGCCCCTCCC
TGTAGCCGCCACTGCCCCTCCTCCCAAACCCTAACGCCGCCGTCGCTACTCCCTCTATAGCCGCCGCTGCCTTCCCCCAA
ACCCTACGCTGCCGCCGCTACTCCCTCCCGTAGCCGCCTCCTCCTCCCCCAAACCCTACGCCGCCGCCGCTACTCCCTCC
CGTAGCCGCCGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTACTCCCTCCCGTAGCTGCC
GCCGCCCCTCCCCTACCCTTGGTTGCCATCCTCTCCCTAGCCATCACCTAAACCCTAAACACCGCCGCCACCCCACCTCC
CTCCCACTGCCACCATGTCCCGCTCCAAGGCCGATCTGTCCGACGCCGGCTCCTTCACTGGCCCAATGTTCACCTCTGAT
CGCCTCAACGAGCTCCACATCAAAGATCACGTGCCCATCGTCCTCGACCTCGACTCGCCATCCTACAACGCATGGCGCAC
CTACTTCACGCTCTTGTTCCGCTCCTACCGTCTCATCGAGCATGTTGACGGGAGCGTTGACTTCCGCGACATGAGGGACG
ACGACAAGTGGCTTGTCGTGGACGCTTCCATCGTCAAGTGGC
>chr3A_1
TCAGGAGGCATTAGTCGTCGCCAGAAGCTGGAGAGGGAGGGTTGCGGGGCCGTCACCGCCGCCG-CC-GAAGACGCCACC
GGGGGATCCACCCGAGCCGAGCGCCGCCACCCAGCCGCAAGGGCCCGACTGGGTGGGGGTAGCCCACCACCACCGCTGCC
CCCA---CCCCC-ACCAGAGCACCATGGCGAGAGGGCCGCCCGCGACCCGGTCAACCGCGACCCGCGGCGCCGGACGTGA
CGCCGAAGCGCTGTCGGGGGCACCGCCGCTGACGCCACCACCGACCCCCACCACCACCATGCCGCCCGCCGCCCGTCGAA
CGCCACCATCACCGGCCTGCTCCGGGGCGCCGC-----------------------------------------------
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-----------------------------------------------------------------------CGCGCCCGG
CATCAAGCGCCGCGCCCGGCTGCTAGATCTGGCCCGCGCCAAACCCTACGAGCGGGGGACGAAGGAGCCCCACCGTCGCC
GGCGACGGCCGGGCTTCGCCCGGCCGCGCCCCTTGGCGGCGGTGAGGGCGGAGGAGGGAGGA----GGGGGGTGCGGTGG
CCGGGATCGGGAACCCTCCCCGACGCCTCGCGGGTGGCGGCGGGGGAGGGAGGGAGGG----------------------
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>chr1A_1
TCAGGAGGCATCGGCCGTCGCCAGAAGCCGGAGAGGGAGGGTTGCGGAGCCGTCCCCGCCACCG-CCTGAAGACACCACC
GGGGGATCCACCCGAGCCGAGCGCCGCCACCCAGTCGCGAGGGCCCGACTGGGTGGGGACAACCCACCACCACCGATGCC
GCGCCGCCCCCCTACCAGAGCACCACGGCGAGAGGGCCGCCCGCGACCCGGTCGACCGCGACCCGCGGCGCTAGACGCAA
CGCTGAAGCGCTGCTGGGGGCACCGCCGCCGACGCCACCACCGGCCCGCACCACCGCCATGCCGCCCGCCGCCCGTCGAG
CGCCACCATCGCCGGCCTACTTCGGGATGCCGC-----------------------------------------------
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-----------------------------------------------------------------------CACGCCCGG
CATCGAGAGCCATGCCCAGCCGC-AGATCTAGCCCGTGCCAAACCCTACAAGCGGGGGACGAAGGAGCCCCGCCACTGCC
GGCGACGGTCGGGCTTCGCCCGGCCGCGCCCCTTGGCGGCGGCGAGGGCGGAGGAGGGAAGAGGA--GGGGGTGCGGCGG
CCGGGATCGGGAACCCTCCCCGACGCCTCGCGGGTGGCGGCGGGGGAGGGAGGGGAGGGAGT------------------
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>chr1D_3
--AGGATGCATCGGCCGTCGCCAGAAGCCGGAGAGGGAGGGTTGCGGAGCCGTCTCCGCCGCCGCCC-GAAGACGCCACC
AGGGGATCCACCTGAGCCGAGCGCGGCCACCCAGCCGCGAGGGCCCGACTGGGTGGGGGCAGCCCACCACCGCCGCTGCC
GCGCCGCCCCCC-ACCAGAGTACCACGGCGAGAGGGCCGCCCGCGACCCGGTCAACCGCGACCCGCGGCGCCGGATGCGA
CGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGCCCGG
CATCGAGCGCCGCGCCCAGCCGCTAGATCTGGCCCGCGCCATACCCTACGAGCGGGGGACGAAGGAGCCCCGCCGCCGCC
GGCGACGCTCGGGCTTCGCCCGCCCGCGCCCCTTGGCGGCGGCGAGGGCGGAGGAGGGAGAAGGAGGGGGGGTGCGGCGG
CGGGGATCGGGAACCCTCCCCGATGCCTCGCGGGTGGCGGCGGGGGAGGGAGGGGAGGGAG-------------------
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>chr3A_884
GTATATC-------------------------------------------------------------------------
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--------------------------------------------------------------------CTTCTTCCCCTG
AACCTAACACCCCAAGGCCCACAAAGCAA-AAGTATTTTCCCGCGCCGTTTTAAAATTCCTCGCCATGACGCCTTAACTT
GCAACACCTCCAACTCAAAATGGAATGTTAGAACAACAGAAGGAGCGATGTTACGACATCCACTGTGGGGAGCCATCTGC
TTGCTCGCCGTCTCGCTGGTCCTGTGCACAGACAAGCTCTGCACGGACGCCAGGCCGTCCGCCTACGCGCTCCTGGTCGA
CGACGACGACGACGAGGAAGACGG---------CGGCGA---CGGCTCGTCGTCCTTCTCCTTCTCCTCCCCGCAGGCGA
CGCCGGACGAACTGGCATTCGGGTTCTACGACGGGACATGCCCCAACGCCGAGGCCGTCGTCGCGTCCACCGTGCGGGAG
CTCTTCGCCGGCGACCCCAACGTCGCCGCCGCGCTCGTGCGCCTCTTCTTTCACGACTGCTTCGTCCACGTACGTACAAA
CTGAACTCCGTGCCCCGCAGATCAAGATATCTCTTCTGCCTGCACGCGCACGCTCACGTACGCACACGCCAAGACGCTGT
GCTCTGTTTTCTTTTCGTCCCCGGACGCGCGCATGCAGGGCTGCGACGCCTCGGTGCTGCTGGACCGGATCGGCGGCGGC
GGCAAGTCGGAGAAGGACGCCGCCCCGAACCGCTCGCTGCGAGGCTTCGGCGCCGTCGACAAAATTAAGGCGAGGCTGGA
GAAGCAGTGCCCGGGGACCGTCTCCTGCGCCGACATCTTGGCACTGGCCGCGCGGGACAGCCTCGTACTCGTGGGCGGGC
CGACCTACCCAGTACTCACTGGCCGCCGAGATAGCGCCGGGAGTTTCTACGACGACGTGAACATCCCGGCCCCGAACGCC
ACCTACGCCATGACGCTCAGCGCGTTCGCCCGCCGCGGCTTCACCGAGCGCGAGACCGTCGCGCTCTTAGGTCCGTCCGT
GTGTCCGTCCATCGGAGCTCCCTGCTGAACTTACTACACGCATTTTATGTGTTAATTGATTGATTCTTCTGGACTCGACC
CGCTTGTAGGAGCACACAGCATCGGGAAGGTGCAGTGCAGATTCTTCAGGGACAGGATCTACAACTTCGCCGGGACCGGC
GAGCCGGACGACTCCCTGGACGCGGACATGGTCGGCGAGATGCGGGCCGTGTGCAGCGGAGACGGCGCGGCGCCGATGGA
GATGGGGTACTACCGGCAGGGACGGGAAGTGGGGTTCGGCGCGCACTACTACGCGAAGCTCCTCGCGGGGCGGGGCATCC
TGCGCTCGGACCAGCAGCTCACGGCGGGGAGCACCGTGCGGTGGGTGCGCGCGTACGCGTCCGGGCATCGCGGCGAGGAG
GCTTTCCGCGAGGACTTCGCGCACGCCATGGTTAAGCTGTCCGCGCTTGCGCCGCTCACAGGGTCGGCCGGGCAGGTCCG
GATCAGCTGCTCCAAGTCCGTTGAGTAGGAGCCATGAGGGCTTTTTGTCAGCGCTAGGGATTCTAACTCGGTCTCAGATT
GGATCACATACGAATTGTAGCAAGGTTTAC--------------------------------------------------
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------------------------------------------------------------------------GGTGGTTC
ATAGGATTCTCGCCGGCGAGCTCGTCTCCTAGCTAGGTCTCTCACGGTCTCACTCTCACCTACTCCTTTGCCACACACTT
CTGTCAGGG-----------------------------------------------------------------------
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>chr3B_884
GTATATCA------------------------------------------------------------------------
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---------------------------------------------------------------------TTCTTCCCCTG
AACCTAACACCCCAAGGCCCACAAAGCAAAAAATATTTTCCCGCGCCGTTTTTAAATTCCTCGCCTTGACGCCTTAACTT
CCGACACCTCCAACTCAAAAATCGAATGTAGAACAGGG---GGAGCGATGTTACGACATCCAGTGTGGGGAGCCATCTGC
TTGCTCGCCGTCTCGCTGGTCCTGTGCACAGACAAGCTCCGCACAGACGCCGGACCCTCCGCCTACGCGCTTCTGGTCGA
CGA---GGAGGAGGAGGACGACGGTGGCGACGGCGACGGCGACGGCTCGTCGTCCTTCTCCTTCTCCTCCCCGCAGGCGA
CGCCGGACGAACTGGCATTCGGGTTCTACGACGGGACATGCCCCAACGCCGAGGCGGTCATCGCGTCCACCGTGCGGGAG
CTCTTCGCGGCCGACCCCAACGTCGCCGCCGCGCTCGTGCGCCTGTTCTTTCACGACTGCTTCGTCCACGTACGTACAAA
CTGAACTCCGTGTCCCGCAGATCAAGATATCTCTTCTGCCTGCACGCGCGCGCTCACGTACGCACACGCCAAGACGCTGT
GCTCTGTTTTCTTTTTGTCCCCGGACGCGCGCATGCAGGGCTGCGACGCCTCGGTGCTCCTGGACCGGATCGG---CGGC
GGCAAGTCGGAGAGAGACGCCGCCCCGAACCGCTCGCTGCGAGGCTTCGGCGCCGTCGACAAAATTAAGGCGAGGTTGGA
GAAGCAGTGCCCGGGGACCGTCTCCTGCGCCGACATCTTGGCGCTTGCCGCGCGGGACAGCCTCGTACTGGTGGGCGGGC
CGACCTACCCAGTGCTCACCGGCCGCCGAGACAGCGCCGGGAGCTTCTACGACGACGTGAACATCCCAGCCCCGAACGCC
ACGTACGCCATGACGCTCAGCGCGTTCGCCCGCCGCGGCTTCACCGAGCGCGAGACCGTCGCGCTCTTAGGTCCGTCCGT
TTGTCTGTCCATTGGAGCTCCCTGCAAA---------------TTTATGTGTTAATTGATTGATTCTTCTCGGCTCGACC
CGCTTGTAGGAGCACATAGCATCGGGAAGGTGCAGTGCAGATTCTTCAGGGACAGGATCTACAACTTCGCCGGGACCGGC
GAGCCGGACGACTCCCTGGACGCGGACATGGTCGGCGAGATGCGAGCCGTGTGCAGCGGAGATGGCGCGGCGCCGATGGA
GATGGGGTACTACCGGCAGGGCCGGGAAGTGGGGTTCGGCGCGCACTACTACGCGAAGCTTCTCGCGGGCCGGGGCATCC
TGCGCTCGGACCAGCAGCTCACGGCGGGGAGCACCGTGCGGTGGGTGCGCGCGTACGCGTCCGGTCATCGCGGCGAGGAG
GCTTTCCGCGAGGACTTCGCGCACGCCATGGTTAAGCTGTCCGCGCTTGCGCCGCTCAAAGGGTCGGCGGGGCAGGTCCG
GATCAGCTGCTCCAAGTCCGTTGAGTAGGAGCCGTGAGGGCTTTTTGTCAGCGATAGCGATTCTAACTCGGTCTCAGATT
GGATCACATACGAATTGTAGCAAGGTTTAGGGCCAGTTCTTTTGGGCGATTCTTTTAGAATTGCCCCCCTCCCTAGCTTT
TTTTAGAATTGTCACTTCATATATTTTTTATAATCCTATTTAGTTAAGGTTTAATTATTTAGGATTGTAGAAAATATATA
GAGTGGTGATTCTGGGAGAAGCTGGAGAAGAGGACGATTCTGGGAGAATCGCTGAAAAGAACTGGCCCTTAGGGTGGTTC
ATAGGATTCTCGCCGGTGAGCTCGTCTCCTAGCTAGG--TCTCACGGTCTCACTCTCACCTACTCCTTCGCCACACACTT
CTGTTAGGG-----------------------------------------------------------------------
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>chr6A_2543
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------------------------------ATTAATCTTTCTATGATCTCCAGCCATGTATAGTTGACTTTTAGAGATAT
GGTAGGATTAGTTGGCTTGTCACGCAAGACATATCGTGTATATATTGTGACCAACTCCGAGGAATACAATTGAGTTGCAT
CCCATATATTTTCTACATGGTG------GTTTTCATTGTGATCTCCCCCGCTTCCGTCCCACGCAGCCGCCGCCCCTCCC
TGTAGCCGCCGATGCCCC--CTCCCAAACACTAACACCGCCTCCGCTACTCCCTCTGTAGCCTCCACTGCCTCCTCCCAG
ACCCTACACCACCGCCACTACTCCCTCTCGTAGTCGCCGCTGCCTCCCCCAAACCCTACACCTTCGCTGCTACTCCCTCC
CGTAGCCGCCGCCTCCCCCCAAACACTACACCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCC----------------------------------------------------------------
----------------------------------------------------------GCTACTCCCTCCCGTAGCCGCC
GCTTCCCCTCCCCTACCCTCAGCCACCATCTTCTCCCTATCCACCACCAAAACCCTAA-CACCACTGCTACCCCACCTCC
CTCTCACCGCCACCATGTCCCACTCCATGGTCGATCTGTCCGATGCCGGCTCCTTCGCTGGCGCCATGTTCACCTCTGAC
CGCCTCAACGAGCTTGACATCAAAGATCACGTGCCCTTAGTCCTGGACCTCGACTCGCCATCCTACAACGCATGGTGCAC
CTACTTCACGCTCTTGTTCTGCTCCTACCGTCTCATCGAGCATGTTGACGGGAGTGTCGACTTCCGCAACATGAAGGATG
ACGATGAGTGGCTTATTGTACATGCTTGCATCATCAAGTGGC
>SNPs
------S-------------------S-----------------S--------------S----------------SS--
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-----S---S--S----S--------------------------------------------------------------
S------S------------------------------------------------------------------------
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----------------------------------------S---------------------------------------
S-------------------S---------------S-------------------------------------------
--------------------S------------------------S----------------SSSSSS--------S---
--------S-----------------------------S--------------------S-------S------------
------------S-----------------------------S-------------------------------------
-------------S------------------------------------------------------------------
----------------------------------------SS------------S--------------------S-S--
---------------------------------------------S----------S-----------------------
---------------S----------------------S---------------------------------S----S--
-S-----------S-S----------------------------------------------------S-----------
---------------------S--------SSS-----------------------------------------------
--------------------------------------------------------------------------S-----
-------------------------------------S------------------------------------------
----------------------------------------------------------------------S---------
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---------------------------------------S-----------S-SSSS-S-SSS-----------------
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-----------------------------------------------------------S--------------------
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-S----------------------------------------------------SS------------------S-----
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-----------------------S--------------------------------------------------------
---------SSSSSSSSSSSSSSSSSSSSS--------------SS----S-------------------S----S---S
-S---S--------------------SS----------------------S------SS---------------------
-S-----S--------SSSS--SSSSSS--------S-S---S---SS-S------SS----------------------
----------SS------SS---------S-----S-----SS-------------S-----S--S------S-S----S
-------S-SS-----S----------S-----S----S-SS-----------------S--SS---S------------
--------------SSSSSSSSSSSSSSSSSSSS----------------------------------------------
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-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S---
--SS---------------SS-SSS-----S--------S---S----S---------S----S-S--S-----------
---S---S-------------S-----S--S------------S------------S-----S-S--------------S
--------------SS--------------------S-S-----S------------------------------S----
-------------------S----------------------------------S--S---------S------S---S-
----SS--------S-S--SS-S----S----S---------
>forward_1028
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------------------------------------------------GGAGGGGAGGGAGTGTAGAT------------
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>reverse_3083
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------------------------------------------TTCCATCACTTCCGCTCCAC------------------
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