>input_sequence_45712
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---------------------------------------ATGGGCGGTGGCAACGCGCAGAAGTCCAAGATGGCGAGGGA
GAGGAACCTCGAGAAGCTGAAGGGCGGCAAGGGTAACGGAGCTAAT--CCCCTTCTCTTGGTCGCCAGATCTTCTTGGTC
TTCCTGATCTGATCCTGTCGGCGTTTTCTCTTGTGATCCTTCGCAGGGAGCCAGCTCGAGGCCAACAAGAAGGCCATGAA
CATCCAGGTGCGCCG-TTAATCCCGCCTGTCCAATCGATCGAATCGATCTAACCCTCTCTAGCGATTGGGGATTTTTTTT
TCCGCAGACGAGACTGTTATCTGTTGAATTTGTTGAAATTACGCCTTTAACTGGGACGGGATGCGTGGCCCGTCAGTTGC
AACGACGATTGGTAGCCTATTTCTCCATAGGACTCTGGGTGGATGGATTTTTCTTTTTTGTGCGGTGATTATCGGTAGGA
TTTGGAGCGTA--TTTCTCAATTGCGCCTAGAGAAACGAAGTGAGTCATGTACTCTACTTTTGACTGCCAGGACTATAGC
TAGCGTATCGACATACTAGTATGCTAGATTACAAGTTAATTTTTTCCAAAATTGCTCCTTCGGGCATAGATCTAGGG-GT
ATTTTCCTCGCATATCGTGCGTATTACAAGTTACTACTAGTTGTTTGTCTGCCTGAGTTCTGCCAAGCAAAGTTGCAACC
TTCACAGTGTGTGTGTCGCTGTTTGATAAGTACTCCCTCCGTTCCTAAATATAAGTCTTAGAGATTCCACTACAAACTAC
ATACGGATGTATATAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCTGTATGTAGTCCATAGTGGAATCTCTAAA
AAGGCTTATATTTAGAAACGGAGGGAGTAAGAGACACTTG-TAGTTCAATGAGATATAATCTGACAGCTTTAAGAGTGTG
GCATGTCCGAACCAGCTTTGGGCTGCTACCAAGCAAGGCTATGCTTGTTTCTGAAACTTGTTCTGGATGGTACTAGCTAG
TCACTAGGATCCAGGGGGAAGG--GGTAGCTGGAAGACTCCTGTTAAGTTAGTGTATAGTCCCAGTGGATGCGCCCGTTG
TTTGCTTACCAACTTGATGGACTGAGCTTGAGATGCCAAATAGC---------------------CAGGTGAAAAATTCT
AGTCTCTTGGAGCCCAACTGCTCACAACTTGAACTAGTAACAAAGTGATGTAGCCCTTGATATAATG-AAAATTG-TCAT
TGCAGTGTATAATTAGTCTTGACAAAT-AATCATGGCAGTCATGTTGCCTGTGAGTTAATCAACTT-CTTGTCTGCCAAT
TGATGTGCACCATATTGGATAGCTGAAATATTTCAGTGGCTTTGCCTTGCACATCATACCAGTCTAGTGAATACTCCCTC
TGTCCCGAATTAAAGTTGTAGTGTTAGATACATCCGTATTTAGACAAATCTAAGACAAGTAATTTGGGATGGAGGTAATA
TGTTATAAGTTACCGTAGATATCTTGTAATCTTCCGCATTTCTGCCAAGAAACATTATTTCGT--ATTGCCTGGTCATCT
GATCAATGCTTCCTTCCCAATGCAGTGCAAGATATGCATGCAGACTTTCATCTGCACCACCTCTGAAGCAAAGTGCAAGG
AGCACGCCGAGGCGAAGCATCCGAAGAGCGACCTCGTCCAGTGCTTCCCCCACCTCAAGCCGTGA---------------
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>chr2A_1_TraesCS2A01G263300
CCCCAAAGTAGGTCGATAAAGTGATGACACAACACGGTTGACATAGCGAGTTGAAGCCTCCGACTCAGCTGACATGACGA
AGCGGGTCGGCAAGGTGACGTTGGATCCCCTAGAGTAGGTCGATGAAGTGACAACACAACACAGTTGATGTTGCGAGTCG
AAACCTTTGGTCCAGCTGACATGACGAAGCAGGTCAGCGGGGCGACGTTGGAG--CCCCAAGAGTAGGTCGATGAAGTGA
TGACGCCGAAGCCCTTGACTCCTTGAGCCAGCCGAGGTGGCAGGGGCAAATCGATGAGGTGACGTCGGAGCCTTCACGTC
AGCCGACGTGACGGAGCAGGTTGGGATGGTGGACGTCAGCATGATATGAAGTGACGACGCGACGATGCCGGCGCAAGTCG
AAATTCATGACGGGATCGATGTTGGCTTGCTGAAGTGATGGCGCGACGATGTCGGCGCGCCCAACCTGTGCAATCCGTGG
GACGGCGATGTGGTCTCCTCCCCTCCCTCCTCATGCACCCAACGCTCCGAGGACGGCACAACCCTCTCATCTCTGCCACG
TGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CACCAAGATAT
TGGTCTCGGTGGAGCTGCGAGATTCTTGTGAGAAATCAACGGTCGAGGAGACGTTTGTTTCCAGATCTAAAAATCCGATG
TCAGATTTTTATCGATTCCGTTAAAGTATTTTGAATTTTA-TTCTAGACCCAGTTTTCTTACAGCTATTTCTAGACCCGG
TTCATAGCACCACTTTGTTAAAGATGGTTCTAGACCTCGGAAGGAGCAGCTAACGGACGGTCCAGATACGCCCTCCTTCA
GCGGGGGTCCACACGGACACTGGCACGCGCAAGTTGCCCGCGATTGATTGACGCCAACGTCGGCCCCCGCCTCCACCTCC
CACCTCCACGTCTATTAAACGCAGCCGCCTCCTGCTTCTCGCCTTCCCCACCAAATTTCCGCCGAAGCAGAAAAGCATCG
TCTCTCGT----------CTCGTCGAGGAATCAACAACCATGGGCGGTGGCAACGCGCAGAAGTCCAAGATGGCGAGGGA
GAGGAACCTCGAGAAGCTGAAGGGCGGCAAGGGTAACGGAGCTAAT--CCCCTTCTCTTGGTCGCCAGATCTTCTTGGTC
TTCCTGATCTGATCCTGTCGGCGTTTTCTCTTGTGATCCTTCGCAGGGAGCCAGCTCGAGGCCAACAAGAAGGCCATGAA
CATCCAGGTGCGCCG-TTAATCCCGCCTGTCCAATCGATCGAATCGATCTAACCCTCTCTAGCGATTGGGGATTTTTTTT
TCCGCAGACGAGACTGTTATCTGTTGAATTTGTTGAAATTACGCCTTTAACTGGGACGGGATGCGTGGCCCGTCAGTTGC
AACGACGATTGGTAGCCTATTTCTCCATAGGACTCTGGGTGGATGGATTTTTCTTTTTTGTGCGGTGATTATCGGTAGGA
TTTGGAGCGTA--TTTCTCAATTGCGCCTAGAGAAACGAAGTGAGTCATGTACTCTACTTTTGACTGCCAGGACTATAGC
TAGCGTATCGACATACTAGTATGCTAGATTACAAGTTAATTTTTTCCAAAATTGCTCCTTCGGGCATAGATCTAGGG-GT
ATTTTCCTCGCATATCGTGCGTATTACAAGTTACTACTAGTTGTTTGTCTGCCTGAGTTCTGCCAAGCAAAGTTGCAACC
TTCACAGTGTGTGTGTCGCTGTTTGATAAGTACTCCCTCCGTTCCTAAATATAAGTCTTAGAGATTCCACTACAAACTAC
ATACGGATGTATATAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCTGTATGTAGTCCATAGTGGAATCTCTAAA
AAGGCTTATATTTAGAAACGGAGGGAGTAAGAGACACTTG-TAGTTCAATGAGATATAATCTGACAGCTTTAAGAGTGTG
GCATGTCCGAACCAGCTTTGGGCTGCTACCAAGCAAGGCTATGCTTGTTTCTGAAACTTGTTCTGGATGGTACTAGCTAG
TCACTAGGATCCAGGGGGAAGG--GGTAGCTGGAAGACTCCTGTTAAGTTAGTGTATAGTCCCAGTGGATGCGCCCGTTG
TTTGCTTACCAACTTGATGGACTGAGCTTGAGATGCCAAATAGC---------------------CAGGTGAAAAATTCT
AGTCTCTTGGAGCCCAACTGCTCACAACTTGAACTAGTAACAAAGTGATGTAGCCCTTGATATAATG-AAAATTG-TCAT
TGCAGTGTATAATTAGTCTTGACAAAT-AATCATGGCAGTCATGTTGCCTGTGAGTTAATCAACTT-CTTGTCTGCCAAT
TGATGTGCACCATATTGGATAGCTGAAATATTTCAGTGGCTTTGCCTTGCACATCATACCAGTCTAGTGAATACTCCCTC
TGTCCCGAATTAAAGTTGTAGTGTTAGATACATCCGTATTTAGACAAATCTAAGACAAGTAATTTGGGATGGAGGTAATA
TGTTATAAGTTACCGTAGATATCTTGTAATCTTCCGCATTTCTGCCAAGAAACATTATTTCGT--ATTGCCTGGTCATCT
GATCAATGCTTCCTTCCCAATGCAGTGCAAGATATGCATGCAGACTTTCATCTGCACCACCTCTGAAGCAAAGTGCAAGG
AGCACGCCGAGGCGAAGCATCCGAAGAGCGACCTCGTCCAGTGCTTCCCCCACCTCAAGCCGTGATATCTGCCAAATCGG
ACGGAGAGAGAGAGAA-------------------GCTGCCGTAATCCACCTAGTATTATCATGTTCCGCAATGACTGGT
TGTTGACCTAAGCATGGG-TCTGAACTCTGGTGTGCTGCTGTCCCAGCTGCTTTGGTTGTGTGCCCATCTACTATGTAAT
CGTCCTCTATCAGCCTGTTGTGCTACAATATCTTAATCCTGTGTGGATTTGCTCCTCGTGCTTAGTCAGTATGCTGTCAC
AAAATTCATCTTTTTGAT-ATGTTTCTCGCTTCCAATGGCACCGATGCTAGCTTGGTCAGAGCACGGTTTACAGCCAAGC
TACATCAAACATCAGCAG--TTATTTTTTTTGAAAGCAAA-CACAAATTTCTATTACGATTACTCGCTGGCCATATCACC
AGCAACAGCGTCTAGTACAGGTTGCGGAAAGTGGCCAAGCCGAGTCTCATAGCACCCACTCTCAATATAGACTCCACTCG
CAGCTAAC-------------------------------ATATTTGCTGCTTTATTGCAACCACGGCTAGATTGATTCAC
ACTCACAACATTCAGACCTACATGCACCTTAAACTTCACATCTGTACACAAAGTGCCTAAAGCTGAAAGATCATAGGTTG
TTACTTGTTATTGCTTCCTTCAGCCTTGTGGAATCTGTTTCAAATATCACTT-GTTGGCAGCCCAAATGAGTAGCAGTAA
TAGTTGCTTGCTGAAGGGCCAAAGCTTCAGCATGCAATGGACTGGAGACTTGATTCAGACTTCGAGCACCTGCTGCCAGG
AG-----------CATTCCTGACGGTGAAACCC-AGCCTCCTGACTGTGTTTCTTCAGTAAAGGATCCATCTGTGTTTAT
CTTGAGAATTCCCTTCGGAGGTGGCTTCCACTCATGTTTTGCTTGCTTGCTCATCTCTTCCTTCTTTGTCTTGTCCTTCA
C--------------GCAAGTCAATTGAAGATA-----------ATACTT--------CTT---GTGGGTTCATCCTTAC
TAGCGTTGTTTCTTTCATGCCACCATAACCATAAAAGTAAGCAAACTTT
>chr2D_1
CCCCAAAGTAGGTCGATGAAGTGACGACACAACACGATTGACGTTGCGAATTGAAGCCTCCGGTCTAGCTGACATGACGA
AGCGGGTCGGCGGGGTGACGTTGGAGCCCCTAGAGTAGGTTGATGAAGTGACGACACAACACAGTTGATGCTGCGAGTCG
AAACCTTTGGTCCAGCTGACATGACGAAGCAGGTCAGCGGGGCGACGTTGGAG--CCCCCAGAGTAGGTCGATGAAGTGA
TGACGCCGAAGCCCTTAACTCCTTGAGCCAGCCGAGGTGGCGGGGGCAAATCGATGAGGTGACGCTAGAGCCCTCACGTC
AGCCGACGTGACGGAGCAGGCTGGGATGGTGGACGTCGGCATGATATGAAGTGATGACGCAGCGATGCCGACACAGGTCG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACGTGGCACCATGATAT
TGGTCCCGGTGTAGCTGCGAGGTTCTTGTCAGAAATCAACCGTCCAGGAGACGTTTGTTTCCAGATT--AAAAATCGACG
TCAGATTTTTATCGATTCCGTTAAAGCATTTTGAATTTTATTTATAGGCCCAGTTTTCTTACAGCTATTTCTAGACCCGG
TTCATAGCACCACTTTCAC--AGATGGTTCTAGACCTCGGAACGAGCAGCTAACGGACGGTCCAGATACGCCCTCCTTCA
GCGGGGGTCCACACGGACACTGGCACGCGCAAGTTGCCCGCGATTGATTGACGCCAACGTCAGCCTCCGCCTCCACCTCC
CACCTCCACGTCTATTAAACGCAGCCGCCTCCTGCTTCTCGCCTTCCCCACCAAATTTCCGCCGAAGCAGAAAAAGCA--
----TCGT----------CTCGTCGAGGAATCAACAGCCATGGGCGGCGGCAACGCGCAGAAGTCCAAGATGGCGAGGGA
GAGGAACCTCGAGAAGCTGAAGGGCGGCAAGGGTAACGGAGCTAATTCCCCCTTCTCTTGGTCGTCAGATCTTGTTGGTC
TTCCTGATCTGATCCTGTCGGTGTTTTTTCTTCTGATCCTTCGCAGGGAGCCAGCTCGAGGCCAACAAGAAGGCCATGAA
CATCCAGGTGCGCCGATTAATCCCGCCTATCCAATCGATCGAATCGATCTAACCCTCTCTAGCGATTGGGGATTTTTTTT
CCGCT-GACGAGACTGTTATCTGTTGAATTTGTTGAAATTACGCCTTTGACTGGGACGGGATGCGTGCCCCGTCAGTTGC
AACGAAGATTGGTAGCCTATTTCTCGATAGGACTCTGGGTGGATGGTTTTTTCTTTTTTGTGCGGCGATTATCGGTAGGA
TTTGGAGCTTA--TTTCTCAATTGCGCCAAGAGAAACGAAGGGAATCATG-----TACTTTTGACTGCCAGGACTATAGC
TAGCGTATCAACATACTAGTATGCTAGATTACAAGTTAATTGTA-CCAAAATTGCTCCTTCGGGCATAGATCTGGGG-GT
ATTCTCATCGCATATCGTGCGAATTACAAGTTACTACTAGTTGTTTGTCTGCCTGAGTTCTGCCAAGCAAAGTTGCAACC
TTCACAGTGTGTG---CGCTGTTTGATGAGTA------------------------------------------------
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-----------------------------AGAGACACTTGGTAGTTCAAAGAGATATAATCTGACAGCTTTAAGAGTGTG
GCATGTCCGAACCAGCTTTGGACTGCTACCAAGCAAGGCTATGCTTGTGTCTGAAACTAGTTCTGGATGGTACCAGTTAA
TCATTAGGATCCACGGGG-AGG--GGTAGCTGGAAGACTCTTGTTAAGTTAGTGTATAATCCCAGTGGATGCGCCCGTTG
TTTGCTTACCAACTTGATGGACTGAGCTTGAGATGCCAAATAGCTACATTTCCTTACTGTCGACACAGGTGAAAAATTCT
AGTCTCTTGGAGCCCAACTGCTCAGACCTTGAATTAGTAACAAAGTGATGTGGCTCTTGATATAATGTAAAACTGTCCAT
TGCAGTGTATAATTAGTCTTGACAAAACAATCTTGGCAGTCATGTTGCCTACGAGTTCATCAAATTTCTTGTCTGCCAAT
GGATGTGCACCATATTGGATAGCTGAAATGGTTCTGTGGCTTTGTCTTGCACATCATACCGGTCTAGTGAATAC------
--------------------------------------------------------------------------------
-GTTATAAGTTTAGAGATCTT--------------------------AGAAACATTATTTGCTAAATTGCCTGATCATCT
GATCAATGCTTCCTTCCCAATGCAGTGCAAGATATGCATGCAGACTTTCATCTGCACCACCTCTGAAGCAAAGTGCAAGG
AGCATGCTGAGGCGAAGCATCCGAAGAGCGACCTCGTCCAGTGCTTCCCCCACCTCAAGCAGTGATATCTGCCCAATCAG
ATGGAGAGAGAGATAAA------AGAGAGAGAGAAGCTGTCATAATCCACCTAGTATTATCATGTTCCGCAATGACTGAT
TGTTGACCTAAGCTTGGG-TCTGAACTCTGGTGTGCTGCTGTCCCAGCTGCTTTGGTTGTGTGCCCATCTACTATGTAAT
CGTCCTCTATCAGCCTGTTGTGCTACAATATCTTAGTCCTGTGTGGATTTGCTCCTCGTGCTTAGTCAGTATGCTGTCAC
AAAATTTATCTTTTTGATAATGTTTCTCGCTTCCAATGGCACCGATGCTAGCTTGGTCAGAGCACGGTTTACAGCCAAGC
AGCATCAAACATGAGCAGTCTTTTTTTTTTCGAAAGCAAA-CACAGATTTCTATTATGATTACTCGCTGGCCATATCACC
AGCAACAGCGTCTAGT-CAGGTTGCGGAAAGTGGCTAAGCCGAGTCTCATAGCAGCCACTCTCCATATAGACTCCACTTG
CAGCTAACACATATGTGCTCCCCCGCAAAAAAATAAAAAATATGTGCTGCTTTATTGCAACCACGGCTACAATGATTCAC
ACTTACAACATTCAGACCTACATACATCTTAAACTTCACATCTGTAAACAAAGTGCCTAAAGCTGAAAGATCGTA-GTTG
TTACTTGTTATTGCTTCCTTCAGCGTTGTGGAATCTGTTTCAAATATCACTT-GTTGGCAGCCCAAATGAGTGGCAGTAA
TAGTTGCTTGCTGAATGGCCAAAGCTTCAGCATGTAATGGACTGGAGACATGATTCAGATTTCCAGCACCTGCCGCCAGG
AGCGTTCCTTGGTCATTCCTGATGGTGAAACCC-AACCTTCTGAGTGTGTTTCTCCAGTAAAGGATCCATCTGTGTTTAT
CTTGAGAATTCCCTTCGGAGGTGGCTTCCACTTATGTTTTGCTTGCTTCCTCATCTCTTCCTTCTTTGTCTTGTCCTTCA
T--------------GCAAGTCAATTGAAGATGATACTTCCTGTATACAT--------CTT---GTGGGTTCATCCTTAT
TAGCGTTGTTTCTTTCATGCCACCATAACCATTAAAGTAAGCAAACTTT
>chr2B_2
-CCCAAAGTAGGTCGATGAAGTGACGACACAGCACGGTTGACGTTGCGAGTTGAAGCCTCCGGTCCAGCTGACATGACGA
AGCGGGTCGGCAGGGTGACGTTGGAGCCCCTAGAGTAGGTTGATGAAGTGTCGACACAACACAGTTGATGTTGCGAGTTG
AAACCTTTGGTCCAGCTGACATGACGAAGCAGGTCAGCGGGGCGACGTTGGAGCCCCCCCAGAGTAGGTCGATGAAGTGA
TGACGTCTAAGCCCTTGACTCCTTGAGCCAGCCGACGTGGCGGGGGCAAATCGATGAGGTGACGCCAGGGCCCTCACGTC
AAGCGACGTGATGGAGCAGGTTGGGATGGTGGACGTCGGCATGATATGATGTGACGACGCAGGTCGGAA-----------
-----CATGACGGGATCGATGTTGGCTTGTTGAAGTGATGGCACGACGATGTCGGCGCGCCCGACCTGTGCAATCCGTGG
GGCGGCGATGTGGTCTCCTCCCCTCCCCCCTCATGCCCCCAGCGCTCCGAGGACGACGCAACCTGCTCATCTCTGCCACA
CCA-----------------------------------------------------------------------------
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---------------------------------------------------------------------CACCATGATAT
TGGTCCCGGTGGAGCTGTGAGATTTTTGTCAGAAATCAACGGGCCAGGAGACGTTTGTTTCCAGTTCTAAAAATCCGACG
TCAGATTTTTATTGATT-CGTTAAAGCATTTTGAATTTTATTTCTAGACCCAGTTTTCTTACAGCTATTTCTAGACCCGG
TTCATAGCACCACTTTCAC--AGATGGTTCTAGACCTCGGAACGAGCAGCTAACGGACTGTCCAGATACGCCCTCCTTCA
GCGGGGGTCCACACGGACACTGGCACGCGCAAGTTGCCCGCGATTGATTGACGCCAACGTCGGCTTCCGCCTCCACCTCC
CACCTCCACGTCTATTAAACGCAGCCGCCTCCTGCTTCTCGCCTTCCCCACCAAATTTCCGCCGAAGCAGAAAAAGCA--
----TCGTCTCGTCTCGTCTCGTCGAGGAATCAACAGCCATGGGCGGCGGCAACGCGCAGAAGTCCAAGATGGCGAGGGA
GAGGAACCTCGAGAAGCTGAAGGGCGGCAAGGGTAACGGAGCTAATTCCCCCTTCTCTTGGTCGTCAGATCTTGTTGGTC
TTCCTGATCTGATCCTGTTGGTGTTTTCTCTTCTGATCCTTCGCAGGGAGCCAGCTCGAGGCCAACAAGAAGGCCATGAA
CATCCAGGTGCGCTGATTAATCCCGCCTATCCAATCGATCGAATCGATCTAACCCTCTCTAGCGATTGGGGATTTTTTTT
TCCGCAGACGAAACTGTTATCTGTGGAATTTGTTGAAATTACGCCTTTAACTGGGACGGGATGCGTGCCTCTTCAGTTGC
AACGACGATTGGTAGCCTATTTCTCGATAGGACTCTGGGTGGATGGTTTTTTCTTTTTTGTGCGGCGATTATCGGTAGGA
TTTTGAGCTTTTTTTTGTCAATTACGCCTAGAGAAACGAAGGGAATCATA-----TACTTTTGGCTGCCAGGACTATAGC
TAGCGTATCGACATACTAGCATGCTAGATTACAAGTTAATTGTA-CCAAAATTGC-CCTTCGGGCATAGATCTGGGGGGT
ATTCTCATCGCATATCGTGCGAATTACAAGTTACTACTAGTTGTTTGTCTGCCTGAGTTCTGCCAAGCAAAGTTGCAACC
TTCACA--GTGTGTGTCGCTGTTTGATAAGTA------------------------------------------------
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-----------------------------AGAGACACTTG-TAGTTCAATGAGATATAATCTGACAGCTTTAAGAGTGTG
GCATGTCCTAACCAGCTTTGGTCTGCTACCAAGCAATGCTATGCTTGTGTCTGAAACTAGTTCTGGATGGTACCAGTTAA
TCATTAGGATCCACGGGGGAGGGCGGTAGCTGGAAGACTCTTGTTAAGTTAGTGTATAATTCCAGTGGATGTGCCCGTTG
TTTGCTTACCAACTTGATGGACTGAGCTTGCGATGCCAAATAGCTACATTTACT--------ACACAGGTGAAAAATTCT
AGTCTCTTGGAACCCAACTGCTCACACCTTGAATTAGTAACAAAGTGATGTGGCTCTTGATATAATG-AAAATTGTTCAT
TGCAGTGTATAATTAGTCTTGACAAAACAATCTTGGCAGTCATGTTGCCTACGAGTTCATCAAATTTCTTGTCTGCCAAT
GGATATGCACCATATTGGATAGCTGAAATGGTTCTGTGGCTTTGTCTTGCACATCATACCGGTCTAGTGAATAC------
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-GTTATAAGTTTAGATAACTT--------------------------AGAAACATTATTTGGTAAATTGCCCGATCATCT
GATCAATGCTTTCTTCCCAATGCAGTGCAAGATATGCATGCAGACTTTCATCTGCACCACCTCTGAAGCAAAGTGCAAGG
AGCATGCCGAGGCAAAGCATCCGAAGAGCGAGCTCGTCCAGTGCTTCCCTCACCTCAAGCAGTGATATCTGCCCAATCAG
ACAGAGAGAGAGATAAAAGAGAGAGAGAGAGAGAAGCTGTCATAATCCACCTACTATTATCATGTTCCGCAATGACTGAT
TGTTGACCTAAGCTTGGGGTCTGAACTC-GGTGTGCTGCTGTCCCGGCTGCTTTGGTTGTGTGCCCATCTACTATGTAAT
CGTCCTCTATCAGCCTGTTGTGCTACATTATCTTAATCCTCTGTGGATTTGCTCCTCGTGCTTAGTCAGTATGCTGTCGC
AAAATTCATCTTTTTTAC-ATGTTTCTCGCTTCCAATGGCACCGATGCTAGCTTGGTCAGAGCACGGTTTACAGCCAAGC
AGCATCAAACATGAGCAGT-TTTTTTTTTTTGAAAGCAAA-CACAGATTTCTATTACGATTACTCGCTGACCATATCACC
AGCA-CAGCGTCTAGTACAGGTTGCGGAAAGTGGTCAAGCCGAGTCTCATAGCAGCCACTCTTCATATAGACTCCACTCG
CAGCTAAC---------------------------------ATGTGCTGCTTTATTGCAACCACGGCTACAATGATTCAC
ACTTACAACATTCAGACCTACATACATCTTAAACTTCACATCTGTAAACAAAGTGCCTAAAGCTGAAAGATCATA-GTTG
TTACTTGTTATTGCTTCCTTCAGCGTTGTGAAATCTGTTTCAAATGTCACTT-GTTGGCAGCCCAAATGAGTAGCAGTAA
TAGTTGCTTGCTGAAGGGCCAAAGCTTCAGCATGCAATGGACTGGAGACATGATTCAGATTTCCAGCACCTGCCGCCAGG
AGCGTTCCTTGGTCATTCCTGATGGTGAAACCC-AACCTCCTGAGTGTGTTTCTCAAGTAAAGGATCCATCTGTGTTTAT
CTTGAGAATTCCCTTAGGAGGTGGCTTCCACTTATGTTTTGCTTGCTTGCTCATCTCTTCCTTCTTTGTCTTGTCC----
-------------ATGCAAGTCAATTGAAGATG-----------ATACTTCCCGTATACTT---GTGGGTTCATCCTTAT
TAGCGTTGTTTCTTCTCAT------------------------------
>chr5D_3003
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--------------------TTCTTTCTTTTGAAAGGAAA-CACAGATTTCTATTACGATTACTCGCTGGCCATATCATC
AGCAACAACATCTAGTACAGGTTGCGGAAAGTGACCAAGCCAGGTCTCATAGCAGCCACTCTCCATACAGACTCCACTCG
CAGCTAAC-------------------------------ATATGTGCTGCTTTATTGCAACCACGGCTATAATAATCCAC
ACTTGCAACATTTAGACCTACGTACATCTTAAACTTCACATCTGTAAACAAAGTGCTTAAAGCTGAAAGATCATA-GTTG
TTACTTGTTATTGCTTCCTTCAGCGTTGTGGAATTTGTTTCAAATATCACTTTGATGGCAGCCCAAATGAGTAGTAGTAA
TAGTTGCTTGCTGAAGGGCCAAAGCTTCAACATGCAATGGATTGGAGACATGATTCAGATTCCCTGCACAAGCCGCCAGG
AGTGTTCCTTGGTCATTCCTGATGGTAAAACCCCAGCCACCTGAGTGTGTTTCTTCAGTAAAGGATCCATCTGTGTTTAT
CTTGAGAATTCCCTTCGGAGGTGGCTTCCACTTATGTTTTGCTTGCTTGCTCATCTCTTCCTTCTTCGTCTTGTCCTTCA
TGCACATGTTCAGATGATAGTCAGTTGAAGATG-----------ATATTTGTTGTATACTTCGTGTGTGTTCAACCTTAT
TA-CTTTGTTTCTTTCATGCCACCATAACCATAAAAGTAAGCAAACTTT
>chr1B_3003
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--------------------TTCTTTTTTTTG-----AAA-GACAGAATTCTATTACGATTACTCGCTGGCCATATCACC
AGCAACAGCGTCTAGTACAGGTTGCGGAAAGTGGCCAAGCCAGGTCTCATAGCAGCCACTCTCCATACAGACTCCACTCA
CAGCTAAT-------------------------------ATATGTGCTGCTTTATTACAATCACGGCTACAATGATCCAC
ACTTACAACATTCAGACCTACATACATCTTAAACTTCACATCTGTAAACAAAGTGCCTAAAGCTGAAAGATCATA-GTTG
CTACATGTTATTGCTTCCTTCAGCGTTGTGGAATCTGTTTCAAATATCACTT-GTTGGTAGCCCAAATGAGTAGCAGTAC
TAGTTGCTTGCTGAAGGGCCAAAGCTTCAGTATGCAATGGACTGGAGACATGCCTCAGTTTCCCTACACCTGCCGCCAGG
AGCGTTCCTTGGTCATTCCTGATGGTGAAACCCCAGCCTCCTGATTGTGTATCTTCAATAAAGGATCCATCTGTGTTTAT
CTTGAGAAT-CCCATCGGAGGTGGCTTCCACTTATGTTACTCTTGCTTGCTCATCTCTT----CTTCGTCTTGTCCTTCA
TGCACATGTTCAGATGATAGTCAATTGAGGATG-----------ATACTTCCTGTATACTTCTAGTGGGTTCATCCTTAT
TAGCTTTATTTCTTTCATGCCACCATAACCATAAAAGTAAGCAAACTTT
>chr4B_3003
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--------------------TTTTTTTTTTTGAAAGGAAAACGTAGTATTCCATTACTATACCTCACTGGCCGTATCGCC
AGCAACAACATCTAATACAAACTGTGAAAAGTGGCCAATCCAGGTCTCATAACAGCCACTATCCAAACAGGCTCCCCTCG
CAGCTAGC-------------------------------ATGTGTGCTGCTTTATTACACACACGGTTACAGTATTCCAC
ACTTACAACATTTAAGCCCACACACATCTGAAACTTTACATCTTTAAATAAAGTTCCTAAAGCTGAAAGATCATA-GTTT
TTACTTGTGATTGCTTCCTTCAGGATTGTAGAATCTGTTTCAAAAATCACCT-GTTGGCAGCCCATTTGTGTAGCAATGA
TAGTTGCTTGCTGTATGGCCAAAGCTTCAGCATGTAGAGGACTAGAGACATGGTACAGGTTTCCTGCCCCTGCTGCCAGT
AAAGTTCCTTGATCATTTCTAATGGCGAAACCCCAACCTCCTGAGTGTGATTTCTCTGTAAAAGCTCCGTCCGTGTTTAT
CTTGAGAATTTCTTTTGGAGGTGGCTTCCATTTATGTGGTTCTTGCTTGCCTATCCCTTCCTTTTTTGGCTTGCCCTTCA
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>chr6D_3006
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-----------------------TTTTTTTTGAAAGGAAAACATAGTATTCCATTACTATACCTCACTGGCTATATCGCC
AGCAACAACATCTAATACAAACT-TGGAAAGTGGCCAATCCAGGTCTCATAACAGCCACTATCCAAACAGGCTCCCCTGG
CAGCTAAC-------------------------------ATGTGTGCTGCTTTATTACAAACACGGTTACAGTATTCCAC
ACTTACAACATTTAAGCCCACACACATCTGAACCTTTACATCTTTAAACAAAGTTCATAAAGC--------------TTT
TTACTTGTGATTGCTTCCTTCAGGATTGTAGAATCTGTTTCAAAAATCACCT-GTTGGCAGCCCATTTGTGTAGCAATGA
TGGTTGCTTGTTGTAGGGCCAAAGCTTCAGCATGTAGAGGACTAGAGACATGGTACAGGTTTCCTGCCACTGCTGCCAGT
AAAGTTCCTTGATCATTTCTAATGGTGAAACCCCAACCTCCAGAGTGTGATTTCTCTGTAAAAGCTTCGTCTGTGTTTAT
CTTGAGAATTTCTTTTGGAGGTGGCTTCCATTTATGTGGTTCTTGCTTGCCCATACCTTCCTTTTTTGGCTTGCCCTTCA
TGCACATATTCAAATGATAATCAATTGAAGATG-----------AAATTTCATATATACTTCTTATGGGTTCACCATTAT
TAGCTTTGTTTCTTTCATGCCACCATAACCATAATAGCCAGCAGACTTT
>chr3B_3007
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------------------------TTTTTTTGAAAGGAAAACATAGTATTCCATTACTATACCTCACTGGCCATATCGCC
AGCAACAGCATCTAATACAAACTGTGGAAAGTGGCCAATCCAGGTCTCATAACAGCCACTATCCAAACAGGCTTCCCTCG
CAGCTAGC-------------------------------ATGTGTGCTGCTTTATTACACACACAGTTACAGTATTCCAC
ACTTACAACATTTAAGCCCACACACATCTGAAACTTTACATCTTTAAATAAAGTTCCTAAAGCTGAAAGATCATA-GTTT
TTACTTGTGATTGCTTCCTTTAGGATTGTAGAATCTGTTTCAAAAATCACCT-GTTGGCAGCCAATTTGTGTAGCAATGA
TAGTTGCTTGTTGTATGGCCAAAGCTTCAGCATGTAGAGGACTAGAGACATGGTACATGTTTCCTGCCTCTGCTGCCAGT
AAAGTTCCTTGATCATTTCTAATGGTGAAACCCCAACCTCCTGAGTGTGATTTCTCTGTAAAAGCTCCGTCCATGTTGAT
CTTGAGAATTTCTTTTGGAGGTGCCTTCCATTTATGTGGTTCTTGCTTGCCTATCCCTTCCTTTTTTGGCTTGCCCTTCA
--------------------------------------------------------------------------------
-------------------------------------------------
>chr7B_3020
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-------------------------------------AAA-GACAGAATTCTATTACGATTACTCGCTGGCCATATCACC
AGCAACAGCGTCTAGTACAGGTTGCGGAAAGTGGCCAAGCCAGGTCGCATAGCAGCCACTCTCCATACAGACTCCACTCG
CAGCTAAT-------------------------------ATATGTGCTGCTTTATTACAATCACGGCTACAATAATCCAC
ACTTACAACATTCAGACCTACATACATCTTAAACTTCACATCTGTAAACAAAGTGCCTAAAGCTGAAAGATCATA-GTTG
CTACTTGCTATTGCTTCCTTCAGTGTTGTGGAATCTGTTTCAAATATCACTT-GTTGGCAGCCCAAATGAGTAGCAGTAA
TAGTTGCTTGCTGAAGGGCCAAAGCTTCAGCATGCAATGGACTGGAGACATGACTCAGTTTCCCTGCACCTGCCGCCAGG
AGCGTTCCTTGGTCATTCCTGATGGTGAAACCCCAGCCTCCTGATTGTGTATCTTCAATAAAGGATCCATCTGTGTTTAT
CTTGAGAATTCCCATCGGAGGTGGCTTCCACTTATGTTCCTCTTGCTTGCTCATCTCTTCCGCCTTCGTCTTGTCCTTCA
TGCACATGTTCAGATGATAGTCAATTGAGGATG-----------ATACTTCCTGTATACTTCTAGTGGGTTCATCCTTAT
TAGCTTTATTTCTTTCATGCCACCATAACCATAAAAGTAAGCAAACTTT
>SNPs
-----------------S------S-----------------S-S-----------------SSS---------------
------------S------------S--------------S-----------S---------------------------
-----------------------------------------------------------S--------------------
-----------------------------------------S----------------------S-S-----S-------
-------------------------------------S----------------------SS--------S-S--S----
SSSSS------------------------S------------S-------------------S-----------------
-S-------------------------S--------S----S-------------S-S-----SS--------------S
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
-----S-----------------------S--------------S---------------------------------S-
--------------------------S-----------------------------------------------------
----------------SSSSS---------------------S-------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------SSSSSS
SSSS--------------------------------S----------S--------------------------------
----------------------------------------------------------------S--------S------
---------------------S----------S-----------------------------------------------
----------------------------S---------------------------------------------------
-------------------------------------------------------------------S------------
-------------------------S--------------------S------------------S--------------
--------S--------------------------------S--S-----SSSSS-------------------------
-----------------------------------------S-SS----------------------------S------
---S--S--------------S----------------------------------------------------------
--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------
---------------------S--------------------------S---------S--------------S--S--S
---S---------S----S---------------------S-----------------S---------------------
--------------------------------------------------------------------------------
--------------------------S------S-----------------S--S-------------------------
--------------------------S-----S-----------------SS-----S-----S----------------
S----------------------------SS---S---------S---------------S-------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S----------SSSS--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S------------S------
--------------------------------------------------------------------------------
----S-------------------------------------------------------S------------S----S-
-------------S-------------------------S-S------------------------------------S-
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
SS----------S---------S----------------------S----------------------------------
------------------------------------------------------S--------S----------------
-------------------------------------------S-------------------------S-S--------
---S-------------------S--S-------------------S----------------------------S----
------------------------S-------------------------------------------------------
-------------------------------------------------S---------S---S----------------
----------------------S---------------------S-----------------------------------
--------------------------------S-----------------------------------------------
S-------------------------------S----------------------------------------------S
-------------------------------------------------
>forward_562
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--------------------------------------------------------------CCTCTCATCTCTGCCACG
TG------------------------------------------------------------------------------
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>reverse_2240
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-------------------------------------------------------------------------------G
TCACTAGGATCCAGGGGGA-------------------------------------------------------------
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>forward_1382
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--CCTGATCTGATCCTGTCGGC----------------------------------------------------------
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>reverse_2974
--------------------------------------------------------------------------------
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-------------GAAGCTGCCGTAATCCACCT-----------------------------------------------
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-------------------------------------------------
