>input_sequence_45650
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-------------------------------------------------------------------ATGAGCTACTGCC
AAGCTACAACGTACAAGCCTCTTGGTGGGCTCACTTTGGACAGACCATTAGGCCTTGGGAGAACTTGCAGAATACTTCCT
CAACATCATTCTGTATGGCAACATTTTTCTAGATCTTGCAAGCTGCAAGAGAAAGTATATCCAAGGCTTGTTGTTGCTGC
TTGCCATAAGAGGCTTGGTCCTGTATATGCCTCAAGTGGGAAGGGAAACCT------------TGATGTAAGTAGCATTC
ACAGCTTTCTTA------------------CTTTGTGATTGGTTTTCTATTGGAAACTTGCAACCTCCTTGCAGCTTAGC
AAATTTGTCAAGTTTGACTTTGTTTGGGACAATGGAATTTTCTTATTGATGTTGTAGGAATGCTTTAGTTTCAGGAATTC
CTCTTTGGGAAATAGTGATACGGTGTAAAATGGGGTGTGCTAGGCAGTTGATATGCTACACACCAAGCATATTTAACACA
TCAAGGTTGTTAGGAACAATTGCTCATGTGGAATCATCTGCTACATTTACTGTTGCTTTCTTTTCAGCCATTCTCTATGG
AATCTTTGAACAAAGCAATGGATGGAGCAAAAAAGCAACAGTCTATACAAGGCTTCCTGATGGAGCAAATGGCTAAGATT
ACAGGACAGGGGTCTGGTGGAAATGGAGGGAATAATAACCGTTATGGAGGCAGCGGTGGTGGTCCTGATGGCCCAGATGA
CGAATCTTTCACGGATTCATTGTATGAAGTGGTCCAAGTTGTGTTAGCAACTGTTGCTTTTGTACTCACGGTAATTTCAT
TGCTCCTTTCTTGCTTATCATTGTCCTTCATTCTGAAATGCTATATTTGT-AACGATAGTTCTGTGCAGATTTTTCAATC
TCTTATAATGCCTGAACATACTAG-TTAAGCTAGCATTTTGTTTAGCTTCAGTGCAAACTTTCTGTTGTTTATTCACAAC
CATAAGTTAATGGTACAAATACATTATGGCTATTATATGTTTATTGTTTTGAACACCCCTTTCTCCTTGTGGACTTAGCC
A-GCTCAGAAGGGATAATGTGGATACTTGAAGTACAGAATAGTGATATTTCCATTCTCCATTAGTGAGAAAAC-ATCTGT
GTAGTTCCCGCTTTTGCCAAAGAAGATTTTATTATTTCTTTGTGGCAGCTG-TTTTGTATTTCTCGTAAATATTAATCTA
TGTGGAGTTGTGGACTAACTTACAAGTAAGAAGATAAATTTTACCTTCGTACCAGAGAAGTTTACCAGTAGGAATGTTAG
TTGATTGGTGTACCATCAGTAACACGTGCTCTGTTTTCTGGTGACCATCTTCATCGCTAGTGCTGTTCTAAATATA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TATGG---------------
--------------------------------------------------------------------------------
--------------------------------------GAAACTAAACTTGCATCTGCCAAAGACAAGACTTCCGCCCAA
ATCC--------------------------------TTTTTATTCTTGTTGGTTGTGAA----AAGGA-CCCCCACATTA
TCTTTCTAAACAGCGTTTGCTTTGTTATGCAGTATATCCACATCATCAGAGGAGAGGAGTTGTACCGCCTTGCAAGGGAC
TACACCAGATATGTCGTCACTGGCAAGAGAACGTCCCGGCTGAAGCGTGCCATGCTTAACTGGCGTGATTTCTCAGATAG
CATCACAAAGAATTTCAGCACACAAGACGATGTGTATCGAAGCCCGGTCGCTTCTGA-----------------AGCCCC
AGAAGCTGGTTCATCATCTCGGTGA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>chr2B_1_TraesCS2B01G367100
GCGGCGGAGCCGAGCTCTACTCCTCTTCCCGTGCCTTTTTTTCCTCTCCCTCCCGAGTCCTCCCGACCTA-CCGACGCGG
CTCTGAATCTCTTCTGTAGCATATCCCACAGGCTACAGCTGACGCCTCGATCCCGCCTCCGCCCCCACACGATCCGCCGT
CACCGTTCTTCCTCGCC-GGGACGTCGTGTTCCTGCTGTATCCACCCCGTCCGCAGTCTTTGGCCATTGGGTTTTGAGGT
ATGAGGTTTTACCCTCCACTCCAGCGATTAGATTAATCCTACTGACCTTCACAATTTCCGGGTGTCCTGGTGCGCACCCG
GCACACCATCTAGATCTGCCGCCTGGCTGTCAACCTATGGGCTGTACGTTGTAGGGC-TTTGCTTTGCCCGTGGCATGAT
TTTCTGCTTATTGGGTAGCAC--GTACATTTTAATTTTACCAGGATTCATGTT-AAAGAGTATCGGGAATACAAGGGTAG
AATGCTGCACTTCAGCCTGCATTGGTGTTAAAGTGTGATCTCATAACGGCTGGCTGTTGT-----ATTT-----------
--------------GCAGGCTTAGAATTCCTATAA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------AATTTATTTCAGGTGGGGCTCATAGGCTTCACCTGATCTCCATCATAATCCTCT
CTGAACATCGGGAATTTTGCTCTACCTGGAAATTCCTTTTTCTTCTGCCCAAAATCCTTTCGCGCAGACTCAGTTCATTG
TTTGGGAAATTGTTGACAACATACATGCTTAGTTTAGTTCGTACCTCTTAGCATTAGGGGATTGCGCTGGCCTATTCGTT
CTATAGCAAGATTGTGACTTCTGGTGAATCATCTTGAGCACTGACTACATGTTATGCAAAACGGAGAAATTTATTCTTTT
GAATTAGATTAGTTCAATTGATACTGTTCTAGTGTTGTAGGGTTGTGGATATTTGACATTCTTCTTCCTAATTCAGTATG
TAACCATTCCTATTTTTAACCTCCAGATTTGGCTCTGGTTAATTCTAGAATTCAAGAAGTTGGAAACATGAGCTACTGCC
AAGCTACAACGTACAAGCCTCTTGGTGGGCTCACTTTGGACAGACCATTAGGCCTTGGGAGAACTTGCAGAATACTTCCT
CAACATCATTCTGTATGGCAACATTTTTCTAGATCTTGCAAGCTGCAAGAGAAAGTATATCCAAGGCTTGTTGTTGCTGC
TTGCCATAAGAGGCTTGGTCCTGTATATGCCTCAAGTGGGAAGGGAAACCT------------TGATGTAAGTAGCATTC
ACAGCTTTCTTA------------------CTTTGTGATTGGTTTTCTATTGGAAACTTGCAACCTCCTTGCAGCTTAGC
AAATTTGTCAAGTTTGACTTTGTTTGGGACAATGGAATTTTCTTATTGATGTTGTAGGAATGCTTTAGTTTCAGGAATTC
CTCTTTGGGAAATAGTGATACGGTGTAAAATGGGGTGTGCTAGGCAGTTGATATGCTACACACCAAGCATATTTAACACA
TCAAGGTTGTTAGGAACAATTGCTCATGTGGAATCATCTGCTACATTTACTGTTGCTTTCTTTTCAGCCATTCTCTATGG
AATCTTTGAACAAAGCAATGGATGGAGCAAAAAAGCAACAGTCTATACAAGGCTTCCTGATGGAGCAAATGGCTAAGATT
ACAGGACAGGGGTCTGGTGGAAATGGAGGGAATAATAACCGTTATGGAGGCAGCGGTGGTGGTCCTGATGGCCCAGATGA
CGAATCTTTCACGGATTCATTGTATGAAGTGGTCCAAGTTGTGTTAGCAACTGTTGCTTTTGTACTCACGGTAATTTCAT
TGCTCCTTTCTTGCTTATCATTGTCCTTCATTCTGAAATGCTATATTTGT-AACGATAGTTCTGTGCAGATTTTTCAATC
TCTTATAATGCCTGAACATACTAG-TTAAGCTAGCATTTTGTTTAGCTTCAGTGCAAACTTTCTGTTGTTTATTCACAAC
CATAAGTTAATGGTACAAATACATTATGGCTATTATATGTTTATTGTTTTGAACACCCCTTTCTCCTTGTGGACTTAGCC
A-GCTCAGAAGGGATAATGTGGATACTTGAAGTACAGAATAGTGATATTTCCATTCTCCATTAGTGAGAAAAC-ATCTGT
GTAGTTCCCGCTTTTGCCAAAGAAGATTTTATTATTTCTTTGTGGCAGCTG-TTTTGTATTTCTCGTAAATATTAATCTA
TGTGGAGTTGTGGACTAACTTACAAGTAAGAAGATAAATTTTACCTTCGTACCAGAGAAGTTTACCAGTAGGAATGTTAG
TTGATTGGTGTACCATCAGTAACACGTGCTCTGTTTTCTGGTGACCATCTTCATCGCTAGTGCTGTTCTAAATATA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TATGG---------------
--------------------------------------------------------------------------------
--------------------------------------GAAACTAAACTTGCATCTGCCAAAGACAAGACTTCCGCCCAA
ATCC--------------------------------TTTTTATTCTTGTTGGTTGTGAA----AAGGA-CCCCCACATTA
TCTTTCTAAACAGCGTTTGCTTTGTTATGCAGTATATCCACATCATCAGAGGAGAGGAGTTGTACCGCCTTGCAAGGGAC
TACACCAGATATGTCGTCACTGGCAAGAGAACGTCCCGGCTGAAGCGTGCCATGCTTAACTGGCGTGATTTCTCAGATAG
CATCACAAAGAATTTCAGCACACAAGACGATGTGTATCGAAGCCCGGTCGCTTCTGA-----------------AGCCCC
AGAAGCTGGTTCATCATCTCGGTGACCTTTTCCGAGGCAACCTGCGTCCACATGCCCAGGAATCTTAAACCATAGCATTC
CACGGTTGCCTTCGAATTTTCACCTCAGAAACTTCTGTTTCTGATCATCTAGTTTATGCCAGTGCTAAGTAAATGGACGC
AACTAGACGATCAGCTGTTGTTTCTGCCGGATGGCGATTATTGCCTAGCAGTACTGAGATTCATTCATATGATGTCATGA
TGTCTCTGTCT-----GTATTGACTACAGAACAGGAGGGGCACGAGTTAATTCTTGTCAGCTTTGAAGGTCAT---GTAA
CGTAACATCATTGCTATGGTCGCCTGCTCGTCAATAGGGTGCAGCA----GCAGCTGGCAGCTTGAATGCCGAATCTGAT
GGATCAGAACCGCAAAAGGTCCAAGTACTGTCAGTTAGTCAATGCGGCAAAGAAGTGTACTGCCTTCTATAAAGAATGTT
GTGGTGTTGTCAGTGTGATTTGCTCTCGCATGGGCCATGGTAGTTCAGTTTGCCTAGCCTATTTGAGTTTAACTGCAGAG
ACTTGCAAGATAACCTTTCCCTTTGTTGCTGTCTTTATGTACTGTACTACTGTATATCAGAATGCAGTTTGGCTCT----
-----GC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AGGCGCCATGAACAAGTCAAA
TGAATCATGGAGCACTCCATAAACTGAATAAGA-----------------------------------------------
----------------------------------------TTATTATACATTCTTGATGGGCCATTTAGGCGGGTCTGAA
GGGTGCTATTGTTTTTGGAAAGGAGGATAACCCTGGGAGGCCTCAGCATCGATCGACACACAGCCATTTGTCTGAACGGT
GGTCTGGTTAGGAGAAAACTTGACTAACCCGGTTGTGCACGTCATTCA--------------------------------
---AATACTAATAGATTGGAGGCAGTAACGAC-GAAGTGCACTTTGGCTTGTGTCACTCAAACTGCCCACGAATGTG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GCAGACAAAGGCT
CTTAACACCGTGATTTCCGGAGGAATGATGCGGCCGAAAGCCAGTTGGACGACCAGGCGAATTAGCTGATAGAGCTAAGC
ACATGGCTGGG
>chr2A_1
GCGGCGGAGCGGAGCCCTACTCCTCTTCCCGT-CCTTTCTTTCCTCTCCCTCCCGAGTCCTCCCGGCCTACCCGACGCGG
CTCTGAATCTCTTCTGTAGCATATACCACAGGCTACAGCTGACGCCTCGATCCCGTCCCCGCCCTCACACGACCCGCCGT
CACCGTTCTTCCTCGCC-G-GACGTCGCGTTCCTGCTGTATCCACGCCGTCCGCAGTCTTTGGCCATTGGGTTTTGAGGT
ATGAGGTTTTACCCTCCACTCCGGCGATTTGATTAATCCTACTGACCTTCACAATTTCCGGGTGCCCTGGTGCGCACCAG
GCACACCATCTAGATCTGCCGCCTGGCTGTCGACCTATGAGCTGTACGTAGTACGGC-TTTGCTTTGCCCGTGGCATGAT
TTTCTGCTTGTTGGGTAGT---AGTACATTTTAATATCACCAGGATTCATGTTAAAAGAGTATAGGGAATACAAGGGTAG
AATGCTGTACTTTAGCCTGCATTGGTGTTCAAGTATGATCTCGTAACGATTGTCTGTTGT-----CTTTACTTAGCTTTT
GGGGTAGTTCTGTGGCAGGTTTGGAATTCCTATAA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------AGTTGATTTCAGGTGGGGTTCATAGGTTTCACCTGATCTCCATCATAATCCTCT
CCGAACATCGGGAATTTTGCTCTACCTGGAAATCATTTTTTCTTCTGTCCAAAATCCTTTCACATGGACTCAGTTCATCG
TTTGGGAAACTGTGGACAACATACATGCTTAGTTTTGTTCG-------TAGCATTAGTGGATTGTGCCGGCCTATTCCTT
CTATAGCAAGACTCTGACTTCTGGTGAATCATCTTTAGCACTGACTACATGTTATGCAAAACGGAGAAATTTATTCTTTT
GAATTAGATTAGTTCAACTGATACTGTTCTATTGTTGCAGTGTTGTAGATATTTGACATTCTTCTTCCTAACTCAGTATG
TAATCATTCCTATTTTTAACCTCCAGATTTGGCTCCAGTTAATTCTAGAATTCAAGAAGTTAGAAACATGAGCTACTGCC
AAGCTACAACGTACAAGCCTCTTGGCGGGCTCACTTTGGACAGACCATTAGGTCTTGGGAGAACTTGCAAAATACTTCCT
GAA---CATTTTGTATGGCAACATTTTTCTAGATCTTGCAAGCTGCAAGAGAAAGTATATCCAAGGCTTGTTGTTGCTGC
TTGCCATAAGAGGCTTGGTCCTGTATATGCCTCAAGCGGGAAGGGAAACCT------------TGATGTAAGTATCATTC
ACAGCTTTCTTA------------------CTTTGTGATTGGTTTTCTATTGGAAACTTG------------------GC
AAATTTGTCAAGTTTGACTTGGTTTGGCACAATGGAATTTTCTTATTGATGTTGTAGGAATGCTTTAGTTTCAGGAATTC
CTCTTTGGGAGATAGGGATACTGTGTAAAATGGGGTGTGGTAGGCAGTTGATATGCTACGCACCAAGCATATTTAATACA
TCAAGGTTGTTAGGCACAATTGCTGATGTGGAACCATCTGCTAAATTTACTGTTGCTTTCTTTTCAGCCATTCTCTATGG
AATCTTTGAACAAAGCAATGGATGGAGCAAAAAAGCAACAGTCCATACAAGGCTTCCTGATGGAGCAAATGGCTAAGATT
ACAGGACAGGGGTCTGGTGGAAATGGAGGAAATAATAACCGTTATGGAGGCAGCGGTGGTGGTTCTGATGGCCCGGATGA
CGAATCTTTCACGGATTCATTGTATGAAGTGGTCCAAGTTGTGTTAGCAACTGTTGCTTTTGTACTCACGGTAATTGCAT
TGCTTCTTTCTTCCTTCTCATCGTCCTTTGATCTGAAATGCTATATTTTACAACTATAGTTCTGTACGGACCTTTCAATC
TCTTATAATGCCTAAACATACTACATTAAGCTAGCATTTTGTTTATTTTCAGTGCAAACCTTTTGATGTTTATTCACAGC
CGTA-GTTGATGGTACAAATATGTGATGGCTATTATATGTTTATTATTTTGAACAGCCCTTTCTCCTTGTGGACTT-GCC
A-GCTCAGAAGGGATAATATGTATACTTGAAGTACATAATAGTGATATTACCATTCTCCATTAGTGAGAAAAC-ATCCGT
GTAGTTCCCGCTTTTGCCAAAGAAGATTTTATTATTTCTTCGTGGCAGCTG-TTTTCTATTTCTCGTAAATATTAATCTA
TGTGGAGTTGTTGACTACCTTACAAGTAAAAAGATAAATTTACCCTTCTTACTAGGGAAGGTTACTATTATGAATAGTAA
TTGATTGGTGTACCATTACTAACATTTGCTCTGTTTTCTGGTGATCATCTTCATTAGTAGTGCTGTTCTAAATATACTCC
CTCCGTCCGGTAAAGAGTGTACATCTAGAAGTTTTAGGACAAATTATGGAGTTGAGTAAAAAATGCATTGGAAAGGTGCA
AACCACCATCTCTCTCCTTTTTAATTACCCAACCCCCAATGAGCTAAGTGCATGTAGAAATTAAGAAGACTATGTGTAGA
TTGCTATTGGTCTTGATTACCGTGTGGTGAGAGAGAAGTATTTTTTTCCTACTTTAAAGTACATTGGGAAGATAGAAGTA
CACTCTTTGGTGGACAAAATTTGAAACTAGATGTACACTCTTCACCGGACGGAGGGAGTATATGG---------------
--------------------------------------------------------------------------------
--------------------------------------TAAATTAGACTTGCATCTGCCAAAAACAAGACTTCCACACAA
TTTTCTTCCCACCACAACACACCGAACACGAGTGTGTTTATATTCTTGTTGGCTGTGAACGTTAAGGACCCCCCACATTA
TCTTTCTAAACAGCGTTTGCTTTGTTATGCAGTATATCCACATCATCAGAGGAGAGGAGTTGTACCGCCTTGCTAGGGAC
TACACCAGATACCTCGTCACTGGCAAGAGAACGTCCCGGCTGAAGCGTGCCATGCTTAACTGGCGTGATTTCTCAGATAG
CATCACAAAGAATTTCAGCACACAAGACGATGTGTATCAAAGCCCGGTCGCTTCTGAAGCCATGTGGTGGCAACAGCCCC
AGAAGCTGGTTCATCATCTCGGTGACCTTTTCAGAGGCAACCTGCGTCCACATGCCCAGGAATCTTAAACCCTAGCATTC
CACGGTTGCCTTCGAATTTCCACCTCAGAAACTTCTGTTTCTGACCATCTAGTTTATGCTAGTGCTAAGTAAATCGACGC
AACTAGACGATCAGCTGTTGATTCTGGCGGATGGCGATTCTCGCCTAGT-GTACTGAAATTCATTCATATGATGTGATGC
TGTCTCTGGTCTGTACGTATTGACTACAGAACAGGAGGGGCAGGAGTTAATTCTTGTCAGCTTTGAAGGTCATCATGTAA
CGTAACATCATTGCTATGATCGTCTGCTCGTCAATGGGGTGCTGCA----GCAGCTGGCAGCTTGAATGCTGAATCTGAT
GGATCAGACCTGC-AAAGGTCCAGGTACTGTCAGTTAGTCAATGCGGCAAAGAAGTGTACTGCCATCTATAAAGAATATT
GTGGTGTTTTCAGTGTGATTTGCTCTCCCATGGGCCATGGTAGTTCATTTTGTCTAGCCTATTTGAG-TTAACTGCAGAG
ACTTGCAAGATGACCTTTCCATTTGTTGATGTCTTTATGTATG------CACTATATTAGACTGTTGTTTGGCTCTATTC
ATTTTGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AGGCGCCATGAACAAGTCAGA
TGAACCATGGAGTACTCCATAAACTAAATAAGA-----------------------------------------------
----------------------------------------TT---ATACATTCTTGATGGGCCATTTAGGCGGGTCTGAA
GGGTGTTCTTGTTTTTGGAAAGGAGGATAACCCTGAGTGGCCACAGCATCGATCGACACACTGCCATTTGTCTGAACGGT
GGTCTCGTTAGGAGAAAAGTTGACCAACCCGGTTGTTCACGTCATTC--------------------------AACTAGT
ACTGAAGCTAATAAACTGGAGGCAGAAACCAACAAACTTCA------CTTGTGTCATTCAAACTGCCCACGAATGTACTC
CCTTCGTTCCAAATTACTCGTCGCAGAAATAGATATATCTAGAACTAAAATACATCTAGATACATCCATATCTGTGACAA
GTACTTCCTCCGTTCCAAATTACTTGTCTTATATTTGTCTAGATACGAAGGTATCTAACACTAAAATGAGTTTAGATACA
TCCGTATTTAGACAAATCTAAGATAAATAATTCGGAACGAAGGGAGTAATTCGGAAGAGAGGGAGTAGCAGACAAAGGCT
CTTAACACCGCGATTTCCGGAGCAATGATGCGGCCGAAAGCCAAGACGACGACCAGACGGATTAGCTGATAGAGCTAAGC
ACATGGCTG--
>chr2D_1
GCGGCGGAGCCGAGCTCTACTCCTCTTCCCGTGCCTTTCTTTCCGCTCCCTCCTGAGTCCTCCC----------------
-TCTGAATCTCTCCTATAGCCTATACCACAGGCTACAGCTGACGCCTCGATCCCGCCCCCGCCCCCACACGACCGGCCGT
CACCGTTCTTCCTCGCCGG-GACGTCGCGTTCCTGCTGTATCCACCCCGTCCGCGGTCTTTGGCCATTGGGTTTTGAGGT
ATGAGGTATTACCCTCCACTCCAGCAATTAGATTAATCCCACTGACCTTCACAATTAAGGGGTGTCCTGGTGCGCACCCG
GCACACCATCTAGATCTGCCCCCTGGCTGTCGACCTATGAGCTGTACGTAGTACCGGTTTTGCTTTGCCCGTGGCATGAT
TTTCTGCTTGTTGGGTAGTACGAGTACATTTTAATTTTAC------------T-AAAGAGTATCGGGAATACAAGGGTAG
AATGCTGCACTTCAGCCTGCATTGGTGTTCAAGTGTGATCTCATAACGGTTGGCTGTTGTGTTTGCTTTACTTAGCTTTT
GGGGTAGTTTTGTGTCAGGCTTGGAATTCCTAAGTACTCCCTCAGTTCACAAATATAAGATGTTCTAACTTTTTTCTGAA
TCGGATGTATATAGACAAGTTTTATGTGTTTGTTCATTCATTTCAGTCCGTATGTTAGTTCATATTGAAATATCGAAAAC
ATCTTATATTTGTGAACAGAGGAAGTAGTTGATTTCAGGTGGGGCTCATAGGTTTCACCTGATCTCCATCATAATCCTCT
CTGAACATCAGGAATTTTGCTTTACCTGGAAATTCTTTTTTCTTCTGCCCAAAATCCCTTCACACGGACTCGGTTT-TTG
TTTGGGAAGTTGTTGACAACAAACATGCTTAGTTTAGTTCG-------TAGCAGTAGGGGATTGCACTGGCCTATTCGTT
CTATGCAAAAGGTAGA--------------------------------------------------AATTTCATTGTTTT
GAAGTAGATTAGTTCAATCGATACTTGATAC---------TGTTGTGGATATTTGACATTCTTCCTCCTAATTCAGTATG
TAAGCATTCCTATTTTTAACCTCT--ATTTGGCTCTGGTTAATTCTAGAATTCAAGAAGTTGGAAACATGAGCTACTGCC
AAGCTACAACGTACAAGCCTCTTGGTGGGCTCACTTTGGACAGACCATTAGGTCTTGGGAGAACTTGCAAAATACTTCCT
CAACAT---TCTGTATGGCAACATTTTTCTAGATCTTGCAAGCTGCAAGAGAAAGTATATCCAAGGCTTGTTGTTGCTGC
TTGCCATAAGAGGCTTGGTCCTGTATATGCCTCAAGCGGGAAGGGAAACCTTGATTTTGTCAATGATGTAAGTAGCATTC
ACAGCTTTCTTATGATTGATCATTTACTTACTTTGTGGTGGGGTATCTATTGGAAACTTGCAACCTCCTTGCAGCTTAGC
AAAATTGTCAAGTTTTAATTGGTTTGGCACAATGGAAGTTTCTTATTGATGTTGTAGGAATACATTAGTTTCAGGAATTC
CTCTTTGTGAAATAGGGATATGGTGTAAAATGGGTTGTGCTGGGCAGTTGATATGCTACACACCAAGCA---------CA
TCAAGGTTGTTAGGCACAATTGCTCATGTGGGACCATCTGCTAAATTTACTGTTGCTTTCTTTTCAGCCATTCTCTATGG
AATCTTTGAACAAAGCAATGGATGGAGCAAAAAAGCAACAGTCTATACAAGGCTTCCTGATGGAGCAAATAGCTAAGATT
ACAGGACAGGGGTCTGGTGGAAATGGAGGAAATAATAAACGTTATGGAGGCAGTGGTGGTGGTTCTGATGGCCCAGATGA
CGAATCTTTCACGGATTCGTTGTATGAAGTGGTCCAAGTTGTGTTAGCAACTGTTGCTTTTGTACTCACGGTAATTGCAT
TGCTCCTTTCTTCCTTATCATTGTCATTCTTTCTGAAATGCTATATTTGT-AACGATAGTTCTGTGCAGATTTTTCAATC
TCTTATAATGCCTGAACATACAACATTAAGCTAGCATTTTGTTTATTTTCAGTGCAAACTTTTTGTTGTTTATTCACAAC
CGTA-GTTGATGGTACAAATACATCATGGACATTATATATTTATTC-----AACACCCCTTTCTCCTTGTGTACTTTAGC
TGGCTCAAAAGGAATAAGGTGGATCAGTGAAGTACAGAATGGTGATATTTCCATTCTCCATTAGTGAGAAAACCATCCGC
GTGGCTCCCGCTTTTGTAAAGGAGATCTCA--TATTTCTTCATGGCAGCTATTTTTGTATTTCTCATAAATATTAATCTT
TGTGGA--------CTAACTTATAAGTAAAAAAGATAAACTACCCTTCGCACTAGAGGAGCTTACCAGTAGGAATGTTAG
TTTATTGGTGTACCATTAGTAACATGTGCTATGTTTTCTCATGATCATCTTCATTACTAGTGCTGTTCTAGATATA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TACTCCCTCCGTCCGGAAAT
ACTTGTCATCAAAATGGACAAAAAGGGATGTATCTAGAACTAAAATACATCTAGATACATCCCCTTTTATTCATTTTGAT
GACAAGTATTTCCGGACGGAGGGAGTATGTGATAATGTGAAACTAAACTTCCAGCTGCCATAGACAATACTTCCGCACAA
ATCTTTTTCCGCCATAACACACGTAACATGAGTGTGCTCATATTGTTGTCGGCTGTGAACCTTAAGGA-CCCCCACATCA
TCTTTCTAAACAAGGTTTGCTTCATTATGCAGTACATCCACATCATCAGAGGAGAGGAGCTGTACCGCCTTGCAAGGGAC
TATACCAGATACCTCGTCACTGGCAAGAGAACGTCCCGGCTGAAGCGTGCCATGCTTAACTGGCGTGATTTCTCAGATAG
CATCACAAAGAATTTCAGCACACAAGACGATGTGTATCGAAGCCCGGTCGCCTCTGAAGCCATGTGGTGGCAACAGCCCC
AGAAGCTGGTTCATCATCTTGGTGACCTTTTCAGAGGCAACCTGCGTCCACATGCCCAGGAATCTTAAACCCTAGCATTC
CACGGTTGCCTTCGAATTTC---------------TGTTTCTGATCATCTAGTTTATGCCAGTGCTAAGTAAATCGACGC
AACTAGACGATCAGCTGTTTTTTCTGGCGGATGGCGATTCTCGCCTAGT-GTACTGAAATTCATTCATATGATGTGATGC
TGTCTCTGGTCTGTACGTATTGACCACAGAACAGGAGGGTCAGGAGTTAATTCTTGTCAGCTTTGAAGGTCATCATGTAA
CGTAACATCATTGCTATGATCGTCTGCTCGTCCATGGGGTGCTGCAGCTGGCAGCTGGCAGCTTGAATGCTGAATCTGAT
GGATCAGAACTGC-AAAGGTCCAAGTACTGTCAGTGAGTCAATGCGGCAAAGAAGTGTACTGCCATCTATAAAGAATGTT
GTGGTGTTCTCAGTGTGATTTGCTTTCCCATGGGCCATGGTAGTTCAGTTTGTCTAGCCTATTTGAG-TTAACTGCAGAG
ACTTGCAAGATAATCTCTCCATTTGTTGCTGTCTTTATGTACTCTACTACTCTCTCCGATCCGAAATATAAGTCTTTTTA
GAGTTTCCAACAAAGAACTACGTACGGAGCAAAATGAGTGAATCTACACTCTAAAATATGTCTACATATATTCGTATGTT
GTAGTCCATTTGAAATCTCTAAAAAGACTTATACTCCCTCCGTTCTTAAATATAAGTCTTTTTAGACATTTCAAATGGAC
TACAACATACGGATGTATGTAGACATATTTTAGAGTATAGATTCACTTATTTTGCTCCGTATGTAGTCACTCGTTGAAAT
CTCTAAAAAGACTTATATTTTGGAACGGAGGGAGTATTTAGGAACGGAGGGAGTATATAAGGTGCCATGAACAAGTCAAA
ACCATGTCCCCCTCCCTGAATTCAACTGGGGTGGGCCTCTTCATCCCCCTGTTACCAATCATAATCCCCCACATCAGCTT
GTTTGTAAAAAAATAACCTTTTTATAATGTAGTATTACTCTT---ATATATTCTTGATGGGCCATTTAGGCAGGTCTGAA
GGGTGCTCTTTTTTTTGGAAAGGAGGATAATCCTGGCTGGCCTCAGCATCGATCGACACACAGCCATTTGTCTGAACGGT
GGTCTGATTAGGAGAAAGCTTGACTGACCCGGTTGTTTGCGTCATTCAACTGTACTAATACTCCCCTAAAGAAAACTAGC
ACTAATGCTAATAGATTGGAGGCAGAAACGAAGGAAGTGCACTTTGGCTTGTGTCAATCAAACTGCCCATGAATGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AGCAGACAAAGGCT
CTTAACACCGCGATTTCCGGAGC-----------CGAAAGCCAGGAGGACGACCAGACGAATTAGCTGATAGAGCTAAGC
ACATGGCTGGG
>SNPs
--------------------------------------S--------------------------S--------------
------------------------S--------------------------------S--------------S-------
-------------------S-------S----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S-------S---------S---S--------------------------
---------S--------S-------------------------------------------------------------
-----------------------------S-------------------S---------------S--------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S--S---------------------S---------------------------
-----------------------------------S-------------------------S-S-S--------------
-----------------------------------------SSSSSSS--------------------------------
-----------S-S---------------------S--------------------------------------------
-------------------------------S-----S--S---------------------------------------
---S----------------------------------------------------------------------------
----------------------------------------------------S----------------S----------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------S------S----------------------------------------------------
---------------S------------------------------------------------------------S---
--------------S------------------S---------S------------------------------------
--------------------------------------------------------------------------------
-----------------------------S---------------------------------S----------------
----------------------------------------------------------------------------S---
------------S----------------S--------------------------------------------------
-----------------------S---------------------SS---------------S-----------------
-S--S---S---------------S--------------------S------------------------------S---
-----------------------------------------------------------------------------S--
----------------------------------------S---------------------------------------
-----------S-----------------S-----------SS---------S-------S-------------------
----------------S-------S-------------------S---------SS------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
---S-----------------------------------S------------S---------------------------
--------------------------------------------------------------------------------
-----------SS-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S--------------------------------------S--------
-------------------S------------------------------------------------------S-----
--------------------------S------------S-S------SS-------S-----------------S---S
--------SSS-------------------------------S-------------------------------------
------------------S---S------------S------S---------------------------S---------
----------S--S--------------------------------------------------S---------------
--------S------------------S------------------------S--------------S------------
--------------------S----------------------S-------S-----S---S--S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S------------S------------------------------------------------------
------------------------------------------SSS-----------------------------------
-------S-----------------------------S------------------------------------------
------------------------------------S-------------------------------------------
------S------------------S-----S------------------------S-------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-----------S---------------------SS----------S-----------------------
-----------
>forward_39
-------------------CTCCTCTTCCCGTGCCTTTT-----------------------------------------
--------------------------------------------------------------------------------
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-----------
>reverse_1904
--------------------------------------------------------------------------------
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---------------------------------------------------------------CCTGATGGCCCAGATGA
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>forward_1870
--------------------------------------------------------------------------------
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----------GGTCTGGTGGAAATGGAGGG--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------
>reverse_5006
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGGACGACCAGGCGAATTAG---------------
-----------
