>input_sequence_45611
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ATGACTTCGCCGTCCGCCCCCGTCCTCCAC
CGCCAAATCCTGCCCAGACCCTTAGTACCCTCCTGCCGCGTCTCGCCCCGCACCCCCGCATCCGTCGCGGCGCAGCCGTC
GCCGTCGCCGAGGAGAATATGGCGCCTGCCCCTGCTCCGATCGTCGCTGCCTCCCGAAGGTGCGCGCGCGCCGCCACGCA
CCTGCAATATTCCCGGTTTCCTTCCGCACATCTGACGCGCATCCGTCGTCCTAGGATCCCCGGCGGAGCTTGTAGCAGAG
GACTCCAAGTTCGTGCCGCTGAACGCCGAGGACCCGATGTACGGACCGCCGGTGAGTCGCCGCCAGTTGCGCGTTACAAG
AGAGTGTTATTCCACGCCCCCGCTGCATAT----ACATATAGCTTCTGTTGCCGGTGAAATATAGTGATTTTGTTTACTT
CGAAATGCTGAGATCAGTGTCACTGAATTGTGACCCCATTTCAGGCATTGTTGCTCATCGGATTCGATAAAAGCGAGACC
GTCAAGGTATTCGGTTCACAGGATTGTTTGAACCCGCGTGATGCTTGCATGCCGATATTGACAGATAGAACG-TAATTTA
CAAGTAATTCCTGTGAATTTTCGTAACTAGAGCAGATTCAGGAGTTCCTAAAGGAGCTGGACGGTGATTTCCTCAAGGTA
ATTAAGTTTTGCGCCTGCTGTAACAGAAGTTTACAGAGAAAGGAACAGGTTCG---GTACATTTAACTGCAGAAGAATAG
AGATTGAAC-AAATACGAGTCTTCTCCACCGTTAAAAAAATAGTCGTCTTCTCGATTACAGTAAGGAATAAGATCAAGAA
ATGAGTCTAGAAAAAAAACCACTGAAATG--GAGTAGCGAAAGCTTACTCTCATTCAGAAACAAACATGTGAGACGAAAA
TACTGTAGAATGTTTGTCATGCGATCCTGATAGTTCAGCCAAACTTGTTCTTGCGTCAGGTGATTCATTGTACAGAAGAA
ATGACGAAACAAACTTTGTGGGATGCTATGCACACTGAGCAGCCTAATGTAGAAGCTGTCAAGGTAACAACACTTGCAAA
CATGACATTTTCAGTCTTTACTGCCCTTACTTACACTCTTGTGCTGAAATAACAGCCTTGCCAAATGCCTTCAATCACTT
CTTTCATAGCCTTAAATTTTACCGTGGATCGCTAGTTAACATGCGTGTTCGGTTCACAGATTATGAAATCTCCGCAGAGA
ATATGCATCTTTTCTGGTCTGACCGGTGAGGAGATGATGATGTTCATCAACGCCTTCCCAGAAACAGGTACTAGTTCCTT
AGTCCTAGGTCAAAGGAAATTCAGAAACTGTAAGAGAAAAAACAGCGTCTTTCCACACACTCAAACAAAAGACTGTGTGA
CGAAATAAATTCTAGTGTGGAAGCTTTATCTCAGGCCGTGTGTCATCAAACTGACGAGCTGTTGCTCACTGTTCAGGGTT
GGAACAAGCCGCTTTCGCAGCACTTGTTCCCAACAGCGCAGAGAAGGTTCTTGCTGAGGTGATCGAGGAAATAATGGGTG
ACCATGAGATGCTGGTTTGTTGCTTCTGACTACTGCCAACTTCTGTGTTCTTCTTCTGCCTTCAG---TACCTGCAGACC
GAATGAGTTTTTTGCTTTCTTGCTTCACTACCTGCAGACGGGAAAGAATTCAGCATGA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr1D_1_TraesCS1D01G208800
TTTGTCTCTGACGGATCTCGTAGATACCATGGGATTCGGTCGGCGTTTGTCTTAGGTGGATCCACGTGGACCCGGTCTTC
GTTCTTCTATATTCGTGTGTCTACAGGATGGATACTTCTGATCTATGTTTCTCTTCATCGGTGGTGG-TTGTTGTTCTGG
TGCGTTGGTCCTATGGGGCGTTAGCATGATGATTTTCTGACTGTCTACTACAACAATGTTTGCCCAGCTCCGATGTGAGA
GGGGCGATGACGCCCGATGCGCCTTTGGCTCGCTTCAGTGTATGTAGTCGTCGCTAGGTGGTCTATGAACCGGAATGTAT
TTTTTACTTCTGATATTCTTTGTACTATCTTGACGGTTGACGAATAGATTGGAGTTTTTCC-------AAAAAAAAGGCC
GGGTCCTCTAAACCCGTCGTAAATTTTTAGGTGACGAGTTTTAAGGATCTATTTGGTTAGACGTCTCGGGCACCGCAGCA
AAATTTACAGCCCGTCTGAGTTTTGCTAAGCAAAATTCACTTTTCTAACCTGTGGACGTAACAATATCACAAAATGAACC
GGTGACGAAATTTTTTCATCCGGCTGATCTTTTTGTGTATCGCCAGACAGTTAGACACCACATTACACTGTGCAGTGTCT
GGCTCCCACGCCCTACACGCCTAGTCAACTACAA-TGTGTCGTGCCACTAGTGCGACGCTTACACTGCATAGTGTAGCGT
CTAGCTCTCAGGCGTTACACATTGATGTAGCATTTTTCAGGCAGTCTGGAGTGCGATGCCGGCTAGACGTGAGCGTTGTA
CAGTGTAGTGTGTCTCCTAACGGGCGCTACACAAAAGGTCAGCCGGATGAATTTTTTTCGTGATATTTTTTCGTCCACGG
-GTCAAATTTGTTGTTTCTGCCGTTTTGCTAGACGTGGCTTCAGACGAAACCCTGACGGAACATAGACCACGTACAAAAC
CACACAAACACACAAGGATAACGTCGCCGTCGTCCTCGCCGCCGGCGCCGATGACTTCGCCGTCCGCCCCCGTCCTCCAC
CGCCAAATCCTGCCCAGACCCTTAGTACCCTCCTGCCGCGTCTCGCCCCGCACCCCCGCATCCGTCGCGGCGCAGCCGTC
GCCGTCGCCGAGGAGAATATGGCGCCTGCCCCTGCTCCGATCGTCGCTGCCTCCCGAAGGTGCGCGCGCGCCGCCACGCA
CCTGCAATATTCCCGGTTTCCTTCCGCACATCTGACGCGCATCCGTCGTCCTAGGATCCCCGGCGGAGCTTGTAGCAGAG
GACTCCAAGTTCGTGCCGCTGAACGCCGAGGACCCGATGTACGGACCGCCGGTGAGTCGCCGCCAGTTGCGCGTTACAAG
AGAGTGTTATTCCACGCCCCCGCTGCATAT----ACATATAGCTTCTGTTGCCGGTGAAATATAGTGATTTTGTTTACTT
CGAAATGCTGAGATCAGTGTCACTGAATTGTGACCCCATTTCAGGCATTGTTGCTCATCGGATTCGATAAAAGCGAGACC
GTCAAGGTATTCGGTTCACAGGATTGTTTGAACCCGCGTGATGCTTGCATGCCGATATTGACAGATAGAACG-TAATTTA
CAAGTAATTCCTGTGAATTTTCGTAACTAGAGCAGATTCAGGAGTTCCTAAAGGAGCTGGACGGTGATTTCCTCAAGGTA
ATTAAGTTTTGCGCCTGCTGTAACAGAAGTTTACAGAGAAAGGAACAGGTTCG---GTACATTTAACTGCAGAAGAATAG
AGATTGAAC-AAATACGAGTCTTCTCCACCGTTAAAAAAATAGTCGTCTTCTCGATTACAGTAAGGAATAAGATCAAGAA
ATGAGTCTAGAAAAAAAACCACTGAAATG--GAGTAGCGAAAGCTTACTCTCATTCAGAAACAAACATGTGAGACGAAAA
TACTGTAGAATGTTTGTCATGCGATCCTGATAGTTCAGCCAAACTTGTTCTTGCGTCAGGTGATTCATTGTACAGAAGAA
ATGACGAAACAAACTTTGTGGGATGCTATGCACACTGAGCAGCCTAATGTAGAAGCTGTCAAGGTAACAACACTTGCAAA
CATGACATTTTCAGTCTTTACTGCCCTTACTTACACTCTTGTGCTGAAATAACAGCCTTGCCAAATGCCTTCAATCACTT
CTTTCATAGCCTTAAATTTTACCGTGGATCGCTAGTTAACATGCGTGTTCGGTTCACAGATTATGAAATCTCCGCAGAGA
ATATGCATCTTTTCTGGTCTGACCGGTGAGGAGATGATGATGTTCATCAACGCCTTCCCAGAAACAGGTACTAGTTCCTT
AGTCCTAGGTCAAAGGAAATTCAGAAACTGTAAGAGAAAAAACAGCGTCTTTCCACACACTCAAACAAAAGACTGTGTGA
CGAAATAAATTCTAGTGTGGAAGCTTTATCTCAGGCCGTGTGTCATCAAACTGACGAGCTGTTGCTCACTGTTCAGGGTT
GGAACAAGCCGCTTTCGCAGCACTTGTTCCCAACAGCGCAGAGAAGGTTCTTGCTGAGGTGATCGAGGAAATAATGGGTG
ACCATGAGATGCTGGTTTGTTGCTTCTGACTACTGCCAACTTCTGTGTTCTTCTTCTGCCTTCAG---TACCTGCAGACC
GAATGAGTTTTTTGCTTTCTTGCTTCACTACCTGCAGACGGGAAAGAATTCAGCATGAAGGTAGTATGTCTCAGGTAGTG
ACCTGTCCGCAGAGACAAAATCAGGCAGCATTGAACTGATCCTCAAATGGTCTCTTGAAATCGCCCGCTCCAAGTGATCC
ACCGTGT-AAATGTCAATCCTTCGACTGTCTCCATCTGCTGGTAAATGTTAATC-----------------------TAC
TAGCTACTGTTTCAAACCCGC----------------------AGCTGCAAGCCCTGCAGCTAGATCACTGTTCATTTGA
AACTGAGATGAACATTACTGAGGCTT---TTCTTGACGTAACCATGTAATTACAATCTTTTTTGTTGGAAGCACTTAATT
CTTGGACAGTTCTTCTGGTGTTCGATTAAGGCACAGAATCTCTCAGCATGCCTATCCACATACAACTTTTATTCCTTTTT
ACTCCATGAAAAGGATGGTACTCTGTATCCTTTGCTTCAACCGTGGTGCTACAGTGTAGTGAATAATTCTACTGTCTACA
ATGAATAATACTATATTTTTTTGCGGGAAACAATGAATAATACTATTGTCTTTCTTGAAGTAGTACGGATGAGGATCCTG
GCATGTGAGAAGTTTGTTTAATCATCTGTGTAAGACAATTATATCATGAGTTATGCGGTAAGAG-TTTGCTATCTCTTTG
TATATACAAGTCCTACTTGGCGGCAAAGTGATCTGAAAACAATGTAACCAAATGGTAGAGAAGATAAAATAGCAAGCCTT
GTTCTTGTCGCCTCTCTGGCTGTGCCT------CCGAGGAGGGGTGAGGAAAGGGGGTGGATGGTGGTTTCTGGTGTGCA
---GATACTATATTCTCAAGTAGCACTCATGATCAAGGGTTGTTTTCCATACACCAATAATCAAAAAATTAAGTTGGGCG
ATATTGTTCTCTATAGCTGTGTAAGATAACACCTGAATCATTCGCGTTTAAATCACATTTTAAAGTGCTAGAGTTAAAAG
AATGATGATGATATGGTTATAGCAAAACTGAAAGTGAATTTTAGTCACAAGGCACGCGGATATTCATGCCAAAATAC
>chr1A_1
TTTGTCTCCGACGGATCTCATAGATCTCATGGGATTCAGTCGGGATTTGTCTTAGGTGGATCCACGTGGATCCAGTCTTC
GTTCTTCTGTGTTCGTGTGTCTACATGATGGATACTTCTGATCTATGTTTCTCTTCATCGGTGGCGGTTTGTTGTTCTGA
TGCGTTGGTCCTATGGGGCTTTAGTACGATTACTTTCCGACTGTCTACTACAACAATATTTGCCCAAGTCTGATGTG-GA
GGGGCGATCACG-CCGATGCGCCTTTGGCTCGCTCCAGTGCCTGTAGTCATTGCTAGGTGGTCTATGAATCTGAATATTT
TTTTTATTTCTGATGCTCTTTGTACTATCTTGACCGTTAATAAATAGATTGGAGTTTTTCTCGTAAAGAAAAGAAAAGTC
AGATCCTCTAAACCCGTCGTAAATATTTAGGTGATGAGTTTTAAAGATCTATTTGGTTGGACATCTCGCAGTATGCAGAA
AAATTCACAGCCGGTCTGAGTTTTACTAGGCAAAAGTCATTTTTCTGACATGTGGATGTAACAATATCATAAAATGAACC
GTTGACGAAAGTTTTTTACTCGGTTGATTTTTTTGTGTAGCGCACGACAACTAGACGCCACATTACACTGTGCAGTG-CT
GGCTCTTATGCCCTACACGCCTAGTCAACCTACATTGTGTGGTACCACTAGTGCGACACCTACACCGTATAGTGTGGCGC
CTAACTCTCAGACGTTACACATTGACTTGGCATTTTTCAGGTTGATGG--------------------------------
---------------------------------------------------TTTATTTTGTGATATTTTTTCGCGCACGG
AGTCAAATCTGTTGTTTTTTCCGTTTTGCTAGACGTGGCTTGAGACGAAACCCTGACGGAACATAGACTACGTACAAAAC
CACAC-AACACAGAAGGATAACGTCGCCGTCGTCCTCGCCGCCGGCGCCGATGACTTCGCCGTCCGCCCCCGTCCTCCAC
CGCCTAATCCTGCCCATACCCTTCGTACCCTCCTGCCGCGTCTCGCCCCGCACCCCCGCATCCGTCGCGGCGCAGCCGTC
GCCGTCGCCGAGGAGAATATGGCGCCTGCCCCTGCTCCGATCGTCGCTGCCTCCCGAAGGTGCGCGCGCGTCGCCACGCA
CCTACAATATTCCCGGTTTCCTTCCGCACATCTGACGCGCATCCGTCGCCCTAGGATCCCCGGCGGAGCTTGTAGCAGAG
GACTCCAAGTTCGTACCGCTTAACGCCGAGGACCCGATGTACGGACCGCCGGTGAGTCGCCACCAGTTGCGCGTTACAAG
CGAGTGCTATTCCACGCCCCCGCTGCATAT----ACATATAGCTTCTGTTGCCGGTGAAATATAGTGATTTTGTTTACTT
CGAAATGCTGAGATCGATGTCACTGAATTGTGACCCCATTTCAGGCAATATTGCTCATCGGATTCGATAAAAGCGAGGCC
GTCAAGGTATTCGGTTCACAGGATTCTTAGAACCTGCGTGATGCTTGCATGCCGATATTGACAGATAGAACGCTAATTTA
CAAGTAATTCCTGTGAATTTTCGTAACTAGTGCAGATTCAGGAGTTCCTGAAGGAGCTCGACGGTGATTTCCTCAAGGTA
ATTATGTTTCGCGCCTGCTGTAACAGAAGTTTACCGAGAAAAGATCAGGTTTG---GTACATTTAGCTGCAGAAGAACAG
AAAATGAACGAAATAGGAGTCTTCTCCACTGTTAAAAAG-TAGGCGTCTTCTAACGG--AGTAAGTAATAAGATCAAGAA
ATGAGTCTTGAAAAAAGAC-ACTGAAATGTAGAGTAGCCAAAGCTTACTCTTATTCAGAAACAAACGTGTGAGATGAAAA
TACAGTAGAAAGTTTGTCATACGATCTTGAAAGTTCAG-CAAACTTGTTCATGGGTCAGGTGATTCGTTGTACAGAAGAA
ATGACGAAACAAACTTTGTGGGATGCCATGCACACTGAGCAGCCTAATGTAGAAGCTGTCAAGGTAACAACATTCACAAA
CATGACATTTTCAGTCTTTACCGCGCTTACTTACACTCTTATGCTGAAATAACAGCCTTGCCAGATGCCTTCAATCACTT
CTTTCGTAGCCTTAAATTTTACCATCGATCGCTAGTTAACATGTGTGTTTGGTTCACAGATTATGAAATCTCCGCAAAGA
ATATGCATCTTTTCTGGTCTGACTGGTGAGGAGATGATGATGTTCATCAACGCCTACCCAGAAACAGGTACTAGTTCCTT
AGTCCTAGGCCAAAGGAAATTCAGAAACTGTAAGAGAAAAAACAGCGTCTTTCCACACGCACAAACAAAAGACTCTATGA
CGAAATAAATTATA-----------------------------------------------TTGCTCACTGTTCAGGGTT
GGAACAAGCCGCTTTCGCGGCACTTGTTCCCAACAGCGGAGAGAAGGTTCTTGCTGAGGTGATCGAGGAAATAATGGGTG
ACCATGAGATGCTGGTTTGTTGCTTCTGACTGCTGCCAACTTCTGTGTTCTTCTTCTGCCTTCAG---TACCTGCAGACC
GAATGAGTTTTTTGCTTTCTTGCTTCACTACCTGCAGACGGGAAAGAATTCAGCATGAAGGTAGTATGTCTCAGGTAGTG
ACCCGTCCGCAGAGACAAAATCAGGCAGCATTGAACTGATCCTCAAATGGTCTTTTGAAATCACCCGCTCCAAGTGATCC
ACCATGT-AAATGTCAATCCTTCGACTCTCTCCATCTGCTGGTAAATGTTAATC-----------------------TCT
GGAGAAGTTGAGCAGCTTGTACATTTGAAACTGAGATGAACTGAGATGCAAG----------AGATCAATGTACATTTGA
AACTGAGATGAACATTACTGAGACTTTTCTTCTTGACATAACCATGTAATTAAGATCCTTTTTGTTGGAAGCACTTAATT
CTTGGACAGTTCT-CTGTTGTTGGATTAAGGTACAGAATTCCTCAGCATGCTTATCCACACACCACATTTATTCCG-TTT
ACTCCATGAGAAGGATGGTACTCTGCATCCTTTGCTTCAACTGTGACGCTACGGTGAAATGAATAATTCTGCTGTC----
----------------------------AACAATGAACAATACTATTTTCTCTCTTGAAGTAGTACGGATGAGCATCCTG
GCATGTGAGAAGTTTGTTTAATCATCCGTTTAAGACAATTATATTATGAGTTATGCGGTAAG-G-TTTGCTATCTCTTTG
TATATACAAGTCCTACTTGTCGGCAAAGTGATCAGAAAAACAATTAACCAAATGGTAGAGAAGATAAAATAGCAAGCCTT
GTTCTTGTCGCCTCTCTGGCTGTGCCTCTGCACCCCAGGATGGTTGAGGAAAGGGGGTGGATGATG--------------
-------CTATATTCTCAAGTAGCACTCATGATCAAGGGTTGTTTTTCACACACCAATAATCAAAAATTTAAGTTGGGCA
ATATTGTTCTCTATAGCTGCCTAAGATAACACCTGAATCAT---------------------------------------
-----------------------------------------------------------------------------
>chr1B_898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GCTAGACGTGGCTTCAAACGAAACCCTGACGGAACAGAGACCACGTACAAAAC
CACAC-AACACAGAAGGATAACGTCGCCGTCGTCCTCGCCGCCGGCGCCGATGACTTCGCCGTCCGCCCCCATCCTCCAC
CGCCAAATCCTGCCCAGACCCTTCGTACCCTCCTGCCACGTCTCGCCCCGCACCCCCGCATCCGTCGCGGCGCAGCCGTC
GCCGTTGCCGAGGAGAATATGGCGCCTGCCCCTGCTCCGATCGTCGCTGCCTCCCGAAGGTGCGCGCGCGTCGCCACGCA
CCTGCAATATTCCCGGTTTCCTTCCGCACATCTGACGCGCATCCGTCGTCCTAGGATCCCCGGCGGAGCTTGTAGCAGAG
GACTCCAAGTTCGTGCCGCTGAACGCCGAGGACCCGATGTACGGACCGCCGGTGAGTCGCCGCCAGTTGCGCGTTACAAG
CGAGTGCTATTCCACGCCCCCGCTGCATATGGAAACATATAGCTTCTGTTGCCGGTG-AATATAGTGATTTTGTTTACTT
CGAAATGCTGAGATCAATGTCACTTAATTGTGACCCGATTTCAGGCAATATTGCTCATCGGATTCGATAAAAGCGAGACC
GTCAAGGTATTCGGTTCACATGATTCTTAGAACCTGCGTGATGCTTGCATGCCGATATTGACAGATAGAACG-TAATTTA
CAAGTAATTCCTGTGAATTTTCGTAACTAGTGCAGATTCAGGAGTTCCTGAAGGAGCTCGACGGTGATTTCCTCAAGGTA
ATTAAGTTTCGGTCCTTCTGTAATTGAAGTTTACCAAAAATGAAACATGTTTGGTAGTACATTTTACTGCAGAAGAACAG
AGATTGAAC-AAATAGGAGTCTTCTCCACTGTTGAAAAAATAGGCATCTTCTCGAGT--AGTAAGTAATAAGATCAAGAA
ATGAGTCTAGAAAAAACTCCACTGAAATG--GAGTAGCGAAAGCTTACTCTCATT-AGAAACAAACAAGTGAGATGAAAA
TACTGTAGAATGTTTGTCATGTGATCCTGATAGTTCAGCCAAACTTGTTCTTGCGTCAGGTGATTCATTGTACAGAAGAA
ATGACGAAACAAACTTTGTGGGATGCTATGCACACTGAGCAGCCTAATGTAGAAGCTGTTAAGGTAACAACACTTGCAAA
CATGACATTTTCAGTCTTTACTGCGCTTACTTACACTCTTGTGCTGAAATAACAGCCTTGCCAAATGCCTTCAATCGCTT
CTTTCATAGCCTTAAATTT-ACCGTCGATCGCTAGTTAACATGCTTGTTCGGTTCACAGATTTTGAAATCTCCACAAAGA
ATATGCATCTTTTCTGGTCTGACCGGTGAGGAGATGATGATGTTCATCAACGCCTTCCCAGAAACAGGTGCTAGTTCCTT
AGTCCTAGGTCAAAGGAAATTCAGAAACTGTAAGAGAAAAAACAGCGTCTTTCCACACAAACAAACAAAAGACTGTGTGA
CGAAATAAATTCAATTGTGGATGCTTTATCTCAGGCAGTGTGTCATCAAACTGACGAGATGTTGCTCACTGTTCAGGGTT
GGAACAAGCCGCTTTCGCAGCACTTGTTCCCAACAGCGCAGAGAAGGTTATTGCTGAGCTGATCGAGGAAATAATGGGTG
ACCATGAGATGCTGGTTTGTTGCCTCTGACTGCTGCCAACTTATCTGTTTTTCTTCTTCTGACTTTGCTACCTGCAGACG
GACTGAGTTTTTTGATTTCTTGCTTCACTACCTGCAGACGGGAAAGAATTCAGCATGATGGTAGTATGTCTCAGGTAGCG
ATCCGTCCGCAGCGACAAATTCAGGCAGCATTGAACTGATCCCCAAATGGTCTCTTGAAATCACCCGCTCCAACTGATCC
GTCGTGTAAAATGTCAATCCTTCGACTGTCTTCATCTGCTGGTAAATATTAAATATCTGGAGAAGTTGGGCAGCTTGTAC
TAGCTACTTTTTCAAACACAC----------------------AGATGCAAGCCCTGCAACTAAATCAATGTACATTTGA
AACTGAGATGAACATTACTGAGACTT---TTCTTGACGTAACCATGTAATTAAGATCTTTTTT-TTGGAAGCACTTAATT
CTTGGACAGTTCTTCTGGTGTTGGATTAAGGTACAGTATG----------------------------------------
----------------------------------------------------------GTGAATAATTTCTACTGTATAT
AG-------------------------------TGAACAGTACTATTATCTTTCTTGAAGTAGTACGGATGAGCATCCTG
GCATGTGAGAAGTTTGTTTAATCATCTGTGTAAGACAATTATATTATGAGTTATGAGGTAAG-GGTTTGCTTTCGCTTTG
TATATAAAAGTCCTAGTTGGCGGTAAAGTGATCCGAAAATAATGTGACCAAATGGCAGAGAAGATAAAATAGCAAGCCCT
GTTCTTGTCGCCTCTCTGGCTGCACG-------CCGAGGAGGGGTGAGGAAAGGGAATGGACGGTGGGTTCGGGTGTGCA
CATGATGCTATATTCTAAGTA-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>SNPs
--------S----------S-----SS----------S-----SS-------------------------S--S------
--------S-S--------------S--------------------------------------S--------------S
-------------------S----S-S---S-S----S-------------------S--------SS--S------S--
--------S---S---------------------S-----SS-------S-S-----------------S-S----S-S-
------S-------SS------------------S---S-SS------------------S-----------S---S-S-
S-S---------------------S---------S---------S-------------S---S-----SSSSSS----S-
-----S------S-----------S---S------S---S------S--S------S------------S----------
-S--------S-----S-SS---S----S----------S---SS----SS-----S--------------------S--
-----SS-S--------------------SSSS-------S--S-------------S-S-----S-S-------S---S
---S-------S-------------SS-S------------SS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S--------------SS-----
--------S--------S-S------------------------------------------------------------
-----S------S-------------------------------------------------------------------
-----------------------S--------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----S-------------------------------------------------------------------------
----------------S------------------------------S-S------------------------------
-------------------------S--S-----S---------------------------------------------
------------------------------S------------------S--------S---------------------
---------S------------------------S----------------S-------------------------S--
---------------S-------------S-------------S-----------S-SS------S--------------
----------------S---------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-------------------------S--------------------------------------------------S---
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------S------S--------------S---------------------S---------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------S--------S-S-------------------------S-------------S--------S---S-------
----------------------S-----------------------------SS--------------------------
----------------------S--------S-------SS----------S--------S--S--S--------SS---
---------S---------------S---------------S---SS-----S---S-------------S-----SSSS
-SSSSSSSSSSSSSSSSSSSSSSSSSSS---------S---------S-------------------------S------
--------------------------------------------S-----------------S-----------------
---------------------------------S-----S----------------------------------------
-------------------------------------------------------------------S---S--------
------S---------------------------------------S--S-----------------S-----------S
-------------------SS--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_471
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTTGGTTAGACGTCTCGGGC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_1361
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
AGAGTGTTATTCCACGCCCC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_843
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GCGCTACACAAAAGGTCAGC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_1650
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AAAGGAGCTGGACGGTGATT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_1367
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGCGCGTTACAAG
AGAGTGT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_2422
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AGCTTTATCTCAGGCCGTGT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_2381
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ACAGCGTCTTTCCACACACT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_3725
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TCACAAGGCACGCGGATATT-------------
