>input_sequence_45591
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------------------------ATGGAGTCCACGCCGGCGCCTCCTCTCCTGACGCCGCACAAGATGGGCCAGTTCGA
CCTCTCGCACAGGCATTGCAACCAGCCAGCACAGTTTCCCTTCATGCCATCGTAGCTCAAGTTCTTTTTTCTTGTTATTC
TTTTCTTTTTGCGGGTCTTTTTCTTGTTATTCTGATGATAGATCGATCATGCACATGCGTCTGGATTTTTTTCC--TGGG
AATTTCATTGAGCTTCGACGAGGATTACCAAATTGTCTGTGCCTGAAAATTTCAGGCAAAAATCCCTAAATTGATTTTTT
TTTAACTTTTG--ACCAAATCTGCCTGAAATAATATTGATATATCAGCAAACAAGAAAAATTCGTCAATCTTGATGCGGA
CATGGTTTGG-TGCACCCGGCCAAAAGTCGTGCAGCCTTGTTCATCCATACTGCGTTTGTGCAGGGTTGTGCTGGCGCCA
CTGACGAGGCAGCGGTCCTACGGCAACGTGCCGCAGCCGCACGCGGGGGTGTACTATGCGCAACGGGCGACCAAGGGTGG
GCTGCTCATCGCGGAGGCGACGGGTGTGTCAGACACGGCACAGGGGTACAAGGACGCCCCTGGCGTGTGGACGGAGGAGC
AGATCGACGCGTGGAAACCCGTGGTCGATGCCGTGCATGCCAAGGGTGCGCTCTTCTTCTGCCAGATATGGCACGCCGGA
CGCGTCTCAAACTACAGTAATGGCTCTCCTACGTTCTCCTGATTTTTCAAGTATGTTTGGTTGTAGTAGTACGTTTGATT
TTTTGTGTTGATTGTTCGAAAATA--T--AGAGTTACAGCCGAATGGGCAGGCGCCGATATCGAGCACCGACAAGCAAGT
GAGTCCTCAGATGAGCGCTGACGGTCGTCTCGAGGAGTTCTCACCTCCGAGGAGGCTTACAAAGGACGAGATACCCAATG
TCGTCGATGACTTCAGAAAAGCCGCAAGGAACGCCATCACAGCTGGTACGTGTTACTCACCGATACTACTTCACTTTGTG
GGCCATTCATGTACTACTACTTACTAG-----------------------------------------------------
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---------------------------AGTTC---GATCATACTCTGTCCAAGCAACCTTTGGTTGATCTATGTGCATGC
ATGTAGGGTTTGACGGGCGTTGAGATCCACGGCGCCTACAGCTACATCATCGATCAGTTTCTCAAGGACAGCGCCAACGA
CCGCACCGACGAGTACGGTGGCAGCCGCGAGAACCGATGTCGCTTTGCGCTAGAGGTGGTGGACGCAGTCGTCGGGGAGG
TGGGCGGCCACCGCGTGGGCATCCGTTTGTCTCCCTTCACCGACTACATGGACTGCCATGACTCGGACCCTCAGGCTCTC
GCCCTCCACCTCGTCAACAAGCTCAATGACTATGGCATCCTCTATTGCCACATGATTGAGCCAAGGATGGCGCACGTCGA
TGGCCGACGCCAAGTCCCGCACCGCCTTCTGCCCTTTAGGGAGGCCTTCAATGGCACCTTCATCGCCAACGGAGGGTATG
ACCGGGAGGAGGGGAACAAGGTGGTCGGTGAGGGATACACTGACCTCGTCGCTTATGGGCGGCCGTTCCTAGCAAACCCA
GACCTACCAAGGAGGTTCGAGCTCAATGCGCCGCTCAATGACTATGACAGGATGGCATTCTATACCTCTGACCCTGTCAT
GGGCTACACCGATTATCCATTCCTCGACTAA-------------------------------------------------
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>chr1A_1_TraesCS1A01G217700
GAACGAGGCTCTTAACAAGCGACTTGGGACTGAGGTTGTTATAATCAACTACCCTGCAATACATTTCACTTCATATTGGA
ACAGAGGACTGAGAAATTGACAGCAAGTA---TATGACGATGATGTGCTTCATCCCGTCCGTGTAGCAACTTGACCTGCA
TGGCATCATCAGCGAGACGGAGCGGCGGGGCATGTCTTTCAACCAGCTGCTGACCATACCGGAGCAGGACGAGTGGGTGT
ACAGCGACGGCAAGTCGACGACCTGCGTCGCCTTCATCCTCGCCATGTACAAGGCGGCCGGGGTGTTCGCTCCCTTCACA
GAGTCCATCCAGGTCACGGAGTTCACCGTGAGTGCCG-----GCCGCTTCAGTCAAGCTGCATGCCCTTTTTATCTGCTC
CTGACCTCGGCTGATCAAGTGCTTTGCTTCTTCTTCTTCCCCTAGATCCGGGACGCGTACACGCTGAGGATCTTCGAGGA
CAACCGGACGAGGCTGCCGGGGTGGTGCAACGGCGACGCGGACGGGCTGCCCTTCTGCCAGATCCTCGGGGAGTACAAGA
TGGAGCTCCCGGAGTACAACACCATCCAGCCGTACGCCAACATGAACGAGAACTGCCCCTCCTCGCCGCCCACCTACAGC
AGGCCGCTGCGATGTTGATCATCGATC----ATTTCTCCATCCCAAAGAAAGATGCTCGTCCATCATCT-----------
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TGCACCGAGGATTATTATACG-----------------------------------------------------------
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-----------------------------------------------------AGGGACGAGAGAAAGTGCGCTTAGCAG
CCGTCCGGGGCCCAGGCGCAGAAAGGAGCTTTCACCTAGCTTAATTAACTTGTCTAAAAAAACTATCTTAATTAACACCC
GGCCGGGTCCCTCCATGCACCATCGCATCGTATTCTTATCTTA--ATATATGTACCTCGTATGATCGCATCCGCTCTATA
AAAT-GAGTACCTCCACAGCACTCACTCACTCACTCGGAGCCAACCTACCAAACACACATCACTCACTCGGC-------C
ACAGGAACCAACATCCATCGATCCATGGAGTCCACGCCGGCGCCTCCTCTCCTGACGCCGCACAAGATGGGCCAGTTCGA
CCTCTCGCACAGGCATTGCAACCAGCCAGCACAGTTTCCCTTCATGCCATCGTAGCTCAAGTTCTTTTTTCTTGTTATTC
TTTTCTTTTTGCGGGTCTTTTTCTTGTTATTCTGATGATAGATCGATCATGCACATGCGTCTGGATTTTTTTCC--TGGG
AATTTCATTGAGCTTCGACGAGGATTACCAAATTGTCTGTGCCTGAAAATTTCAGGCAAAAATCCCTAAATTGATTTTTT
TTTAACTTTTG--ACCAAATCTGCCTGAAATAATATTGATATATCAGCAAACAAGAAAAATTCGTCAATCTTGATGCGGA
CATGGTTTGG-TGCACCCGGCCAAAAGTCGTGCAGCCTTGTTCATCCATACTGCGTTTGTGCAGGGTTGTGCTGGCGCCA
CTGACGAGGCAGCGGTCCTACGGCAACGTGCCGCAGCCGCACGCGGGGGTGTACTATGCGCAACGGGCGACCAAGGGTGG
GCTGCTCATCGCGGAGGCGACGGGTGTGTCAGACACGGCACAGGGGTACAAGGACGCCCCTGGCGTGTGGACGGAGGAGC
AGATCGACGCGTGGAAACCCGTGGTCGATGCCGTGCATGCCAAGGGTGCGCTCTTCTTCTGCCAGATATGGCACGCCGGA
CGCGTCTCAAACTACAGTAATGGCTCTCCTACGTTCTCCTGATTTTTCAAGTATGTTTGGTTGTAGTAGTACGTTTGATT
TTTTGTGTTGATTGTTCGAAAATA--T--AGAGTTACAGCCGAATGGGCAGGCGCCGATATCGAGCACCGACAAGCAAGT
GAGTCCTCAGATGAGCGCTGACGGTCGTCTCGAGGAGTTCTCACCTCCGAGGAGGCTTACAAAGGACGAGATACCCAATG
TCGTCGATGACTTCAGAAAAGCCGCAAGGAACGCCATCACAGCTGGTACGTGTTACTCACCGATACTACTTCACTTTGTG
GGCCATTCATGTACTACTACTTACTAG-----------------------------------------------------
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---------------------------AGTTC---GATCATACTCTGTCCAAGCAACCTTTGGTTGATCTATGTGCATGC
ATGTAGGGTTTGACGGGCGTTGAGATCCACGGCGCCTACAGCTACATCATCGATCAGTTTCTCAAGGACAGCGCCAACGA
CCGCACCGACGAGTACGGTGGCAGCCGCGAGAACCGATGTCGCTTTGCGCTAGAGGTGGTGGACGCAGTCGTCGGGGAGG
TGGGCGGCCACCGCGTGGGCATCCGTTTGTCTCCCTTCACCGACTACATGGACTGCCATGACTCGGACCCTCAGGCTCTC
GCCCTCCACCTCGTCAACAAGCTCAATGACTATGGCATCCTCTATTGCCACATGATTGAGCCAAGGATGGCGCACGTCGA
TGGCCGACGCCAAGTCCCGCACCGCCTTCTGCCCTTTAGGGAGGCCTTCAATGGCACCTTCATCGCCAACGGAGGGTATG
ACCGGGAGGAGGGGAACAAGGTGGTCGGTGAGGGATACACTGACCTCGTCGCTTATGGGCGGCCGTTCCTAGCAAACCCA
GACCTACCAAGGAGGTTCGAGCTCAATGCGCCGCTCAATGACTATGACAGGATGGCATTCTATACCTCTGACCCTGTCAT
GGGCTACACCGATTATCCATTCCTCGACTAATAACTCAGCTTCCTGCAAAGCTCGAACGATCGAAGAAACAAAA--AGG-
-AAGATCGATATCGATTATCTACTGTAGTTTTTCCAAAATTTGGTTGTGCCAAAATAAAAATAAAATGACACATCTAAGA
TGCTCAATTACCATCTTATTTCAATAAAAGAGTGACAAGAGAATTAAGACTTTATTTACATGCGCGTAATTCATTTCGCC
GAGAAGGGGGCTCATAGAAGTGACACATGATGCATGAGTTGAAACTTGTTTACACACCGGAGAGACAAGGTCTCCAGCCT
CGCTAAGCTAACGTCCTTGTGGAGTTGGAGAGATTTTTAAAAGTAAGACCAATCATTGTTTTCTCAAGAGTGACGACAGT
CATTTGTATTGTTTCATGACGAAACTACTTACCTAACTGCTAAATGTGACGTGAGCATCTAACTGGAACTGTGTTCTGCT
ATAGTGACAGTTGATTACTTCTATAGTGCCAATATTAGGTAGCACCCACTTTTTATTTAAAAATGAGCTGGCTGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCAATATTCAACGAAAACTTTATGGAAACCATATTTTAAAGTTCTGAAAAAATCTGTACAAAATA
CGGGATATTAAAAGGGTGATGTTTTATTGCCACACATAGGTAATCATCCTCTTAACATCCCGTATTTTTTTCAATTTTTT
TCGAAACTTTAATCATCCTTTTCTTGTGGTTTTCAATGGTTTTCACCGAATGTTGGCTTCCGCATGACATTCTCCCGAGG
ATGGTACACTAGCACGAAAAATAATAATAAATGTTTTTAAAAAGTTCTGTTTTTTTTATGAATGTTCGTGTTAGT
>chr1B_1
GAACGAGGCTCTTAATAAGCGACTTGGGACCGAGGTTGTTATAACTA--TATCTTGCAATAAACTTCACTTCATATTGGA
ACCGAGGACTGAGAAATTGACAGCAAGTA---TATGATGATGATGTTCTTCATCCCGTCCGTGTAGCAACTTGACCTCCA
TGGCATCATCAGCGAGACGGAGCGACGGGGCATGTCTTTCAACCAGCTGCTGACCATACCGGAGCAGGACGAGTGGGAGT
ACAGCGACGGCAAGTCAACGACCTGCGTCGCCTTCATCCTGGCAATGTTCAAGGCGGCCGGGGTGTTCGCTCCCTTCACG
GAGTCCATCCAGGTCACGGAGTTCACCGTGAGTGCCGTGCCGGCCGCTTCAGTCAAGCTGCTTGCCCTTTGTT--TGCTC
CTGATCTCGGCTGATCAAGTGCTTTACTTCTTCCCTTA----TAGATCCGGGACGCGTACATGCTGAGGATCTTCGAGGA
CAACCGGACGAGGCTGCCGGGGTGGTGCAACGGCGACGCGGACGGGCTCCCCTTCTGCCAGATCCTCGGGGAGTACAAGA
TGGAGCTCCCGGAGTACAACACCATCCAGCCGTACGCCAACATGAACGAGAACTGCCCCTCCTCGCCGCCCGCCTACGAC
AGGCCGCTGCGCTGTTGATCATGGATCGATCATTCTTCCGTCGAAAGGAAAGATGATTTTACATTATTGTGCCCTGTGCA
ATCAAATAGGACGTACGCTTTACTCCG--------------CATCGTACGCTCTCATCGAGCAACATGTAAAGAAGTACT
AGTACTGTAATATGTTACACACCTGCCCTAATTGTGATGGTTTTCTTTATAATTTTTAACCCGGATGG----TAGTTATA
TGATGACCTAACCCAAAATGTGATGTTTTGTTTTTAATTTTCTCCGCCCGGACTTGGGCGCTGCTGATAGCCAGAGGCAC
GCAAAGCAGCCACCTCCATTCGTCTCCTTCCCCATGAATCCGGCTCTCCTGCGTGGGTAGGTGCGTCATCGGCGTCATCT
TGCACTAAGGATCTCTACTCTTAATGTCTCAGTTGGTAGGTCGCATTCCGGGTTTTATTTTCGTCCCACCTCATCCGGTC
TTTTTTGATACTTCTTTGATACTTCCTCCCACCTCCCACGCGTTTTATTTCGCTGGTTTTTTTTTCGTCCCTCCCCCACC
TCACCGGTTTAGTTTCGCGTCACCCTCTCACACGAAAAAAATCTTAACGGATCATAACTTTCCATGCTGGTGCAAATTAT
TTTTAGTAATGTCTTTATGTGAAAGAATCAATCACGATCAATCTTTAAATATCAAATCTAAATTAATTAACCTTACCTTA
AATTGCTCAATCACATTAATTAGAAAACAAAATAATCGATTTTAAGAAAATATCTATTCTTAATGGAGGGTATTACATAC
CAAACATAGGTACGTCATTAGCTCGCTTCCTTCCCTTCTCTTCCCTTCGTCCCTCAGTCCCATGCTCGTGGCGCTGAAGT
GGCATCGACAGGCGATGGCGGCGAGGACAGCACGTGGCAGCCCCTGAAGCACGAACACGACTGCACCTCGGCTCTGCCGT
CTCCCAAGATATGGGTGAGTTCTCGTGATGCCCACCCTAAACCCTCACGTCCTACAAATTCCTCAACCTCTACCATCTCG
ATTTCGTCCCTGCTCTGATCCAAATGACGATGCAGATCCGGCCGATTGACAATGGAGGTTTGCCATCCTTCCTCTCAGCA
CCCACTCCTGGAGGAACGACACGCCATGCCGATCGAACCCGGTCGAGATCACTCACCAAGATTGCTATTCGGAAGTTTTT
TATCAAAAAGTGAAGAGTGGGACAGGATCTGCACTTTTGTTAATATCTCTACTCCTAATGTCTCAGTTGGTAGGTCGCGT
TTCGGGTTTTATTTTCGTCCCACCTCACCCGGTCTTTTTTGGTACTTCTTTGGTACTTGCTCCCACCTCCCGCTCAGCTG
AGACGGTTTATTTTCGTACTCCCTCCCACCTCCCAGGTAGTTCCCTCCACGCAAAAAAAATCGAACCAACCAATCTCTAC
TCCTAATGGAGCAGTTGATAGTCTTCGCCGGTCAATTTTCGTCCCACCACTTTCGTCCGGGTTTTTTTCGTAGGTTAACT
GTCGTAGATTTTTTTCGTCGCCTCCCCCACTTCATCGGTTTATTTTCACTTCACCCTCTCACACAACGAAAAAAAACTGA
ACGGATCAGAACTTTCCATACTGACGCAAATTATTTAGTAATGTCTCTATGTAAAAGAATCAATCACAATGAATCTCTAA
AGATCAAATCTAAATTAATTAATCTTCGTAACGTTTGTTTCCTTTCGAATCACGTCCATAACTTTCCTTCTTTATTTGGG
CAAAAACTGTTTGGTAGCAGAGATTAGGAAGCTTCCTATGAGTGTAGTAATAGGAAGTATTCTTTTTCTTGATGATTCGT
TTCCATGCATGACGATAGTAAATTACGCCAACATTCACCACTATTTATCAATGTCATCAATCGTATCCATTTCTACCAGT
TTTAAGGGAATCTGCTCGCTATGTCTTTTTTAAGGGGATCCGCTCGCTAAGTCGTCGTCGCATGTTATTTTCACAAACAA
TCTCTACTCCTAATGGAGCAGTTGGTAGCCTCGTACGGTTTATTTTTGTCTTCCTCCCACCTCCCCTGGTTTTTTTTCAT
CCTCTCTCCCACCTCCCAATTTTGTTGGTTTTTTTCGTCGGTTTTTACTCGCTCCCTCCCACCTCCCAATTTCGTCCGGT
TTTTATTCGTCCCACCTCCCACCACCCCCTCGTACTGGTTCTTTTTCTCTCCACTCTTTCCTTGCAAACCAATAATTTCC
TAACATACAAAAGATCACGAATCTATCTTTCCTTACCCGAACCAATCGCGCCCTACATCAGTGCATTTCTTTATTAAGAA
AACTAACACGTAAATCTTAACGCATTGCAAATAAATCCCGTTATGAACCTAATTAATTTATTATGGAATCTATACGTGGT
CGCATTGGTTCTTTTTCTCTCCACTCTTTCCTTGCAAACCACTAATTTCCTAACCTACAAAATATCACGAATCTATCTTT
CCTTATCCGAATCAATCGATCCCTACATCAGTGCATTTCTTTATTAAGAAAACTAACACGTAAATCTTAACGCATTATAA
AGAAATCCCGTTATGGACCTAATTAATTTATTATGGAATCTGTACGTGGTCGCATCTTTCCCCTCGTGAAAAAATCGCAT
CCATCTCCCGTTAAAAAGGAAAAGAGAACATGAACGATCAATCCCACACCCTGCATCTCAGTAGCAAAAAATCGCCCCCG
CCTCTGCTACTGCGCCTCGCCGTGTGCCTGGCTCGACCCATCCCTCGCCTGCATGGCTGGATGCCGCCGTCTCCACCGCC
ACGTACAAGAAAACGGTGGGCAGAACCATCCATTCAAATCGCACACCCCCACCCTCCTCCGCAATCCCTAGCCCCGCATC
ACCCTATCGCTTTCTCGCATCTCTTTCCCCTCGATGTAGATGGTGCCGAGCGGCGGCCTCGAGCACCGGCAGTGCCGCCC
TCTCTATCTTCGCTGCGTCGAGAGATGGGCCGAGGCTATCGTCGGTTCGCCGCCCACGATTGGGCCGCCTCCGGTTGTCG
CGCATCACCGGCTCCACCTAACGTGCCCGACCCTCTCCGCTTTCGACCTTCCGGTGACCACATCCCTCCGCGCCTCCATC
CATCATCCACAAAGGCCACTCCCTGCACCCACCCTCCTAAATTCTCCATACCGGCGGACAATCACCGAAGATCCAAGTTG
GCCCGATATCAATTTTCTTACATGCTTTCTTTATCAGTTGGTGATGGGAATGGGTTCCAATTTCTCTCTCTGACTGTGGA
TTCGCAGGCAAGAAGCGCTTCTACATGCATCCTCCCGTCGGTCCCTAAAGTACCAAGGTAAATGGTTGATATTGCGTTTG
TCTAGGATGATATATGTTGGCTCTGTTCCGGTTCATCCGAGCAGTTTGGTGACTAATTTACTGATAATTTAATTATATTA
ATTAAATGAGTCGGGTGTATCGTCGTGCATTTATCTTGCCAGTAATGTTCTGTGATGCTCTGATGCACTTTGGGAATTGA
TTATCTTGTCTTCAGTGCAGAACATTTGTTTATTAATGCATGAGAAGAATCCTTGTTACTACCTTGAACCTGTTTTATAA
TCCATATTGTTATGCACTAGCGCGTGTGCGTGTGAAATAGATGGATTATGGTCCCGTACCCAATAAGATGGATATGTGTG
TGTGTTAGAGAGAGAGAGAGAGAGGGAGAGGGGGAGAGAGAGTGAGGAGGAGGGAGGGAGAGAGTGTGTGTGAGAATTTG
ATGGTAAAAAGGTCGTCAATGTCACTTGATATGTATGAGAATATTAAATGTAATATTAACATAATTGATATTGAACTCTT
AAAATTAATGTGGCTCCGTTGCAACGCATGTGTGTTCTTCTAGTTTATATATAAGGGACGAGACAAAGTGCGCTTAGCAG
CCGTCCGGGGCCCAGGCGCAGAAAGGAGCTTTCACCTAGCTTAATTAACG---------------------------CCC
GGCCGGGTCCCTCCATGCACCATCGCATCGTATTCTTATCTTAATATATATGTACCTCGTATGATCGCATCCGCTCTATA
AAAT-GAGTACCTCCACAGCACTCCATCACTCACTCGAAACCAACCTGCCAATCACACATCATTCACTCGGCCACAGCCC
ACAGGAACCAATATCCATCAATCCATGGAGTCCACGCCGGCGCCTCCTCTCCTGACGCCGCACAAGATGGGCCAGTTCGA
CCTCTCGCACAGGCATTGCAACCAGCCAGCACAGTTTCCATTCATGCCATCGTAGCTCAATTTCTTTTT-CTTGTTCTTC
A--TTTTTTTGCGGGTCTTTTTCTTGTTATTCTGATGATAGATCGATCATGCACATGCGTCTGGATTTTTTCCCCCTGAA
AATTTCATTGAGCTTCGACGAGGATTACCAAATTGTATGTGTCTGCAAATTTCATGCAAAATTTCCTAAATTGATTTTTA
AATT--TTTTG--ACCAAATCTGCTTGAAATAATATTGATATATCAGCAAAAAAGAAAAATCCGTCAATCTTGATGGGGA
CATGGTTTGGATGCACCCGGCTGAAAGTCGTGCAACCTTGTTCATCCATACCGTGTTGGTGCAGGGTTGTGCTGGCACCA
CTGACGAGGCAACGGTCCTACGGCAACGTGCCACAGCCACACGCAAGGGTGTACTACGCGCAGCGGGCAACCAAGGGCGG
GCTGCTCATCGCGGAGGCGACCGGAGTGTCGGACACGGCGCAGGGGTACAAGGACGCCCCTGGCGTATGGACGGAGGAGC
AGGTCGACGCGTGGAAACCCGTGGTCGACGCCGTGCACGCCAAGGGTGCACTCTTCTTCTGCCAGATATGGCACGCCGGA
CGCGTCTCAAACTATAGTAATGACTCTACTATCTCCTCCTGATTTTTCAAGTATGTTTGGTTGTAATAGTATGTTTGATT
TTTTTTGTTGATTGTTCGAAAATA--TGTAGAGTTACAACCAAATGGGCAGGCGCCGATATCGAGCACCGACAAGCAGGT
TAGTCCTCAGATGAGCGCCGATGGTCGTCTCGAGGAGTTCGCGCCGCCGAGGAGTCTCGCAAAGGACGAGATACCCAATG
TGGTCGATGACTTCAGAAAAGCTGCAAGGAACGCCATCGCAGCTGGTACCTATTACTTACCAATACTACTTCACTTTGTT
GGTTATTCATGTACTACTACTTACTAG-----------------------------------------------------
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---------------------------AGTTCATCAATCATACTATGTCCAAGCAACCCTAGGCTGATCTGTGTGCATGC
ATGTAGGGTTCGACGG-TGTTGAGATCCACGGCGCCTATAGCTACATCATTGATCAGTTCCTCAAGGACAGCGCGAACGA
CCGCACCGACGAGTACGGTGGCAGCCTCGACAACCGATGCCGCTTCGCGCTAGAGGTGGTGGACGCCGTCGTCGGGGAGG
TGGGCGGCCACCGCGTGGGCATCCGTCTGTCTCCCTTCACCGACTACATGGACTGCCATGACTCGGACCCTCAGGCTCTC
GCCCTCCACCTCGTCAACAAGCTCAATGACTATGGCATCCTCTACTGCCACATGATCGAGCCAAGGATGGCGCATGTCGA
TGGCCGACGCTAGGTCCCGCATTGTCTGTTGCCCTTCAGGGAGGCCTTCAATGGCACCTTCATCGCCAACGGAGGGTACG
ACCGGGAGGAGGGGAACAAGGTGGTCCGCGAGGGGTACACTGACCTGGTTGCTTATGGGCAGTTGTTCCTGGCAAACCCA
GACCTACCACGGAGGTTTGAGCTCAGTGCGCCGCTTAATGACTATGACAGGATGACATTCTATACCTCTGACCCTGTCGG
GGGCTACACCGATTATCCATTCCTCGACTAATAAATCAGCTTCATGCAAAGATCGGATGATCGAAGAAACAAAA--AAAG
AAAGATCGACATCGATTATCCATTGTAGTTTTTCTGAAATTTGGTTGTGCCATAAATAAAATAAAATGACACATCTATGA
TGCTCAGTTGCCATCTTGTTTCAATAAAAGAGTGACAAGAGAATTAAGACTTTATTTACATATGCGTAATTCATTTCGCT
GAGAAGGGTGCTCATAGAAGTGACACATAATGCATGAGGTAAAACTTGTTTACACACGGGACAGACAAGGTCTCCGGCCT
C-----GCTAACGTCCTTGTGGAGTTGAAGAGATTTCTAAAAGCAAGACCAATCACTATTTTCTCAAGAGTGACTACAAT
CATTTGTACTGTTGCATGACGAAACGATTACCTAAA-TGCTAAATGTGATGTGAGCATCTATCTGGAACTGTGTT-----
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>chr1D_1
GAACGAGGCTCTTAATAAGCGACTTGGGACTGAGGTTGTTATAACCAACTGCCCTGCAATAAATTTCACTTCATATTGGA
ACAGAGGACTGAGAAATTGACAGTAAGTACTATATGATGATGATGTGCTCAATTCCGTTCGTGTAGCAACTTGACTTGCA
TGGCATCATCAGCGAGACGGAGCGACGGGGCATGTCTTTCAACCAGCTGCTGACCATACCGGAGCAGGACGAGTGGGAGT
ACAGCGACGGCAAGTCGACGACCTGCGTCGCCTTCATCCTCGCGATGTACAAGGCGGCTGGGGTGTTCGCTCCCTTCACG
GAGTCCATCCAGGTCACGGAGTTCACCGTGAGTGCCGTGCCGGCCGCTTCAGTCAAGCTGCCTGCCATTTTATCTG----
-----CTCGGCTGATCAAGTGCTTTGCCTCTTCC---TCCCCTAGATCCGGGACGCGTACATGCTGAGGATCTTCGAGGA
CAACCGGACGAGGCTGCCGGGGTGGTGCAACGGCGACGCGGACGGGCTGCCCTTCTGCCAGATCCTCGGGGAGTACAAGA
TGGAGCTCCCGGAGTACAACACCATCCAGCCCTACGCCAACATGAACGAGAACTGCCCCTCCTCGCCGCCCACCTACGAC
AGGCCGCTGCGCTGTTGATCATGGATCCATCATTCTTCCGTCGAAAGGAAAGATGATTTTACAGTATTGTGCCCTGTGCA
ATCAATTAGGACGTAAATAGACCACGTACGCTTTTACTCCACATCGTACGCTCTCATCCAGCAACATGTAAAGAAGTACT
A---CTGTAATATGTTATACACCTGCCCTAATTGTGATGGTTTTCTTTATAATCTTTAACACGGATGGATGGTAGTTATA
TGATGACCTAACCCAAAATGTGATGTTTTGTTTGTAATTTTCTCCGCCCGGACTTGGGCGCTGCTGGTAGCCAGAGGCAC
GCAAAGCAGCCACCTCCATTCGTCTCCTTCCCCGTGAATCCGGCTCTCCTGCGTGGGTAGGTGCGTCATCGGCGTCATCT
TGCACTGAGGATTTATG---------------------------------------------------------------
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---------------------------------------------------TAAGGGACGAGACAAAGTGCGCTTAGCAG
CCGTCCGGGGCCCAGGCGCAGAAAGGAGCTTTCACCTAGCTTAATTAAC---------------------------ACCC
GGCCGGGTCCCTCCATGCACCATCGCATCGTATTCTTATCTTA--ATATATGTACCTCGTATGATCGCATCCGCTCTATA
AAAACGAGTACCTCCACAGCACCCCCTCACTCACTCGAAACCAACCTGCCAATCACACATCACTCACTCGGCCACAG---
----GAACCAGCATCCATCGATCCATGGAGTCCACGCCGGCGCCCCCTCTCCTCACGCCGCACAAGATGGGCCAGTTCGA
CCTCTCGCACAGGCATTGCAAACGACCAGCACAATTTCCATTCATGCCATCGTAGCTCAAGTTCTTTTT-CTTGTTATTC
TTTTTTTTTTGCGGGTCTTTTTCTTGTTATTCTGATGATAGGTCGATCATGCACATGCGTCTGGTTTTTTTTCC--TGAA
AATTTCATTGAGCTTCGACGAGGATTACCAAATTGTCTGTGTCTGCAAATTTCAGGCCAAATTTCCTAAATTGACTTTTT
TTTATTTTGTTTTACCAAATCTGCCTGAAATAATATTGATATGTCAGCAAAAAAG-AAGATTCGTCAACCGTGATAGGGA
CATGGTTTGG-TGCACCCGGCCGAAAGTCGTGCAGCCTTGTTCATCCATGCCGCGTTCGTGCAGGGTTGTGCTGGCGCCA
CTGACGAGGCAACGGTCCTACGGCAACGTGCCGCAGCCGCACGCGGGGGTGTACTATGCGCAACGGGCGACCAAGGGTGG
GCTACTCATTGCGGAGGCGACGGGAGTGTCAGACACGGCACAGGGGTACAAGGACGCCCCTGGCGTGTGGACGAAGGAGC
AGATCGACGCGTGGAAACCCGTGGTCGACGCCGTGCACGCCAAGGGCGCGCTCTTCTTCTGCCAGATATGGCATGCCGGA
CGCGTCTCAAATTACAGTAATGACTCTGCCACCTCC-----------------TGTTTGGTTCTAGTAGTACGTTCGATT
TTTTGTGTTGATTGTTCGAAAATATGT--AGAGTTACAGCCCAATGGGCAGGCGCCGATATCGAGCACCGACAAGCAGGT
GAGTCCTCAGATGAGCGCTGACGGCCGTCTCGAGGAGTTCTCGCCGCCGAGGAGGCTCGCAAAGGACGAGATACCCAATG
TCGTCGATGACTTCAGAGAAGCCGCAAGGAACGCCATCGCAGCTGGTAGGTGTTACTCACCGATACTACTTTACTTTATC
GGCCACTCATGTACTACTACTTACTCCATCCGTTTCTAAATATTTGTTTTTTAGATTTCAAATGGACTACCACATACGGA
TGTATATAGACATATTTTAAAGTGTAGATTCATTCATTTTGCTTCGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACA
AATATTTAGGAACGGATGGAGTACTAAAGTTCATCGATCATACTCTGTCAAAGCAACCATTGA-TGATATGTGTGCATGA
ATGTAGGGTTCGACGG-TGTTGAGATCCACGGCGCCTACAGCTACATCATCGAGCAGTTCCTCAAGGATAGCGCCAATGA
CCGTACCGACGAGTACGGCGGCAGCCTCGAGAATCGATGCCGCTTCGCACTAGAGGTGGTGGACGCCGTCGTCAGGGAGG
TGGGCGGCCATTGCGTGGGCATCCGTCTATCTCCCTTCACTGACTACATGGATTGCCATGACTCGGACCCTCAGGCTCTC
GCCCTCCACCTTGTCAAGAAGCTCAATGACTATGGCATCCTCTACTGCCACATGATTGAGCCAAGGATGGCGCACGGCGA
TGGCCGGCGCCAGGTCCCGCACCGCCTGCTACCCTTCAAGGAGGCCTTCAACGGCACCTTCATCGCCAACGGGGGGTACG
ACCGGGAGGAAGGGAACAAGGTGGTCGGCGAGGGGTACACTGACCTCGTCGCTTATGGGCGGCTGTTCCTGGCAAACCCA
GACCTACCAAGGAGGTTCGAGCTCAGTGCGCCGCTCAATGACTATGACAGGATGACATTCTATACCTCTGACCCTGTCGT
GGGCTACACCGATTATCCATTCCTCGACAAATAAATCAGCTTCCTGCAAAGCTCGAATGATCGAAGAAACAAAAGAAAAA
AAAGATCGACATCAATTATCTACTGTAGTTTTTCTGAAATTTGGTTGTGCCAAAAATAAAATAAAATGACTAATCTATGA
TGCTCGATTACCATCTTATTTCAATAAAAGAGTGACAAGAGAATTAAGACTTCATTTGTATGCGCGTATTTCATTTCGCT
GAGAAGGGTGCTCATAGAAGTGGCACATAATCCATGAGTTAAAACTTGT-------------------------------
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>chr1B_2089
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----AGGTTTTGACGG-CGTGGAGATCCATGGTGCAAACGGGTACATCATTGAGCAGTTTCTCAAGGATAGTGCGAATGA
CCGCACCGACGAGTATGGTGGCAGTCTCGAGAACCGGTGTCGCTTCGCTCTTGAGGTGGTCGATGCCGTTGTGAAGGAGG
TCGGTGGCCACCGTGTGGGCATCCGCCTCTCCCCTTTCACCGACTACATGGACTGCCATGACTCTGACCCCCACTCCCTT
GCACTCTACATGTCCACAAAGCTCAATGACCATGGCATCCTCTACATCCACATGATCGAGCCGAGGATGGCCATCGTGGA
TGGGCGGCGAGTGGTGCCGAAGCGGTTGCTGCCATACAGAGAGGCGTTCAAGGGAAGTTTTATCGCTAATGGTGGATACG
ACCGTGAGGAAGGGGGCAAGGTGGTCACTGAGGGGTACACGGACCTCGTGGCCTTTGGGCGGCTATTCCTGGCGAACCCA
GACCTGCCAAAGCGGTTTGAGGTAGGCGCAGAGCTAAACAAGTATGATAGGATGACCTTCTACACCTCCGACCCCGTCGT
CGGCTACACCGACTACCCATTCCTAGAATAAT------------------------------------------------
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>chr1B_2089
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----AGGTTTTGATGG-CGTGGAGATCCATGGTGCAAACGGGTACATCATTGAGCAGTTTCTCAAGGATAGTGCCAATGA
CCGCACCGACGAGTATGGTGGCAGTCTCGAGAACCGGTGTCGCTTCGCTCTTGAGGTCGTCGATGCTGTTGTGAAGGAGG
TCGGTGGCCACCGTGTGGGCATCCGCCTCTCCCCTTTCACCGACTACATGGACTGCCATGACTCTGACCCCCACTCCCTT
GCACTCTACATGTCCACAAAGCTCAATGGCCATGGCATCCTCTACATCCACATGATTGAGCCGAGGATGGCCATCGTGGA
TGGGCGGCGAGTGGTGCCGAAGCGGTTGCTGCCATACAGAGAGGCGTTCAAGGGTACTTTTATCGCTAATGGTGGATACG
ACCGTGAGGAAGGCGGCAAGGTGATCACCGAGGGGTACACGGACCTGGTGGCCTTTGGGCGGCTATTCCTGGCGAACCCG
GACCTGCCAAAGAGGTTTGAGGTAGGCGCAGAGCTAAACAAGTATGATAGGATGACCTTCTACACCTCCGACCCCATCGT
CGGCTACACCGACTACCCATTCCTAGAATAAT------------------------------------------------
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---------------------------------------------------------------------------
>SNPs
---------------S----------------------------S----------------S------------------
-------------------------------------S------------------------------------------
------------------------S----------------------------------------------------S--
-------------------------------------------S-----------------------------------S
-------------------------------------------------------------S----------SSS-----
----S----------------------------SSS-------------------------S------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------SS-
-----------S----------S-----------SS---S--SS--S--------S-SS-S---S--SS-----------
--------------------------------------------------------------------------------
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-----S-------SS--SS-S-----------------------------------------------------------
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---------------------------------------------------------------S----------------
-------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS----
--------------------------------------------------------------------------------
------------------------S------------S-S-------S----S---------------------------
--------------------------------------------------------------------------------
---------------------------------------S-----------------------------S----------
----S-------------------------------------------------------------------------SS
-----------------------------------------S---S---------------S-S----------------
----SS---------------------------------------------S------------------------S---
----------------------S----------------------------S-----S----------------------
-----------S--------------------------------------------------------------------
------------------------S-------------------------------------------------------
----------------------------S--------S------------------------------------------
----------------------S----S----S-S---------------------------------------------
-----------------------------------------S-----------------------------------S--
------------------------------------------S--S-----------SS---------------------
--------------------------------------S----------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S----S------S---------
----------------S---------------------------------------------------------------
--------------------------S------------------S--------------------S-------------
--------------------------S-----------------------------------------------------
--------------------------------------------S-----------------------------------
------------S--------------S--------S-----------------------------------------S-
----------------------------------S----------------------------S------S---------
-------------------------S----------------------------S-----------------------S-
----------------------------------S----------------------S-------------------SS-
---------S------------------------SS-------------------SS--------------------S--
-------------------------------------------------------------------------------S
--------S-------------------S-----------S----------------S---S-------------S----
-SSSSS---------------------S--------S------S-----------S-S----------------S---S-
--------S----S-----------S-S-SS-SS--S------------S-----------S-------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_663
--------------------------------------------------------------------------------
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---CCGCTGCGATGTTGATCATC---------------------------------------------------------
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>reverse_6586
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-------------------------ATGCGCCGCTCAATGACTAT-----------------------------------
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---------------------------------------------------------------------------
>forward_6097
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-----------------------------------------------------------------------------TGC
ATGTAGGGTTTGACGGG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_6956
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGCCT
CGCTAAGCTAACGTC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
