>input_sequence_45560
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--------------------------------------------------------------ATGAGCGGCCGCGCCGGA
GAC---------CACGCCCTCCCCGCCTCCTCCCCCGCCGAACCCGATCCGGAGGCGCCGTCCCCGATGAGCGGCGGCGA
CTTCCCGGGCGACCTCCTGCGGGCGGTCCTGCACCGGCTCCCGCCCGCGGACGTCGCGCGGGCGGCCTGCGTCTGCCGCC
TCTGGCGCGCCGTCGCCTCCGACCGCGCCGTGCTGGAGGCCGCCTTCCGCGCGCCCTGGGGCGTGCGCCGCGTCCTCGGC
GACCCGGCCACCAGGGCCTTCTGGCGCGCCGCCTCCCTCGCCCGCTTCGCGCTCTCGCACACCGTCCGGCGCGGGGACAC
CGTCCCCGGCGTCGCGCTTAAGTATTCCGTCCAGGTATCA--------------TCTGC----CCTCCCCGTCTAAAGCT
TAGTCTTCAGCTGTCGT--TGTTAGCTGAATCGTACCTTGTGTTGCTCTGGTTTC---TGAAGCAGCACCAACCCATACT
GAATTTGGCAGATTCCGT---ACTAGTATCAAATCCCATAATATCGAATACTGCAAACATGTATGACGCGAGACTATGTC
TTCTTAGTTCTTATCACGACATAGATTTCTTGGAACTTGAACTAGAACTATGGAAGTCATGAGTGATTGCTTAACAGATA
GTCT---TAAGGTAAAATGAAGAAAAGTTGCAAGCCACCACAATAATTTCTGATCATGAAGAACAGTCAACGTTTTCACT
GTCGCAGAACTCACCACCGTTGTTGTTGGCATAGCTCATCACGTTTTAATCGTTGGCTATCTGATAATGCTCATGATACA
ACGTTTGATGATAGAATAGATACACTGCTTCCATAGTTCTGCCAATACTCGTTGCTCGGCTGTATCAATTTAAATGTTGA
ATGTTC-----TAATCGATAGTACGGCTGTAGTGGCT-----TACTTTGTTAGGTCTCAAAGTAATTGAGCTAGCTCTTG
AGGTTTGGTTTCCATAATGTTGCCACAATTGATAGTAAGGCAAGGCTGTAGAATGCCCATGCACCTTCAGCTAATAACCC
TTTTTTTATCTTCAATGATGCTGATATAGAGGTAATCTA-----------------------------------------
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---------------------------------------------------------------------------AAACA
TTGACCACACACATGTTCAGACTTTTTGGACTACTGTTATTGACAAAGCTGTCTATGCAACTTAAATTTGAAAACAATTG
GTATCCTCAGCTACTTCATTTGCGAGTGGCTGAAAGCTGGTAATTTGTACCATTCCAGGCAAATATTTCCGCTGTTTCAG
AAAGTTATACAGCTGTACTGTGCATGTGTGAGCAAACCTTCTTTATTCTTCGTCAAACCTTATCTGATATTCTGTGAGTT
TCAAGCAGGTGACCGATATCAAACGGTTCAACAATATGATGAGTGACCACGGTATCTACTCAAGGGAGAGGCTTCTGATA
CCAATCAGTGATCCAGAAATCCTGCTGGGTAGCACATGCTACATTGAGATGGATCACAACTCAAAGAGAGAGGTCGCGGT
CTTCTATCCCGAGGGCCACCCGAATGGAAACGCAGAATCCGTGGCGAACGCTGCAGCTGCAAAAAGGCGAAGCAAACGGA
TTCTCGAGTCGGTGAGGCGGAGCTTGCACGTTGACGACGGAACTGCCGAGTACTACCTGTCCGTCACAGGTGGCGATCCG
AGAGCTGCTATGATGGAGTTCTCGGAGGACCTTAGGTGGGAGCAGCGACAAACGGGCCACTAG-----------------
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>chr4D_1_TraesCS4D01G035300
AACTTGTCAAGATTCTGAAAAATTATTTTGTATGCCAAATGTTGCTCTGGCTTCATGTATGTGTAATACAATCCAGAAGA
TAGAGCAGGCAGTCTCTCAAGGGTTTCCTTGTCGGTTCCCTTCTGTTGAGTTATGACCAGGCTTTCAACCGCATTGTCTT
CATGAGTTTCAGTGTGGTAGCCATTCATGCGGATATCCTTAAAACTCAACAGGGTACGAGTTGAATCCGGATACAATAAA
GCCTCCTGGATTTCAAGTTTTGTACCATTCGGGAGTGTAAATGTGGCTTGACCAGAATCAACAATTACCGTGTCATGACC
ATCAATTGTCATAACACTTCCCTTACTCTTTTTGAGACTTCGGAAGTATTTAACTTCCCTTAGAGTTGTGTTAGAGGCAC
CACTGTCCACTAAACAAATTTCCTCCTTCATTGGATTGTTTCTCGAAGTTTTCTTTTCCTTTCTTCCCTTTTGGTTCTC-
TTTTTCGGCGACTGTCGCCGGCGTGATTTGCCTATGCGTGCTCTGTGCAGAGGC-AAGTGCTGATAACGTGTAAAAAAAT
GATCTGATCGAACAGTCGGTT---TCATTGATGATCCATGAGGATTATATACATAGGAAATCGTCGCCAC-GAACGGATG
CGTCCGATCGT-GGGGTCGTGGGAATGTCGAACGGGTGCCTGCGGC-AACCGACGTCC----GTTTACAC-AAGTGA-GA
TTATCTCTAATAACAGAATTAATTTAAATCCTAACAGAAAAAAAGCCGGGCAAGGAAGACGAAATAAAATCCGCTTTATC
CTTGGCAAAGAAAAAGATAACACAAGGCGTGGAGGAATTCTGCGGTG----CAACGCCGGGCTGCTGTGGTGCGGTCCGC
GAGCTGTGCACGCACCGCTCTTGCGCGCCAACCACATCTCTCCATTTCCCCTGCCTTGCCTTCTTCCCCCGTCCGCACAC
GCCGCCTCGCCTCCTTCCC----CCATCCACCCGCGCGATCCTCCACCTCCTCCCGATCGCCATGAGCGGCCGCGCCGGA
GAC---------CACGCCCTCCCCGCCTCCTCCCCCGCCGAACCCGATCCGGAGGCGCCGTCCCCGATGAGCGGCGGCGA
CTTCCCGGGCGACCTCCTGCGGGCGGTCCTGCACCGGCTCCCGCCCGCGGACGTCGCGCGGGCGGCCTGCGTCTGCCGCC
TCTGGCGCGCCGTCGCCTCCGACCGCGCCGTGCTGGAGGCCGCCTTCCGCGCGCCCTGGGGCGTGCGCCGCGTCCTCGGC
GACCCGGCCACCAGGGCCTTCTGGCGCGCCGCCTCCCTCGCCCGCTTCGCGCTCTCGCACACCGTCCGGCGCGGGGACAC
CGTCCCCGGCGTCGCGCTTAAGTATTCCGTCCAGGTATCA--------------TCTGC----CCTCCCCGTCTAAAGCT
TAGTCTTCAGCTGTCGT--TGTTAGCTGAATCGTACCTTGTGTTGCTCTGGTTTC---TGAAGCAGCACCAACCCATACT
GAATTTGGCAGATTCCGT---ACTAGTATCAAATCCCATAATATCGAATACTGCAAACATGTATGACGCGAGACTATGTC
TTCTTAGTTCTTATCACGACATAGATTTCTTGGAACTTGAACTAGAACTATGGAAGTCATGAGTGATTGCTTAACAGATA
GTCT---TAAGGTAAAATGAAGAAAAGTTGCAAGCCACCACAATAATTTCTGATCATGAAGAACAGTCAACGTTTTCACT
GTCGCAGAACTCACCACCGTTGTTGTTGGCATAGCTCATCACGTTTTAATCGTTGGCTATCTGATAATGCTCATGATACA
ACGTTTGATGATAGAATAGATACACTGCTTCCATAGTTCTGCCAATACTCGTTGCTCGGCTGTATCAATTTAAATGTTGA
ATGTTC-----TAATCGATAGTACGGCTGTAGTGGCT-----TACTTTGTTAGGTCTCAAAGTAATTGAGCTAGCTCTTG
AGGTTTGGTTTCCATAATGTTGCCACAATTGATAGTAAGGCAAGGCTGTAGAATGCCCATGCACCTTCAGCTAATAACCC
TTTTTTTATCTTCAATGATGCTGATATAGAGGTAATCTA-----------------------------------------
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---------------------------------------------------------------------------AAACA
TTGACCACACACATGTTCAGACTTTTTGGACTACTGTTATTGACAAAGCTGTCTATGCAACTTAAATTTGAAAACAATTG
GTATCCTCAGCTACTTCATTTGCGAGTGGCTGAAAGCTGGTAATTTGTACCATTCCAGGCAAATATTTCCGCTGTTTCAG
AAAGTTATACAGCTGTACTGTGCATGTGTGAGCAAACCTTCTTTATTCTTCGTCAAACCTTATCTGATATTCTGTGAGTT
TCAAGCAGGTGACCGATATCAAACGGTTCAACAATATGATGAGTGACCACGGTATCTACTCAAGGGAGAGGCTTCTGATA
CCAATCAGTGATCCAGAAATCCTGCTGGGTAGCACATGCTACATTGAGATGGATCACAACTCAAAGAGAGAGGTCGCGGT
CTTCTATCCCGAGGGCCACCCGAATGGAAACGCAGAATCCGTGGCGAACGCTGCAGCTGCAAAAAGGCGAAGCAAACGGA
TTCTCGAGTCGGTGAGGCGGAGCTTGCACGTTGACGACGGAACTGCCGAGTACTACCTGTCCGTCACAGGTGGCGATCCG
AGAGCTGCTATGATGGAGTTCTCGGAGGACCTTAGGTGGGAGCAGCGACAAACGGGCCACTAGATGCAGGCTCTA-----
--ATATGCAGGGGCATTGGTGTGTAGGTGAGTATACATATCA---------------TTTGATGATTTCCACCTACTTCT
CTGCTTGGACCATTTTT-GGTTTGCCCTCTCTTATGTGTAATATAGT---GTGAAACTGTGGACCTTTGTAAGATGAAAC
TTATACATGTAAGTTGAACTTAAAAGTTAATAACTGTAGCAAGTACTGGGTGGCATACAAGCCAGGACTCCAAGAACAGT
CAAGTATAGCATCTGTTGTTGTATTAGAAGTGAAATCCTCTCCCCTAAATTATTTTATTGCACTCATTGTAGCCCATACA
CCGAATTCGGGCTCACTTTCGCATCATTTTAAATCTAGGATTTGCTAATCCTCGGTTGACTGTTCCTTGTTTTTTCTTTT
TGCAAATCTTGATCACAATTACGGCTGTACTGAAGTGTCATGTACTTATTTCTTCTTTTATGAGGGTAAAAGTACTCCAG
AAATGCTGTCGATTATAGATAAAATTTAGTTTCAGTATTTGTTAGTTTTTCTTTATTTTGTAAACTGCTGTTTTAGTTTT
TCTGTTAAAGTAATATACTTTTTTTTAGAAATGTTAAAGTAATATAAGTATTTTTAGAGGTAAAGCCACATTGTATTGAT
CAAAGTCCAAAGTTGGATGCGGCTGGCCAAGCCATACATGACGCCCCTGAGCTAGAGTAAGAGCAAACTTAGCTAATCTA
TGAGATTCGAAATTAACATCATGACTCTCAAGAGTACAGATACAAGAAAAAGGAGCTGATCTAGACTTGATTTCATTGAT
AATCGTTCCGTAAGCACCTTGGTTGCCCTTCAAAATGTCACCCACCACTTGTTTACAGTCTGAAGCTATTATGAAGTTGT
GGATTTGGAGGTCTTCCACCAATGAAATTGCCTTACGACAGGCTATGGCCTCCAAAGTTGCAGGATCACAGACACCTCGA
ACAACGAGGGCAGAACTTCCCAGATAATTACCATGGCTGTCCTGACAGA
>chr7A_1
AACTTGTCAAGATTCTGAAAAATTATTTTGTATGCCAAATGTTGCTCTGGCTTGATGTATGTGTAATATAGTCCAGAAGA
TAGAGCAGGCAGTCTCTCAAGGGTGTCCTTGTTGGATCCCATCTATTGAGTTATGAGTAGGCTTTCAACCGCATTGTCTT
CATGAGTTTCAATGTGGTAGCCATTCATGCGGATATCCTAAAAAC-CAACAGGGTACGAGTCGAATCCGGATACAATAAA
GCCTCCTGGATTTCAAGTTTTGTACCATTCGGGAGTGTAAATGTGGCTTGACCAGAACCAACAATTACTGTGTCATGACC
ACCAATTGTCATAACACTTCCCTTACTCTTTTTGAGACTTCGGAAGTATTTAACTTCTCGTAGAATTGTGTTAGAGGCAC
CACTGTCCACTAAACAAATTTCCTCCTCCATTGGATTGTTTTTTGAAGTTTTCTTTTCCATTCTTCCCTTCTGGCTCTC-
TTTTCCGGCGACTGTCGCCGGCATGATTTGCCTATGCGTGCTCTGGGCAGAGAC-AAGTGCTGATAACGTGTGAA-GAAT
GATTTGATCGAACCGTAACTT---TCATTGATGATCCATGAGGATTATATACATAGGGAACCATTGCCAC-GAACGGATG
CGTCCGATCGTTGGGGTCGTGGGAATGTCAAACGGATGCCTATAGC-AACCGATGTCC----GTTTACAC-AAGGGAGGA
TTATCTCTAATAACAGAATTAATTTAAATCCTAACAG-------------------------------------------
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>chr6B_1
AACTTGTCAAGATTCTGAAAAATTATTTTGTATGCCAAATGTTGCTCTGGCTTGATGTATGTGTAATACAGTCCAGAAGA
TAGAGCAGGTAGTCTCTCAAGGGTTTCCTTGTCGGATCCCTTCTGCTGAGTTATAAGCAGGCTTTCAACTGCATTGTCTT
CATGAGTTGCAATGTGGTAGCCATTCATGCGGATATCCTTAAAACTCAATAGGGTACGAGTTGAATCCGGATACAATAAA
GTCTCCTGGATTTCAAGTTTTGTACCATTCAGGAGTGTAAATGTGACTTGACCAGAACCAACAATTACTGTATCATGACC
ACCAATCGCCATAACACTTCCCTTACTCTTTTTGAGACTTCGGAAGTATTTAACTTCCCTTAGGATTGTGTTAGAGGCAC
CAATGTCCACTAAACAAATTTTCTCCTCCATTAAATTGTTTCTGGAAGTTTTCTTTTTCTTTCTTCCCTTCTGGTTTCCT
TTGTCCGGCGATTGTCGCCGGCGTAATCTGCCTATGCGTGCTCTGGGCAGAGAT-AAGTGTTGATAACGTGTGAAAGAAC
AAATTGATCGAACTA--TCTT---TCATTGATGATCCATCAGGATTATATACATAGGGAACCGTCGCCGC-GAAAGGATG
CGTCCAATCGTGGGGGTCGTGGGAATGTCGAACGGGTGCCTGTGGC-AACCGACGTCC----GTTTACAC-AAGGGAGGA
TTATCCCTAATAACAGAATTAATTTAAATCCTAACA--------------------------------------------
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>chr6B_1
AACTTGTCTAGATTTTGAAAAATTATTTTGTATACCAAATGTTGCTCTGGCTTGATGTATGTGTAATACAATCCAGAAGA
TAGAGCAGGCGGTCTCTCAAGGGTATCCTTGTCGGATCCCTTCTGCTGAGTTATGAGCAGGCTTTGAACCACATTGTCTT
CATGAGTTTCAATATGGTAGCCATTCATGCGGATATCCTTAAAACTCAAAAGGGTACGAGTTGAACCCGGATACAATAAA
GCCTCCTAGATTTCAAGTTTTGTACCATTCCGGAGTGTAAATGTGGCTTGACCAGAACCAACAATTACCGTGTCATGACC
ACCA-TTGTCATAACACTCCCCTTACTGTTTATGAGACTTCAAAAGTATTTAACTTCCCGTAGAATTGTGTTAGAGGCAC
CACTGTCCACTAAACAAATTTCCTCCTCCATTGGATTGTTTCTCGAAGTTTTCTTTTCCTTTCTTCCCTTCTAGTTCTC-
TAATCCGGCGACTATCGCCGGCGTGATTTGCCTATGCGTGCTTTGGGCAGAGGC-AAGTGCTGATAACGTGTAAAACAAG
GAATTGACCAAAGTGTCTCTT---TCATTGATGATTCA--AGGATTATATACATGGGGAACGGTCGCCAC-GAGCGGACG
C-------------GGGCGTGGGTATTTCGAACCGTTGCCATACCCAAACCGGCGGCT----GTTTACACAAAGGGAGGA
TTATCCCTGATTATAGAATTAGTTTAAATCCTAACAAGAA----------------------------------------
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>chr5B_1
AACTTGTCAAGATTCTGAAAAATTATTTTGTATGCCAAATGTTGCTCTGGCTTGATGTATGTGTAATACAGTCCAGAAGA
TAGAGCAGGCAGTCTCTCAAGGGTTTCCTTGTTGGATCCCTTCTGCTGAGTTATGAGCAGGCTTTCAACCGCATTGTCTT
CATGAGTTTCAATGTGGTAGCCATTCATGCGGATATCCTTAAAACTCAACAGGGTACGAGTTGAATCCGGATACAATAAA
GCCTCCTGGATTTCAAGTTTTGTACCATTCGGGAGTGTAAATGTGGCTTGACCAGAACCAACAATTACCGTGTCATGACC
ACCAATTGTCATAACACTTCCCTTACTCTTTATGAGACTTCGGAAGTATTTAACTTCCCGTAAAGTTGTGTTAGAGGCAC
CACTGTCCACTAAACAAATTTCCTCCTCCATTGGATTGTTTCTCAAAGTTTTCTTTTCCTTTCTTCCCTTCTGGCTCTC-
TTATCCGGCGACTGTCGCCGGCGTGATTTGCCTATGCGTGCTCTGGGCAGAGAC-AAGTGCTGATAACGTGTAAAAGAAT
GATTTGATTGAAGTA--TCTT-ATTCCATTGATGATCA--CAT-------------------------------------
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>chr1D_1
AACTTGTCAAGATTCTGAAAAATTATTTTGTATGCCAAATGTTGCTCTGGCTTGATGTATGTGTAATACAGTCCAGAAGA
TAGAGCAGGAAGTCTCTCAAGGGTTTCCTTGTCGGATCCCTTCTGCTGAGTTATGAGCAGGCTTTCAACCGCATTGTCTT
CATGAGTTTCAATGTGGTAGCCATTCATGCGGATATCCTTAAAACTCAACAGGGTACGAGTTGAATCCGGATACAATAAA
GCCTCATGGATTTCAAGTTTTGTACCATTCGGGAGTGTAAATGTGGTTTGCTCAGAACCAACAATTACCGTGTCATGACC
ACCAATTGTCATAACACTTCCCTTACTCTTTATGAGACTTCGGAAGTATTTAACTTCCCGTAGAATTGTGTTAGAGGCAC
AACTGTCCACTAAACAAATTTCCTCCTCCATTGGACTGTTTCTCGAAGTTTTCTTCTTCTTTCTCCCCTTCTTGTTTCGT
TTCTCCGGCGATTGTCGCCGGCGTAATTTGCCTATGCGTACTCTGGGCAGAGAC-AAGTGCTGATAACATGTTTAAGAAC
GAATTGATCGAACTC--ACTCAATTCCATTAAGGATCA--CAGTTTATATACAAGGAGAACGAACGCGATTGAAAGTACG
CGTCCG-TCGT-GGGGGCGTGGGAGAACCGCCGCGTCGGTTGCCAGGCAATCCGCACGATCGGTTTGTAC-AAGGGAGGA
TTATCCCTAATTATTGAATTAAATTAA-TCCTAACAGA------------------------------------------
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>chr5D_1
AACTTGTCAAGATTCTGAAAAATTATTTTGTATGCCAAATGTTGCTCCGACTTGATGTATGTGTAATACAGTCCAGAAGA
TAGAGCAGGCAGTCTCTCAAGGGTTTCCTTGTCGGATCCCTTCTGCTGAGTTATGAGCAGGCTTTCAACCGCATTGTCTT
CGTGAGTTTCAATGTGGTAGCCATTCATGCGGATATCCTTAAAACTCAACAGGGTACGAGTTGAATCCGGATACAATAAA
GCCTCCTGGATTTCAAGTTTTATACCATTCGGGAGAGTAAATGTGGCTTGACCAGAACCAACAATTACCGTGTCATGACC
ACCAATTGTCATAACACTTCCCTTACACTTTTTGAGACTTCGGAAGTATTTAACTTCCCGTAGAATTGTGTTAGAGGCAC
CACTGTCCACTAAACAAATTTCCTC-TCCATTGGATTGTTTCTCGAAGTTTTCTTCTCCTTTCTTCCCTTCTAGTTTGCT
TTCTCCGGCGATTGTCGCCGGCGTGATTTGCCTACGTGTGCTCTGGGCAGAGTCGAAGTGCTAATAACGTGTGAAAGAAT
GAATTGATCGAACTATTGC-T-ATTCCGTTAAGGATCA--TATTTTATATACAAGCAGAACAGACGTGATTGAAAGGATG
CGTCCG-CCGT-GAGGGCGTGGGAGAACTGCCGCGTCGGTTGGCA-GCAATCCGCACGAGCGGTTTGTAC-AAGGAAGGA
TTATCCTTAATTATAGAATTAAATTAA-TCCTAACATGAA----------------------------------------
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>chr1B_1
AACTTGTCAAGATTCTGAAAAATTATTTTCTATGCCAAATGTTGCTTTGGCTTGATGTATGTGTAATACAATCCAGAAGA
TAGAGCACGCAGTATCTCAAGGGTTTCCTTGTTGGATCCCTTATGCTGAGTTTTGAGCAGGCTTTCAACCGCATTGTCTT
CGTGAGTTTCAATGTGGTAGCCATTCGTGCGGATATCCTTAAAACTCAACAGGGTACGAGTTAAATCCGGATACAATAAT
GCCTCCTGGATTTCAAGTTTTGTACCATTCGGGAGTGTAAATGTGGCTTGGCCAGAACCAACAATTACCGTGTCATGACC
ACCTATTGTCATAACACTTACCTTGCTCTTTTTGGGACTTCGGAAGTATTTAACTTCCCGTAGAATTGTGTTAGAGGCAC
CACTGTCCACTAAACAAATTTCCTCCTTCATTGGATTGTT-CTCGAAATTTTCTTTTTCTTTCTTCCCTTCTAGTTCTC-
TATTCCGGCGACTATCGCTGGCGTGATTTGCATATGCGTGCTCTGGGCAGAGGC-AAGTGCTGATAACGTGTGAACGAAC
GATTTGATCGAAC-------------------------------------------------------------------
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>chr4B_793
AAAGAGAG------------------------------------------------------------------------
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-------------AAGATAACACAAGGCGTGGAGGAATTCTGCGGTGGGTGCAACGCCGGGCTGCTGTGGTGCGGTCCGC
GAGCTGTGCACGCACCGCTATGGAGCACCAACCACATCTCTCCATTTCCCCTGCCTCGCCTTCTTCCCCCGTCCGCACAC
GCCGCCTCACCTCCTTCCCCCATCCATCCACCCGCGCGATCCTCCTCCCGATCGC---CGCCATGAGCAGCCGCGCCGGA
GAC---------CGCGCCCTCCCCGCCTCCTCCCCCACCGAACCCGATCCGGAGGCGCCGTCCGCGGTGAGCGGCGGCGA
CTTCCCGGCCGACCTCCTGCGGGCGGTCCTGCACCGGCTCCCGCCCGCGGACGTCGCGCGGGCGGCCTGCGTCTGCCGCC
TCTGGCGCGCGGTCGCCTCCGACCGCGCCGTGCTCGAGGCCGCCTTCCGCGCGCCCTGGGGGGTGCGCCGCGTCCTCGGC
GACCCGGCCACCAGGGCCTTCTGGCGCGCCGCCTCCCTCGCCCGCTTCGCGCTCTCGCACGCCGTCCGTCGCGGGGACAC
CGTCCCCGGCGTCGCGCTCAAGTACTCCGTCCAGGTATCATATCTATCTCTCTATCTGTCCATCCTCCCCGTCTGAAGCT
TATTCTTCAGGTATATTGATGTTAGCTGAATCCTACTTTGTGCTGCCTTGCTGCCTGACGAGGCAACACCAGCCCATGCT
GAAATTGGCAGACTCCGT---AGCAGTATCAAAGCCCATAGTACTCACAGGATGG-------------------------
-----AGTTCTTATCACAGGATGGAGTTCCTGCAACTTGAACTAGAACTATGGAGGTCATAATTGATTGTCTAACAGATA
GCG----TAATGTAAAATAAGCAAAAGTTGCAAGTCACTACAATAATTTCTGGTCATGGAAAACAATCAACGTTTTCACT
GTCGCAGAACTCACCGCCGTTGTTGTTGGCATAGCTCATCACGTTTTGATCGTTGGCTATCTGATAATGCTCATGATACA
ACGTTTGATGATG-----GATGCACTGCTTCCATAATTCTGTCAGTACTCGTTGCTCGGTTGTATCAATTAAAATGTTGA
ATGTTGTACTGTAATTAATAGTGAGGCTGTAGTGAATTACTCTACTTTGTTAGGTCTTAAATTAATTGAGTTAGCTCTCA
AGGTTTGGTTTCCATAACGTCTCAACAATTGATAGTAAGGA-----TGTAGAATGCCCATGCACCTTGAGCTGATAACCC
TTTTT--ATGTTCACTGTTGCTGATATAGAGCTAATCCG-----------------------------------------
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----------------------------------------------------------------------------AACA
TTGACCACACGCATGTTCAAACTTGTTGGATTTCTGTTATTTACAAAGCTGTCAACGCAACTTAAATTTGTAACAGTGAA
----------------CATTTGTGAATGCCTGAATGCTGCTAATTTATATCATTCCAT--------------TGTTTCCA
AAAGATATACAGCTGTACTGTCCATGTGTGAGCAAACCTTCTCTATTCTTCATCTAACCTTATTTGATATTCTGTGGATT
TCAAGCAGGTGACCGATATCAAACGGTTCAACAATATGATGAGTGACCATGGTATCTACTCAAGGGAGAGGCTTCTTATA
CCAATCAGTAATCCAGAAATCTTGTTGGGTAGCACATGCTACATTGAGATGGATCACAACTCAAAGAGAGAGGTCGCGGT
CTTTTATCCGGAGGGCCACCCGAATGGAAACGCGGAATCCATGGCAAACGCTGCAGCTGCAAAAAGGCAAAGCAAACGGA
TTCTCGAGTCGGTGAGGCGAAGCTTGCATGTTGATGACGGAACTGCCGAGTACTACCTGTCCGTCACAGGTGGCGATCCG
AGAGCTGCTATGATGGAGTTCTCGGAGGACCTTAGGTGGGAGCAGCGACAAGCAGGCCAATAGATGCAGGTCAGTGGGAA
GTATATGCAGGGATATTGGTGTGTAGGTGAGTATACATATACATATACATATATCATTTTGATGATTTCTACCTACTTGG
CTGCTTGAACCATTATT-GGTTTGCCCTCTCCTATGTGTAATATAGTAATGTGGAACTGTGGACCTCTGTAAGGTTAACT
TA------------------------------------------------------------------------------
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>chr4A_988
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-------------------------------------------------CCTCCCGGTCGCCATGAGCAGCCGCGCCGGA
GACGTCGCCGGCCACGCCCTCCCCACCTCCCCCGCCACCAAACCCGGCCCGGAGGCGCCGTCCCCGATGAGCGGTGGCGA
CTTCCCGGCCGACCTGCTGCGGGCGGTCCTGCACCGGCTCCCGCCCGCGGACGTCGCGCGGGCGGCCTGCGTCTGCCGCC
TCTGGCGCGCCGTCGCCTCCGACCGCGCCGTGCTGGAGGCCGCCTTCCGCGCGCCCTGGGGCGTGCGCCGCGTCCTCGGC
GACCCGGCCACCAGGGCCTTCTGGCGCGCCGCCTCCCTCGCCCGCTTCGCGCTCTCGCACACCGTCCGTCGCGGGGACAC
CGTCCCCGGCGTCGCGCTCAAGTACTCCGTCCAGGTATCA--------------TCTGTCTATCCTCCCCGTCTGAAGCT
TATTCTTCAGGTATCGG--TGTTAGCTGAATCCTACCTTGTACTGCTTTGGTGCCTGATGAGGCAACACCAACCCATACT
GAACTTGGCAGATTCCGTGCTAGTAGTATCAAATCCTATAATATCGCAAG--------ATGTATGATGCGAGACTATGCC
TTCTTAGTTCTTATCACAGGATGGGGTTCCTGGAACTTGAATTACAACTATGGAAGTCATGAGTGATTGTCTAACAGATA
GTCTATCTAATGTAAAATAAGCAAAAGTTGCAAGTCACTACAATAATTTCTGATCATGAAAAACAATCAACATTCTCACT
GTCGCAGAACTCACCACCGTTGTCATTAGCATAACTCATCATGTTTTAATTGTTGGCTATCTGATAATGCTCATGATACA
ACGTTTGGTGATAGAACAGATACACTTCTTCCCGAATTCTGTCAATACTCATTGCTCGGTTGTATCAGTTAAAATGTTGA
ATGTTC-----CAATCGATAGTAAGGCTGCAGTGGCT-----TACTTTGTTAGGTCTCAAAGTAATTGAGCTAGCTCTCG
AGGTTTGGTTTCCATAATGTTGCCACAATTGATAGTAAGGCAAGGCTGTAGAGTGCCCATGCACCTTCAGCTAATAACCC
TTTTT--ATCTTCAATGTTGCTGATATAGAGTTAATCTGAACGAGAATGCTAAATTCCTGCCGACTGTCAGTTTGCAACA
GATCCGCACGAATCGCGCGCCGTTGGATCTGAATCCTACGATTGACCGCGCCTTCCGATCTGTTCTTTCTTGCGTCCACT
GTTTCCCGCTAATCACGTGATCTCCCACATCCCGCTTATCCCGCCCGTGATCTCCACCTCCCACTTATCCCGTTTCTGGT
GGATGCTGGTTTCGATGGAAAAATGAAAAATAAATAATTTGCGAGTACTAGGACTCGAGCCCACAACCCCTTGAAAGTTT
CAGCACGCACAGACCAACCCGCTAACTAATGTTGTTTGTCTTGGTTTTACATGTTTCTAGTTGAGTTAACTAGTTCGACA
AAATGAAATCGTAATTTGCTGGGTTGGGCGAGATTTGCTCCAAATTTAGTGGTTCTTGCCATCTATCCCGAGCATGGTAA
TATACACAGCGCTTAGCTGGTAACTTAATTAGCTGAAACATGGTAACTTTTTGAGCCTGCTATTTTTTTGTTGGAAAACA
CCTTCGGTAACTCATGTGTAAATAACTTGGTATATACATATAGCAGACCTGATAAGTTACCGAGCCTAGACACGATAACT
TTCTTGACCCGGGAAAAAAAGTTGTTGAAAAGCATACATCCGGTAATTTATTGAACAACGTGGTAATTGTGACCCTAGAT
TTTTTTTTTGCTCTAAACATACTCTCGATAACTCATGTACATACGAACGCCATGTTAACTTTGGAAAGAATGGAGAAAGA
GTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCATAGACCCGAT
AACTTATGTGCCCCGGTCCTAGAAACTTTGTCGATAACTTCGGCGAGGGTGGGGGTGGGGGGAGTCGTTGGAACATACCA
CGGTAACTTCTGTGCAAATAACATGATATCTCAAACATGGCAGACCAAATAACTTATGTACCCCGGTCCTGATAACTTGA
TCAGCGAGGGTGGGGGTGGGGCAAGTCGCTGAAACATGCCACGATAACTTCTGTGCAAAAAACATGATAACTCATACATG
GTAGACCTAATAACTTATGTACCCGATCCTGGTAAATGTGGCGACTGTGGCGAGGGAGGGGGGGGCAACCCCGGTAATTT
CTATGTAAATAGCATGGTAACAGACACATACAAAGTTGATAACTCCCATAGAAACGCCACTGTAATTTTTGACCAGATTT
ATTTGTTGAAAAACATACACCCGGGAATTTCTGTGTAAAAAGCATGATATCACAGACTTGATAACTAATATCTTACGTTT
TAAACACCATGTTATCTTTCATCCAAGGGGGAACAGTTTTTGAAACATTTTCACCAGTAATTCCCGTGTTAAATTGCCAT
ACTTCCCCATGCCTTAACCTTCTCGTACTGTAGTTACCAGCCTTATCATGTTGCTCATACCATAGTAATCACGCTGGTCA
TGCCAAAGTTACCAAGCCAAACTTTATTTTTTCTGATATGGCAGAAATAAGAAAGGTTCAGATAACATTGTTTGTCTACA
ATAGACAACAACAAATGTTGGTTTAGTTGGTCATTAGGCTCAACCACTATTGCATAGACCTGGGTTCAAATCCTATTTCA
AGCACTTCCATTTTCTTCTCATATTACGCGTAGGAACTAGTCGTGCGGACTGGTCGTTAGCACAGTCCTAATCTGAAACA
TTGACCACACACATGTTCAGACTTTTTGGACTACTGTTATTGACAAAGCTGTCTATGCAACTTAAATTTGAAAACAATTG
GTATGCTCAGCTACTCCATTTGTCAGTGGCTGAATGCCGGTAATTTGTACCATTCCAGGCAAATATTTCCACTGTTTCAG
AAAGATATGCAGCTGTACTGTGCTTGTGTGAGCAAACCTTCTCTGTTCTTCGTCAAACCGTATCTGATATCATGTGAACT
TCAAGCAGGTGACCGATATCAAACGGTTCAACAACATGATGAGTGACCACGGTATCTACTCGAGGGAGAGGCTTCTGATA
CCAATCAGTGATCCAGAAATCCTTCTGGGGAGCACATGCTACATTGAGATGGATCACAACTCAAAGAGAGAGGTCGCCGT
CTTTTATCCCGAGGGCCACCCGAATAGAAACGCAGAATCCGTGGCAAACGCTGCAGCTGCAAAAAGGCAAAGCAAACGGA
TTCTCGAGTCGGTGAGGCGAAGCTTGCATGTGGATGACGGAACTGCCGAGTACTACCTGTCCGTCACAGGTGGCGATCCG
AGAGCTGCTATGATGGAGTTCTCGGAGGACCTTAGGTGGGAGCAGCGACAAGCGGGCCATTAGATGCAGGCCAGTGGGAA
GTATATACAAGGGTATTGGTGTATAGGTGAGTATACATATCA---------------TTTGATGATCTCTACGTACTTGT
CTGCTTGAACCATTACTGGGTTGCCCCTCTCCCATGTGTAATATAGTAATGTGGAACTGTGGACCTGTGTAAGGTAAACT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>SNPs
-----------------------------------------------------S--------------------------
-----------------------------------S--------------------S-----------------------
-----------S--------------------------------------------------------------------
---------------------------------------------------------S----------------------
-S------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
----S----------------------------------------S------------------------------S---
---S---------S----S--------------------------------------S--S-------------------
--------------------------------------------------------------------------S-----
----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS-------------------------------------------------------------------
-------------------S-S-S--S-----------------------------S-----------------------
--------S------------------------------------S--S-------S-----------S-----------
------------------------------------S-------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------------S-----S---------------------------------S---------------S-----
--S-------S-S-------------------S---------S----S----SS-------S---S--------------
---S------------------S-------------------------SSSSSSSSSS--------S-----------S-
-----------------SSS--S--S---S---------------------------------------SS---------
----------S-------S-SS------------S---S---------------------S----S--------------
--------------------------------------------------------------------------------
----------------S------------------S-----S-----------------S----------S---------
-----------------------S------------------------------------------------------S-
--------------------------------------------------------------------------------
-----SS----------S-------------S------S-----------------------------------------
--------------------------------------------------------------------------------
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----S----------S------S-----------S-----------------------------------S---------
----S-------------------------------------S----------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-----------------------------------------S----------------------S-----------
-------------------S--------S-----S---------------------------------------------
---------------------------------------------------S-------S-----------SSSS-----
-------------S-------------------------------------------------------S--------S-
-------S------S----------------S---------------------S------------S------S-S--SS
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TTTGCCTATGCGTGCTCTGT----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_4263
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGAGTGGCTGAAAGCTGGTA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_779
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AAAAAGCCGGGCAAGGAAGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_4660
--------------------------------------------------------------------------------
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-------------------GAGCTTGCACGTTGACGAC------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_937
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CTCTCCATTTCCCCTGCCTT-----------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_5013
--------------------------------------------------------------------------------
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----------------------------------------------------GCATACAAGCCAGGACTCCA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
