>input_sequence_45527
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--ATGCAAATCGGCGCCGCGAGCTCTGTCGTGCGACTGGTGAGCTTGTATCCAATGTCAGTATGCCGCTTAATTACCTTT
TTTTCCTCC---TCGTAGATGCTTTGCCTGCGCTCCTTCGCTTCTGCTGGGGGTGCGTGTTTGCTTAGCCATTTTCGCTA
TTTTTGGCTGATTCGCGGATGG-TTTGCCAGCTGATCAGATCCGCGCACAAGGGCAGCGGTGGCCGGCCGCGCCGGGAGC
ACGGGGTGATGAAGGGCCCGGACAAGAGGAGCAGCACGCAGGGGAGCGCCGCGTTCCAGTCGCTGCGGCTCGTCTTCGTC
CTCGCGACCGTCATGTGGGCGTCCTTCCTCTACTACCACTTCACCGCGCTCAGCGCCGGGGCAATGAGGGCGACGGTGCT
GGACGGCGCCAGCGCCGACCCGTGCCGGGGCCGGTACGTCTACGTGCACGACCTGCCGCCGCGCTTCAACGCCGACATCC
TCCGCGACTGCCAGAACACCAGCGACCAGTAC------CGCTGGCCCGACATGTGCGGCTT---CGTCAGCAACGCCGGC
CTGGGCCGCCCGCTCGCCGACCCGCTCGACGGGGACTTCACCGGCGACAACGGCTGGTACGGCACCCACCAGTTCGCGCT
CGACGCCATCTTCCACAACCGGATGTGGCAGTACGAGTGTCTGACGACCCACTCCGCCCTCGCCAACGCCGTCTTCGTCC
CCTTCTACGCCGGCTTCGACTTCGTGCGCTACCACTGGGGCTACGACAACGCCACCAGGGACGCCGCGTCGGTCGACCTC
ACGGACTGGCTCATGCGCCGGCCGGAGTGGGCGCGCGC---------GGGCGGGAGAGACCACTTCCTCGTCGCCGGCAG
GACGGGGTTTGACT--------------------TCCGGCGGAGCAACAACATGAACCCGAGCTGGGGCACCAACCTGCT
CAACATGCCGGGCGGGCGGGAGATGTCGGTGCTGGTGCTGGAGGTGTCACGGGTGCCCCATAGCCGGGAGTACGCTGTGC
CGTACCCGACCTACTTCCACCCGAGGTCCGACGCCGACGTGCGCCGGTGGCAGGAAAGGGTGCGCGGTCTGGAGCGCCGG
TCGCTGATAGCGTTCGTCGGCGC------ACCGCGGCCGGACAACCCGTACAACATCCGGCAGCAGA------TCATCGC
GCAGTGCGAGGCCTCCGACGCGTGCCGGCAGCTGGGCTG------------------CGCGTTCGGCACCAGCCAGTGCC
ACACCCCCGGCAACATCATGCGGCTGTTCCAGAGGGCCACCTTCTGCCTGCAGCCCACCGGCGAC------------TCC
TACACGCGGCGGTCGGCGTTCGACTCCATGGTGGCCGGCTGCATCCCGGTGTTCTTCCACCCGGTGTCGGCGTACCTGCA
GTACAGGTGGCACCTCCCGGAGCACCACGAAACGTACTCGGTGTTCATCCCGGAGGACGGCGTGCGGTCGCGGAACGTGA
GCATCGAGGCCGTGCTCCGGGCGATCCCGCCGGAGACGGTGGAGCGGATGCGGGACGAGGTGATAAAGCTGATACCCAGG
CTGGTGTACGCGGACCCAAGGTCGAAGCTGGAGACGGTGAAGGACGCCTTCGACGTCGCCGTCAAGGGGATCATCGACAG
AGTGGCCAGGGCCCGGGCCGAGGCGGCGGGGGAGGACTCGTCGTTCAGTCACGCCATGGAGATGTTTAGGTTCCGGAGAA
AGTAA---------------------------------------------------------------------------
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------------------------------------------------------------------
>chr4A_1_TraesCS4A01G408200
ATGTGGTCCATCAGCAATGAACCGTCCATCCATGGTTCGACGACGGGATCCGTCGGTGCAAGATCTGCCAGAGCACTGTT
AATTA----------------ATACAAACTTGGAGATTGAAATTAGCGTTTACTTTGATTAATCTCCAAGCTTCTGTTGA
CCAAACGTGCACCGCACCTCCCTTCTCCTGAAGCAGGAGCAGTACAGCCCA------AGTGTACAACCGACGCTCGATCC
AAATTTCTTC----------CC-CTCTCTCTTTTCTTGCATGTGGAGGATGCAAATTTCTTCCTTGGGCCAGTAGAGCAA
TGGCTAAGGCTGATCACAATGGGGAGGAACTTAAGAGTAACACACACTTCAATATAATTTTGCTTATGTGTCACATATTT
AATAAAGAGAGAGGTGTTTGTGGTAACTAGCTAAGTTACCGAAACATCACACACTCCAAGAAACAATGAGTCTATAACCT
AATAAATACATTGTTGCATGACACTACATAGATGTTCCTACCTACTACGGAGGTAGTAATATAGTTTAGGGAAGTGTGTA
AGTTACTAACTTATGTTCTTGTCCATTGTGACCAGCCTAAACAAGCAAGCACGTAATTAATGTGCGCGCTAGTACTAAAA
TTCCCACTGTCCAGCGTC-AAGTGTCAACGCTGCACGCCGAACCGCGCTCATTAATTTGCACCAGTGAGTAGAAAACACC
ATCAACTAGGAGTAGTATTAGATCGATGTAGACGGTGGTTAGCAGTGAAACAACCACTAGCTCCACGAGGCTAGCTACCA
CCCAGTGTCCCAGTCAACTAATCCCCCACGAACTCCACCGTGCGTGAAGTCTACTCCTTCGCACCGCCACTCCCGGCGGC
TCGTCGCTCGTTCATCGCCCCGACTTCCCGGCGACGTCGATCTACACCATTTTTAGGTTTATAAG-------TATAAACT
ATACTAGTCTTCGTCTTCCTCCTGTCGATCGATCTGCTTGCCGTTTCTGGAGTACTA-TATATAGTTGCTGCACGCCGCG
GCATGCAAATCGGCGCCGCGAGCTCTGTCGTGCGACTGGTGAGCTTGTATCCAATGTCAGTATGCCGCTTAATTACCTTT
TTTTCCTCC---TCGTAGATGCTTTGCCTGCGCTCCTTCGCTTCTGCTGGGGGTGCGTGTTTGCTTAGCCATTTTCGCTA
TTTTTGGCTGATTCGCGGATGG-TTTGCCAGCTGATCAGATCCGCGCACAAGGGCAGCGGTGGCCGGCCGCGCCGGGAGC
ACGGGGTGATGAAGGGCCCGGACAAGAGGAGCAGCACGCAGGGGAGCGCCGCGTTCCAGTCGCTGCGGCTCGTCTTCGTC
CTCGCGACCGTCATGTGGGCGTCCTTCCTCTACTACCACTTCACCGCGCTCAGCGCCGGGGCAATGAGGGCGACGGTGCT
GGACGGCGCCAGCGCCGACCCGTGCCGGGGCCGGTACGTCTACGTGCACGACCTGCCGCCGCGCTTCAACGCCGACATCC
TCCGCGACTGCCAGAACACCAGCGACCAGTAC------CGCTGGCCCGACATGTGCGGCTT---CGTCAGCAACGCCGGC
CTGGGCCGCCCGCTCGCCGACCCGCTCGACGGGGACTTCACCGGCGACAACGGCTGGTACGGCACCCACCAGTTCGCGCT
CGACGCCATCTTCCACAACCGGATGTGGCAGTACGAGTGTCTGACGACCCACTCCGCCCTCGCCAACGCCGTCTTCGTCC
CCTTCTACGCCGGCTTCGACTTCGTGCGCTACCACTGGGGCTACGACAACGCCACCAGGGACGCCGCGTCGGTCGACCTC
ACGGACTGGCTCATGCGCCGGCCGGAGTGGGCGCGCGC---------GGGCGGGAGAGACCACTTCCTCGTCGCCGGCAG
GACGGGGTTTGACT--------------------TCCGGCGGAGCAACAACATGAACCCGAGCTGGGGCACCAACCTGCT
CAACATGCCGGGCGGGCGGGAGATGTCGGTGCTGGTGCTGGAGGTGTCACGGGTGCCCCATAGCCGGGAGTACGCTGTGC
CGTACCCGACCTACTTCCACCCGAGGTCCGACGCCGACGTGCGCCGGTGGCAGGAAAGGGTGCGCGGTCTGGAGCGCCGG
TCGCTGATAGCGTTCGTCGGCGC------ACCGCGGCCGGACAACCCGTACAACATCCGGCAGCAGA------TCATCGC
GCAGTGCGAGGCCTCCGACGCGTGCCGGCAGCTGGGCTG------------------CGCGTTCGGCACCAGCCAGTGCC
ACACCCCCGGCAACATCATGCGGCTGTTCCAGAGGGCCACCTTCTGCCTGCAGCCCACCGGCGAC------------TCC
TACACGCGGCGGTCGGCGTTCGACTCCATGGTGGCCGGCTGCATCCCGGTGTTCTTCCACCCGGTGTCGGCGTACCTGCA
GTACAGGTGGCACCTCCCGGAGCACCACGAAACGTACTCGGTGTTCATCCCGGAGGACGGCGTGCGGTCGCGGAACGTGA
GCATCGAGGCCGTGCTCCGGGCGATCCCGCCGGAGACGGTGGAGCGGATGCGGGACGAGGTGATAAAGCTGATACCCAGG
CTGGTGTACGCGGACCCAAGGTCGAAGCTGGAGACGGTGAAGGACGCCTTCGACGTCGCCGTCAAGGGGATCATCGACAG
AGTGGCCAGGGCCCGGGCCGAGGCGGCGGGGGAGGACTCGTCGTTCAGTCACGCCATGGAGATGTTTAGGTTCCGGAGAA
AGTAAGTTACTCGTAGTACCAACCAAAATAGATGCAGAATCCATTGACAGAATGTAGATCAAGTCGATATTATAATTTGT
GATATGTGCCACTCAATTTATTATACATACATCTTCTAATTTGTCATCTACAGTAATTGATTATAACAGTGCTAGAAGAA
GCATCGTGTAAGCCAAGGTATAGCGTGGTGTGATCTTCATACTTGAGAT---------------------GTGTGTGAGA
CTAAACTGTATTCATGCTTCATTAGATCATTTAGATGTTTAATAACTATGGCACATTTAGATGTGTTCTAGACAGACCCT
GTTTTTTACATCAACCCACATAATCTTCTAGTATCCGGTAAAATACACGAATCGTCATATTAGAAAAATGACCGATTCGT
TGTTTTAAAAGCTTCAGGTACAGCCTTGTGAATCTCAGACTGACTGAATTGATTTCATCAACTAATTAAATTTTTGGCTT
TTGTTACTGGTAAATCGCTTGAATTTACAACTCTTGATATTTGATTTCCGGAGAGCGCGCACGTCCTGAGTTGGAATTGG
GCCGCAGTGTCCTTGGCGACGCCGAGCCGGGAGTGACATGGAGTGGGGGACGGCGTGGATGCGGTGTTGTCGGTGCTCAC
TAGAGTTGAAGAAGGCGGCGGGGTTAGGGGGTGGCCGAGGGCTATGGTTCACCTGCAAAGGTGGCGGCTTGAGGAGGGTG
AGGCGACATGAAGCATGTTGATGATGCAGGTCCTAAAGCAACTTACAAATACTTAAGTTTTGGCCGTCCAAAGCCCAAAT
CAGGATGCAGTTAGGAAACTTCAGCACCGTGCAACAAAATACTTCTAAATGTCTGAACATTTATTTTGTCATCCAACATC
GTGCATCAAATGTTCGTGGATTGGTCTGAACGTTCGAATTCGCACAATCCGTAAGAAAACAGGGGTGGGGAGGGGGGGGG
GGAGCTTTGCGGGCCTCCGGACGCATGCTACATTAGCATCTGGCTACACAGTCCCACCCAAAGCCC
>chr4D_32
-------------------------------ATGGATCGACGATGGGATCCGTCGGTGCAAGATCTGCCAGAGCACTGTT
AATTATCAATTCAGTAGTTGTATACAAACTTGGAGATT--AATTAGCGTTTACTTTGATTAATCACCAAGTTTCTGTTGA
CCAAATGCACACCGCGCCTCCCTTTTCCTGAAGTAGGAGTAGTACAGTACTAGTACGAGTGTTCAACCGACGCTCGATCC
AAATTTCATCATTTCTCTCTTCTCTCTCTCTTTCTTTGCATGTGGAGGAAGCAAATTTTTTCCTTGGGCCAGTACAGCAA
TGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TAAACAAGCAAGCATGTAATTAATGTGCGCGCTAGTACTAAAA
TTCCCACTGTCCAGTGTC-AAGTGTCAACGCTGCACGCCGAACCGCGCGCATTAATTTGCACTGGT-AGTAGAAAACACC
ATCAACTAGGAGTAGTATAGATCGCCAG-AGACAGTGGTTAGCGGTAAAACAACCACTAGCACCACCAG----GCTACCA
CTCAAAGTCCCAGTCAATTAACCCCCCACGAACTCCACCGTGCGTGAAGTCTACTCCTCCCTACCGCCACTCCCGGCGGC
TCGTCGCTCGTTCATCGCCGCAACTTCCCGGCGACGTCGATCTACAACATTATTAGGTTTATAAATATAATCTATAC---
-TACTAATCTTCGTCTTCCTCCTCTCGATCGATCTGCTTGCCATTTCTGGAGTACTA-TATATATGTTGT--GCGCCGCG
GCATGCAACTTGGCGTCGCAAGCTCTGTCGTACGACTGGTGAGCTTGTATCCAATGTCAGTATGCCGCTTA----CCTTT
TTTCCTCCTCGTACGTAGATGCCTTGCTTGCGCTCCTTCGCTTCTGCTGGGGGTGCGTGTTTGCTTAGCCATTTTTCTTC
TTTTCGGCTGATTCGCGGATGATTTTGCCAGCTGATCAGATCCGCGCACAAGGGCGGCGGCGGCCGGCCGCGCCGGGAGC
ACGGGGTGATGAAGGGCCCGGACAAGAGGAGCAGCACGCAGGCGAGCGCCGCGTTCCAGTCGCTGCGGCTCGTCTTCGTC
CTCGCGACCGTCATGTGGGCGTCCTTCCTCTACTACCATTTCACCGTGCTCAGCGCCGGGGCGAGGAGGGCGACGGTGCT
GGACGGCGCCAGCGCCGACCCGTGCCGGGGGCGGTACGTCTACGTGCACGACCTGCCGCCGCGCTTCAACGCCGACATCC
TCCGGGGCTGCCAGAACACCAGCGACCAGTAC------CGCTGGCCCGACATGTGCGGTTT---CATCAGCAACGCCGGC
CTGGGCCGCGCGCTCGCCGACCCGCTCGACGGGGACTTCACCGGCGAGAACGGCTGGTACGGCACCCACCAGTTCGCGCT
CGACGCCATCTTCCACAACCGGATGCGGCAGTACGAGTGCCTGACCACCCACTCCGCCCTCGCCAACGCCGTCTTCGTCC
CCTTCTACGCCGGCTTCGACTTCGTCCGCTACCACTGGGGCTACGACAACGCCACCAGGGACGCCGCGTCCGTCGAGCTC
ACGGACTGGCTCATGCGCCGGCCGGAGTGGGCGCGCAT---------GGGCGGGCGAGACCACTTCCTCGTCGCCGGCAG
GACGGGGTTTGACT--------------------TCCGGCGGAGCAACAACATGAACCCGAGCTGGGGCACCGACCTGCT
CAACATGCCGGGCGGGCGGGAGATGTCGGTGCTGGTGCTGGAGGTGTCACGCGTGCCGCATAGCCGGGAGTACGCCGTGC
CGTACCCGACCTACTTCCACCCGAGGTCCGACGCCGACGTGCGCCGGTGGCAGGACAGGGTGCGCGGTCTGGAGCGCCGG
TCGCTGATAGCGTTCGTCGGCGC------GCCGCGGCCGGACAACCCGTACAACATCCGGCAGCAGA------TCATCGC
GCAGTGCGAGGCCTCCGACGTGTGCCGCCTGCTGGGCTG------------------CGGGTTCGGCACCAGCCAGTGCC
ACACCCCCGGCAACATCATGCGGCTGTTCCAGAGGGCCACCTTCTGCCTGCAGCCCCCCGGCGAC------------TCG
TACACGCGGCGGTCGGCGTTCGACTCCATGGTGGCCGGCTGCATCCCGGTGTTCTTCCACCCGGTGTCGGCGTATCTGCA
GTACTGGTGGCACCTCCCGGTGCACCACGAAACGTACTCGGTGTTCATCCCGGAGGACGACGTGCGGTCGCGGAACGTGA
GCATCGAGGCCGTGCTCCGGGCCATCCCGCCGGAGACGGTGGAGCGGATGCGGGACGAAGTGATCAAGATGATACCCAGG
CTGGTGTACGCGGACCCAAGGTCGAAGCTGGAGACGGTGAAGGACGCCTTCGACATCGCCGTCGAGGGGATCATCGACAA
AGTGGCCAGGGCCCGGGCCGAGGCGGCCGCGGACGAGTCGTCGTTCAGTCACGCCATGGAGATGTTTGGGTTCCGGCGAA
AATAAGTTACTCGTAGTACCAACCAAAATAGATGCATAATCCATTGACAGAATGTAGATCAAGTCGATATTATAATTTGT
GGTATGTGCCACTCAATTTATTATACATACATCTTCTAATTTGTCATCTACAGTGATTGATTATAACAGTGCCAGAAGAA
GCAT-------------------CGTGGTGTGATCTTCATACTTGAGATTGATCTTCATATACTTGAGATGTGTCTGAGA
CTAAACTG------------------------------------------------------------------------
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------------------------------------------------------------------
>chr4B_32
-------------------------------ATGGATCGACGATGGGATCCGTCGGTGCAAGATCTGCCAGAGCACTGTT
AATTGATTCGGTAGTAGTAGTATACAAACTTGGAGACT--AATTAGCGTTTACTTTGATTAATCTCCAAGTTTGTGTTGA
CCAAATGTACACCGCACCTCCCTTTTCCTGAAGTAGGAGTAGTACAGGTACGAGTGTA--GTACAGCCGACGCTCGATCC
AAATTTCTTCATATCTCTCCCC-CTCTCTCTCTCTTTGCATGTGGAGGAAGCAAATTTCTTCCTTGGGCCAGTACAGCAA
TGGT----------------------------------------------------------------------------
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-------------------------------------TAAACAAGCAAGCATGTAATTAATGTGCGCGCTAGTACTAAAA
TTCCCACTGTCCCGTGTCAAAGTGTCAACGCTGCACGCCGAACTGCGCGCATTAATTTGCAC---T-AGTAGAAAACACC
ATCAACTAGGAGTAG-----ATCGCCAG-AGACAGTGATTAGCAGTAAAACAACCACTAGCACCACCAG----GCTACCA
CTCAAAGTCCCAGTCAATTAAT-CCCCACGAACTCCACCGTGCGTGAAGTCTACTCCTTCCTACCGCCACTCCCGGCGGC
TCGTCGCTCGTTCATCACCGTAACTTCCCGGCGACGTCGATCTACAACATTA---GGTTTATATATAAATACTATAAACT
ATACTAATCTTCGTCTTCCTCCTCTCGATC----TGCTTGCCATTTCTGGAGTAGTACTATATATGTTGT--ACGCCGCG
GCATGCAAATTGGCGTCGCAAGCTCTATCGTACGACTGGTGAGCTTGTATCCGATGTCAGTATGCCGCTTA----CCTTT
TTTTCTCCTCGATCGTAGATGCCTTGCTTGCGCTTCTTCGCCTCTGCTGGGGGTGCGTGTTTCCTTAGCCATTTTTCTTC
TTTTCGGCTGATTCGCGGATGAT-TTGCCAGCTGATCAGATCCGCGCACAAGGGCGGCGGCGGTCGGCCGCGCCGGGAGC
ACGGGGTGATGAAGGGCCCGGACAAGAGGACCAGCACGCAGGCGAGCGCCGCGTTCCAGTCGCTGCGGCTCGTCTTCGTC
CTCGCGACCGTCATGTGGGCGTCCTTCCTCTACTACCATTTCACCGTGCTCAGCGCCGGGGCAAGGAGGGCGACGGTGGT
GGACGGCGCCAGCGCCGACCCGTGCCGGGGGCGGTACGTCTACGTGCACGACCTGCCGCCGCGCTTCAACGCCGACATCC
TCCGGGACTGCCAGAACACCAGCGACCAGTAC------CGCTGGCCCGACATGTGCGGCTT---CATCAGCAACGCCGGC
CTGGGCCGCCCGCTCGCCGACCCGCTCGACGGGGACTTCACCGGCGAGAACGGCTGGTACGGCACCCACCAGTTCGCGCT
CGACGCCATCTTCCACAACCGGATGCGGCAGTACGAGTGCTTGACGACCCACTCCGCCCTCGCCAACGCCGTCTTCGTCC
CCTTCTACGCCGGCTTCGATTTCGTCCGCTACCACTGGGGCTACGACAACGCCACCAGGGACGCCGCGTCGGTCGAACTC
ACGGACTGGCTCATGCGCCGCCCGGAGTGGGCGCGCGC---------GGGCGGGCGAGACCACTTCCTCGTCGCCGGCAG
GACGGGGTTTGACT--------------------TCCGGCGGAGCAACAACATGAACCCGAGCTGGGGCACCAACCTGCT
CAACATGCCGGGCGGGCGGGAGATGTCGGTGCTGGTGCTGGAGGTGTCACGGGTGCCGCATAGCCGGGAGTACGCCGTGC
CGTACCCGACCTACTTCCACCCGAGGTCCGACGCCGACGTGCGCCGGTGGCAGGACAGGGTGCGCGGCCTGGAGCGCCGG
TCACTGATAGCGTTCGTCGGCGC------GCCGCGGCCGGACAACCCGTACAACATCCGGCAGCAGA------TCATCGC
GCAGTGCGAGGCCTCCGACGTGTGCCGCCTGCTGGGCTG------------------CGGGTTCGGCACCAGCCAGTGCC
ACACCCCCGGCAACATCATGCGGCTGTTCCAGAGGGCCACCTTCTGCCTGCAGCCCCCCGGCGAC------------TCG
TACACGCGGCGGTCGGCGTTCGACTCCATGGTGGCCGGCTGCATCCCGGTGTTCTTCCACCCGGTGTCGGCGTATCTGCA
GTACTGGTGGCACCTCCCGAAGCACCACGAAACGTACTCGGTGTTCATCCCGGAGGACGACGTGCGGTCGCGGAACGTGA
GCATCGAGGCCGTGCTCCGGGCCATCCCGCCGGAGACGGTGGAGCGGATGCAGGACGAGGTGATCAAGATGATACCCAGG
CTGGTGTACGCGGACCCAAGGTCGAAGCTGGAGACGGTGAAGGACGCCTTCGACGTCGCCGTCGAGGGGATCATCGACAG
AGTGGCCAGGAACCGGGCTGAGGCGGCGGCGGAGGACTCGTCCTTCAGTCACGCCATGGAGATGTTTGGGTTCCGGAGAA
AATAAGTTACTCGTAGTACCAACCAAAATAGATGCAGAATCCATTGACAGAATGTATATCAAGTCGATATTATGATTTGT
GATATGTGCCACTCAATTTATTATACATACATCTTCTAATTTGTCATCTACAGTAATTGTTTATTACAGTGCTAG-----
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>chr4A_1410
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---------------CGACCCGTGCCGGGGACGGTACATCCACGTTTGCAAGCTGCCGCCGCGCTTCAACACCGACATGA
CGCGCGACGCCTGTCG------------CGGCGATGGGCGCTGGCCCGCGGGCGCGTGCGAGTCCATCGACAATGCCGGC
CTCGGCCCGCCGCTCGCCGACCCGGCCGACGGCGTGCTCACCGGCGAGGACGGGTGGTACGGCACGCGCCAGCTCGCCCT
CGACATCATCTTCCACAACCGGATGAAGCGGTACGAGTGCCTCACCAACCACACCGCCGTGGCCACCGCCGTCTTCGTGC
CGTTCTACGCCGCCCTCGACTTCGCCCGCTACGCC---GGCCAGGACAACGTGACGCGGGACGCCGCGTCGGTCGACCTG
GCGGAGTGGCTCAAGTGGCGGCTCCTGTACGATCAGCAATGGCCCCAGGACGGCCACGACAATTTCCTCGTCGCCGGGAG
GACGGCGCGGGACCTGGCGAGGGATGGCGGCAACTCCGGCGG--------------CCCGAACTGGGGCACGAACCTCCT
CGCCAGGCCGGTTGGCCGGAACCTGTCGGTGCTCGTCTTGGAGTCGTCGCTGGCGCCGAACGCGAGCGAGTTCGCCGTGC
CGTACCCGACCTACTTCCACCCCAGGACCGACGCCGACGTGTTCCGGTGGCAGGACAGGGTGCGCGGCCTGCAGCGGAAG
TGGCTCATGGCGTTCGTCTCCGGCAAGCCGCGGGGGACGGAGAAGGCAGCAACGGCGACCATCCACGACCATGTCATGGC
CCAGTGCAAGGCGTCGGACGCGTGTGGGCACCTGCCGCCGGACCCGGACTGCGCTACCGGGACCGACCACGGTGAGTGCC
ACTCCCCTGTCAAGGCCATGCGGCTGCTCCAGAGCGCGACCTTCTGCCTGCATCCACCGCCAGGCGGCTCGCCCCCGTCG
TACACGCGGCGGTGGGTGTTTGACGCGATGGTGGCCGGGTGCATCCCGGTCTTCTTCCACCCGGCGTCGGCGCACCTGCA
GTACAGGTGGCACCTCCCCGAGGACCACGCCAAGTACTCGGTGTTCATCCCGGAGGCCGGCGTCCGGGCGGGCACGGCGA
GCATCGAGGCCGTGCTCCGGGCGATCCCGGCGGCGACGGTGGCGCGGATGCGGGAGGAGGTGGTGAGGCTCATCCCGCAG
GTGGTCTACGCCGATCCCCGGGGGAAGCTGGAGACTGTCAAGGACGCCTTCGACATCGCCGTCGACGGGATGCTCGACAG
GGTGGCAAGGCTCCGG----------------------------------------------------------------
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------------------------------------------------------------------
>chr4B_1410
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---------------CGACCCGTGCCGGGGACGGTACATCCACGTGTACCCGTTGCCACCGCGCTTCAACACCGACATGA
CGCGCGACGCCTGCCGCGGCGATAACAACGGCGGCGGGCGCTGGCCCGCGGGCATCTGCGAGTCCATCGACAACGCCGGC
CTCGGCCGGCCGCTCGCGGACCCGGCCGACGGCGTCCTCACCGATGAGGACGGGTGGTACGGCACGCGCCAGCTCGCTCT
CGACATCATCTTCCACAACCGGATGAAGCGGTACGAGTGCCTCACCAACCACACCGCCGTGGCCACCGCCATCTTCGTGC
CGTTCTACGCCGCCCTCGACTTCGCCCGCTACGCC---GGCCAAGACAACGTGACGCGGGACGCCGCGTCGGTCGACCTG
GCGGAGTGGCTCAAGTGGCGGTTCCTGGACGACCGGCAACGGCCCCAGGATGGCCACGACAATTTCCTCGTCGCCGGGAG
GACGGCGCGGGACCTGGCGAGGGATGGCGGCAACTCCGGCGG--------------CCCGAACTGGGGCACGAACCTCCT
CGCCAGGCCGGTCGGCCGGAACCTGTCGGTGCTCGTCTTGGAGTCGTCGCTGGCGCCGAACGCGAGCGAGTTCGCCGTGC
CGTACCCGACCTACTTCCACCCCAGGACCGACGCCGACGTGTTCGGGTGGCAGGACAGGGTGCGCGGCCTGCAGCGGAAG
TGGCTCATGGCGTTCGTCTCCGACAAGCCGCGGGGGACGGACAACGCAGCAACGGCGACCATCCACGACCATGTCATGGC
CCAGTGCAAGGCGTCGGACGCGTGTGGGCACCTGCAGCCGGACCCGGACTGCGCCACCGGGACCGACCACGGCCAGTGCC
ACTCCCCTGTCAAGGCCATGCGGCTGCTCCAGAGCGCGACCTTCTGCCTGCATCCACCGCCAGGCGGCTCACCCCCGTCG
TACACGCGGCGGTGGGTTTTTGACGCGATGGTGGCCGGGTGCATCCCGGTCTTCTTCCACCCGGCGTCAGCGCACCTGCA
GTACAGGTGGCACCTCCCCGAGGACCACGCCAAGTACTCAGTGTTCATCCCGGAGGCCGGCGTCCGGGCGGGCACGGCGA
GCATCGAGGCCGTGCTCCGGGCGATCTCGGCGTCGACGGTGGCGCGGATGCGGGGGGAGGTGGTTAGGCTCATCCCGCAG
GTGGTCTACGCCGATCCCCGGGGGAAGCTGGAGACTGTCAAGGACGCCTTCGACATCGCCGTCGACGGGATGCTCGACAG
GGTGGCAAGGCTCCGG----------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-------S------------------------------------
--------------------------------------SS------------------------------S---------
-----S--S---------------S--------S-----S-------SS-S-----------------------------
---------------------------------SS--------------S------------------------S-----
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S----------------------------
--------------S---------------------------------S-------------SS--S-------------
------------------SSSSSSSSS-S----S------------S--------------S----S--SSSS-------
-S--SS-----------S------------------------------------------SS------------------
-------------------S-S------------------------S----S------------S---------------
------S----------------S------------------S---------------------SS-SS-SS--------
----------S----S---S-----------S---------------------------------------SSSS-----
-----SS-S-------------S----S-----------------------------------------------SSS-S
----S----------------S---------------------------------S----S-------------------
------------------------------------------S-------------------------------------
--------------------------------------S-------S-----------------S---------------
------------------------------S-------------------------------------------------
-----------------------------------------------------------------S--------------
-----------------------------------------------S--------------------------------
-------------------------S-------------S----------------------------------------
-------------------------S------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S-----------------S----
-------------------------------------------------------S------------------------
-----------------------------S--------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------S----------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
---------------------------------------------------------------S----------------
-----------------------------S-------------------------------------S------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SSSSSSSSSSSSSSSSSSS---------------------------------------------------S-----
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_208
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----------------------------TGAAGCAGGAGCAGTACAGC--------------------------------
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------------------------------------------------------------------
>reverse_1706
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-------------------------TGGCAGTACGAGTGTCTGAC-----------------------------------
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>forward_790
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--------------------------------------------------CAACCACTAGCTCCACGAGG----------
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>reverse_2625
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AAAGCTGATACCCAGG
CTGG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_1720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GGATGTGGCAGTACGAGTGT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_3423
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGTGTTGTCGGTGCTCAC
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
