>input_sequence_45409
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATGCGCCTGCTT
CC-------------------GAATCGTTGCAAGTTCCATCGATCAGTTGCCGCTACAGACATGCCGGCCGTCAAGTCGG
AGTCTCCGGCGA---GCTGCTTGCCGGAGCTCCCACGCATCCGCACCACTCGCCCTGCTGCGGCCTCGTCCAAGGTAATA
GCAAGAGCCAAGGCGCACGGC------GATAGGAAGGCGAAAGCAGAGGACGATCGGGAGAAGCGGCACAAGAGTGGTAG
GGGGGCGTGTGATGAGTCGGCGGCGTGTGGGAGCTCACCGGAGCTGGAGAAGAGGAGGTGCTCCTGGATCACGGCCAACT
CTGGTGACAAACTTCGATTGCTCCCTGCTTCGTTTCGTTCCGTTCCCACTGTTCCCTAGAGTCCGTAATTTTGA-TCTGT
GAACTCCATGATATGAATTAATACT--TTGTCGGTTATCACAAGCATGTGAATTTTCAATTTTGAGCACG-----GATGA
GGGTGCAGTACACATTATAAGTTC---------------------------------TGATGCATGGTACCATCACTTCT
GTAGAACCCCTCTACGTTGCATTCCATGATGAAGAATGGGGAGCTCCGGTGCACAATGACCGTAAGCTGTTTGAGCTGCT
TACCTTATCACAAGCCTTAGCTGAGCTCTCCTGGCCTGTAATTTTGAGCAAGAGGGGGGAATTCAGGGAGATGATTGATG
CTTTCTACAATGCATCCGTCTGTGACCTCAAGGGCAAGAAGATAAACCAGTTGTCCAAGTCAAACGGAAGGACGTTGCTG
TCAGAGCAAAAGCTGCGAGCTGTGGTCGCAAACGCCAAGCAGATTCAAAAGGTAAATTTTGTTTATGGTGAATTCGAAAG
GTAGATTGAATATTGTACGCAAGTTTATCTAGTTTATCATTGCTTTATAAGACATATAAATTAATTTACTTTTTCATTCC
TCCAGCCAATCATAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AATGTTACAGCAGAG
GAGCTTCTTTCAAAATAAAATGAAGCCATGTCCCACCCCCTCAATAGAAGCCCAACAAGCCTTCGAATTTGCTATGGGCC
ATATGGCCTATACCTTGTGTGCTTTCAGAGTTTCAGATTCTGAACAATGTGACACAC-----------------------
--------------------------------------------------------------------------------
---TGACACTCGCATTAGTATTAGTATCGCACTGTAATATAGTCAGCGCTTGCTTTAA--AGAAGTACAAAACTGTTGGA
ACTGTTCTCAGACCGAATGCTTGTAATACGAA---CACCACCACTATATGCTAGACTTAACATTTCTCAGACCGAATGCT
TTGAAACCTG-----------------------------------TAGTATCCATGCAGCAAAACAGATTCAGTGGTTTC
CTTCGAACAAAATCGGCCCTTGGATTTCACAACTTCTGGCAGTACAAATAATATCCTCGCTATCGCCAATGACTATCTGC
AGGTAGTCCGTGAATTCGGATCGTTCGACAACTACTGCTGGAGCTTCGTGAACCACAGGCCCATCACAAACGGCTACCGC
CACGCTCGCCAAGTGCCCACCAAGACGCCCAAATCTGAGGCTATGAGCAAGGACCTGATGCGGCGAGGGTTCCAGTGCGT
CGGCCCCACGACGGTCTACTCCTTCATGCAGGTCGCCGGGATCGTAAACGACCACCTGCGGTGCTGCTTCAGGTTTGATC
AGGTTCGCAGCCAGCCCAAGGATGCCGAGGAGAACATGAGAGCCGAGATAAGATTGAGCTCACACGATTCAGAGGATTCA
GAGATCAGCGAGGTGTAG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr4D_1_TraesCS4D01G261700
TTGTCTTGTAGCGTTATGTCTCGTGTGTCTTCTGTAAATAGCTCATTTCTTTCGGTTCTCTTATAATTCCTAGTCATGCC
TCGCGTTTTACACTGCTGTATTTAGATTCTCTTATT---AACTGACCGTATCATGCCTTGTTGCTTCTTCAGGTGGTGAA
GAACACCTGCGGCTGGATTTCGCATAGCGCTACACTGCATTTTGGACACTGGTTACCACTTACCACTAGTAGCTACGTAA
TTGGCACGGAATGGCAACTAACGAGGCGCAGTTTTGTCAAAAGTTGGTAGGTTCGGTTTGAACT---CTCTAAGCTTGAC
TCAAGGACGATCCACATTACAATGCCGTTCCCTGCAGAACTGCATCCTGCTGCTGCTTCTGTTCCCTGCTGCAGTGATCA
AAAGTTGCCACCAAAAACTTGAATTGAGCTCTATT-------------------GATCTAACATGAATCCTGGTCCATTC
TTGAAGGGAACATTTGGATGTAAATTGTTCATCCTCTTGGAGCAAAACGATTCCCTGGTGCTGAAAGATACTCGGACCAA
TGCTGCTGCCCGCATCCTTGTGTTGTGTGTACACTCTTCTCCGTTTCCTTGTACAGAATGTGTATTTTCTCTTTGATTTG
AGTAGAAGAAGCCGTTGTCGCTGC---CGACGAGAACCACGTACGTACGTGGCGAGCCGCAGAGCCGGCTCGGTGCGGAT
GTGCGCTGCGCGCAAGCCGGATGGTGGAAGCGACAGGAAGGGGAGGTCCGGCTACGTGTGT------GCGTGTGGGTAGT
GGGGCGGTGCATGGCAACGCAACGCTTGCGCGTAACGGTATGAGGCGTCGGAGCCAAGCCAAAGCCACCCCTCCTCGTTC
GTGCCGAGGCCGTTGCGCCCGCACCCGATCGCGACCTCCAGCCCGCCCCGAAACAACGAGCACAAACTCCGTGGCCGCGT
AACGGACCCT----------------------------------------------------------------------
-TCC---TTTCGCCACTCGTTTCAAAAACCTCATTAGCCGCTGGCTCTTCAGGTCTGCGTCCATCTACATGCGCCTGCTT
CC-------------------GAATCGTTGCAAGTTCCATCGATCAGTTGCCGCTACAGACATGCCGGCCGTCAAGTCGG
AGTCTCCGGCGA---GCTGCTTGCCGGAGCTCCCACGCATCCGCACCACTCGCCCTGCTGCGGCCTCGTCCAAGGTAATA
GCAAGAGCCAAGGCGCACGGC------GATAGGAAGGCGAAAGCAGAGGACGATCGGGAGAAGCGGCACAAGAGTGGTAG
GGGGGCGTGTGATGAGTCGGCGGCGTGTGGGAGCTCACCGGAGCTGGAGAAGAGGAGGTGCTCCTGGATCACGGCCAACT
CTGGTGACAAACTTCGATTGCTCCCTGCTTCGTTTCGTTCCGTTCCCACTGTTCCCTAGAGTCCGTAATTTTGA-TCTGT
GAACTCCATGATATGAATTAATACT--TTGTCGGTTATCACAAGCATGTGAATTTTCAATTTTGAGCACG-----GATGA
GGGTGCAGTACACATTATAAGTTC---------------------------------TGATGCATGGTACCATCACTTCT
GTAGAACCCCTCTACGTTGCATTCCATGATGAAGAATGGGGAGCTCCGGTGCACAATGACCGTAAGCTGTTTGAGCTGCT
TACCTTATCACAAGCCTTAGCTGAGCTCTCCTGGCCTGTAATTTTGAGCAAGAGGGGGGAATTCAGGGAGATGATTGATG
CTTTCTACAATGCATCCGTCTGTGACCTCAAGGGCAAGAAGATAAACCAGTTGTCCAAGTCAAACGGAAGGACGTTGCTG
TCAGAGCAAAAGCTGCGAGCTGTGGTCGCAAACGCCAAGCAGATTCAAAAGGTAAATTTTGTTTATGGTGAATTCGAAAG
GTAGATTGAATATTGTACGCAAGTTTATCTAGTTTATCATTGCTTTATAAGACATATAAATTAATTTACTTTTTCATTCC
TCCAGCCAATCATAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AATGTTACAGCAGAG
GAGCTTCTTTCAAAATAAAATGAAGCCATGTCCCACCCCCTCAATAGAAGCCCAACAAGCCTTCGAATTTGCTATGGGCC
ATATGGCCTATACCTTGTGTGCTTTCAGAGTTTCAGATTCTGAACAATGTGACACAC-----------------------
--------------------------------------------------------------------------------
---TGACACTCGCATTAGTATTAGTATCGCACTGTAATATAGTCAGCGCTTGCTTTAA--AGAAGTACAAAACTGTTGGA
ACTGTTCTCAGACCGAATGCTTGTAATACGAA---CACCACCACTATATGCTAGACTTAACATTTCTCAGACCGAATGCT
TTGAAACCTG-----------------------------------TAGTATCCATGCAGCAAAACAGATTCAGTGGTTTC
CTTCGAACAAAATCGGCCCTTGGATTTCACAACTTCTGGCAGTACAAATAATATCCTCGCTATCGCCAATGACTATCTGC
AGGTAGTCCGTGAATTCGGATCGTTCGACAACTACTGCTGGAGCTTCGTGAACCACAGGCCCATCACAAACGGCTACCGC
CACGCTCGCCAAGTGCCCACCAAGACGCCCAAATCTGAGGCTATGAGCAAGGACCTGATGCGGCGAGGGTTCCAGTGCGT
CGGCCCCACGACGGTCTACTCCTTCATGCAGGTCGCCGGGATCGTAAACGACCACCTGCGGTGCTGCTTCAGGTTTGATC
AGGTTCGCAGCCAGCCCAAGGATGCCGAGGAGAACATGAGAGCCGAGATAAGATTGAGCTCACACGATTCAGAGGATTCA
GAGATCAGCGAGGTGTAGTTAGCCTCTGAAACTTGCCTTGCTTTGTACGTATGATACGATTCTTTATCTTGTATAGGTGT
GCTCATCTTGTGTTTA-CCTTC-GTCAGACATGGCAGTTGGTTTGGCTGTGCA---TTTTGTGGCGTGACTGGTGTCAGC
TCACTTGTAGTGTACGTACATTACAGGTTGTAAAAAATGGTGAAACAGGGTGCATGG----TCAAGGTGTGATTTGCTTT
CTTAATTGCATGTAAAGCATCTATATTGTGGAGT----------------------------------------------
------------------------------GTGTACTTTTCTGACTATTTGCACTCGTATGTATA---------------
-TACAAACATTGCTGACAATTA------------------TCCGTTTTCAAGGTTGTTCTTTTGACTCCAAAATGTAGCG
TATGAGCTTAT-----------------------------TGTTGCATGTGAGGAATACGGAGTGGTGTGTCGACATGGC
AACGATGCATTCGTCAGCCCTTATGTCACACACTTGCCTTGTATGGCAAAATCACAAGATAAAGTTTGTT--------AA
GCGAGCCCCTAAACAAACAAGCTAACCGTACCAACAAGAAAGTTCCACCACCTTTCATCCATCCATTCATCAAGC----T
GTTGTTAATTAGGCAACTAGAGTGACTAAGAAACACGTC----CCTAAACTAATCACGACACGATGGCCACGTTTCGCCT
CGCCGTGGCCGTGATCACCTTCCTTAAACCTCTCTCGCACATAACCCCTTTCTTTAACCCTGCACTTGGGGGCACTAC--
-TCAAACATTGGAATCAAATCATTTTGCCAAAAGAAAAGCCTACCACACTCCTCGAGGGCGGCATCCTCGGTATGTGTGC
GCCGGGGTCGCTCGCTCCGGTCACACGGCCAGTGCGCCTTCC-GTGCACGTGTCGCTCTTCGGGGCAGCCAGATCAGCGA
ACAAGAGCCCATGTCTTTGACACTGCAACCCTAGAGGAGCGCTTGTGTGATCCTTGCGGTGTGGCCGAAGCCGAAGTCCA
CAAAGCTAACGGGTTTGTTTA-ATTAGCGTTAATGAGGCTTTGTCCGGATGTTTCCCGGCGCGCTGG
>chr4A_1
TTGTCTTGTAGCATTATGTCTCGTGTGTTTTCTGTAAATAGCTAATTTCTTTCGGTTCTCTTATAATTCCCAGTCATGCC
TCGCATTTTACACTGCTGTGTTTAGACTCTCTTATTACTAACTGACCGTATCATGCCTTGTTGCTTCTTCAGGTGGTGAT
GAACACCTGCTGCTGGATTTCGCATAGCGCTACACTGCATTTTGGACACTGGTTACCACTTACCACTAGTTGGTACGGAA
TGGCAAGT---TGGCAACTAACGAGGTGCAGTTTTGTCAAAAGTTGGTAGGTTCGATTTGAACTAGTCTCTAAGCTTGAC
TGAAGGACGATCCACATTACAGTGCCGTTCACCACAGAACTGTATCCCGCTGCTGCTTCTGTTCCCTGCTGCAGTGATCA
AAAGTTGCCACCAAAAACTTGAATTGTGCTCAAGGTCTTAGTGACTGGTCTGTCGATCTAACATGAACCCTGGTCCATTC
TTGAAGGGAACATTTGGATGTAGATTGTTCATCCTCTTGGAGCAAAACGATTCCCTGGTGCTGAAAGATACTGGGACCAA
TGCTTGTGCCCGCATCCTTGTGTTGTGTGTACACTCTTCTCCGTTTCCTTGTACAGAATGCGTATTCCCTCTTC-----G
AGTAGAAGAAGCCGTTGTCGCTGCTGCCGACGAGAACCACGTAG-----------------GAGCCGGCTCGGTGCGGAC
GTGCGCTGCGCGCAAGCCGGATGGTGGAAACGACAGGGAGGTGAGGTCCGGCTACGTGTGTGGGTGTGCGTGTGGGTAGT
GGGGCGGTGCATGGCAACGCAACGCTTGCGCGTAACGGTACGAGGCGTCGGGGCCAAGCCACGGCCAC----CCTCGTTC
GTGCCGAGGCCGTTGCACCCGCACCCGT---------------------------------ACCAACTCCGTGGCCGCGT
AACGGATCCG----------------------------------------------------------------------
-TCGTCATTTCGCCGCTCGTTTCAAAC-CCTCATTAGCCGCTCGCTCTTCAGGTCTGCGTCCATCTACATGCGCCTGCTT
CC-------------------GAATCGTTGCAAGCTCCGTCGATCAGTTGGCACTTCAGACATGCCGGGCGTCAAGTCGG
AGTCTCCGGCGA---GCGGCTTGCCGGCGCTCCCGCGCATCCGCACCACTCGCCCTGCTGCGGCCTATTCCAAGGC---A
GCAAGAGCCAAGGCGCGGGCA------AGCACAAAGGCGGAAGCAGA---------GGAGAAGCGGCACAATGGTGGTAG
GGGGGCGTGTG------------------GGAGCTCACCGGAGCTGGAGAAGAGGAGGTGCTCCTGGATCACGGCCAACT
CTGGTGACAAACTTCGATTGCTCCCTGCTTCGTTTCGTTACGTTTCCACTGTTCCCTAGAGTCCGTAATTTTGA-TCTGT
GAACTCCATGATATGAAGTATATACT-TTATCAGTTATCACAAGCATGTGATTTCTCAATTTTGAGCACGCACGCCATGA
GGGTGCAGTACACATATAACTTCTTCTTTTTTTGAAACTTACACATATAACTTCTGATGATGCATGGTA-CATAACTTCT
GTAGAACCCCTCTACGTTGCATTCCATGATGAAGAATGGGGAGCACCGGTGCACGATGACCGTAAGTTGTTTGAGCTGCT
CACCTTATCACAAGCCTTAGCTGAGCTCTCCTGGCCTGTAATTTTGAGCAAGAGGGATGAGTTCAGGGAGATGATTGATG
GTTTCTACAATGCATCCGTGTGTGGCTGCACGGACAAGAAGATAAACCAGCTGTCCAAATCAAACGGAAGCACGTTGTTG
TCACAGCAAAAGATGCGAGCTGTGGCTGCAAACGCCAAGCAAATTCAAAAGGCAAGTTTTGTTTATGGTGAATTCAAATG
GTAAAATGAATATT-TACAAAATTTCCTCTAATTTATCGCTGAATGAG--GACATATAAATCATTATCA-TTTTCATTCC
TCCAACCAATCATAAGGGCCTCTTTGATTCATAGGATTTCCAAAACGTGGGATTAGAGTGGCATGTCATTTTGAATCCTA
TAGGATTGTATGAGTGTTTGATTGTGCATAGGAAAAACATAGGATTCTCTTAAAGATGTTTGAGAGGATGAAAAATTTCC
TATGAAATCTAGTGCAAATAAATCCTCTGAAAAAATTCCCGTGGTTTACAATCCTATGAATCAAACAACACACGTAGTAA
ATATTCCTAAGGATTTCAATCCTCCAAAAAATTCCTTGGAATCCTTTGAATCAAAGAAGCCCTAAAATGTTACAGCAGAC
TAGCTTCTTTCGAAATAAAATGAAGCCATGTCGCACCCACTCAATAAAAGCCCAACAAGCCTTTGAATTTGCTATGGGCC
ATATGGCCCATACCTTGTGTGCTTTCAGAGTTTCAGATTCTGCACAATGTGACACTCGCATCAGTATTAGTATCGTACTG
TAATATACAGTCATCAATTGCTTTTCAGAAGTACACAACTGTTCGAACTGTTCTCAAACCGAATGCTTATAACTCGAACA
ATGTGACACTCGCATCAGTATTAGTATCGTACTGTAATATACAGTCATCAATTGCTTTTCAGAAGTACACAACTGTTCGA
ACTGTTCTCAAACCGAATGCTTATAACTCGAACACCACCACCACTATATGCTATACTTATCATTTCTTGCTTGGATACTT
GGACTAATGCTACTCATGAATTATACCACTATTTTGCAACCTGTATAGTATCCGTTTGGCAAAACAGATTCAGTGGTTT-
CTTCGAACAAAATCGACCCTTGGGTTTCACAACTTCTGGCGTACC-AATAATATCCTCGCTATCGCCAATGACTATCTGC
AGGTAGTTCGTGAATTCGGATCGTTCGACAACTACTGCTGGAGCTTCGTGAACCACAGGCCCATCACAAACGGCTTCCGC
TACGCTCGCCAAGTGCCCACCAAGACGCCCAAATCTGAGGCTATGAGCAAGGACCTGATGCGGCGAGGGTTCCAGTGCGT
CGGCCCCACGACGGTCTACTCCTTCATGCAGGTCGCCGGCATCGTGAACGACCACCTACGGTGCTGCTTCAGGTTTGATC
AGGCTGGCAGCCAGCCCAAGGCCGCCGAGGAGAACATGAGAGCCGATATAAGATTGGGGTCTCCCGCTTCAGAGGATTCA
GAGATCAGCGAGGTGTAGTTAGGTCTCTGAACT----------------------------------------------T
GCTCATCTTGTGTTTA-CCTTCCGTCAGACATGGCAGTTGGTTTGGCAGTGCA---TTTTGTGGTGTGACTGGTGTCAGG
TCACTTGTAGTGTGAGTACATTATAGATTGTACAAAATGGTGAGACATGGTGCATGG----TCAAGGTGTGGTTTGCTTT
CTTAATTGCATGTAAAGCATCTGTATTGTGGAGTGTAAAATCGGTTGGCCATCATGCATGTATATATACTACACACAACA
TACATCACACATCATACAGTAAGCAGTGTGGTGTGGTTTTCTGACTATTTGCACCCGTATCTGTGCG-------------
---CAAACGATGATGACAATTA------------------TCCATTTCTATGGTTGTTCTTTTGACTCCTAAATGTAGCG
TATGAGCTTAT-----------------------------TGTTGC-----------------------GTCGACATGGC
AACGATGCATTCGTCAGCCCTTATGTCACACACTTGCCTTGTATGGCAAAATCACAAGATAAAGTTTGTTCCCTAGAGAA
ATGAACCCCTAAACAAACAAGCTAACCGTACCAACAAGAAAGTTCCACCACCTTTCA----TCCATCCATTCATCAAGTT
GTTGTTAATTAGGCAACTAGAGTGACTAAGAAACACGTCCCTCCCTAAACTAATCACGGCACGATGGCCACGTTTCGCCT
CGCCGTGGCCGTGATCACCTTCCTTAAACCTCTCTCGCACATAACCCCTTTCTTTAACCCTACACTTGGGGGCACTAC--
-TTAAACATTGGAATCAAATCATTTTGCCAAAAGAAATGTGTACCACACTCCTCGAGGGCGGCATCCTCGGTGTGCGTGC
GCCGGGGTCGCTCCCTCCGCTCACACGGGCGGTGCGCCTTCCGGTGCACGTGTCGCTCTTCGGAGGGGCCAGGTCGGCAA
ACACGAGCCCATGCCATTGACACGCAATGAC-AGAGGAGCGCTTGT-----------GGTGTGGCCGAAGCTGAGCTCCA
CAAAGCTAACGTGATTGTTTA-ATTAGCGCTAATGAGGCTTTGTCCGGATGTTTCCCGGCGCGCTGG
>chr4B_615
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
AGTAGAAGAAGCTGTTGTCGCTGC---CGACGGGAACCACGTGCGTGCGTGGCGAGCCGCAGAGCCGGCTCAGTGCGGAC
GTGCGCCGCGCGCAAGCCGGATGGAGGAAGCGACAGGGAGGGGAGGTCCGGCTAGGGCTACGTGTGTGCGTGTGGGTAGC
AGGGCGGTGCATGGCAACGCAACGCTTGCGCGTAACGGTACGAGGCGTCGGGCCGACGCC-AAGCCACCCCTCCTCGTTC
GTGCCGAGGCCGTTGCACCCGCACCCGACGGCGACGTCAAGCCCGAAACA-----------ACGAACTCCGTGGCCACAT
AACGGGATGACGTCTCTGCCCTCGCCCCTCGCCCCTCGCCCTGCGAGTAGGAGAGCAGAAGCTAACCACAGGGTAGACCC
GTCC---TTTCGCGACTCGTTTCAAAAACCTTATCAGCCGCTCGCTCTGCTCCAAACCATTGCAAGTTCATCCCAAAGAA
TCGTCGCAAGCTCATCTAAAAGAGTCGTTGCAAGCTCGACCG----GTTGCCACTTCAGATATGCCGGGCGTCAAGTCGG
AGTCTCTGGCGAGCGGCGGCTTGCCGGAGCTCCCGCGCATCTGCACCACTCGCCCTGC---GGCCTCCTCCAAGGTAGTA
CCTAGAGCCAAGGCGTAGAGGCAGAGCAGTACCAAGGCGAAAGCAGGGGAGGATCGGGACTTGTGATGAGTCCGCGTC--
---------------GTCGGCGACGTGCGGGACCTCACAGGCGCTTGTCGTCCCGGAG-----CTGGATCACTGCTAACT
CTGGTGAGAAC----------------------TTCGTTTCGTTTCCGTTGTGCCCTAGCGTCCGGAGGAATTAGTCTAT
GAACTCCATGATAAATTAAAGACTTTATTATCAGTCATCACAAGCATGTGAATCTCCAATTTGGAGCATG-----CATGG
GGCTGCAATACGCATATAACTTTCG--------------------------------------ATGGTACCGTCACTTCT
GTAGAACCCGTCTACGTTGCATTCCATGATGAAGAGTGGGGAGTGCCGGTTCACGATGACCGTAAGCTGTTTGAGCTGCT
TACCTTATCACAAGCCTTGGCCGAGCTCTCCTGGCCTGTAATTTTGAGCAAACGGGAGGAGGTCAGGAAGATGATTGATG
CTTTCTACAATGCGTCCGTGCCTGACTGCACGAACAAGAAGATAAACCAGTTGTTCAAGTCAAATGGAAGCACGTTGTTG
TCAGAGCAAAAGATGCGAGCTATGGTCGCAAACGCCAAGCAAATTCAAAAGGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr4B_2328
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TATCGCCGATGTCTATCTGC
AGGTAGTCCGTGAATTCGGGTCGTTCAGCAACTACTGCTGGAGCTTCGTGAACCACAGGCCCATCACAAACGGCTTCCGC
TACGCTCGCCAGGTGCCCACCAAGACGCCCAAATCTGAGGCTATGAGCAAGGACCTGATGTGCCGAGGGTTCCGGTGCGT
CGGCCCCACGACGGTCTACTCGTTCATGCAGGTCGCCGGGATCGTCAACGACCATCTGCTGTGCTGCTTCAGGTTTGATC
AGGTTGGCGGCCAGCCAAAGGCTGCCGTGGAGAATGGTTCAC--------------------------------------
--GATCAGCGAGGTGTAGTTAGCCTATGACTCTTGCCTTGTATTGTACTGTATCTG----------------ATAGGTGT
GCTCATGTTGTATTTGGCCTTC-GTCGGATATGACAGTTAGTTTTGCAGTGCTTGTTTGTGTGGTGTGACTGGTGTCTGG
TGACTTGTAGCGTG----CATTGTGGATTGTACAAATTG-TGGAACTGTGTGCATGGTCGATCAAGGTGTGGTTTGCTTT
CTTCATTTCATGTAACGCATCTGTATTCGGGAGTGTAAAATTGGTTCGCCACCATGTATATAGAC---------------
--------------TGCAGTGAGCGGTGTGGTGGGTTTTTTTGTTTTTTTTTTTTTGAATTTTTGCATCTATGTACAACA
GTACAAACAATGCTATATAATTTGTATCGGCCGGCAAATGTCCAATTTCAAGGTTGTACTTTTGTCTGCAGAATATAGCG
TGTGCGTTTGTTATTGGTTTAGACAACACACGGAGTGTTGTGTTGG-----------------------GTCGACATGGC
AACGAACAATTCGTCAGCCCTTATGTCACACACTTGCCTTGTATGGCAAAATCACAAGATAAAGTTTGTTCCCTAGAGAA
GTGAGCCCCTAAACAAACAAGCTAACCGTACCAACAAGAAAGTTCCACCACCTTTCG----TCCATTCATCAAGC----T
GTTGTTAATTAGGCAACTAGAGTGACTAAGAAACACGTC----CCTAAACTAATCACGACACGATGGCCACGTTTCGCCT
CGCCATGGCCGTGATCTCCTTCCTTAAACCTCTCTCGCACATAAACCCTTTCTTTAACCATACACTTGGGGTTAGTGAGT
ATTAAACATTGGAATCAAATCATTTCGCCAAAACAAAAGCCTACCACACCCCTCGAGGGCGGCATCCTCGGTATGCGCGA
GCCCGGGTCACTCGCTCCGCTCACACGGTCCGTGCGCCTTCCAC-GCACGTGTCGCTCTCCGGGTCAGCCAGGTCAGCAG
ACACGAGCCCACGTCATCGACACGCAATGCC-AGGGGAGCACTTGTGTGAGCCTTGCGGTGTGGCCGAAGCTAAAGCCCA
CAAAGTTAACGAGTTTGTTTACATTAGCGTTAATGAGGCTTTGTCCGGATGTTTCCCGGCGCGCTGG
>SNPs
------------S---------------S--------------S--------------------------S---------
----S--------------S------S----------------------------------------------------S
----------S-----------------------------------------------------------S-S----S--
-S-SS-SSSSS---------------S----------------------------S------------------------
-S-------------------S--------S-SS--------S----S--------------------------------
--------------------------S----S-SS--------------------------------S------------
----------------------S-------------------------------------------------S-------
----SS------------------------------------------------------S-----SS-----SSSSSS-
----------------------------------------------S--------------------------------S
-------------------------------------S------------------------------------------
----------------------------------------S----------S----------------------------
----------------S-----------SS-----S--S------SSS-SSSSSSSSSSSS--S----------------
------S--S----------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------S-----------------S--S------------S-----------
-----------------S----------------S--------------------------------S---------S--
-----------------S--S------SS--SS-----------------S--------------------SS-------
-----------SSSS-------S----S----------------------------------------------------
---------------------------------------S----S-----------------------------------
-----------------S--SSSS-----S--S------------------------------------------S----
---------------SSS-SS-----------------------------------------------------------
--------------------------------------------S---------S-------------------------
--------------------------------------------------------S---S-------------------
-------------------S------SS--S--S------------------------------------S------S--
------------S----------------------------S-------------S-------------------S--S-
---S-S--------S---SS--S--SS----S------SS--SS-S-SSS-----------S-S-S-SSS----------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
S----------S--------------------S-----S-------S----------------S----------------
--------S---------------------------------S------------S------------------------
--------------------------------------------------------------------------------
---------------S-------------S-----------SSSSSSS-SSSSSS-SS-----------S-------S--
----------S-----------S---SS-------------------------S-----S-------SSSSSS--SSSS-
SSSSS-SSSS-------------------------------------------S-SSS---------------------S
---------------S-------S----------------SSSS-S----------------------------------
---------------------------------------------------------------------------S----
S-------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-----S---------------S------------------------S---------S-S--S-S--S-------------
-------------------------S--------------SS------SSSSSS-SSSSSSSSSSSSSSSSS--------
-----------------------------------------------S----------------S--------------S
-------------SS--------S--S-----S--------------------------------------S--------
----------------------S---------------------------------------------------------
----------------------------------SS------------------------S-S-S---------------
---------S---------------------------------S------------------------------------
----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSS-----------
--------------------------------------------------------------------------------
-S-------------------------------------------------------SSSS-------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--S------------------------------------------------------------------------S----
-------------------S--------S-S-----------------------------------------S-----S-
---S-----------S-------SSS-SS--S------------------S--------------------S--------
-----------S-------------------------------------------------------
>forward_85
-----------------------------------------------------------------ATTCCTAGTCATGCC
TCGCG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_2433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CCACCCCCTCAATAGAAGCC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>forward_1871
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GCATCCGTCTGTGACCTCAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_3828
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTGTCGACATGGC
AACGATG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
