>input_sequence_45408
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-----ATGGCGGCCGAGGACCAGATCCCGCGAGCGCAAGCCAACCCCGAGAAGACCAAGAAGCGGAAGAAGCCCAAGAAG
GACAAGTGGGGCCAGCCCATCGCCGCAGCGGCCGATGAGCCGGCCGTCGAGCAGGTGCAGGAGCAAGAGGCACCTGAGGA
GCCTGCCGTAACGGCGGCGGCGGGGGCGGAGGGGGTCGGGGAGGGAGCGGAGAGCTATGAGCGCGGCAAGGTGGTGGCGA
GCGGCATGCCGTACACGACCACCGAGGAAGAGATCCGGGAGCTGTTCGACCGGTTCGGCCCCATCCGCTCCCTCCAGCTC
TCCCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCCTTCGTCACCTTCGAGGTTACTACTGAATTTATACTGCTATT
TTGTTT----------GTTATATGCCGTAGTACTCCCTCCGTCCGGAAATAATTATCATCAAAATAAATAAAAGAGGATG
TATCTAGACATATATTAATTCTACATACATCCCTTTTTATCCATTTTGATGACAAGTATTTTCGGACGGAGGGAGTAATA
GTTTTTTAGCATCCA---AATCCTCTGCATTTGCTCCAAATACGGAGGTTAAGAGTCTGGCAGTTGCTCGTTTGTACCTT
AATTGACATGTTGC------AAGACAAATTGGATATGCACTTGTTCTTCAGACTATCTTGTTAACCACTTTGTATATGTC
ACACTGTCACCTTGTTCTGTCAGTTTGTTGAATGGGCTATGTACAATACAGTGGTGTGTGTGTTTGGTCC-TGTTCGATC
CCTGATCATCGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TTTTAGTTGTGGACTCCCTTTGCATGATTCGTCACCATATATGATGACCAATTGG-CAGACTGGTAAT
CATTTGACGGCATTTAAAATATTGGAATTCCTTCCATCATACAAGTGATATTCCCTTATCTTGTGACCGAGCAAATTTGC
TGTTGCTGCTCTATGCAAGAACTACAAAGTAAACTGAAGAAATTTTGTAAGTTGGAACATATAGCTAGTTGGCTTTTTAG
TTCATTTGAACAAAGCTAATTCACTCTATTATGTCATTCA-GTCCGATGAAATGAAATTGGCATGAAATCTCTGTGAGAT
CTACTAAGAACACTGAAGAAGTTTTATAAGTCAGATACATATAACTG--TTTGGCTTTTTGGTTCGTTTGAAAAAGGCTG
ATTCATTCTACTCTATTATGCCATTTCAGTCAGATGAAGTTGCCATGAAATCTCTGGAGCTTGATGGATCCAAAATGTAA
GTTTCAGCCCGTCTATTGATTTGTGTCTTACTCATGTCATCGCACAGGCGAATTCCCTTGTCACTGACACATATACTGCT
TGTTACAGTGGTAACAGGTTTATGAGGGTCGAAAGATGCAGGGTAACTGCTAGCTCGAAGAGGCAAAAGAAGACAGAGTT
CCAATCTGATCCTGAGAAGCCTGATGGCTGCCTCTCAGCTTATGTCGGCAATCTCGCATGGAACATCACCGAGAAGGACT
TGAGGGATTTCTTCAAATCATCAAGGATTGCATCAATAAGATTTGCCATCGACAATAGAACTGGAGATTCTCGTGGTTTC
TGCCATGTTGATTTCGAGGACGATGAATCGCTCGAGAAAGCTGTCGGGATGAATCAATCTGAACTGCGGGGAAGACCTGT
GAAGATAGCATATGCTATCATCAACAGGGCCTGA----------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr4B_1_TraesCS4B01G346300
GTAATAAACATTTTTGTAAAATTATGCAAGTTTTTTTTTACATTGTACAAACATTTTT-AAATGTCACAACTGTTTTGTG
CAACACGAGAATATTTCTTTAAAACGCCATGAACACTTTTTAATGGTAATAAATATTTATGCATTTTGTTTACATTGTAT
ACACATGTTTCAGAATTTTCACACACATCTTTTTGAAACGCAAGAACATGTTTCATTGGCGCGAACATTGTTTTTGAAAG
CCATCAACA--TTTTTTAGTTGTGCTAACATTATTTCACCATGTTAACATTTTCAAAGTCATGGTTTTATTTTTTCAAAT
AAATTTAAGTTTTTAAACAATGAATAAAAAGAAAAAGGAAATTAGGGCATCTATGTGTCATCAGTGTGGGAGACCCACAT
TCCTACTGGGCCAACCA----------------------------TATAAGCGAGGTATAGGCGCGCGGGCCCATCTGAT
TGGAGCAGTATTTCCTCTTCATGGCCAGCGGTCTATTCCTCCTCAT-GCCCATGTGACCCCGTTGA------CCCTAATC
ACACATGAGGTAAGAGAGAGAAAATAGAAAATGCTTAATGAAACACTAGACCATAGGAGTGTCCGAGAATGTTACAATTA
TTGACATACCGCGAGAAAAATATGCTGCACCGATAACATTCAGGAAACCATTTAGCAGGAAACTTGTATGCTGCAATGTC
GGATGTTTGAGATCTTATGTCTAAATAAGATCAGACGATGAATGTTGATATTTTTTTCCATAAATTTGGTCAAACGTGAG
AAAGTTTAACGGAAGGCAAGCCGAACATGTTAATGAATTGAAGTTACCGTAGTGATAGTGTCACCCGGAAAAAAAAACCG
CAGTGATAGTGATTGTTTTAGTTAGACAGCTTAAACCCAATAGAGGGTGGAGATTTCATCTCCTGCCGTGCTGCCGCGGA
----CACTACCCTGTCCAGCAAACGCACTTGTTTCGGCGGCGGCGGCG---CGAAGACAGAGCCGGAAGAATTAGGGTTT
AAGCCATGGCGGCCGAGGACCAGATCCCGCGAGCGCAAGCCAACCCCGAGAAGACCAAGAAGCGGAAGAAGCCCAAGAAG
GACAAGTGGGGCCAGCCCATCGCCGCAGCGGCCGATGAGCCGGCCGTCGAGCAGGTGCAGGAGCAAGAGGCACCTGAGGA
GCCTGCCGTAACGGCGGCGGCGGGGGCGGAGGGGGTCGGGGAGGGAGCGGAGAGCTATGAGCGCGGCAAGGTGGTGGCGA
GCGGCATGCCGTACACGACCACCGAGGAAGAGATCCGGGAGCTGTTCGACCGGTTCGGCCCCATCCGCTCCCTCCAGCTC
TCCCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCCTTCGTCACCTTCGAGGTTACTACTGAATTTATACTGCTATT
TTGTTT----------GTTATATGCCGTAGTACTCCCTCCGTCCGGAAATAATTATCATCAAAATAAATAAAAGAGGATG
TATCTAGACATATATTAATTCTACATACATCCCTTTTTATCCATTTTGATGACAAGTATTTTCGGACGGAGGGAGTAATA
GTTTTTTAGCATCCA---AATCCTCTGCATTTGCTCCAAATACGGAGGTTAAGAGTCTGGCAGTTGCTCGTTTGTACCTT
AATTGACATGTTGC------AAGACAAATTGGATATGCACTTGTTCTTCAGACTATCTTGTTAACCACTTTGTATATGTC
ACACTGTCACCTTGTTCTGTCAGTTTGTTGAATGGGCTATGTACAATACAGTGGTGTGTGTGTTTGGTCC-TGTTCGATC
CCTGATCATCGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TTTTAGTTGTGGACTCCCTTTGCATGATTCGTCACCATATATGATGACCAATTGG-CAGACTGGTAAT
CATTTGACGGCATTTAAAATATTGGAATTCCTTCCATCATACAAGTGATATTCCCTTATCTTGTGACCGAGCAAATTTGC
TGTTGCTGCTCTATGCAAGAACTACAAAGTAAACTGAAGAAATTTTGTAAGTTGGAACATATAGCTAGTTGGCTTTTTAG
TTCATTTGAACAAAGCTAATTCACTCTATTATGTCATTCA-GTCCGATGAAATGAAATTGGCATGAAATCTCTGTGAGAT
CTACTAAGAACACTGAAGAAGTTTTATAAGTCAGATACATATAACTG--TTTGGCTTTTTGGTTCGTTTGAAAAAGGCTG
ATTCATTCTACTCTATTATGCCATTTCAGTCAGATGAAGTTGCCATGAAATCTCTGGAGCTTGATGGATCCAAAATGTAA
GTTTCAGCCCGTCTATTGATTTGTGTCTTACTCATGTCATCGCACAGGCGAATTCCCTTGTCACTGACACATATACTGCT
TGTTACAGTGGTAACAGGTTTATGAGGGTCGAAAGATGCAGGGTAACTGCTAGCTCGAAGAGGCAAAAGAAGACAGAGTT
CCAATCTGATCCTGAGAAGCCTGATGGCTGCCTCTCAGCTTATGTCGGCAATCTCGCATGGAACATCACCGAGAAGGACT
TGAGGGATTTCTTCAAATCATCAAGGATTGCATCAATAAGATTTGCCATCGACAATAGAACTGGAGATTCTCGTGGTTTC
TGCCATGTTGATTTCGAGGACGATGAATCGCTCGAGAAAGCTGTCGGGATGAATCAATCTGAACTGCGGGGAAGACCTGT
GAAGATAGCATATGCTATCATCAACAGGGCCTGAAGGCTGGCTAGCTGGTGCTCAACGTTTAGCATTATTGGGCTAGTGA
GATTCAGTTGTAAGGTCTTGCCCCCTTCACTGTTTCCATTATGTTTCTATAGACCAAACATGCCAT--------------
----ATATTGGCCAGAAGTAATGATCGTGTAACAAATACTTTTGGGCTGCATCTTATCAATCTATCTTAAAAATCATGCT
GCTCGTTG-TTCTGTCCAGCACAGTTTCAATGGCTTTGTAGGAGAGTTGTGTAAACCTGTCTGTCTTATGTTTGTATGAG
AAAACCTATGTCTGCACATCCTCTTAACATGTACT---------------------------------------------
-----------------------------------------------ACCTTTTAGCAGGGGATGTCTGTAGAGCAGGGG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
ATGATGTTTTTCGGTTATTGTTGAGAGTATATCTCTGATGCTCCACTTTGACAATACCTGTAACCATTCATGTAGGAGGC
ATATCGTGTCAACAAGGATTGTTCAGTATAGGATTAACTTATTAAGTAGGGTCATGTTGGTTATGCTATATTTATCCTGG
CGGTCCTAGTGTAGGAAAGAAAATTAGGCAAGTGCATTGGAGACCACTGTCGCCTTTTTTCAGTCTGTTCATGGATCATG
AAGCTAAGAACTACTCCCTCTGTAAAGAAATATAAGAGCGTTTAGATTATTAAAGTAGTAATCTAAACGCTCTTATATTT
CTTTACAGAGGGAGTATATATGCATTTGAGGTGATCAGTTTGCGTGTTATTGTGAGCGCCTAAAGGGGCTGATGACTAAA
AAGGAAGAGGTGCTCAGCATTTAGCATTAGCCTGCTACGGAGCTTCAGTATTCTGACTCCAGTGTTTGGTTTTGGCCCCC
TCCACGGTGATGCTTTGTTCACCAAATGTAATGCTTGTGTTTCAAACAATTGGTGGCTACATTTTTACAGGTCTATCAAC
CTTCTCTGCTCGCCGTTTAAAGTCTAGCTGATACACCACGCTGTTCATGTTCAGCATGGTTGCGACGACTTAAAGTTTGC
ACAGCTGCTGAAATGCTTTTCTTT
>chr4D_1
GTAATAAACA-TTTTGTAAAACTATGCAAG--TTTTTTTACATTGTACAAACATTTTTTAAATGTCACAT-TGTTTTGTG
CAACACGAGAATATTTCTTTAAAATATCGTGCACACTTTTTAATGGTAAGAAATATTTATGCATTTT-TTTACATTGTAT
ACACATGTTTCAGAAATTTCACACATAGCTTTTTGAAACGCAGGAACGTTTTTCATTGTCGCCAACATTGTTTTTGAAAG
CTATCAAGATTTTTTTTAGTTGTGCTAACATTTTTTTACCGTGTTAACATTTTCAAATTCATGGTTTTATTTTAA-AAAT
AAATTGAACTTTTTAAACTATATAAAAAAGAAAAAGA-AAATTAGGACGTCAACATGTCATCAGTGTGGGAGACC-----
-CCTACTGGGCCAACCCAACCCCTACGCGGCTGCCTTCCACTTGCTATAAGCGAGGCATAGGCGCGCGGGCCCATCTGAT
CGAAGGAGTATTTCTTCAGGAAGAGGCAA-------TCCTCCTCATGGCCCATGTGACCCCGTTGAACCTGGCCCTAATG
ACACCTGAGGTATGAGA---AAAATAGAAAATGCTTAATGAAACACCAGACCATAAGAGTGTCCGAGAATGTTACAATTA
TTGACATACCGCGAGAAAAATATGCTGCACCGATAACATTCAGGAAACCATTCAGCAGGAAACTTGTATGCTGCAATGTC
AGGGGTTCGAGATCTTACGTCTAAATGAGATCAGACGACGAATGTTGATATTTTTTTTTATAAATTTGGTCAAACGTGAG
AAGGTTTAACGGAAGGCAAGCCGAATATGTTAATGAAATGAAGTTACCATAGTGATAGTGTCACCCGAAAAAAAAAA-CG
CAGTGATAGTGATTGTTTTAGTTAGACAGCTTAAACTCAATAGACGGTGGAGATTTCATCTCCTGCCGCACTGCCGCGGA
CC------ACCCTGTCCAGCAAAAGCACTTCTTTCGGCGGCGGCGGCG---CGAAGGCAAAGCCGGAAGAATTAGGGTTT
AAGCCATGGCGGCCGAGGACCAGATCCCGCGAGCGCAAGCCAACCCCGAGAAGACCAAGAAGCGGAAGAAGCCCAAGAAG
GACAAGTGGGGGCAGCCCATCGCCGCCGCGGCCGACGAGCCGGCCGTCGAGCAGGTGCAGGAGCAAGAGGCACCTGAGGA
GCCTGTCGCA---GCGGCGGCGGCGGCGGCGGAGGGTGGGGAGGGCGCGGAGAGCTATGAGCGCGGCAAGGTGGTGGCGA
GCGGCATGCCGTACACGACCACCGAGGAAGAGATCCGGGAGCTGTTCGACCAGTTCGGCCCCATCCGCTCCCTCCAGCTC
TCCCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCCTTCGTCACCTTCGAGGTTACTACTGAACTTATTCTGCTATC
TTGTTGTAGAATCGTCTT--------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TCTGTATTTGCTCCTGGTACAAAGGTTAAGAAAGTACCAGTAGCTTGTTTGTACCTT
AATCAACATGTTGT------AAGACAAATTGGATATTGCAC--TTGTTGGCACTACCCTGCTAACCATTTTGTTTATGCC
ACACTGTCACCTTATTCTGTCAGTTTGTTGAATGGGCTATGTACAATACAGTGGTGTATGTGTTTGC-CCGTGTTCGATC
CCTGATCCTCAA--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TTTTAGTTGTGGACTCCCTTTGCATGATTCGTCACCATATATGATTACCAATT-G-CAGACTGGTAAT
CATTTGACGGCATTTAAAATTTTGGAATTCCTTCCATCATACAAGTGATATTCCCTTATCTTGTTATCGAGCAAATTTGC
TGTTGCTGCTCTATGCAAGTACTACAAAGTAAACTGAAGACGTTTTAGAATTTGGAACATGTAATTAGTTGGCTTCTTAG
TTCGTTTAACTAAAGCTACTTCACTGTATTATGTCATTTACGTCAGATGAAATGAATTTACCATGAAATCTCTGTGAGAT
CTACTAAGAAAACTGAAGAAGTTTTAGAAGTCAGAAACAGATAACTAG--TTGGCTTTTTAGTTCGTTTGAACAAGGCTG
ATTCATTCTGCTTTATTATGTCATTTCAGTCAGATGAAGTTGCCATGAAATCTCTGGAGCTTGATGGATCCAAAATGTAA
GTTTCAGTCTGACTATTGATTTGTGTCTTACTCATGTCATCGCACAGGTGAATTCCCTTGTCACTGACACATATACTGCT
TG-TACAGCGGTAACAGGTTTATGAGGGTCGAAAGATGCAGGGTAACTGCTAGCTCGAAGAGGCAAAAGAAGACAGAGTT
CCAATCCGATCCTGAGAAGCCTGATGGCTGCCTCTCAGCTTATGTCGGCAATCTCTCATGGAACATCACCGAGAAGGACT
TGAGGGATTTCTTCAAATCATCAAGGATTGCATCAATAAGATTTGCCATCGACAATCGAACCGGAGATTCTCGTGGTTTC
TGCCATGTTGATTTCGAGGACGATGAATCGCTCGAGAAAGCTGTTGGGATGAATCAATCTGAACTGCGGGGAAGACCTGT
GAAGATAGCGTATGCTATCATCAACAGGGCTTGAAGGCTGGCTAGCTGGTGCTCAACATTTCGCATTATTGAGCTAGTGA
GATTCAGTTGTAAGGTCTTGCCCCCTTCACTGTTTCCATTATGTTTCTATAGACCAAACATGCCAT--------------
----ATATTGGCCAGAAGTAATGATCGTGTAACAAATACTTTTGGGCTGCATCTTATCAATCTATCTTAAAAATCATGCT
GCTCGTTG-TTCTGTCCAGCACAGTTGCAATGGCTTTGTAGTAGAGTTGTGTAAACCTGTCTGTCTTATGTTTGTATGAG
AAAACCTATGTCTGCACATCCTCTTAACATGTACTCCCTTCGTCCCAAAATAAGTGTCTTAACCTTAGTACAACTTTGTA
CTAGAGTTAGTACAAAGTTGAGACACTTATTTTGGGACGGAGGGAGTACCTTTTAGCAGGGGATGTCTGTAGAGCGGAAG
AGCGGAACCGGATTCTCTAACATTGTGAAGGAAAGTCATGGTGCTACAGTGTTTGTCTAGTGTAAAATGAAGAAGAAAAG
TTAGGGACTGTTAGTAGGTAGGTTGTTTACTGTTGGTATTTACTGTAAATATAAATAATTTAAAATTAATTTTATGTCAC
CGTCAATTTGTTTGTATGTAATTACTATAAATGTACACAATAGATCATCAATTTGTAAATTAATTTAAGTCATTTTAGCC
ATAATCATATGGATAGAAAGAAGGAAGTTAGGGTATTGTAGCTTCTCTAACTTTCCTTCTCAATGTTAGAGGATCCGGTT
ATGATGTTTTTCGGTTATTGTTGAGAGTTTATCTCTGATGCTCCACTTTGACAATACCTGTAACCATTCATGTAGGGGGC
ATATCGTGTCAACAAGGATTATTCAGTATAGGATTAACTTATTAAGTAGGGTCATGCTGGTTATGCTATATTTATCCTGG
TGGTCCTAGTATAGGAAAGAAAATAAGGCAAGTGCATTGGAGACCACTGTCACCTTTTTTCAGTCTGTTCGTGGATCAAG
AAGCTAAGAACTACTCCCTCTGTAAAGAAATATAAGAGCGTTTAGATCACTACTTTAATAATCTAAACACTCGTATATTT
CTTTACGGAGGGATTATATATGCATTTGAGGTGATCAGTTTGCGTGTTATTGTGAGGGCCTAAAGGGGCTGATGACTAAA
AAGGAAGAGGTGCTCGGCGTTTAGCATTAGTCTGCTACGGAGCTTCAGTATTCTGACTTCAGTGTTTGGTTTTGGCCCCC
TCCACGGTGATGTTTTGTTCACCAAATGTAATGCTTGTGTTTCAAACAATTGGTGGCTACATTTTTACAAGTCTATCAAC
GTTCTCTGCTCGCCGTTTAAAGTCTAGCTGATACACCACGCTGTTCATGTTCAGCATGGTTGCGACGACTTAAAGTTTGC
ACAGCTGCTGAAATGCTTTTCTTT
>chr5A_844
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-AGTGATGGTGATTATCTTAGTTGG-CAGCTTAAACGCAATAGACGGCTGGGATTTCATCTCCTGCCCTGCTGCCGCGGA
TTACCACTACCCTGTCCAGCAAAAGCACTTCTTTCGGCGGCGGCGGCGGCGCGAAGGCAGAGCCTGAAGGATTAGGGTTT
AAGCCATGGCGGCCGAGGACCAGATCCCGCGAGCGCAAGCCAACCCCGAGAAGACTAAGAAGCGGAAGAAGCCCAAGAAG
GACAAGTGGGGGCAGCCCATCGCCGCCGCGGCCGACGAGCCGGCCGTCGAGCAGGTGCAGGAGCAAGAGGCACCCGAGGA
GCCTGTCGCA---------GCGGCGGCGGCGGAGGTCGGGGAGGGCGCTGAGAGCTATGAGCGCGGCAAGGTGGTGGCGA
GCGGCATGCCGTACACGACCACCGAGGAAGAGATCCGGGAGCTGTTCGACCAGTTCGGCCCCATCCGCTCCCTCCAGCTC
TCCCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCCTTCGTCACCTTCGAGGTTACTACTTAACTTATTCTGCTATC
TTGTTTCACTTTGTTTGTTGTATGCCGCCGTAGCAATAA-----------------------------------------
--------------------------------------------------------------------------------
----TTTAGCATCCATATAATCCTCTGTATTTGCTCCAAGTACAGAGGTTGAGAGACTGGCAATGGCTCGTTTGTACCTG
AATCTGCATGTTTGTACAGTAAGAAAATTTGGATATTGCAC--TTGTTGGCACTACCCTGCTAACCATTTTGTG--TGTC
ACACTGTCACCTGATTCTTTCAGTTTGTTGAATGGGCTATGTACATTACAGTGGTGTATGTGTTTGGTCAGTGTTCAACC
ACTGATCTTTAATTTTAGTTGCGGAACTACTGAGCAGCCGACACCCACTGGCCGAACATTGGACGATGCTTTGATCCAGC
GGTCGGCCTCCTCTTTGTGCCATGCATGTACGGTCAGATCAGTAGTATCGTCCAGACATCGGCTGCACACCGTCGTGTGT
ATAGCAGCGCTCTTTTAGTTGTGGACTCCCTTTGCATGATTCGTCACAATATATGATGACCAATTGGCCAGACTGATAAT
GATTTGACGGCATTTACAATTTTGGAATTCCTAACATCATACAACTGCTATTCCCTTATCTCGTTATGGAGCAAATTAGC
TGTTGCTGCTCTATGCGAGAACTAGTAAGGAAACTGAAGAAATTTTAGAAGTTGGAACATATAGCTAGTTGGCTTTTTAG
TTCATTTGAACAAAGCTAATTCACTCTATTATGCCATTCA-GTCAGATGAAATG-ATTTGCCATGAAATCTCGGTGAGAT
CTACTAAGAAAACGGAAGAAGTTTTAGAAGTCAGAAACATATAATTATATTTGGCTTTTTAGTTTATTTGAACAAGGCTG
ATTCATTCTACTCTATTATGTCATTTCAGTCAGATGAAGTTGCCGTGAAATCTCTGGAGCTTGATGGATACAAAATGTAA
GTTTGAGCCTGTGTATTCATTTGTCTTCAACTCATGTCAGTGCACAGGTGAATTCCCTTGTTACTGATGCGAATACTGCT
TC-TACAGTGGTAACAGGTTTATGAGGGTCGAAAGATGCAGGATAACTGCTAGCTCGAAGAGGCAAAAGAAGACAGAGTT
TGAATCTGATCCTGAGAAGCCTGATGGCTGCCTCTCGGCTTATGTCGGCAATCTCTCATGGAACATCACCGAGAAGGACT
TGAGAGATTTCTTCAAATCATCAAGGATTGCATCAATAAGATTTGCCATCGACAAGAGAACTGGAGATTCTCGCGGTTTC
TGCCATGTTGATTTCGAGGATGACGAATCACTCGAGAAAGCTGTAGGGATGAATCAATCTGAACTGAGGGGCAGACCTGT
GAAGATAGCGTATGCTATCATCAACAGGGCCTGAAGGCTGGCTAGCTGATGCTCAACGTTTAGCATTATTGGGCTAGTGA
GATTCAGCTGTAAGGTCTTGCCCCCTTCACTGTTTCCATTATGTTTCTATAGACCAAACACACCATGATGTTTGTGTATT
CCAGATATTGGCCAGATGTGATGACCGTGTAACAGATACTTTCAGGCTGCATCTTATCAATCTATCTTAAAAATCATGCT
GCACATTGTTTGTGTCCAGCACAGTTGCAGCGGCTTTGTAGCAGAGTTGTGGAAACCTGTCTGTCTTATGTTTGTATGAA
AAAACCTCTGTCTGCAAATCTTTTCAACATGTACTTG-------------------------------------------
----------------------------------------------------TTCGCAGAGGATGTCTGTAG--------
--------------------------------------------------------------------------------
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------------------------
>SNPs
----------S----------S--------SS-------------------------------------SS---------
------------------------SSS-S--S-----------------S-----------------S------------
---------------S---------S-S--------------S----S-S--------S---S-----------------
-S-----S------------------------S---S---S----------------S---------------SSS----
-----S--S---------S--SS-S----SS----SSS--------S-S--S-SS--------------------SSSSS
S---------------S---------------------------------------S-----------------------
S-S--S--------S--SSS-S-SSSSSSSSSSSSS-------------------------------------------S
----S-------S----SSS--------------------------S--------S------------------------
----------------------------------------------------S---------------------------
S-SS---S---------S--------S-----------S------------------SS---------------------
--S----------------------S-----------S----------S------------------S---------S--
------------------------------------S-------S-----------------------------------
-----------------------S------S-------------------------S-----------------------
--------------------------------------------------------------------------------
-----------S--------------S--------S--------------------------------------------
-----S--S-SSS----------S-----S--S------------S----------------------------------
---------------------------------------------------S----------------------------
------------------------------------------------------------------S----S-------S
-------------------S-------SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-----------------------S-----------S---S-----------S--------S---------------
---SS--------S----------------------SSSSSSS--S--SSS----S-S--S------S-----S------
-------------S-------------------------------------------S----------------------
-------S--S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------------------------------------S-S-------------
----------------------------------------------SS--------------------------------
--------------------------------------------S-----------S---S-------------------
----------S---------------S--------S----------S-------------S-----------S-------
--------------------S-----------------------------------------------------------
---------S--------------------------------------S-------------------------------
--S-----------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S--------------S--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S-SS-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-----------------------------------------------S---
--------------------S-----------------------------------S-----------------------
S---------S-------------S--------------------------S------------------S-------S-
-----------------------------------------------S-S--SSS--S----------S---S-------
------S------S------------------------------------------S-----------------------
---------------S--S-----------S---------------------------S---------------------
------------S--------------------------------------------------------S----------
S-------------------------------------------------------------------------------
------------------------
>forward_516
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CTTCATGGCCAGCGGTCTAT--------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>reverse_1656
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------TCTGGCAGTTGCTCGTTTGT-----
--------------------------------------------------------------------------------
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------------------------
>forward_1490
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------TACTCCCTCCGTCCGGAAAT------------------------------
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------------------------
>reverse_3865
--------------------------------------------------------------------------------
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------------------------TAGGCAAGTGCATTGGAGACC-----------------------------------
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------------------------
