>input_sequence_45347
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----------------------------------------ATGGCGTCCACCTCCGCCTCCCTCGGCGCCATCCTCCAGC
GCTTCCCGCTGCTCGCGCCCCGCCCCGCCTCCCGCCGCGCGCCCACCGCCCGCCGCGCCGTCGCCAACAAGATCTCCTGC
ATCGGATGGGTACGTACCAGTACCACGTCTCTCCATCTCTCGGCCCAACTGGCTGCCCGGTGG----TGACTGACTGACG
CGCTCGGTTTGGGACGCTCGCAGGACCCGGAGGGCATCCTGGCGCCGCCGCAGCCGGGCCACATCGCGCGCCTCGAGTTC
CGGCGCCGCCTCGACAGCGACGCCGACGCGCGCGCCGCCTTCGACCTCCAGGTCAAGGAGGAGCAGGAGCGCCGCCGCAA
GGAGCGCGAGGTACTGCAATTCATTCATCCATTGCCATTCCGTCCGTCGAGCACGTCCTGTG-----GCCGGGCTGAGCT
AAGACCTCCTGACACG--------------GCGTGGGTGCAGGCGCGGGTGATACCTGAGACGGACGCCGGGCTGGTGGA
GTTCTTCCTGGACACGGACGCGCGGGAGATCGAGATCGAGATCGGCAGGCTCCGGCCCAGGCTCAACAAGGGCTTCTTCG
ACCACATCCAGCGCGAGATCGCGCAGATCAAGTTCGCAGTCACCAGAACAGCGGTCTGTACTGCCAACTTGAACTTGTGC
TC--CCTGC---TTCCTCTGCTCTTGAGTGTGCGGTAAAATTTGTTCCAACTGATAAATTCCAGCCTGATTTTGGTTTCC
TCTGTGTGCGCGCTCGCAGGCAAATGAAGACAGACTGATCGAGCTGGAGGCGATGCAGAAGGTCATCGGGGAGGGAGTCG
GTCAGTGAACAAAATCTTAGCTCTATTAAACCATGGGAAATTTTACGGTACATCATACTACTCAACATAACGGGTAGTAT
TAAGTTAATCTAATGGTCAGCATGAGACCGTCAGATTTTAACTTAAGGACATATTGGTAATTATG---------------
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------------------------------------------------AACGAGTGTGGGATGGAGAATTACCGCGTGAG
ATTTCAGGGGAAGGTGTCTGCGGGATGGATACATTTGAACTACCCAAAACGCCCTTAATTACTTAATATACTACCGAAAA
TCTAGTGTAGTATCTGCTCATCTGGGCCATTGAACTAAAAAAATAAACGGTCCAAATTAATCTGATGTACCGTAAAAAGT
CTCACTAAACCATCTC---AATGATCCAAGCTAGGTAGATAACTTC----------TCTGTATCTGTAACTGTTGCCCTT
GCTGATGATGCAGAGGCCTACGACAAGCTGCAAAACGACCTGGTCACGGCCAAGGAGCGGCTCACCAACATCCTGCAATC
CAAAGATAGGAAGAAAACTGTAAGATCTGAAACAACAAGAGCTCAAA--AATGCCG-TCACTAGTCTG-----------G
TATGAACCTGCTGAGTTTTT-GTAATTGTGAATTGCTCTTGCGCAGCTGCTCGACATGGTTGAACGGAACGAGCTCAACA
TGTCCATATTAACGCTTCTCGACGAGAACATAGCGAGCGCCAAGACCAGTAACCAGGTGATGTGCTGCCCCTGGCCTCTA
TAAGGAATGAGAACCGGATAAATTAGCAATGCTTTGGATCTTTGATCGTGTGCTTCTTTTGCTACTATTTATTCTAAACC
TGTGTGTTTGTGTTTACTTTTCAGGAGGAGGCCGTGGCTTTCATGGAGGATGTGCGCTCATCTATGCTGAAATACATAAC
AGTATAA-------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chr2B_1_TraesCS2B01G050600
GCTAAGTATAGTCTTGACAATAGATCAGATGGTATTCTTGTTAATGATGTTCCACCCTGTGTGGTGAATTTTGTAACGAG
TGATTGTAATAACTATCTTGGTTAATTAATATATGTGGTGGTTTAAAAAAAAAGCTCTTGGTTCCTCAAAAAAGAGTTCA
AGCTCTCAATTATTTTTGGGAAAGCTTAATAATGCACTATATCTCTTGCCTAAGTTTTGTGCTTATGGTGGTGGGGTGGG
CTGTGTGTTCAAAAGGGCAAAAAGAAAACTAAAAGTTCTAAATTTGTAGAAGTTTAAAAAATCTCAAAAGTTCAAATGTT
GGAAAGTCTTAAACCTTAGAAGTCCGTACTCCCTCCGGTCCTTTTTAGTCTGCATATAAGTTTTATCCGAAGTCAAATTA
TCTCTACTTCGATCAAACTTATAGAAGAAAGTATCAACATTCACAATGCCAACTCAATATTTTTAGATTCGTTATGAAAT
GCAGTTTCATAGTACATACATTTGATATTGTGGGTGTTGATATTTTCTTAATATGAATTTGGTCAAACTTTGTGGTGATT
GACTTGCCACAAATCTAATATGCGGAGTAAAAAGGACCGGAGGGAGTACTTCGAAATTTCAAGCTTTGGAAATTTCGCAA
AAGATTAAATTTTGTTCTGAACAATGTTGAGAGTTTGAAATCTTGCCATTTTCAATGTGGATTGATGAACGATGTCGGTG
CCGTTCTTCTATGACAGTTCTTCTATGGATGTTCACCAAATAGGGAAATTGTTTGGAATTTATTTATTTGTTTTAAACCC
AAAAACGGGAAAGTAGACGGGCCGGCCCGTTGGGCCATCCGAAAGCCATATTGTTGTGGTACTAGTACTATAATCTTATC
GTTAGCATCCTTGCTCCATCCATCGTACGGTACACTCGTACCAATCAGCGTTAGCGCGAAGGGATAACGTCCGTCCGTTC
CATCCTCGCGCGCGCGGCCGCTCCGGCTCCGGCTCCGGCCATGGCGTCCACCTCCGCCTCCCTCGGCGCCATCCTCCAGC
GCTTCCCGCTGCTCGCGCCCCGCCCCGCCTCCCGCCGCGCGCCCACCGCCCGCCGCGCCGTCGCCAACAAGATCTCCTGC
ATCGGATGGGTACGTACCAGTACCACGTCTCTCCATCTCTCGGCCCAACTGGCTGCCCGGTGG----TGACTGACTGACG
CGCTCGGTTTGGGACGCTCGCAGGACCCGGAGGGCATCCTGGCGCCGCCGCAGCCGGGCCACATCGCGCGCCTCGAGTTC
CGGCGCCGCCTCGACAGCGACGCCGACGCGCGCGCCGCCTTCGACCTCCAGGTCAAGGAGGAGCAGGAGCGCCGCCGCAA
GGAGCGCGAGGTACTGCAATTCATTCATCCATTGCCATTCCGTCCGTCGAGCACGTCCTGTG-----GCCGGGCTGAGCT
AAGACCTCCTGACACG--------------GCGTGGGTGCAGGCGCGGGTGATACCTGAGACGGACGCCGGGCTGGTGGA
GTTCTTCCTGGACACGGACGCGCGGGAGATCGAGATCGAGATCGGCAGGCTCCGGCCCAGGCTCAACAAGGGCTTCTTCG
ACCACATCCAGCGCGAGATCGCGCAGATCAAGTTCGCAGTCACCAGAACAGCGGTCTGTACTGCCAACTTGAACTTGTGC
TC--CCTGC---TTCCTCTGCTCTTGAGTGTGCGGTAAAATTTGTTCCAACTGATAAATTCCAGCCTGATTTTGGTTTCC
TCTGTGTGCGCGCTCGCAGGCAAATGAAGACAGACTGATCGAGCTGGAGGCGATGCAGAAGGTCATCGGGGAGGGAGTCG
GTCAGTGAACAAAATCTTAGCTCTATTAAACCATGGGAAATTTTACGGTACATCATACTACTCAACATAACGGGTAGTAT
TAAGTTAATCTAATGGTCAGCATGAGACCGTCAGATTTTAACTTAAGGACATATTGGTAATTATG---------------
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------------------------------------------------AACGAGTGTGGGATGGAGAATTACCGCGTGAG
ATTTCAGGGGAAGGTGTCTGCGGGATGGATACATTTGAACTACCCAAAACGCCCTTAATTACTTAATATACTACCGAAAA
TCTAGTGTAGTATCTGCTCATCTGGGCCATTGAACTAAAAAAATAAACGGTCCAAATTAATCTGATGTACCGTAAAAAGT
CTCACTAAACCATCTC---AATGATCCAAGCTAGGTAGATAACTTC----------TCTGTATCTGTAACTGTTGCCCTT
GCTGATGATGCAGAGGCCTACGACAAGCTGCAAAACGACCTGGTCACGGCCAAGGAGCGGCTCACCAACATCCTGCAATC
CAAAGATAGGAAGAAAACTGTAAGATCTGAAACAACAAGAGCTCAAA--AATGCCG-TCACTAGTCTG-----------G
TATGAACCTGCTGAGTTTTT-GTAATTGTGAATTGCTCTTGCGCAGCTGCTCGACATGGTTGAACGGAACGAGCTCAACA
TGTCCATATTAACGCTTCTCGACGAGAACATAGCGAGCGCCAAGACCAGTAACCAGGTGATGTGCTGCCCCTGGCCTCTA
TAAGGAATGAGAACCGGATAAATTAGCAATGCTTTGGATCTTTGATCGTGTGCTTCTTTTGCTACTATTTATTCTAAACC
TGTGTGTTTGTGTTTACTTTTCAGGAGGAGGCCGTGGCTTTCATGGAGGATGTGCGCTCATCTATGCTGAAATACATAAC
AGTATAAATTTTGCCTACATACACCGGTGACCAGTTATCTCTGCTATGGCACTGGAGTCGT--CTTCGGCGCATAGTTGT
TCGAATTAATT-CAATGGAGCTGTAATTCACAAGGCCATCTTGTGTGTTGTAATTTTGTTTCGGTTGTATCTAGTTGTTC
TG-TCTGATATATGTTGCAATTGTCAGTAGCTTTACTGGCAAAAAGAGATTGTACA-ATCATATGTACATGCACGGCTGT
ACCAGAAACAAATACAACAAGACTATGATCTGTTCTCCTGGTCGGTAAACTGGTTTACCAATGTATGATTTGCTAGTGGT
TTCTTAC----AACATGTAACAATTTGCACTGAAGTTCACACAAAGGGCTGTACTTAGGAAGAGGCAGTATCTATGTTTG
AGAATGATCTGCAGAAAAAGGAGGTACACCGCGTTTTCTTACTGA---AGTGCATATAATCCATGG------CGATTAAA
GTTAAACACATGCCCCTGATGCTTGAATGAAAC-GGAAAAAATGCAGATTCTGCTGTCTAAAGAGAGAAAGAGAAGGAAG
AAAAAGAAGAACAGAACAAAAAGAAAAGAGATATCACAAAGAGGATCA---GCAGCATGGCATTGTCTACCGGTTCAAGG
AACGAAGCAATGCTTTGGAAAAAACAAAAGCAACA-TGATGCCAGAAGCCAGCGCCATCACCGCTACACCCGTCCTGCCG
AAACATATGGCTGCTCCATCTCTCACTGCATTCTGAGGAGCTCCATGACATGAAACAGTGTAGTTTCCTTTTGTCTTAAC
CAAGATGATCGAGTGATATATCGCCGCCCGGGACTGGATTTCTTGGGGACATCATTTCTTATCGCTCGCTGCAAGTGTTC
TTCCCTGCTTCTTGGAGACAGCTCCAGAGGTACCACAGTTGCACATACTACATTTTAATCCGTATTTTCTCATTGGT-TT
TCACAGCTTCAGATCAGGATTGAGGAGATCCGGCCTCTTTACTTTTGCAGGGAGTGCAGAGATCTACAGCT
>chr2A_990
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-----------------------------CGGCTCCGGCCATGGCTTCCACCTCCTCCTCCCTCGGCGCCATCCTCCAGC
GCTTCCCGCTCCTGGCGCCCCGCCCCGCCTCCCGCCGCGCGCCCACCACCCGCCGCGCCGTCGCCAACAAGATCTCCTGC
ATCGGATGGGTACGTG------CCAAGCCTCTCCATCTCTCGGCTCAGCTGGCTGTCCGGTGCTGACTGACTGACTGACG
CGCTCGGTTTGGGACGC----AGGACCCGGAGGGCATCCTGGCGCCGCCGCAGCCGGGCCACATCTCGCGCCTCGAGTTC
CGGCGCCGCCTCGACAGCGACGCCGACGCGCGCGCCGCCTTCGACCTCCAGGTCAAGGAGGAGCAGGAGCGCCGCCGCAA
GGAGCGCGAGGTACGGTAATTCATTCATCAATTGCCATTCCGT------------------G-----GCCGGCCTGAGCT
GACAGCTGACGGGATGACACTGGCATGGCCGCGTGAGTGCAGGCGCGGGTGATACCTGAGACGGACGCCGGGCTGGTGGA
GTTCTTCCTGGACACGGACGCGCGGGAGATCGAGATCGAGATCGGCAGGCTCCGCCCCAGGCTCAACAAGGGCTTCTTCG
ACCACATCCAGCGGGAGATCGCGCAGATCAAGTTCGCGGTCACCAGGACAGCGGTCTGCACCAACTGTTTTGCACACATT
TCAACCTGA---GTTCTCTGCTC-----TGTGTGGTAAAATTTGTTCCAATTGATCAATTCCAGCCTGATTTTGATTTCT
TCCGTGTGCGCGC--GCAGGCAAATGAAGACAGGCTGATCGAGCTGGAGGCGATGCAGAAGGTCATCGGGGAGGGAGTCG
GTCAGTGAACAAAATCTTAGCCCCATC-----------------------------------------------------
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------AAACTCGCTG---AATAATCCAAGCTAGCTTGATGACTTCTGTCTGTGTATCTGTATCTGTAACTGCTGTCCTT
GCTGATGGCGCAGAGGCCTACGACAAGCTGCAAAACGACCTGGTGACGGCCAAGGAGCGGCTCACCAACATCCTGCAATC
CAAAGACAGGAAGAAAACTGTAAGACCTGAAACAACAAGGGCTAAAAAAA-TGCTG-TCACTTATCTGG----GAGTATG
TATGAACCTGCTGTGTTTTTTGTAATTGTGAATTGTCGTTGCGCAGCTGCTCGACATGGTCGAACGGAACGAGCTCAACA
TGTCCATATTGACGCTTCTTGATGAGAACATAGCGAGTGCCAAGACGAGTAACCAGGTGATGTGCTGCCCCTGGCCTCTA
TAAGGAAGGAGAACCGAATAGATTAGCAATGCTTTGGATCTTTGGTC-TGTGTTTCTGTTGCTACTATTTATTCTGAACT
TGTGTGTTTGTATTTGCTTTTCAGGAGGAGGCTGTGGCTTTCATGGAGGATGTGCGCTCATCTATGCTGAAATACATAAC
AGTATAAATTTTGCCTACATATGGC-GTGACCAGTTATCTGTGGCATTGGAGTCGACTCC---CTTCAGCACATAGTTGT
TCGAATAAATT-CGAAGGAGCTGTAATTCAGAAGGCTATCTTGTGTGCTATAATTTTGTTTCGGTTGTATTTAGTTGTTT
TG-TTTCATATATGTTCCAATTGTCAATAGCTTTACTGGCAAAGAGAGATTCTACA-ATCATATATACATGTACGGCTGT
ACCACAAACAAACACAACAAGACTATCATCTGTTCTCCTGGTCGGTTAACTGGTTTAGGAATGTATGATTTGCTAGTGAT
TTCTTACAGTAAATCTGTAACAATTTGTAACAAT--------------------T-----AGAGACAGTACCTATGTTTG
AGAATGATCTGCAGAAAA-GGAGGTACACCACATTTTCTTACTGATGAAGTACATATAATCCATGTCCATAGTGATTAAA
GTTAGACACACGCCCCTGATGCTTGAACGAAACGGGAAAAAATGCAGATTCTGCCGTCTAAAGAGAAAAAGAAAAGCAAG
AAAAAGAAGAAAAGAACAAAAAGACAAGAGATATCACAAAGAGGATCA---ACAGCATGGCATTGTCTACCGGTGCAAGC
AAGGAAGCAATGCTTTGTAAACAACAAAAGCAACA-TGATGCCAAAAGCCAGTACCTTCACCGCAACACCCGTCCTGCCG
AAACGTATGGCTGCTCCATCTCTCACTGCATTCTGAGGAGCTCCATGACATGGAACTGTGAAGTTTCATTTTGTCTTAAC
CAAGATGATCGAGTGATATATCGCCGCCCGCGACTGGATTTCTTGGGGACATCATTTCTTATCCCT----GCAAGTGTTC
TTCCCTATTTCTTGGAGACAGCTTCAGAGGTACCACAATTGCACATACTACATTTTAATCCATGTTTTCTCATTGGT-TT
TCGCAGCTTCAGATCAGGATTCAGGAGATCCGGCCTCCTTACTTTTACAGGGAGTGCAGAGATCTACAGCT
>chr2D_996
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-----------------------------------CGGCCATGGCGTCCACCTCCTCCTCCCTCGGCGCCATCCTCCAGC
GCTTCCCGCTCCTGGCGCCCCGCCCCGCCTCCCGCCGCGCGCCCACCGCCCGCCGCGCCGTCGCCAACAAGATCTCCTGC
ATCGGATGGGTACGTG------CCAAGCCTCTCCATCTCTCGGCTCAGCTGGCTGGCCGGCG----CTGACTGACTGACG
CGCTCGGCTTGGGACGC----AGGACCCGGAGGGCATCCTGGCGCCGCCGCAGCCGGGCCACATCTCGCGCCTCGAGTTC
CGGCGCCGCCTCGACAGCGACGCCGACGCGCGCGCCGCCTTCGACCTCCAGGTCAAGGAGGAGCAGGAGCGCCGCCGCAA
GGAGCGCGAGGTACGGTAATTCATTCATTGGCTGCAATTCCGTCCGTCGAGCACGTCCCCTTCCCTTGCCGGCCTGAGCT
GAG--CTGACAAGATGACACGGCG-TGGCCGCGTGAGTGCAGGCGCGGGTGATACCTGAGACGGACGCCGGGCTGGTGGA
GTTCTTCCTGGACACGGACGCGCGGGAGATCGAGATCGAGATCGGCAGGCTCCGCCCCAGGCTCAACAAGGCCTTCTTCG
ACCACATCCAGCGCGAGATCGCGCAGATCAAATTCGCGGTCACCAGGACAGCGGTCTGCACCAACTGCTTTGGATACATT
TCAACCTGC---TTCCTCTGCTC-----CGTGTGGTAAAATTTGTTCCAATTGATCAATTCCAGCCTGATTTTGATTTCT
TCTGTGTGCGCGC--GCAGGCGAATGAAGACAGGCTGATCGAGCTGGAGGCGATGCAGAAGGTCATCGGGGAGGGAGTTG
GTCAGTGAACAAAATCTTAACTCCATG-----------------------------------------------------
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------ACACTTGCTGAATAATAATCCAAGCTAGGTAGATAACTTC----------TCTGTATCTGTAACTGCTGTCCTT
GCTGATGGTGCAGAGGCCTACGACAAGCTTCAAAACGACCTCGTGACGGCCAAGGAGCGGCTCACCAACATCCTGCAATC
CAAAGATAGGAAGAAAACTGTAAGATCTGAAACAACAAGGGCTCAAA--AATGCTGTTCACTTATCTGGGAGGGAGTATG
TATGAACCTGCTGAGTTTTTTGTAATTGTGAATCGTTGTTGCGCAGCTGCTCGACATGGTCGAACGGAACGAGCTCAACA
TGTCCATATTGACGCTTCTCGACGAGAACATAGCGAGCGCCAAGACGAGTAACCAGGTGATGTGCTGCCCCTGACCTCTA
TAAGGAAGGAGAACCGAATAAATTAGCAATGCTTTGGATC-TTGATCGTGTGCTTCTTTCGCTACTATTTATTCTAAACT
TGTGTGTTTGTATTTACTTTTCAGGAGGAGGCTGTGGCTTTCATGGAGGATGTGCGCTCCTCTATGCTGAAATACATAAC
GGTATAAATTTTGCCTACATACGGCGGTGAGCAGTTATCTCTGCTCTGGTACTGGAGTCGT--CTTCGGCACATGGTTGT
TGGAATTAATT-CAATGGAGCTGTAATTCACAAGGCCATCTTGTGTGCTGTAATTTTGTTTCGGTTGTATTTAGTTGTCC
TG-TTTCATATATGTTGAAATTGTGAGTAGCTTTATTGGCAAAGAGAAATTGTAAAGATCATATATACTTTTACGGCTGT
ACCACAGATATATACAACAAGACT--------------------------------------------------------
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>chr6A_1441
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--------------TGACACGGCG-TGGCTGC----GTGCAGGCGCGGGTGATACCTGAGACGGACGCCGGGCTGGTGGA
GTTCTTCCTGGACACGGACGCGCGGGAGATCGAGATCGAGATCGGCAGGCTCCGCCCCAGGCTGAACAAGGCCTTCTTCG
ACCACATCCAGCGGGAGATCGCACAGATCAAATTCGCGGTCACCAGGACAGCGGTCTGTACCAAAC----TGCATACATT
TCTACCTGATGATTCCTCTGCTC-----CGTGTGGTAGATTTTGTTCCAATTGATCAATTCCAGCTTGATTTTGATATCT
TCCGCGTGTGCAC--GCAGGCAAACGAAGACAGACTGATCGAGCTGGAGGCCATGCAGAAGGTCATCGGGGAGGGAGTCG
GTCAGTGAGCAAAATCTTAACTCCATG-----------------------------------------------------
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------AAACTTTCTG---CATAATCCAAGCTAGCTCGATGACTTCTGTCTGTGTATCTCTATCTGTAACTGCTGTTCTT
GCTCATGATGCAGAGGCCTACGACAAGCTGCAAAACGACCTCGTGACGGCCAAGGAGCGGCTCACCAACATCCTGCAATC
CAAAGATAGGAAGAAAACGGTAAGATCTGAAACAACAAGACTTCAAA--A-TGCTG-TCACTTATCTG-----------A
TATGAACCTGCTGAGTTTTT-GTAATTGTGAATTGATGTTGCACAGCTGCTCGACATGGT--------------------
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>chr5D_1847
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----------------------------------GGGAGATTTTACTGTACATCATACTACTCAACATAACAGGTAGTAT
TAAGTTAATCTAATGGTCAGCATGAGACGGTCGGATTTTAACTTAAGGACATATTGGTAATTATGTTTCGTCTAATTAAT
TAGACTGATTGCAGCGGACCGCCGCTGCAGGCCTCCGTCCCCAATGCCGGCCATCCATCGCTAGCAAAATAATCAGCCTG
CAGGTCGCCGCCCC-ATGTTCTCGGCCATCCAGACGCTGCATGCAGGCTGGCTCCCCCTCCATCCCAACACCGCATGCAC
TACTCCCAGCGCACTGTCATCCCAACGCTGCCAAAAATCACAGCCTACGCTGCTTGCAGGCCACCGGCGGCTGCAGGAAC
TAACTTAATTAGCTAGCTTTTATTTTGGAAAAGAATGCACATGGCATGATGTAAAGAAGAGAGCTCGATGGAGTTGAATA
TTTACCATGATATGGCCTCGTATTCTAGTGTCTGCATGGTCATTCATGGGACGGGCTGGACAAGGTCAGGGTCATGCGGC
CCAAGCCAAGGCTGTCGTCTATATGTCAGCGACCAGTTTCAGATACCGGAGGCTTGACAAGAAGACCAAAAATCGGGTAA
TCTATCCGCGGACGACAGACGGCAAGCGAGGAAGAGGGCATGCGGCCGGGGCGGCGCACTCGCCTTCGTCGTCTTCGTCA
GGTGACCCACTCAAAATCCTGTAGGTTCGAGGGTAACACAAAGGCATGACAACTCGCCGCTGCCGACGGCTAGCTATGAC
GCGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATGGCAAATGAACGAGTGTGGGATGGAGAATTACTGCCTGAG
ATTTCAGGGGAAGGTGCCTGCGGGATGGATACATTTGAACTACCCAAGACGCCCTTAATTACTTAATATACTACCGAAAA
TCTAGTGTAGTATCTGCTCATCTGGGCCGTTGAACAAAAAAAATTAATGGTCCAAATTAATCTGATGTACCGTAAAAGGT
C-------------------------------------------------------------------------------
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>chr5D_1847
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----------------------------------GGGAGATTTTACGGTACATCATACTACTCAACATAACGGGTAGTAT
TAAGTTAATCTAATGGTCAGCATGAGACGGTCGGATTTTAACTTAAGGACATATTGGTAATTATGTTTCGTCTAATTAAT
TAGACTGATTGCAGCGGACCGCCGCTGCAGGCCTCCGTCCCCAACGCCGGCCATCCATCGCTAGCAAGATAATCAGCCTG
CAGGTCGCCGCCCCCATGTTCTCGGCCATCCAGACGCTGCGTGCAGGCTGGCTCCCCCTCCATCCCAACACCGCATGCAC
TACTCCCAGCGCA-------------------------------------------------------------------
------------CTAGCTTTTATTTTGGAAAAGAATGCACATGGCATGATGTAAAGAAGAGAGCTCGATGGAGTTGAATA
TTTACCATGATATGGCCTCGTATTCTAGTGTCTGCATGGTCATTCATGAGACGGGCTGGACAAGGTCGGGGTCATGCGGC
CCAAGCGAAGGCTGTCGTCTATATGTCAGCGACCAGTTTCAGATCCCGGAGGCTTGACGAGAAGACCAAAAATCGGGTAA
TCTAGCCACGGACGACAGCCGGCAAGCGAGGAAGAGGGCATGCGGCCGGGGCGGCGCACTCGCCTTCGTCGTCTTCGTCA
GGTGACCCACTCAAAATCCTGTAGGTTCGAGGGTAGCACAAAGGCATGACAACTCGCCGCTGCCGACGGCTAGCTATGAC
GCGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATGGCAAATGAACGAGTGTGGGATGGAGAATTACTGCCTGAG
ATTTCAGGGGAAGGTGCCTGCGGGATGGATACATTTGAACTACCCAAAACGCCCTTAATTACTTAATATACCACCAAAAA
TCTAGTGTAGTATCTGCTCATCTAGGCCGTTGAACAAAAAAAATTAACGCTCCAAATTAATCTGATGTA-----------
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>chr7A_2617
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---------------ACTTTTCAGGAGGAGGTTGTGGCTTTCATGGAGGATGTGCGTTCATCTATGCTGAAATACATAAC
AGTATAATTTTTGCCTACATACTCCAGTGACCAGTTATATCTGGCGTTGGACTCGTCTTTGGACTTCGGCACATAGTTTG
TTCAAATAATTGCCATGGGGTTATAATTTGGGGGACATCATA-TGGGCTGTAATTTTGTTTCAGTTGTTTTTAATTGTTC
TCTTTTCATATATGTTCTGATTGTCAGTAGCTTTACTGGCAAAGAGAGATTGTACA-ATCATATATACATGTACGGCTGT
ACCACAAACAAATACAACAAGACGATGATCCGTTCTCCTGGTTAGTTAACTGGTTTATGAATGTATGATTTGCTAGTGGT
TTCTTACAGTAAACATGTATCAATTTGCACTGAAGTTCACACAAAGGGCTGTACT-----AGAGACAGTATCTATGTTTG
AGAATGATCTGCAGAAAAAGGAGGTACACCACGTTTTCTTACTAA---AGTACATATAATCCATGG------CGATTAAA
GTTAAACACATGCCCCTGATGCTTAAATGAAAC-AGAAAAAATGCAGATTCTGCTATCTAAAGACAGAAAGAAAGGGATG
AAAAAGAAGAACAGAACAAAAATAAAAGAGATATCCCAAAGAGGATCAGCAGCAGCATGGCATTGTCTACTGGTGCAAGC
AAGGAAGCA-TGATTTGGCAAAAACAAAAGCAACATTGATGCCAAAAGCCAGCACCATCACCGCTACACCCATCTTGCAG
AAACGTATGGCTGCTCCATTTCTCACTGCATTCTGAGGAGCTCTATGACATGAAACAGTGAAGTTTCTTTTTGTCTTAAC
CAAGATGATCGAGTGATATATAGCCGCCCGGGACTGGATTTCTTGGGGACATCATTTCTTATCGCT----ACAAGTGTTC
TTCCCTGCTTCTTGGAGACAGCTCCAGAGGTACCACAATTGCACATACTACATTTTAATCCATGTTTCCTCATTGGTTTT
TCACAGCTTCAGATGAGGATTTAGGAGATCCGGCCTCTTTACTTTTGCAGGGAGTGCAGACATCTACA---
>chr6A_2617
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---------------ACTTTTTAGGAGGAGGTTGTGGCTTTCATGGAGGATGTGCGTTCATCTATGCTGAACTACATAAC
AGCATAATTTTTGCCTACATACTCCAGTGATCTGTTATCTCTGGCATTGGACTCGTCTTTGGACTTCGGCACATAGTTTG
TTCAAATAATTGCCATGGGGTTATAATTTGGGGGACATCATA-TGGGCTGTAATTTTGTTTCAGTTGTTTTTAGTTGTTC
TCTTTTCATATATGTTCTAATTGTCAGTAGCTTTACTGGCAAAGAGAGATTGTACA-ATCATATATACATGTACGGCTGT
ACCACAAACAAATACAACAAGACGATGATCTATTCCCCTGGTCAGTTAACTGGTTTATGAATGTATGATTTGCTAGTGGT
TTCTTACAGTAAACATGTATCAATTTGCACTGAAGTTCACACAAAGGGCTGTACT-----AGAGGCAGTATCTATGTTTG
AGAATGATCTGTAGAAAAAGGAGGTACACCATGTTTTCTTACTGA---AGTACATATAATCCTTGT------TGATTAAA
GTTAAACACATGCCCCTGATGCTTAAATGAAAC-AGAAAAAATGCAGATTCTGCTATCTAAAGAGAGAAAGAAAGGGATG
AAAAAGAAGAACAGAACAAAAAGAAAAGAGATATCCCAAAGAGGATCAGCAGTAGCATGGCATTGTCTACTGGTGCAAGC
AAGGAAGCA-TGCTTTGGCAAAAACAAAAGCAACATTGATGCCAAAAGCCAGCACCACCACCGCTACACCCGTCTTGCAG
AAACATATGGCTGCTCCATTTCTCACTGCATTCTGAGGAGCTCTATGACATGAAATAGTGAAGTTTCTTTTTGTCTTAAC
CAAGATGATCGAGTGATATATAGCCGCCCGGGACTGGATTTCTTGGGGACATCATTTCTTATCGCT----ACCAGTTTTC
TTCCCTGCTTCTTGGAGACAGCTCCAGAGGTACCACAATTGCACATACTACATTTTAATCCATGTTTTCTCATTGGTTTT
TCACAGCTTCAGATGAGGATTTAGGAGATCCGGCCTCTTTACTTTTGCAGGGAGTGCAGACATCTACAGCT
>chr1A_2617
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---------------ACTTTTCAGGAGGAGGTTGTGGCTTTCATGGAGGATGTGCGTTCATCTATGCTGAAATACATAAC
AGTATAATTTTTGCCTACATACTCCAGTGACCAGTTATATCTGGCGTTGGACTCGTCTTTGGACTTCGGCACATAGTTTG
TTCAAATAATTGCCATGGGGTTATAATTTGGGGGACATCATA-TGGGCTGTAATTTTGTTTCAGTTGTTTTTAGTTGTTC
TCTTTTCATATATGTTCTAATTGTCAGTAGCTTTACTGGCAAAGAGAGATTGTACA-ATCATATGTACATGTACGGCTGT
ACCACAAACAAATACAACAAGACGATGATCCGTTCTCCTGGTCAGTTAACTGGTTTACGAATGTATGATTTGCTAGTGGT
TTCTTACAGTAAACATGTATCAATTTGCACTGAAGTTCACACAAAGGGTTGTACT-----AGAGGCAGTATCTATGTTTG
AGAATGATCTGCAGAAAAAGGAGGTACACCACGTTTTCTTACTGA---AGTACATATAATCCATGG------CGATTAAA
GTTAAACACATGCCCCTGATGCTTAAATGAAAC-AGAAAAAATGTAGATTCTGCTATCTATAGAGAGAAAGAAAGGGATG
AAAAAGAAGAACAGAACAAAAATTAAAGAGATATCCCAAAGAGGATCAGCAGCAGCATGTCATTGTCTACTGGTGCAAGC
AAGGAAGCA-TACTTTGGCAAAAACAAAAGCAACATTGATGCCAAAAGCCAGCACCATCACCGCTACACCCGTCTTGCAG
AAACGTATGGCTGCTCCA---------------------GCTCTATGACATGAAACAGTGAAGTTTCTTTTTGTCTTAAC
CAAGATGATCGAGTGATATATAGCCGCCCGGGACTGGATTTCTTGGGGACATTATTTCTTATCGCT----ACAAGTGTTC
TTCCCTGCTTCTTGGAGACAGCTCCAGAGGTACCACAATTGCACATACTACATTTTAATCCATGTTTTCTCATTGGTTTT
TCACAGCTTCAGATGAGGATTTAGGAGATCCGACCTCTTTACTTTTGCAGGGAGTGCAGACATCTACAGCT
>chr1A_2617
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---------------ACTTTTCAGGAGGCGGATGTGGCTTTCATGGAGGATGTGCGCTCATCTATGCGGAAATACATAAT
AGTACAATTTTTTCCTACATACACCGGTGACCAGTTATCTCTGGCATTGGACTCGTCTTTGGACTTCGGCACATAGTTTG
TTCAAATAATTGCCACGAGGTTGTAATTTGGGGGACATCATA-TGGGCTGTAATTTTGTTTCAGTTGTTTTTAGTTGTTC
TCTTTTCATATATGTTCCAATTATCAGTAGCTTTACTGGCAAAGAGAGATTGTATA-ATCATATATACATGTACGGCTGT
ACCACAAACAAATACAACAAGGCTATGTTCCGTTCTCCTGGTCAGTTAACTAGTTTACGAATGTAAGATTTATTAGTGGT
TTCTTACAATAAACATGTATCTATTTGCACTGAAGTTCACACAAAGGGCTGTACT-----AGAGGTAGTATCTATGTTTG
AGAATGATCTACAGAAAAAGGAGGTACACCGCGTTTTCTTAGTGA---AGTACATATAATCCATGG------CGATTAAA
GTTAAACACATGCCCCTGATGCTTAAATGAATAAA-AAAAAATGCAGATTCTGCTGTCTAAAGAGAGAAATAAAGGGAAT
AAAAAGAAGAACAGAAGAAAAAGAAAAGAGATATCCCAAAGTGGATCAGCAACAACATGTCATTGTCTACTAGTGCAAGC
AAGGAAGCA-TGCTTTGGCAAAAACAAAAGCAACATTGATGC-AAAAGCCAACACCATCACCGCTACACCTGTCCTGCAG
AAACGTATGGCTGCTCCATTTCTCACTGCATTCTGAGGAGCTCTATGACGTGAAACAGTGAAGTTTCCTTTTGTCTTAAC
CAAGATGATCGAGTGATATATCACCGCCTGGGACTGGATTTCTTGGGGACATCATTTCTTATCG----------------
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-----------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------S------------------------
----------S--S------------------------------------------------------------------
---------------SSSSSSS---S-S----------------S--S-------S------S-----------------
-----------------SSSS--------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------S-S------------S----------------------------SS------------S-------
S---S--SSS--S-S--------------------S--------------------------------------------
------------------------------------------------------S-------------------------
-------------------------------------S--------S--------------SSS-SS---SSSS-SSSSS
-----------------------SSSSS----S-----------------S----S------------------S----S
-------------SS-----------------------------------------------------------------
-----------------------S--SSSSSSSS----S-----------------------------------------
----------------------------S---S-----------------------------------------------
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------------------------------------------------------------------------S--S----
----------------S---------------------------------------------------------------
----------------------------S------S--------S--------------------------------S--
-SSSSS----SS---S------S-------------------------------------------------S--S----
--------------------------------------------S-----------------------------------
------------------------------------------------------S-------SS----------------
-----------------------------------S-S----------------------S-------------------
----------S-----------------------------------S---------------------------------
-------S--------S--------------------------------------------------------------S
-----------S--------------------S-----------------------------------------------
-------------------------------------------------S--------------------S---------
-----------------------------------------------S----------------------S---------
----S-S------------------------------------S---------------------------S--------
----S-----------------------------------------S-----------S---------------------
-------------------------------------------------------SSSSS--------------------
---------------------------------------------------S----------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------S----S
--S-----------------------------------------S--------S--------------------------
------------------------------------------------------------S-------------------
------------------------------------------------------------------SSSS----------
-------------------------------------S-----------------------S-S----------------
---------------------S-------------------------------------------------
>forward_951
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---------------------------------------------------TAGCGCGAAGGGATAACGTC---------
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>reverse_3181
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------------------------------------------------------------TGAACGGAACGAGCTCAACA
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>forward_2716
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--------------------------------------------------------TGGGATGGAGAATTACCGCG----
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>reverse_4310
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---------------------------------------------------------------------TGCAAGTGTTC
TTCCCTGCT-----------------------------------------------------------------------
-----------------------------------------------------------------------
