>input_sequence_45277
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------CCACTCGCTCTCGCTGAGAAAGCCGGCGCCCGGAGT
GGAGCCCGAGATCCCTCCCGGCCGCGCCGTGCCGGAGCTCCCACCAGCCGAGCTCGCAAAAGCCGCTGCCTTCCCTCCCT
TTTCTCGCGCGCTCGGGGGCGGGCACCGGAGCCGGCGGCGCGCGCCATGGGGTCCGTGTCCCTGAAGCTGCCGGCGTCCC
GCCGCCGCCACGGCGGGCCCCTCTCCTGCCTCTGCTCCCCGGCGCCGCTCAACCTCCTCATGCTTCTCTCCCTCCTCTGC
ACCAACCTCCTCGCCTTCTTCGCCTTCTTCGCCGCCTCCCCCCGCCACGACCCCGCCGCCAGCGCAA---TCCCCTCCTC
C------AACCTCTCCGCGCACGTCGCCGCCATCGCGCTCGAGATCGGCGACG---GCGCCTCCTCCGGCGCCCGCCTCC
CGGACGGCCTGCCCCCGGAGCTGCTCCTCTTCCTCACCCCGCACGCGCTGCCGCTCGGCCGCGACGCGCGGACGGGGCTC
ACCCACATGCCGGCCTCCGTCGCCGCCTCCTGCCTCCGGTCCCCGTCCGCGCTGGCGCTCCTCTCGGCCTTCATGTCCTA
CGCGCCCCACTCCGCCTGCCCGCGCAACTCCACCCTCCCGCGCCGCCTCGTCTCCAAGGGCTGCGAGCCGCTCCCCCGCC
GCCGGTGCCTCACCCGCGGGCCCCGCGCCCCGCTCCCGGCCTCCGGCATGGGCCTCGACCACCGCCGCTGGGCCGGCCCC
GCGCGCGGCGGCGGCCACGAGTTCCTCGCCGACGACGTGCTGCGCCTGGGCGCGTCCAAGATCCGGATCGGCCTCGACGT
CGCCGGCGGCGCCGCCAACTTCGCCGCCCGGATGAGGGAGCGCGGGGTCACCGTCGTCACGTCCGTGCTCGACGGCCCCG
GGAAGCCCATGAACGAGTTCGTGGCGTCAAGGGGCCTGTTCCCGCTGCTGCTCTCGCCGGCGCACCGGTTCCCCTTCTAC
GACGGGGTGTTCGACCTGGTGCACGTCGGCACCGCGGCGCTGGACGAGGCCGGGGCGCCCGCGATGGGGCAGGCGGCGAC
GCCGGAGGCGCTGGAGTTCTTCATGTTCGACGTCGACCGGGTGCTGCGCGCCGGCGGGCTGCTCTGGATCGACAGCTACC
TGTGCCAGAGCGAGGAGAGGAGGCGGGTGGTTGCCAAGCTCATAGAGAGGTTTGGTTACAAGAAGCTCAAGTGGGTCGCC
GGAGAGAAGGCCGGCGGTGCGGCGACATCAACCTACCTCTCCGCGGTGCTGCGAAAGCCGGCAAGGAGCTGAAATCATAC
---ACAAGGATTGATCAATCCAGGCTCCTTGATCAGAGGTACGGCCACTGTGCCCTCAAATTGTTTGTAGCTCCCAGATT
TTGATGGGACGAATGTGAATGTGAATGCCGTATAGGTGCCAAGGAATTTTTTAGATTACAGAAGAAACCGGTGCTACGGA
TTAGCTTGATTCCATTGGTTGTTGATTGTTGAGAGATAGTGACTGAAAATAACTGCAAGATTGTACAACTCTTCTACAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTGTTGATGCTATTAGATGGGACACAAGCCGTGCAGTGCTACTT
TTGTTGCTCTATTGGTGAATTGCAATTTGTGGAAGAGGTTGGAAAATGGTGTACACTGTACTGATCTTCCATTTCAGGAA
GAACGCGAAATAAATTGACGCTCTTCA-----A-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr7D_1_TraesCS7D01G076800
CACCCATCCATCAAACCATAATGTAGTTGAGGTTCTCTCCCGATCTCTACTCAATCAGATGTGGTCGGACGGCTCAGACC
AGTTTAAGAGGGGGCTCGATCCGTGGGAGGGTCAAGCTGACCAACTGCTGATGAGGACGCCCTCTATACCTTGGTACCGA
AATAGTTCCCGCTCAAACACAAGTTTCGAGTCTCGCCCGCGCTGAGATTTTTGGTTCAAACAAGCAAATTTTTGAAAATC
CATTCGTCTTGTAGCTCCGTCTCCCCACCCACCAAACCAAACCATCTCCCCCGACCCCGCAGTCGCCGGCACCACCACTC
CCATCCCCATCCCCACCTCTCCCACAACTTAGCCCGCGGCCATGGCATGGATCCGAAGCAGGTCAGCCGGCGGTGGCCAT
GCATGGCGCCTATCTTCCTCACCCCAGATCGGGCACGCTCCCTCCCAACACTCCAGATCTACCACCCATCGTCAAGGGCT
GGTCCTCGGCGGAGGTCGCCTCCATCCGGGACGGAACCCACGACGACTCGCCCGTGCGTGACGAGACGGCGCCGACGATG
AGTCTCTCCGCTCCTCTTCACATCTATCCCTCTCTTCCTCACCCCGCCTCATCTCCCTCTCAGATCCAGCACGTCGTCCT
CGCTCGCTGTGTTTTCCTTGATCAATTTCGTTCGCTGACGTAGCTGCTCTCCTCTGTTAGAAGATTCACGCTCAAATCCA
ACGGTTAAAAAGACGTTGGTCCCTATTTCATCTCGTAAAATTCCACGCTTGCAGTTTGGTCAAGAAAGTTAGACCTAATC
CAACAAACAATACAAGGAATCTC-TAAAAACTTTTAAAAATTTGAATTAGGCCAAACCTAGAACCTGATGTATTTT-AGA
ACTAAAAGAAA--TGTACTGTGTTTGGGATAACAAATAAATTAAGGTATCTACGAGACCGGATGTCATACACAACGACAG
CCCCCTTGGTCCTCGCTATCTCACTCCCCAGTCCCCACTCCACTCCACTCGCTCTCGCTGAGAAAGCCGGCGCCCGGAGT
GGAGCCCGAGATCCCTCCCGGCCGCGCCGTGCCGGAGCTCCCACCAGCCGAGCTCGCAAAAGCCGCTGCCTTCCCTCCCT
TTTCTCGCGCGCTCGGGGGCGGGCACCGGAGCCGGCGGCGCGCGCCATGGGGTCCGTGTCCCTGAAGCTGCCGGCGTCCC
GCCGCCGCCACGGCGGGCCCCTCTCCTGCCTCTGCTCCCCGGCGCCGCTCAACCTCCTCATGCTTCTCTCCCTCCTCTGC
ACCAACCTCCTCGCCTTCTTCGCCTTCTTCGCCGCCTCCCCCCGCCACGACCCCGCCGCCAGCGCAA---TCCCCTCCTC
C------AACCTCTCCGCGCACGTCGCCGCCATCGCGCTCGAGATCGGCGACG---GCGCCTCCTCCGGCGCCCGCCTCC
CGGACGGCCTGCCCCCGGAGCTGCTCCTCTTCCTCACCCCGCACGCGCTGCCGCTCGGCCGCGACGCGCGGACGGGGCTC
ACCCACATGCCGGCCTCCGTCGCCGCCTCCTGCCTCCGGTCCCCGTCCGCGCTGGCGCTCCTCTCGGCCTTCATGTCCTA
CGCGCCCCACTCCGCCTGCCCGCGCAACTCCACCCTCCCGCGCCGCCTCGTCTCCAAGGGCTGCGAGCCGCTCCCCCGCC
GCCGGTGCCTCACCCGCGGGCCCCGCGCCCCGCTCCCGGCCTCCGGCATGGGCCTCGACCACCGCCGCTGGGCCGGCCCC
GCGCGCGGCGGCGGCCACGAGTTCCTCGCCGACGACGTGCTGCGCCTGGGCGCGTCCAAGATCCGGATCGGCCTCGACGT
CGCCGGCGGCGCCGCCAACTTCGCCGCCCGGATGAGGGAGCGCGGGGTCACCGTCGTCACGTCCGTGCTCGACGGCCCCG
GGAAGCCCATGAACGAGTTCGTGGCGTCAAGGGGCCTGTTCCCGCTGCTGCTCTCGCCGGCGCACCGGTTCCCCTTCTAC
GACGGGGTGTTCGACCTGGTGCACGTCGGCACCGCGGCGCTGGACGAGGCCGGGGCGCCCGCGATGGGGCAGGCGGCGAC
GCCGGAGGCGCTGGAGTTCTTCATGTTCGACGTCGACCGGGTGCTGCGCGCCGGCGGGCTGCTCTGGATCGACAGCTACC
TGTGCCAGAGCGAGGAGAGGAGGCGGGTGGTTGCCAAGCTCATAGAGAGGTTTGGTTACAAGAAGCTCAAGTGGGTCGCC
GGAGAGAAGGCCGGCGGTGCGGCGACATCAACCTACCTCTCCGCGGTGCTGCGAAAGCCGGCAAGGAGCTGAAATCATAC
---ACAAGGATTGATCAATCCAGGCTCCTTGATCAGAGGTACGGCCACTGTGCCCTCAAATTGTTTGTAGCTCCCAGATT
TTGATGGGACGAATGTGAATGTGAATGCCGTATAGGTGCCAAGGAATTTTTTAGATTACAGAAGAAACCGGTGCTACGGA
TTAGCTTGATTCCATTGGTTGTTGATTGTTGAGAGATAGTGACTGAAAATAACTGCAAGATTGTACAACTCTTCTACAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTGTTGATGCTATTAGATGGGACACAAGCCGTGCAGTGCTACTT
TTGTTGCTCTATTGGTGAATTGCAATTTGTGGAAGAGGTTGGAAAATGGTGTACACTGTACTGATCTTCCATTTCAGGAA
GAACGCGAAATAAATTGACGCTCTTCA-----AGCTACCTACCCATGATATGGTCCATCCAAGTCTATCATTGATAGTAT
GTTGTGCAGCTCCTTTCAATCCATCTGTCTACCATTAATTCCCATATAGCTTAGGCAAACCTGCATAAGCAAAATAGTCC
AACAATTGGTTATCTTATTTATCACAATATAATTATTAACTGAAAAAATTATTGACATCTTGTGCTTGAAGCTTGATCAG
GAATAGTTTTTTTTTTCTGAAACAATATATGTTTTGCGCTAATTTACGTGTCATGCGAAAAATATCATGTCATATTTTGT
TGTTTTTCTTTTTGACACTGGCCTACAGATATGAATTCTTTATAGTTAGTTGTATGAGTGTACCATGTATCAGAGTTATT
ATATAGACCTATTCGTATCCAGTTGTCCTAAATTATAGCAATACCATGTCCATATGGATCAGGTTATTACGGTGCTTTGC
TTCTTCCGGAGCAGGGGGGAACACAACCAATTCTTATCATCAGAAACCAATCAAAATATAGTTGTCGGTGCATTTCATAC
AGCCATAGCATCACTGATTTTCAGTCTTCGGATTTCTGATGGTCTAAGGCGTCTAGAAAAGGAGGATACACTATATCTCC
GAAGTACATGTGAAGTTCTCTTAACCGCAGACTGAAGAGTTGCCATGTAAAAGTTTTTTGCCGAACATAAAACTATCAAT
TCTAGGAGCACCATCTGATGAAATCAGGGATTTCTGTGCTTTCCTTCCCTGTACATACACAATCTGCTTACCTACAAAAT
GAAGGTCAGGATGAGTATATGGCTGTATCAGCCGGGAGCAGACCTTCCTTCTTGGAATGTAAATTATGAGCTTCCACATA
CACATCTCCTCCAAAGTGTAAAGGCTGCCTGAAATGCTGCATTGTTACCATTATGCGACGTACATCATGTTAAGGCTATA
TAGAACTGTTATAATGTTCCCCCCTGCTTGCTCTCAGTTTTCGTTGTTACTAGGGAGTGGTTGCAGTTTGAAA
>chr4A_652
TTTTCCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GATCAATTTCGTTCGCTGACATAGTTGTTCCTCTGCTA---AAGATTCGCGATCAAATCCA
ACGGTTAAAAAGACATTTGTCCCCATTTCATCTCGTAAAGTTCCGCCCTCGCAGTTTGGTCAAAAGAGTTAGACCTAATC
CAACAAACAATACAAGGAATCTTTTAAAAACTTGAAAAAA--AGAATTAGGCCAAACCTAGAACCTGATGTATTTTTAGA
ACT-AAAGAAA--TGTACTGTGTTTGGGATAACAAATAAATCAAGGTACATACGAGACCGGATGTCATACACAACGACAA
CCCCCTCGGTCCTCTCTATCTCACTCCCCACTCCCCACTCCACTCGATTCGCTCTCGCTGAGCAAGCCGGCGCCCGGAGC
AGAGCCCGAGATCCCTCCCCGCCGCGCCGGGCCGTGGTTTCCACTAGCCGAGCTCGCAAAAGCCGCTGCCTTCCATCCCT
CTTCTCGCCCGCTCGGGGGA--GCAACGGAGC------CGCGCGCCATGGGGTCCGTGTCCCTGAAGCTGCCGGCGTCCC
GCCGCCGCCACGGCGGGCCGCTCTCCTGCCTCTGCTCACCGGCGCCGCTCAACCTCCTCATGCTGCTCTCCCTCCTCTGC
ACCAACCTCCTCGCCTTCTTCGCCTTCTTCGCCGCCCCTCCCCGCCACGACCCCGCCGCCGGCACAA---CCCCCTCCGC
CTCCTCCAACCTCTCCGCGCACGTCGCCGCCATCGCGCTCGAGATCGGCGGCGGGTCCTCCTCCTCCGGCGCCCGCCTCC
CGGACGGCCTGCCCCCGGAGCTGCTCCTCTTCCTCACCCCGCACGCGCTGCCGCTCGGCCGCGACGCGCGGACGGGGCTC
ACCCACATGCCGGCCTCCGTCGCGGCCTCCTGCCTCCGCTCCCCGTCCGCGCTGGCGCTCCTCTCGGCCTTCATGTCCTA
CGCGCCCCACTCCGCCTGCCCGCGCAACGCCACCCTCCCGCGCCGGCTCGTCTCCAAGGGCTGCGAGCCGCTGCCCCGCC
GCCGGTGCCTCTCCCGCGGGCCCCGCGCCCCGCTCCCGGCCTCCGGCATGGGCCTCGACCACCGCCGCTGGGACGGCCCC
GCGCGCGGCGGCGGCCACGAGTTCCTCGTCGACGACGTGCTGCGCCTGGCCGCGTCCAAGATCCGGATCGGCCTCGACGT
CGCCGGCGGCGCCGCCAACTTCGCCGCCCGGATGAGGGAGCGCGGGGTCACCGTCGTCACCTCCGTGCTCGACGGGCCCG
GGAAGCCGATGAACGAGTTCGTGGCGGCGAGGGGCCTGTTCCCGCTCCTGCTCTCGCCGGCGCACCGGTTCCCCTTCTAC
GACGGGGTGTTTGACCTGGTGCACGTCGGCACCGCGGCGCTGGACGAGGCCGGGTCGCCCGCCATGGGGCAGGCGGCGAC
GCCGGAGGCGCTGGAGTTCTTCCTGTTCGACGTCGACAGGGTGCTGCGCGCCGGCGGGCTGCTCTGGATCGACAGCTACG
TGTGCCAGAGCGAGGAGAGGAGGCGAGTGGTTGCCAAGCTCGTTGACAGGTTTGGTTACAAGAAGCTCAAGTGGGTCGTC
GGAGAGAAGGCCGGCGGTGCAGCGACATCAACCTACCTCTCGGCGGTGCTGCGAAAGCCGGCAAGAAGCTGAAATCATAC
TACACAAGGATTGTTCAATCCAGGCTCCTTGGTCAGAGGTACGACGACTGTACCTTCAAATTGTTTGTAGCTCGCAGATT
TTGATGGGACGA---------------------------CAAGGAATTTTTTAGATTACAGAAGAAACCGGTGCTACGGA
TTAGCTTGATTCCATTGGTTGTTGAATGTTGAGAGATAGTGACTGAAAGTAACTGCAAGATTGTACAACTCTTCTACATT
GGTTGTTGAACGTTGAGAGATAGTGACTGGAAATAACTGCAAGATTGTACTTCCTTCGATTCATATTACTTGTCGCTCAA
ATGGAAGTATCTAGACGTAT-----------------------------------TTCAGTGCTAGATACATCAATTTGA
GCGACACGAAATATGGATCAGAGGGAGTTTCTACATTTGTTGATGCTATTAGATGGGACACAAGCCGTGCAGTGCTACTT
TTGTTGCTCTATTGGTGAATTGCAATTTGTGGAAGAGGTTGGCAAATGGTGTACACTGTACTGATCTTCCATTTCAGGAA
GAATGCGAAATTAACTGACGCTGTTCGAATCGAGCTACCTACCCATGATATGGTCCATCCAAGTCTATCATTGATAGTAT
GTTGTGCAGCTCCTTTCAATCCATCTGTCTATCATTAATTCCCATCTAGCTTAGGCAAACCTGCATAAGCAAAATAGTCC
AACAATTGGTTATCTTATTTATCGTGAC--AATTATTAACTGACAAAATTATTGACATCTTGTGCTTGAAGCTTGATTAC
GAATAGCTTTTATTTTCTGAAACAATATGTGTTTTGCGCTAATTTACGTGTCATGCAAAAAATATCATGTCATATTTTGT
TGTTTTTCTATTTGACACTGGCCTACAGATATGAATTCATTATAGTTAGTTACATGAGTTG-CCGTGTATCAGAGTTATT
ATAT-GACATGTTCCTATCTAATTGTACTAATTTATAGCAACACCATGTCCATATGGATCAGGTTATTAAGGTGCTTTGC
TTCTTCTGGAGCAGTGGGAAACACAACCAATTTTTATCATCCGAAACCAATCAAAATATAGTTGCCGGTGCATTTCATAC
AGCCATAGCATCACTGATGTTCAATCTTCGGATTTCTGATGGTCTAAGGCGTCTAGAAAAGGAGGATACACTATATCTCC
GAAGTGCATATGAAGTTTTCTTAACCGCAGACTGAAGAGTTGCCATGTAAAAGTTTTTTGCCGAACATAAAACTATCAAT
TCTAGGAGCACCATCTGATGAAACCAGGGATTTCTGTGCTTTCCTTCCCTGTACATACACAAACTGCTTACCTACAAAAT
GAAGGTCAGGATGAGTGAATGACTGTATCAGCAGGCAGCAG---------------------------------CACATA
CACATCTCCTCCAAAGTGTAAAGGCTGCCTGAAATGCTGCATTGTTACCGTTATGCGACGTAAATCATGTTAGTGCTATA
TGGAACTGTTATAATGTTCACCCCTGTTTGCTCTCAGTTTTCGTTGTTACTAGGGAGTGGTTGCAGTTTGAAA
>chr7A_744
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TATTTCATCTCCTACAGTTCCGCGCTCGCAGTTTGGTCAAAAAAGTTAAACCTAATC
CAACAAACAATGCAAGGAATCTC-TAAAAACTTTAAAAAA--TGAATTAGGCCAAACCTAGAACCTGATGTATTTT-AGA
ACA-AAAGAAATGTGTACTATGTTTGGGATAACAAATAAATTAAGTTATCTACGAGACCGGATGTCACACACAACGACAA
CCCCCTCTGTCCTCGCTATCTCACTCACTCCCAGAGTCCCCACTCCACTCGCTCTCGCTGAGCAAGCCGGCGCCCGGAGC
AGAGCCCGAGATCCCTCGCCA-----CCGCGCCGGAGCTCCCACTAGCCGAGCTCGCAAAAGCCGCTGCCTTCCCTCCCT
CTCCTCGCGCGCTCGGGGGA--GCACCGGAGCCGGCGGCGCGCGCCATGGGGTCGGTGTCCCTGAAGCTGCCGGCGTCCC
GCCGCCGCCACGGCGGGCCCCTCTCCTGCCTCTGCTCCCCGGCGCCGCTCAACCTCCTCATGCTGCTCTCCCTCCTCTGC
ACCAACCTCCTCGCCTTCTTCGCCTTCTTCGCCGCCCCTCCCCGCCACGACCCCGCCGCCAGCACAA---CCCCCACC--
----TCCAACCTCTCCGCCCACGTCGCCGCCATCGCGCTCGAGATCGGCGGCGCGTCCTCCTCCTCCGGCGCCCGCCTCC
CGGACGGCCTGCCCCCGGAGCTGCTCCTCTTCCTCACCCCGCACGCGCTGCCGCTCGGCCGCGACGCGCGCACGGGGCTC
ACCCACATGCCGGCCTCCGTCGCGGCCTCCTGCCTCCGGTCCCCGTCCGCGCTGGCGCTCCTCTCGGCCTTCATGTCCTA
CGCGCCCCACTCCGCCTGCCCGCGCAACGCCACCCTCCCGCGCCGCCTCGTCTCCAAGGGCTGCGAGCCGCTGCCCCGCC
GCCGGTGCCTCTCCCGCGGGCCCCGCGCCCCGCTCCCGGCCTCCGGCATGGGCCTCGACCACCGCCGCTGGGCCGGCCCC
GCGCGC---GGCGGCCACGAGTTCCTCGCCGACGACGTGCTGCGCCTCAGCGCGTCCAAGATCCGGATCGGCCTCGACGT
CGCCGGCGGCGCCGCCAACTTCGCCGCCCGGATGAGGGAGCGCGGGGTCACCGTCGTCACCTCCGTGCTCGACGGCGCCG
GGAAACCGATGAACGAGTTCGTGGCGGCGAGGAGCCTGTTCCCGCTGCTGCTCTCGCCGGCGCACCGGTTCCCCTTCTAC
GACGGGGTGTTCGACCTGGTGCACGTGGGCACCGCGGCGCTGGACGAGGCCGGGGCGCCCGCGATGGGGCAGGCGGCGAC
GCCGGAGGCGCTGGAGTTCTTCATGTTCGACGTCGACCGGGTGCTGCGCGCCGGCGGGCTGCTCTGGATCGACAGCTACC
TGTGCCAGAGCGAGGAGAAGAGGCGGGTGGTTGCCAAGCTCATTGACAGGTTTGGTTACAAGAAGCTCAAGTGGGTCGCC
GCAGAGAAGGCCGGTGGCGCGGCGACATCAACCTACCTCTCCGTGGTGTTGCGAAAGCCGGCAAGAAGCTGAAATCATT-
--CACAAGGATTGTTCAGTCCAGGCTCCTTGATCAGAGGTACGACGACGGTACCTTCAAATTGTTTGTAGCTCGCAGAGT
TTGATGAGGGGAATGTGAATGTGAATGCCGTATAGGTGCCACAGAATTTTTTAGATTACGGAAGAAACCGGTGCTACGGA
TTAGCTTGATTCCATTGGTTGTTGAATGTTGAGAGATAGTGACTGAAAATAACTGCAAGATTGTACACCTCTTCTACATT
GGTTGTTGAATGTTGAGAGATGGTGACTGAAAATAACTGCAAGATTGTACTCCCTCCGATTCATATTACTTGTCGCTCAA
ATGGAAGTATCTAGACGTCCTTTTCTAAAAAAAAAATGGAAGTATCTAGACGTACTTCAGTGCTAGATACATCCATTTGA
GCGACACGAAATATGGATCAGAGGGAGTTTCTACATTTGTTGATGCTATTAGATCGGACACAAGCCGTGCAGTGCTACTT
TTGTTGCTCTATTGATGAGTTGCAATTTGTGGAAGAGGTTAGCAAATGGTGTACACTGTACTGATCTTCCATTTCAGGAA
GAACGCGAAATTAAGTGACGCTGTTCGAATCGAGCTAGCTACCCATGATATGGTCCATCCAGGTCTATCATTGATAGTAT
GTTGTGCAGCTCCTTTCAATCCATCTGTCTATCATTAATTCCCATCTAGCTTAGGCAAACCTGCATAAGCAAAATAGTCC
AAAAATTGTTTATCGTATTTATCGCAAT--AATTATTAACTGACAAAATTATTGACATCTTGTGCTTGAATCTTGATTAC
GAATAGCTTTTATTTTCTGAAACAATATATGTTTTGTGCTAATTTGCGTGTCATGCAAAAACTATCATGTCATATTTTGT
TGTTTTTCTATTTGACACTGGCCTACAGATATGAATTCATTATAGTTAGTTATATGAGTTTACCGTGTATCAGAGTTATT
ATAT-GACCTATCCCTATCCAATTGCACTAATTTATAGCAACACCATGTCCATATGGATCAGGTTATTACGGTGCTTTGC
TTCTTCTGGAGCAGGGAGGAACACAACCGATTTTTATCATCAGAAACCAATCAAAATATAGTTGTCAGTGCATTTCATAC
AGCCATAGCGTCACTGATTTTCAGTCTTCGGATTTCTGATGGTCTAAGGCGTCTAGAAAAGGAGGATACACTATATCTCC
GAAGTACATGTGAAGTTTTCTTAACCGCAGACTGAAGAGTTGCCATGTAAAAGTTTTTTGCCGAACATAAAACTATCAAT
TCTAGGAGCACCATCTGATGAAATCAGGGATTTCTGCGCTTTCCTTCCCTGTACATACACAATCTGCTTGCCTACAAAAT
GAAGGTCAGGATGAGTGAATGGCTGTATCAGCCGGGAGCAGCACTTCCTTCATGGAATGTAAATTATGAGCTTCCACATA
CACATCTCCTCCAAAGTGTAAAGGCTGCCTGAAATGCTGCATTGTTACCGTTATGCGACGTACATCATGTTATGCCTATA
TAGACCTGTTATAATGTTCCCCCCTGTTTGCTCTCAGTTTTCGTTGTTACTAGGGAGTGGTTGCAGTTTGAAA
>chr4A_1139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GCACCGGAGCCCACGACGCGCGCCATGGGGTCCGTGTCCTTGAAATTGCTGGCGGCCC
GCCGCCGGCACGGCCGGGCCCTCTCCTGCCTCTACCCACCG------------------ATGCTGCTCTCCCTCCTCTCC
ACCAACCTTCTCGTCTTCT---------TCCCGCCCCCTCCCCGACACGACCCAGCCACCGGCATCTCCTCCGCCTCC--
----TCCAACCTCTCCGCGCACGTCACCGCCATCACGCGCGAGATCGGCGGCG---CCTCCTCCTCCGGTTCCCGCCTCC
CGGGCGGCCTGCCCCGGGAGCTGCTGCTCTTCCCCACCCAGCACGCGCTCCCGCTCGGCCGCGACGCGCGGACGGGGCTC
CCCCACATGCTGGCCTCCG-------------------------------------------------------------
----------------------------------------------------------------------CTGCCCCGCC
GCTGGTGCCTCTGCTGCGGGCTCCGCGCCCTACTACCGGCCTCCGGCATGGGCCTCGATCACCGCCGCTGGGCGGGCCCT
CCAC---GCGGCGGCCATAAGTTCCTCGTCGACGATGTGCTGCGCCTAAGCGCATGCAAGATCCGGATCGGCTTCGATAT
CGCCGGCGGCGCCGCCAACTTCGCCGCCCGAACGAGGGACCGGG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS--------------------S---S--S--SS--SSSSSSS-------S--S---------
--------------S--S---------------------S----S----S-------------S----------------
----------------------------------S-----SS--------------------------------------
---S---------------------------------------------------------------------------S
------S-----------------------S-------------------------------S----------------S
S------------------S---------S--------------S-----------------------------------
S------------------SSS----------------------------------------------------------
----------------------------------------------------------------S---------------
------------------------------------S-S------------------------S------S-------S-
--------------------------------------------------S-----S-S---------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
----------------------------S-------------------------------------------S-------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------S------------------S-S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--S---------------------------------
-----------------------------------------------------------------S--------------
-------------S-----------------------------S-S-----S--S------------------S------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
-----------S--S-------S---S-----------------------------------------------------
-------------------------------S-------------S----------------------------------
-----------------------S----SS-------------S---------------------------------S-S
------S----S--------------------------------------------S-----------------------
---------S----------------------------S------------S-------S----S---------------
----S---------S------S----S----S---------S--------------------------------------
------S-------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------SS-----------------------SS--------S----------------------------
-------------------------------------------------S----------------------S-------
--------------------------S----------------------------------------------
>forward_605
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ATCCCTCTCTTCCTCACCCC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>reverse_2364
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GCCACTGTGCCCTCAAATTG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_695
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TGACGTAGCTGCTCTCCTCT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2366
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CACTGTGCCCTCAAATTGTTTG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_697
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ACGTAGCTGCTCTCCTCTGT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2372
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GCCCTCAAATTGTTTGTAGCTCC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_2366
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CCTTGATCAGAGGTACGGCC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_3538
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CTCTTAACCGCAGACTGAAGAGT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
