>input_sequence_45243
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---------------------------------------------------ATGTTGTGCACAGCGACATGCCCTGATGC
TGTTCCAGATTGCATACTGGTGAGTACCACTCACCCAATTTGACTACAAATTTTGTTTTAATGCATTTT--TTCTTTCTC
AAACTTAGATATTTTT--ACTAGTACATGAGATGCTAGATAAACGTCTTAGATGCTAGTATATAAATTCACAGCTACATC
GTGACAAAATTTCAGTTCCCAACCTCTGCTTGTGGAAACAAAGAAAGAGACATTTGTGCTTGCCTTTTTAGCACCAGCAT
ATTTTTACTTTTTTTAGTGTATAAATCAGACCCTTTTCGCACCAGTACAATATTCTTCTTAATACAGACATTTCAAGGTT
ACATATTTTTAGCGCACAATCTTTTTC---ATATAGAATAAAATAGGTGGCCCTGTTCACTTTCTCATTCTTCGGCAACT
AGTAGAATGCATCACTGTTCTCTAGTACGTCAGCAAATTTGCAGCCGTGCAGTGAACCAACCAATGGAAACGAGAGCTGG
TTTGCTTTGACATCTGAGACCCCACGCGGAAGCTTAGCTAGACATCCATCCAACTATAATAAACTAGTAGTATCTCCTCT
TGGTCCTTGCGTGATAGATTGGTTTATGCCCCCC-ACCGCTTCTCTGTGACCACAAACAACTTCCTTTCCGCCAACCGCC
ATTGCAAGTTGCTATAATTGGCTGTACTTACACGTGCTTCTGGTCTGGTCATCATCTACCTTAACAAGGCAAAAGGGGAC
GAGGAGGAGGATTGGGGTGAGGAGACGGAGGAGGGGCTCACGGGGCAAGGAGGG---GGAGGGGCTGATCCGTCTGGCAT
GGGCATCGCCGGCCTCCCTTCCGACATCCTGGTGGAGGTGACTGCCAGAATCGCGGGGGAGTCGACGACGCCCCTGGACG
ACATCGTCAGCCTCAGGCGATCGTAAGTGACCAATTAATTATTCCTTTCCTTTCTGATGTTTGGCTGTGATTGTGAAATG
ATGCAAGGTGCTATATC-------ATGCGCATGTATCTCTTCAGATGCAAGGTGTTCCGCGACGCGACGGCGGCGAGGGA
GGTGGGCCGGTGCATGGCGGTGGACAGGGAGTGGCGTCTGCACTGGTGGGACAAGGAGAGGTTCCTCTCGGTGCTCGGGG
AGTGCGCGGCCACCGGCAACCCCGAAGCGTCCTACATCCTCGGCCTGGTAACATCTGAAGCACAGATAC-TATCTTACAG
AATTGCATCATGTTCAGTTGTTCACGC-GCTAACCAACCCAACTGCTACGATTCTGACATTTTCTTCCTTTGGCAGGAGG
AAATCTGCAACCATAGGGGAAAGGAGAGCGGGCTCCGGCACCTCCACCACGCCATGAAGCACGGCCATGCCGTCGCGGCC
TACACCATCGGCATGATTATGCTGCGTGACGCTTACAATATCGAAGGCATCGAGGAGGCAATGGGATATCTGGAGGGATG
CTCTGCAGCAAGAACAAAGAGCAAGATCAAGATTGCTTCCGTACGCAGAGAGGCTGCTTCGGTCATGAGAAGGCTGACGA
TGCGCCGCTGGAGGACGGCCGAGCCTGCCGCTCCCTGCGCCGACCAGCGGTGCGGGGAGATGGAGACGGCGGAGGCCTGG
GACGAGGACGACGAACAGAGGAGGTTCTGCAGCCGGCTGTGCAGATGGAAACATGAATACCGCAAATTTGTGCAGTGGAT
TTAA----------------------------------------------------------------------------
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>chr6A_1_TraesCS6A01G095200
TCCCTC-CCTCACTCCTTTCCCAACAGTGACCTGCAACCGTGCTGGCCAGCGACGTCCTCCACTCCCGCCCCCCTCGGCA
AGCGTGTCCAGCCTGCCGCTGGTGCCGTCCTCATGGTGTCCATCTTCCTCTGCCCCTTGCACCTACCATCTTGCCTCCAT
GGATGGGTCCCCTCCTAAGCTTCGATTCCTCAGGCTGTCTGCAACTCTTCGCAGCATCCTCTGCCCTCCCATGACTGCCA
T------GGAATCCATCGGGAAGCTCCATTTTGAAGACCGCCTCAAATTCCTGCTGCCTTATCTAGAGGAGATGGGGTCC
ATGGCTGTTTTACTGAATCCAGCAGCAAGCTCCATCTCAATATTCCCCTTGGCCTCTCGTTGCCGGCTCACTGTCGGATT
TAGAGGAGATGGGAGCCACAGAGCAACCAGATGCGGATGAGATGTGGATCGCAGAATGAGTTTGGATGGCCTTGGATGGT
AATTCTAATCTCTGGGAAGAAATTGTGATGGGGATCCCATGCTCAGGCTGTGGCATTGAGGTCGAATCCATGTGGCAAAG
AAAGGCAAGGAAGAGAGGTGAGAGAGGGAGGAAGAGACTGTGCTGCCATGATTGAGGAAAATGAGGTCAGTGGAGGGAGG
AGAAGAGCAAGGAAGAAGGCATGGGCATTTTGGTCTGAAATTTTGCATAATGGCATCTTCAGGAGTATTGCAATGTTGTG
GTGTCATTTTCTCAAAGAGCAAAATAGTGATGGCATTTCTCTGAATCGCCAAAGTTGCAATGTCATATATCTAAGTTTCC
CAATTTACCCGCTTTATGCCCGAGTGCTACTGATCAGGAACCAATGTTCCACACTGTTCTGAGATGTGAACTAGTATGCC
TGCAGTACTATATAAAGAACAGTTTGATTCGTACAGCCTACATAAAATTGTTCTGAACAATCCT----TTTTTTGCTTGC
TGCTGTATAGAGAGAAGATTCACTGGTGATTTGGAGTAGTTGCTGTCACGAATGTTGTGCACAGCGACATGCCCTGATGC
TGTTCCAGATTGCATACTGGTGAGTACCACTCACCCAATTTGACTACAAATTTTGTTTTAATGCATTTT--TTCTTTCTC
AAACTTAGATATTTTT--ACTAGTACATGAGATGCTAGATAAACGTCTTAGATGCTAGTATATAAATTCACAGCTACATC
GTGACAAAATTTCAGTTCCCAACCTCTGCTTGTGGAAACAAAGAAAGAGACATTTGTGCTTGCCTTTTTAGCACCAGCAT
ATTTTTACTTTTTTTAGTGTATAAATCAGACCCTTTTCGCACCAGTACAATATTCTTCTTAATACAGACATTTCAAGGTT
ACATATTTTTAGCGCACAATCTTTTTC---ATATAGAATAAAATAGGTGGCCCTGTTCACTTTCTCATTCTTCGGCAACT
AGTAGAATGCATCACTGTTCTCTAGTACGTCAGCAAATTTGCAGCCGTGCAGTGAACCAACCAATGGAAACGAGAGCTGG
TTTGCTTTGACATCTGAGACCCCACGCGGAAGCTTAGCTAGACATCCATCCAACTATAATAAACTAGTAGTATCTCCTCT
TGGTCCTTGCGTGATAGATTGGTTTATGCCCCCC-ACCGCTTCTCTGTGACCACAAACAACTTCCTTTCCGCCAACCGCC
ATTGCAAGTTGCTATAATTGGCTGTACTTACACGTGCTTCTGGTCTGGTCATCATCTACCTTAACAAGGCAAAAGGGGAC
GAGGAGGAGGATTGGGGTGAGGAGACGGAGGAGGGGCTCACGGGGCAAGGAGGG---GGAGGGGCTGATCCGTCTGGCAT
GGGCATCGCCGGCCTCCCTTCCGACATCCTGGTGGAGGTGACTGCCAGAATCGCGGGGGAGTCGACGACGCCCCTGGACG
ACATCGTCAGCCTCAGGCGATCGTAAGTGACCAATTAATTATTCCTTTCCTTTCTGATGTTTGGCTGTGATTGTGAAATG
ATGCAAGGTGCTATATC-------ATGCGCATGTATCTCTTCAGATGCAAGGTGTTCCGCGACGCGACGGCGGCGAGGGA
GGTGGGCCGGTGCATGGCGGTGGACAGGGAGTGGCGTCTGCACTGGTGGGACAAGGAGAGGTTCCTCTCGGTGCTCGGGG
AGTGCGCGGCCACCGGCAACCCCGAAGCGTCCTACATCCTCGGCCTGGTAACATCTGAAGCACAGATAC-TATCTTACAG
AATTGCATCATGTTCAGTTGTTCACGC-GCTAACCAACCCAACTGCTACGATTCTGACATTTTCTTCCTTTGGCAGGAGG
AAATCTGCAACCATAGGGGAAAGGAGAGCGGGCTCCGGCACCTCCACCACGCCATGAAGCACGGCCATGCCGTCGCGGCC
TACACCATCGGCATGATTATGCTGCGTGACGCTTACAATATCGAAGGCATCGAGGAGGCAATGGGATATCTGGAGGGATG
CTCTGCAGCAAGAACAAAGAGCAAGATCAAGATTGCTTCCGTACGCAGAGAGGCTGCTTCGGTCATGAGAAGGCTGACGA
TGCGCCGCTGGAGGACGGCCGAGCCTGCCGCTCCCTGCGCCGACCAGCGGTGCGGGGAGATGGAGACGGCGGAGGCCTGG
GACGAGGACGACGAACAGAGGAGGTTCTGCAGCCGGCTGTGCAGATGGAAACATGAATACCGCAAATTTGTGCAGTGGAT
TTAACGATTTGATTCATTAGTAGGCTGTCGGCCACTCTGCCGGCAGTAAAAGTTGTGAGACACAATTTCAGATTTATCAC
TTTATGCTTCTCCAATTCTAGATCTGCGATCCCAATTTTTCTCGTTCCTATC--GAAGCTGGCTTAG-CACTTTGCCATC
CCC----GGTGGTTAGGTAGTGATATTTTCTTGCGGGTCACTGGCTTGCGTGTATC-TTTTTGGGGCTGCGATATGCTTG
TATTTTGTGACATCGGTGCTTTTATTTCGGCCATTTTTGTGAATACTGACAAATCCCTGCC------CCAACTCATTGTA
GTGTCTCGAAGAGTACTTTTAGATCAGTTTTTCATATTCTTCAGCGGTTTGTGTCAATGAAAATGGGGTAGAGGTTATGA
ACCTCTCCCACGAGAGTATCATGGAGGGGCTGTTTTGTCACACTTGCATCGCCAGGAGGTGATGCGGTGGACGCATGATG
GTGGGTCCCCTGCAGCCAGTTGGCATGGGCCCACCAGTCAGGCCAGGCGGACAAGTGGAGCGCGGCTATATAGCCAGCTG
TAGGCCAGTAGACAGGGCATGTGATGTGTAATCTCTAA-ACTGAAC-CTCTCCCCACCTAATCTGTACCTCCTCCCTTGG
CGAGAACCTTCTTCCCCAAGTCTTGATCTCATCCCC-T-TTCCC-CTCCCATCCAATCCTGCGAGGATGAGTTCGTGACA
GTTGGTAATCAGAGCTCAGGTTTTG-CCCC-AGAAAT--T---TCGTTG------CCCTCATATCCTCTCGATCCTGCCG
TAACATCCATCGCTGCGGGTGCGGTCTTGCTTCGGCGAGATCCGCTCGAAATCCCCAGCGGGGTTGGCCTGATTTGGAGC
AAGAGCGACGGCGCCGCCCAGCAAACCTTCCGCCCAGACCCGTCACATCATCACCGCCATGTCGGAATCCACGGGAGAGC
TCAAAACCATGCTGCAGGCGCTCTTGAAGCGCTTCGATGAGACCACGCTCGCGAGCGACAAGCAGCGCGAGGCCCA
>chr6B_1
TCCCTC-CCTCACTCCTTTCCTAACAGTGACCTGCAACCGTACTGGCCAGCGACGTCCTCCACTCCCGTCCCCCTCAGCA
AGTGTGTCTTGCCTGCCGCTGGTGCCGTCCTTGTGTTGTCCATCTTCCTCTGTCCCTTGCACCTACCATCTTGCCTCCAT
GGATGGGTCCCCTCCTAAGCTTCGATTCCTCAGGCTGTCTGCAGCTCTTCGCAGCATCCTCTGCCCTCCCATGACTGC-A
T------GGAATCCATCGGGAAGCTCCATTTTGAAGACCGCCTCAAATTCCTGCTGCCTTATCTAGAGGAGATGGGGTCC
ATGGCTGTTTTACTGAATCCAGCAGCAAGCTCCATCTCAATATTCCCCTCAGCCTCCCGTTGCCGGCTCACTGTCGGATT
TAGAGGAGATGGGAGCCACAGAGCAACCATATGCGGATGAGATGTGGATCACAGAATGCGTTCGGATGGCCTTGGATGGT
AATTCTGATCTCTGGGAAGAAATTGTGATGGGGATCCCATGCTCAGGCTGTGGCATTGAGGTCGAATCCATGTGGCAAAG
AAAGGCAAGGAAGAGAGGTGAGAGAGGGAGGAAGAGACTGTGCTGCCATGGTTGAGGAAAATGAGGTCAGTGGAGGGAGG
AGAAGAGCAAGGAAGAAGGCATGGGCATTTTGGTCTGAAATTTTGCATAATGGCATTTCCAGGAGTATTGCAACGCTGTA
GTGTCATTTTTCTAAAGAGTAAAATAGTGATTGCATTTCTCTGAATCGCCAAAGTTGCAATGGCATATATCTAAGTTTCC
CAATTTACCCGCTTTATGCCCGAGTGCTACTGATCAGGAACCAACGTTCCACACTGTTCTGAGATGTGAACTAGTATGCT
TGCAGTACTATATAAAGAACAGTTTGATTCATACAGCCTAAATAAAATCGTTCTGAACAATCAT----TTTTTTGCTTGT
TGCTGTATAGGGAGAAGATTCACTGGTGATTTGGTTTAGTTGCTGTCACGAATGTTGTGCACAGCGACATGCCCTGATGC
TGTTCCAGATTGCATACTGGTGAGTACCCCTCACCCAATTTGACTACCAATTTTGTTTTTATGCATTTT--TTCTTTCTC
AAACTTAGATA--TTT--ACTAGTACATGAGATGCTAGATGAACGTCTTAGACGCTAGTATATAAAATTACAGCTACATC
GTGACAAGATTTCAGTTCCTAATCTCTGCTTGTGGAAACAAA--AAGAGATATTTGTGCTTGCCTTTTTAGCACAAACAT
ATCTTTAT---------TGTATAAATCAGACCCTTTTCTCACCAATACAATATTCTTCCTAATACAGACATTTCAAGGTT
ACATATTTTTAGCGCACAACCTTTTCATATATATAGAATAAAATAGGTGGCCTTGTTCACTTTCTCATTCTTCGACCAC-
--TAGAATGCATCACTGTTCTCTAGTAGGTCAGCAAATTTGCAGCCGTGCAGTGAACCAACCAATGGAAACGAGAGCTGG
TTTGCTTTGACATCTGAGACCCCACGCGGAAGCTTAGCTAGACATCCATCCAACTATAATAAACTAGTAGTATCACCTCT
TGGTCCTTGCGTGATAGATTGGTTTATGCCCCCCCACCGCTTCTCTGTGACCACAAACAACTTCCTTTCTGCCAACCGCC
ATTGCAAGTTGCTATAATTGGCTGTACTTACACGTGCTTCTGGTCTGGTCATCATCTACCTTAACAAGGCAAAAGGGGAC
GAGGAGGAGGATTGGGGTGAGGAGACGGAGGAGGGGCTCACGGGGCAAGGAGGAGGAGGAGGGGCTGATCCGTCAGGCAT
GGGCATCGCCGGCCTCCCTTCTGACATCCTCGTGGAGGTGACTGCCAGAATCGCCGGGGAGTCAACGACGCCCCTCGACG
ACATCGTCAGCCTCAGGCGATCGTAAGTGACCAATTAATTGTTCCTTTCCTTTCTGATGTTCGCGTGTGATTGTGAAATG
ATGCAAGGTGCTACATC-------ATGCGCATGTATCTCTTCAGATGCAAGGTGTTCCGCGACGCGACGGCGGCGAGGGA
GGTGGGCCGGTGCATGGCGGTGGACAGGGAGTGGCGTCTGCACTGGTGGGACAAGGAGAGGTTCCTCTCGGTGCTCGGGG
AGTGCGCGGCCACCGGCAACCCCGAAGCATCCTACATCCTCGGCCTGGTAATGTCTGAAGCACGGATACCCATCTTGCAG
AATCGCATCATGTTCAGTTTGTTCACTTGCTAACCAACCCAGCTGCTACAATTCTGACATTTTCTTCCTTCGCCAGGAGG
AGATCTGCAACCGTAGGGGAAAGGAGAGCGGGCTCCAGCACCTCCACCGTGCCATGAAGCACGGCCATGCCGTTGCGGCC
TACACCATCGGCATGATTATGCTGCGCGACGCGTACAATCCCGAAGGTATCGAGGAGGCAATGGGATATCTGGAGGGATG
CTCTGCAGCAAGAACAAAGAGCAAGATCAAGATTGCCTCCGTTCGCAGAGAGGCCGCTTCGGTCATGAGAAGGCTGACGA
TGCGCCGCTGGAGGACGGCCGAGCCTGCTGCGCCCTGCGCCGACCCGCGGTGCGGGGAGATGGAGACGGCGGAGGCCTGG
GACGAGGACGACGAACAGAGGAGGTTCTGCAGCCGGCTGTGCAGATGGAAACATGAATACCGCAAATTTGTGCAGAGGAT
TTAACGTTTTGATTCATTAGTAGGCTGTCGGCCACTGTGCCGGCAGTAAAAGTTGTGAGACACAATTTCAGATTTATCAC
TTTATGCTTCTCCAATTCTAGATCTGCCATCCCAATTTTTCTCATTCCTATT--AAAGCTGGCTTAGGCACTTTGCCATC
CCC----GGTGGTTAGGTAGTGATATTTTCTTGTGGGTCACTGGCTTGCGTGTATC-TTTTTGGGGCTGCGATATGCTTG
TATTTTGTGACATCAGTGCTTTTATTTCGGCCATTTTTGTGAAAACTGTCAAATTCCTGCC------CCAACTCATTGTA
GTGTCTCGAAGAGAACTTTTAGGTCAGTTTTTCATATTTTTCAGCGGTTTGTGTCAATGAAAATGGGGTGGAGGTTATGA
ACCTC-CCCACGAGTGTATCATGGAG------------------------------------------------------
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>chr6D_1
TCCCTCACCTCACTCATTTCCCAACAGTGACCTGCAACCGTGCTGGCCAGCGACGTCCTCCACTCCCGCCCCC-TCAGCA
AGCGTGGCTGGCCTGCCGCTGGTGCTGTACTCATGTTGTCCATCTTCCTCTACCCCTTGCACCTACCATCTTGCCTCCAT
GGATGGGTCCCCTCCTAAGCTTCGATTCCTCAGGCTGTCTGCAACTCTTCGCAGCATCCTCTGCCCTCCTATGACTGCCA
TGGATGGGGAATCCATCAGGAAGCTCCATTTTGAAGACCGCCGCAAATTCCTGCTGCCTTATCTAGAGGAGATGGGGTCC
ATGGCCGTTTTACTG-ATCCAGCAGCAAGCTCCATCTCAATATTCCCCTCAACCTCTCGCTGCCGGCTCACTGTCGGATT
TAGAGGAGATGGTAGCCACAGAGCAACCAGATGTGGATGAGATGTGGATCGCAGAATGAGTTTGGATGGCCTTGGATGGT
AGTTCTGATCTCTGGGAAGAAATTGTGATGGGGATCCCATGGTCAGGCTGTGGCATGGAGGTCGAATCCATGTGGCAAAG
AGAGGCAAGGAAGAGAGGTGACAGAGGGAGGAAGAGACTGTGCTGCCATGGTTGAGGAATATGAGGTCAGTGGAGGAAG-
--AAGAGCAAGGAAGAAGGCATGGGCATTTTGGTCTGAAATTTTGCATAATGGCATCTCCAGGAGTATTGCAACGTTGTA
GTGTCATTTTTCCAAAGAGTAAAATAGTGATGGCATTTCTCTGAATTGCCAAAGCTGCAATGTCATATATCTAAGTTTCC
CAAGTTACCCGCTTTATGCCCGAGTGCTACTGATCAGGAACCAATGTTCCACACTGTTCTGAGATGTGAACTAGTATGCT
TGCAGTACTATATAAAGAACAGTTTGATTCGTACAGCCTAAATAA-ATTGTTCTGAACAATCCTCTTTTTTTTTGCTTGT
TGCCGTGTAGAGAGAAGATTCACTGGTGATTTGGAATAGTTGCTGTCACGAATGTTGTGCACAGCGACATGCCCTGATGC
TGTTCCAGATTGCATACTGGTGAGTACCTCTCACCCAATTTGACTACCAATTTTGTTTTTATGCATTTTCTTTCTTTCTC
AAACTTAGATA--TTTTTACAAGTACATGAGATGCTAGATAAACGTCTTAGATGCTAGTGTATAAAAGCACAGCTACATC
GTGACAAAATTTCAGTTCCTAACCTCTGCTTGTGGAAACAAA--AAGAAACATTTGTGCTTGCCTTTTTAGCACAAACAT
ATTTTTA---------GTGTATAAACCGGACCCTTTTCTCACCAATACAATATTCTTCTTA----AGACATTTCAAGGTT
ACATATTTTTAGCGCACAACCTTTTCATATATGTAGAATAAAATAGGTGGCCTTGTTCACTTTCTCATTCTTCGGCCAC-
--TAGACTGCATCACTGTTCTCTAGCACGTCAGCAAATTTGCAGCCGTGCAGTGAACCAACCAATGGAAACGAGAGCTGG
TTTGCTTTGACATCTGAGACCCCACGCGGAAGCTTAGCTAGACATCCATCCAACTATAATAAACTAGTAGTATCTCCTCT
TGGTCCTTGCGTGATAGATTGGTTTATG-CCCCCCACCGCTTCTCTGTGACCACAAACAACTTCCTTTCCGCCAACCGCC
ATTGCAAGTTGCTATAATTGGCTGTACTTACACGTGCTTCTGGTCTGGTCATCATCTACCTTAACAAGGCAAAAGGGGAC
GAGGAGGAGGATTGGGGTGAGGAGACGGAGGAGGGGCTCACGGGGCAAGGAGGAGGAGGAGGGGCTGATCCGTCAGGCAT
GGGCATCGCCGGCCTCCCTTCTGACATCCTCGTGGAGGTGACTGCCAGAATCGCCGGGGAGTCGACGACGCCCCTGGACG
ACATCGTCAGCCTCAGGCGATCGTAAGTGACCAATTAATTGTTCCTTTCCTTTCTGATGTTCGCCTGCGATTGTGAAATG
ATGCAAGGGGCTATATCATGATTCATGCGCATGTATCTCTTCAGATGCAAGGTGTTCCGCGACGTGACGGCGGCCAGGGA
GGTGGGCCGGTGCATGGCGGTGGACAAGGAGTGGCGTCTGCACTGGTGGGACAAGGAGAGGTTCCTCTCGGTGCTCGGGG
AGTGCGCGGCCACCGGCAACCCCGAAGCGTCCTACATCCTCGGCCTGGTAACGTCTGAAGCACGGATAC-CATCTTACAG
AACTGCATCATGTTCAGTTGTTCACGC-GCTAACCAACCCAACTGCTACGATTCTGACATTTTCTTCCTTTGGCAGGAGG
AAATCTGCAACCGGAGGGGAAAGGAGAGCGGGCTCCGGCACCTCCACCGCGCCATGAAGCACGGCCATGCCGTCGCGGCC
TACACCATCGGCATGATTATGCTGCGCGACGCCTACAATCCCGAAGGTATCGAGGAGGCAATGGGATATCTGGAGGGATG
CTCTGCAGCAAGAACAAAGAGCAACATCAAGATTGCCTCCGTACGCAGAGAGGCCGCTTCGGTCATGAGAAGGCTGACGA
TGCGCCGCTGGAGGACGGCCGAGCCTGCCGCGCCCTGCGCCGACCCGCGGTGCGGGGAGATGGAGACGGCGGAGGCCTGG
GACGAGGACGACGAACAGAGGAGGTTCTGCAGCCGGCTGTGCAAATGGAAACATGAATACCGCAAATTTGTGCAGTGGAT
TTAACGATTTGATTCATTAGTAGGCTGTCGGCCACTCTGCCGGCAGTAAAAGTTGTGAGACACAATTTCAGATTTATCAC
TTTATGCTTCTCCAATTCTAGATCTGCCATCCCAATTTTTCTCCTTCCTAATGGAAAGCTCGCTTAG-CACTTTGCCATC
CCGGTCAGGTGGTTTGGTAGTGATATTTT-----------CTGGCTTGCGTGTATTTTTTTTGGGGCTGCGATATGCTTG
TATTTTGTGACATCAGTGCTTTTATTTTGTCCATTTTTGTGAATACTGACAAATTCCCGCCCAACAGCCAACTCATTCTA
GTGTCTCGAAGAGTACTTTTAGGTCAGTTTGTCATATTTTTTAGCGGTTTGCATCAATG-AAATGGGATGGAGGTTATGA
ACCTCTCCCACGGGAGTATCATGGAG------------------------------------------------------
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>chr3A_3111
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-----------------------------------TGTCACACCTGCATCGCCAGGAGGTGATGCAGTGGACGCGTGATG
GTGGGTCCCCTGTGGCCAGTTGGCACGGGCCCACCAGTCAGGCCAGGCGGACAAGTGGAGCACGGCTATATAGCCAGCTG
TAGGC-AGTAGACAGGGCACGTGATGTGTAATCTCTAA-ATTGAAC-CTTTCCCCACCTAATCTGTACCTCCTCCCTTGG
CGAGAACCTTCTCCCCCAAGTCTCGATCTCATCCTC-T-TCCCCTC-CCGATCCAATCCTGCGAGGATGAGTTCATGACG
GTTGGTAATCAGAGCTCAGGTTTTG-CCCC-AGAAAT--T---TCGTTG------CCCTCATATCCTCTCGATCCCGCTG
TAACATCCACCGCGCCGGGTGCGGTCTTGCTCCGGCGAGATCCGCTCGAAATCCCCAGCGGGGTTGGCCTGATTTGGAGC
GAGGGCGACGGCGCCGCCCAGCAAACCTTCCGCCCAGACCCGTCATATCATCACCGCCATGTCGGAATCCACGGGAGAGC
TCAAAACCATGCTGCAGGCGCTCTTGAAGCGCTTCGATGAGACCACGCTCGCGAGCGACAAGCAGCGCGAGGCCCA
>chr5A_3111
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-----------------------------------TGTCACACCGGCATCGCCAGGAGGTGATGCGGTGGACGCGTGATG
ATGGGCCCCCTGCGGCCAGTTGGCACAGGCCCACCAGTCAGGCCAGGCGGACAAGTGGAGCACGGCTATATAGCCAGCTG
TAGGCCAGTAGACAGGGTAGGTGATATGTAATCTCTAA-ACCGAAC-CTCTCCCCACCTAATCTGTACCTCCTCTCATGG
CGAGAACCTTCTCCCCCAAGTCTCGATCTCATCCCCTT-TCCCCTC-CCGATCCAATCCTGCGAGGATGAGTTCGTGACA
GTTGGTAATCAGAGCTCAAGTTTTG-CCCC-AGAAAT--T---TCGTTG------CCCTCATAGCCTCTCGATCCCGCCG
TAACATCCACCGCTGCGGGTGCGGTCTTGCTCCGGCGAGATCCGCTCGAAATCCCCAGCGGGGTTGGCCTGATTTGGAGC
GAGGGCGACAACGCCGCCCAGCAAACCTTCTGCCCAGACCCGTCACATCATCACCGCCATGTCGGAATCCACGGAAGAGC
TCAAAACCATGCTGCAGGCGCTCGTGAAGCGCTTCGATGAGAACACGCTCGCGAGCGACAAGCAGCGCGAGGCCCA
>chr5A_3111
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-----------------------------------TGTCAAACCTGCATCGCCAGGAGGTGATGCGGTGGACGCGTGATG
GTGGGTCCCCTTCGACCAGTTGGCACGGACCCACCAGTCAGGCCAGGCGGACAAGTGGAGCACCGCTATTTAGCTAGCTG
TTGGCCAGTAGACAGGACATGTGATTTATATACTGAAT-TCTGAAC-CTCT-CCTACCTAATCTGTACCTCCTCCCTTGA
CGAGAACCTTCTCCCCCAAGTCTCGATCTCATCCCCTT-TCCCCTC-CCGATCCAAACCTGCGAGGATGAGTTCGTGACA
GTTGGTAATCAGAGCTCAGGTTTTG-CCCCCAGAAAT--T---TCGTTG------CCCTCACATCCTCTCGATCCCGCCG
TAACATCCACCGCTGCGGGTGCGGTCTTGCTCCGGCGAGATCCGCTCGAAATCCCCAGCGGGGTTGGCCTGATTTGGAGC
AAGGGCGACGGCGCCGCCCAGCAAACCTTCCGCCCAGACCCGTCACATCATCACCGCCATGTCGGAATCCACGGGAGAAC
TCAAAACCATGCTGCAGGCGCTCTTGAAGCGCTTCGATGAGACCACGCTTGCAAGCGACAAGCAGCGCGAGGCCCA
>chr5A_3111
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-----------------------------------TGTCACACCTGCATCGCCAGGAGGTGATGCGATGGACGCGTGATG
GTGGGTCCTCTCCGGCCAGTTGGCACGGGCCTACCAGTCAGGCCAGGCGGACAAGTGGAGCATCGCTATTTAGCCAGCTG
TTGGCCAGTAGACAGGGCATGTGAATTGTATACTGAAT-TCTGAAC-CTCT-CCCACCTAATCTGTACCTCCTCCCTTTG
CGAGAACCTTCTCCCCTAAGTCTCGATCTCATCCCCTT-CCCC-TC-CTAATCCAATCCTGCGAGGATGAGTTCGTGACA
GTTGGTA-TCAGAGCTCAGGTTTTGGCCCCCAGTAAT--T---TCGTTG------CCCTCACATCCTCTCGATCTCGCCG
TAACATCCACCGCTACGGGTGCGGTCTTGCTCTGGCGAGATCCGCTCGAAATCCCCAACGGGGTTGGCCTGATTTGGAGC
GAGGGCGACGGCGCCGCCCAGCAAACATTCCGCCCAGACCCGTCACATCATCACCGCCATGTCGGAATCCACGGGAGGGC
TCAAAACCATGCTGCAGGCGCTCTTGAGGCGCTTCGACGAGACCACGCTTGCGAGCGACAAGCAGCGCGAGGCCCA
>chr2B_3111
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-----------------------------------TGTCACACCTGCATCGCCAGGAGGTGATGTGGTGGACGCGTGATG
GTGGGACCC-CTCGGCCAGTTGGCACGGACCCACCGGTCAGGCAAGGCGGACAAGTGGAGCGCGGCTATTTAGCCAGCTG
TAGGCCAGTAGGCAGGGCATGTGATGTGTATGATGTATCTCTGAAC-CTCT-CTCGACTAATCTGTACCTCCTCCCTTGG
AGAGAACCTTCTCCCCCAAGTCTCGATCTCATCTCCTT-CCC--TCTTTGATCCGATCCCGCGATGATGAGTTCATGACA
TTTGGTAATCAGAGCTCAGGTTTTG-CCCACCCAAAT--T---TTC----GTTGCCCCTCATATCCTCTCGATCCAGCCG
TAACATCCACCGCTGCGGGTGCGGTCTTGCTCCGACGAGATCCGCTCGAAATCCCCAGTGGGGTTGGCCTGATTTGGAGC
GAGGGCGACGGCGCCGCCTAGCAAACCTTCCGCCCAGACTCGTCACATCATCACCGCCATGTCGGAATCCACGGGAGAGC
TCAACACCATGTTGCAGGCGCTCTTGAAGCACTTCGATGAGACCACACTGGCGAGCGACAAGGAGCGCGAGGCCCA
>chr5D_3111
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-----------------------------------TGTCACACCTGCATCGCCAGGAGGTGATGCGGTGGACGCGTGATG
GTGGGACCC-CTCGGCCAGTTGGCATGGACCCACCGGTCAGGCAAGGCGGACAAGTGGAGCGCACCTATTTAGCCAGCTG
TAGGCCAGTAGGCAGGGCATGCGATGTGTGTGTTGTATCTCTGAAC-CTCT-CCCACCTAATCTGTACCTCCTCCCTTGG
AAGGAACCTTCTCTCCCAAGTCTCGATCTCACCCCCTT-CCCC-TCTTCGATCCAATTCTACGAGGATGAGTTCGTGACA
GTTGGTAATCAGAGCTCAGGTTTTG-CCCACCTAAAAAATTTCCCC----GTTGCCACTCATC-CCTCTCGATCGAGCAG
TAACATCCACCGCTGCGGGTGCGGCCTCGCTCCGGCGAGATCCGCTCGAAATCCCCAGCGGGGTTGGCCTGATTTGGAGC
GTGTGCGACGGCGCCGCCCAGCAAACCCTCAGCTCAAACTCGCCACATCATCACCGCCATGGCAGAGTCCACGGGAGAGC
TCAAGACGATGCTGCAGGCGCTCCTGAAGCGCTTCGACGAGACCACGCTCGCGGGCGACAAGCAGCGCAAGGCCCA
>chr3B_3111
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-----------------------------------TGTCACACCTGCATCACCAGGAGATGATGCGGTGGACGAGTGATG
GTGGGACCC-CTCGGCCAGTTGGCATGGGCCCACCTGTAAGGCAAGGCGGACAAGTGGAGCGCAGCTATTTAGCCAGTTG
TAGGCCAGTAGGCAGGGGATGCGATGTGTGCGATGTATCTCTGAAC-CTCT-CCCACCTCATTTGTACCTCCTCCCTTGA
AAAGAAACCTCTTCCCCAAGTCT---TCTCATCCCCTTCCCC--TCTTCGGTCCAATTCAGCGATGATGAGTTCATGACA
GTTGGTAATCAGAGCTCAGGTTTTG-CCAACCAAAAT--T---TTTCTTAGTTGCCACTCATC-CCTCTCGACCGAGCCG
TAACATCCACTGCTGCGGGTGCGGCCTCGCTCCGGCGAGATCCGCTCGAAATCCCCAGCGGGGTTGGCCTGATTTGGAGC
GTGTGCGACGGCGCCGCCCAGCAAACACTCGGCTCAAACTCACCACATCATCACCGCCATGACAGAGTCCACGGGAGAGC
TCAAGACGATGCTGCAGGCGCTCCTGAAGCGCTTCGACGAGACCACGCTTGCGGGGGACAAGCATCGCGAGGCCCA
>chr5A_3113
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-------------------------------------TCACACCTGCATCACCAGGAGATGATGCGGTGGACGCGTGATG
ATGGGACCCTCTCTGCCATGTGGCATGGACCCATGTATAAGGCAAAGTGGACAAGTGGAGCGCAGCTATTTAGCCAGCTA
TAGGCCAGTAGGCAGGGCACACAGTGTGTGTGATGTTA-TCTCTGAACTCT-CTCACCTAATCTGTACCTCCTCCCTTGG
AAAGAAACTCCTCTCCCAAGTCTTGATCTCATCCCCTT-TCTCCTCTTGGATTCGATCCTGCGTTAATGAGTTCGTGACA
GTTGGTAATCAGAGCT-AGATTTTG-CCCCACAAATT--TTTCTTC----GCTGCCACTCATCCTCTCTCGATCGAGCCG
CAACATCCACCGCTGCGGGTGCGGTCTTGCTCCGGCGAGACCCGCTCGAAATCCCCAGCGGGGTTGGCCTGATTTGGAGC
AAGTGCGACGACATCGCCCAACAAACCCTCTGCTCAAACTCGCCATATCATCACCGCCATGCCGGAGTCCATGGGAGAGC
TCAAGGCGATGCTGCAGGCGCTCCTGAAGCGCTTCAACGAGACCACGCTTGTGAACGACAAGCAGCGTGAGGCCCA
>chr7D_3120
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--------------------------------------------TGCATCGCCAGGAGGTGATGCGGTGGACGCGTGATG
GTGGGACCC-CCCGGCCAGTTGGCACGGGCCCACCAGTCAGGCCAGGCAGACAAGTGGAACACGGCTTTATA--------
---GCCAGTAGGCAGGGCATGTGATGTGTATGCTGTAA-TCTGAAC-CTCTCCCCAACTAATCTGTACCTCCTCCCTTGG
CGAGAACCTTCTCCCCCAAGTCTCAATCTCGTCCCCTT-CCCC-TC-CCGATCCAATCCAGCGAGGATGAGTTCGTGACA
GTTGGTAATCAGAGCTCAGGTTTTG-CCCACCAAAAT--T---TTC----GTTGCCCCTCACATCCTCTCGGTCCAGCCA
TAACATCCACCGCTGCGGGTGCGGTCTTGCTCCGGCGAGATCCGCTCGAAATCCCCAGCGGGGTTGGCCTGATTTGGAGC
GAGGGCGACGACGCCGTCCAGCAAACCTTCCGCCCAGACTCGTCATATCATCACCGCCATGTCGGAATCCACGGGAGAGC
TCAAAACCATGCTGCAGGCGCTCTTGAAGCGCTTCGATGAGACCCCGCTTGCGAGCGACAAGCAGCGCGAGGCCCA
>SNPs
----------------------------------------------------------------------------S---
--------SS-------------------------S--------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------SS-----------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
----------------------------------------------------------S--------------S-----S
----------SS-------S------------------------------------------------------------
-------------------------------------------------------------------------------S
----------------------------------------S--------------------------------------S
-----------------------------------S--------------------------------------------
----------------------------S------------------S-----------S--------------------
-----------SS-----------------------------------------------------S-------------
-------------------S----------------------SS------------------------------S-S---
-------SSSSSSSSS----------------------S-----S-----------------------------------
-------------------S-----SS-------------------------S-----------------------S--S
SS------------------------------------------------------------------------------
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-----------------------------------------------------S--------------------S-----
---------------------S--------S-----------------------S-------------------------
----------------------------------------S--------------------S-S----------------
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----------------------------------------------------S----------S------S---------
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------------S-----------------------------------S-------------------------------
--------------------------S-----S------SS------S--------------------------------
------------------------------------S-----------------S-------------------------
-------------------------------S-------------S----------------------------------
--------------------------------------------------------------------------------
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---------------------------S---------------S-------S--S-------------------------
---------------------------------S----------------------------------------------
--------------S---------------------------------------S-------------------------
----------------------S---------------S------------------------------S----------
--------------------------SSSSSSSSS--------S------------------------------S-----
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S--------S------------------------------
---------------------------------------------------------------------------S----
---------S---------------------S------------------------------------------------
---S----------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_611
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-------------------------------AAGAGACTGTGCTGCCATGA-----------------------------
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>reverse_2535
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------------------------------------------------------TGCTTCGGTCATGAGAAGGC------
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>forward_1325
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-------------------------TCAGACCCTTTTCGCACCAG-----------------------------------
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>reverse_3154
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---------------------------------TTTGTCACACTTGCATCGCC---------------------------
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----------------------------------------------------------------------------
