>input_sequence_45217
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------ATGTCGGACCGGGAG
CTCCCACCGC---TGCGATCAATCAGTATGTCCCCTGCTTCTCTC--------TCTTGCTTGC----TGCGTCTTCCTTG
TCTTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTT
CTTTGCCATGGTTTGTCTGTCTGT----GATCACTACGATCTCGAGCCTGGCCTGGAGGGGAGGAAA-----GAGCGGGA
GAAAGCAGATTTAGGTGTTGATTTGAATCGGTATTAAACTAATCGACTCGTTAAGATGCCTCCCTAGTCTTATTCGTCCT
CCGTATTTTGCTATCTCTGCCCACTGTATGACTAG-------TTTAAAGCAGCAGGCTTTGCATA---------------
-----------------------------------------TTCAACA-----AGGAAGAGTCAATATAAAGAAATTGTA
ATGAGATGAGACAGAGCTTTTGCCTCCGTTTCAAAATAAATAAATATAAATTGTAGTTTATGAAGAAAAAAAG---AGAC
CCCACCTGGGATGTGTGATA-GATCCGCACATCACGCTTACGGGGCTG--TTTGTTCCTGTGAAACTCTCCAAGTGGTTG
ATTCTAATGAGATTTTCAGACTGATCGAGTTGCTTCGAAGCAATTGTCAGCGAATCAAATGTCCATCCGCATTTCTGAAC
ATTGGGAACTCGACCGTTT----------------------TTCAGGAATTACAGGGGACGGGAGGTGCCTGTTCCGGTC
CGTCGCCTACGGGGCCTGCATAAGGAGAGGCAAGCAGTCGCCGAGCGACAGCGTCCAGAAGGAACTCGCCGACGAGCTTC
GAGCAAAGGTGACT----------TTCATCACTTGATGATTTCGTTGCATTCCATGCAATTTTAGCAAAAGAGATCGCTG
ACCCACC-GTTGTCCTGTTTCAGGTTGCAGATGAGTTCATCAAGCGAAGAGGAGATACCGAATGGTGAAGTCTTCTTTCC
TCCTCTTACCATTTGTGTACATCAGAGCCGTCT-TTTCCTGCAAAAAACCATATGCTTAAAAAAGAGAATTAAGCATGAT
CTCTTTTTTTCCCTGCAAAAAACAAAAGTAACATGATCATTTTT-TATGTGAATCTTTGGTGCGACGGATAGGTTCCTCG
AAGGCAATTTCGAGAGCTATGTGCGCAAGATGAGGAAGCCTCACGCCTGGGGAGGAGAACCTGAGCTGCTCATGTGCTCA
CATGTTCTTGGGTAGGCACCTTTCTTTCTTGCCTGCAATCAATTTGTAAGTTTATATTCTGAAATGTAATTGCTTATGAT
GAATGTCAACACTGCTTGCAGGATGCCCATCACCGTCCACATGTACACCAAGGGCGCCGATAACCCCAGGATCATAGCAG
AATATGGTCAGGAGTATGGCAAGGACAACCCGGTCCGTGTTCTTTACGACGGTTATGGGCACTACGACGCGCTGCAGCCA
TCTCTTGTAAGAACACAACCAAGACTGTAAGTTGCTAGTACAACACTGCGCAAAATCCGACAA-CATTTGGCCTACTCTT
TTGAGTTGAGGAACCAACGTTCCCTCCTGTGAATTTGCAGGAGAGGAGCGTAG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr3B_1_TraesCS3B01G426700
GAGACTAGTGCTTCGTCCCCCCCTGCTCGGTGGGGTGATGTAGGGCATTTTCCCCCTCTTTGCCGCCTTCTCATGGCACT
GTACAATGTATATATAGCCTGCCTTGTTACGAGATGCTCCTCTC-----------TTTCAGTGAAGCAACCGTTTGTTCT
CTTTTGTCGATAATACGACGACCCTCTGCATGCTCACTGACATGTGGGCTCCATG---GTCCTGTGAAGCAAATTTCGTT
CTTCAGGGAGGCTCAACTCCTCATCAAGGAGCTTTATTTATTTGTTCACGATAATCCTGCTGGTTGCTCATCCAGGTGAG
TTGGGTTCCT-TTTGTCCTGTCATTGATT---ATCGGCTGTTGA---TGCGTGAAAGGATCCAGAGGCCTCGCCGAGATA
ATGA--CACACTGACATGGCCAGGGGCCAGGGCCGACATGAAAGGATGCATGAGAGGG-AA-----AAAAAGGACTGGCT
ACCACGGCTTGCGTCTGACAGCACGAATGGTC----AGGTTCATTTTCATTCACGTGCTGTCCCGTTCGTCGCACGAGAT
GATTGTGCTTTCGTTTCGAGTTCGGCAGGA--------------------------GTCTCA-TTTCACTTGGTCGAGCG
GTTCTCA-----AGGAGGGGAACGCCAAAAAGCGCCGCTCGCTCTAAAGAG-----GATTTAATTAGATTATAGGAGGCC
CCCGGTTATTTGTGGCGGG-----AAAGCAGCCGCGGGGGCCGGGGCGGAGGGAGGG-------------GGCGTCGGCC
GTCGG-TGGGCTCGATGGGACGCGGCGGCGGCGAGGCCTAGCCTCCACCCGGCCAGCCCCGGCGGGACGAGGAGGAGAAA
GCCGGCCTGCTGAAAAGTGAATCCGATTCCACGCCCATCCCCCCCTCAACCCGCCACTTTCTGTAGTAACATTCCTGCCT
CCCTCCCTCTCGCTCTCGGCCTCGGCTTTGCTTATTATTCCTTCCACCTGCC----------TCCCCTTCGTGCCCTGGA
AGTGGA---AGGGTACGAAGAGGGCCGACCGATCGTCGTCTTCGTCGCT---GCCGGCAGGGCGGATGTCGGACCGGGAG
CTCCCACCGC---TGCGATCAATCAGTATGTCCCCTGCTTCTCTC--------TCTTGCTTGC----TGCGTCTTCCTTG
TCTTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTT
CTTTGCCATGGTTTGTCTGTCTGT----GATCACTACGATCTCGAGCCTGGCCTGGAGGGGAGGAAA-----GAGCGGGA
GAAAGCAGATTTAGGTGTTGATTTGAATCGGTATTAAACTAATCGACTCGTTAAGATGCCTCCCTAGTCTTATTCGTCCT
CCGTATTTTGCTATCTCTGCCCACTGTATGACTAG-------TTTAAAGCAGCAGGCTTTGCATA---------------
-----------------------------------------TTCAACA-----AGGAAGAGTCAATATAAAGAAATTGTA
ATGAGATGAGACAGAGCTTTTGCCTCCGTTTCAAAATAAATAAATATAAATTGTAGTTTATGAAGAAAAAAAG---AGAC
CCCACCTGGGATGTGTGATA-GATCCGCACATCACGCTTACGGGGCTG--TTTGTTCCTGTGAAACTCTCCAAGTGGTTG
ATTCTAATGAGATTTTCAGACTGATCGAGTTGCTTCGAAGCAATTGTCAGCGAATCAAATGTCCATCCGCATTTCTGAAC
ATTGGGAACTCGACCGTTT----------------------TTCAGGAATTACAGGGGACGGGAGGTGCCTGTTCCGGTC
CGTCGCCTACGGGGCCTGCATAAGGAGAGGCAAGCAGTCGCCGAGCGACAGCGTCCAGAAGGAACTCGCCGACGAGCTTC
GAGCAAAGGTGACT----------TTCATCACTTGATGATTTCGTTGCATTCCATGCAATTTTAGCAAAAGAGATCGCTG
ACCCACC-GTTGTCCTGTTTCAGGTTGCAGATGAGTTCATCAAGCGAAGAGGAGATACCGAATGGTGAAGTCTTCTTTCC
TCCTCTTACCATTTGTGTACATCAGAGCCGTCT-TTTCCTGCAAAAAACCATATGCTTAAAAAAGAGAATTAAGCATGAT
CTCTTTTTTTCCCTGCAAAAAACAAAAGTAACATGATCATTTTT-TATGTGAATCTTTGGTGCGACGGATAGGTTCCTCG
AAGGCAATTTCGAGAGCTATGTGCGCAAGATGAGGAAGCCTCACGCCTGGGGAGGAGAACCTGAGCTGCTCATGTGCTCA
CATGTTCTTGGGTAGGCACCTTTCTTTCTTGCCTGCAATCAATTTGTAAGTTTATATTCTGAAATGTAATTGCTTATGAT
GAATGTCAACACTGCTTGCAGGATGCCCATCACCGTCCACATGTACACCAAGGGCGCCGATAACCCCAGGATCATAGCAG
AATATGGTCAGGAGTATGGCAAGGACAACCCGGTCCGTGTTCTTTACGACGGTTATGGGCACTACGACGCGCTGCAGCCA
TCTCTTGTAAGAACACAACCAAGACTGTAAGTTGCTAGTACAACACTGCGCAAAATCCGACAA-CATTTGGCCTACTCTT
TTGAGTTGAGGAACCAACGTTCCCTCCTGTGAATTTGCAGGAGAGGAGCGTAGCTAACCGGAGAATGACGCGGTCGCGCT
ATGTAAGCTTCTTCTACTACTTCTTCTACTACTACAACA---------------CTGCAACTTGGTTTCGTTCGAGTTGG
CAGATCGCGGTATAGCACATATGGAAGTCCAGCCCGGGTTCGCTGCTCTGTCGTTCGATCTTCTTCGAGGCTGATGTATA
---AATAAGCTTCGCGTGTGTAACTCCTGATCCAGTCAGGGAATTTAACTGCATAAACTTACACTGCGTTCAGCTTAAAA
TGGAGTGTTTTGTGTAAATTCTGGAATATTTTACTCTGAAAGCTT-GCTGATGGACATTTGATTCGCTGACAATTGCTTC
GAAGCAACTGAATTCTCACGGCAAATGC------------------------GAATACAATCTTATCTTGTTATGTTGGT
CACCGATTTTCCTCTAGGATTGCTACATAGAAAACAAAATGTGTGCATAATCATCATTTGAGGGCTCTCCTTAGACTGAT
ATTTGGCCAATTTGACACATGCCTATCGAGTACTACTCCCTATGTAAACAAACATAAGGGCGTTTAGATCAATATTTTAG
TGATCTAAATGCTCTTATATTTCTTTACAGAGGGAGT------------AGTGATGATTAATAAAGGACTAGCCCGGAAC
------CACCAGAGG-AAAAAACCCAGAATTATGGGGCACGTTCAAAGGTGGCTCTTTTCTACGAAGATAGAAAAAGCTT
TGGAAGTACCTAAGTTAAAAGATCGGAGGTACCAGACAA-----------------------AAAGCTGGCTCTTTTCTA
CGAAGGTAGAAGATGCTTGGAAGTACCGGGGTCGGCAGAGTTGTTCTCAAAGAGAAACGGTGCAGAACAGGCTAGATCCC
AGCTCGGAGGTTCTGAATGGATTTGCTCGGGAGTACCGGGCCTATAATGGGACTCAAAGGGCTGAAGCAAATTGAGAAGG
GCTCGAAAGTGCCG-GAAAAAGTTATGCTCAAATGTACCAGAGCTAACAGAGATGATCTCAAAGGAAACATAGCTCGGTG
GTACCGGAGAAATTTCTTT
>chr3D_1
GAGACTACTGCTTCTTCCCCCCCTGCTCGGTGGGGTGATGTAGGGCATTTTCCCCCTCTTTGCCGCCTTCTCATGACATT
GTACAATGTATATATAGCCTGCCTTGTTACGAGATGATGCTTGTCTC-----CCTTTTCAGTCAAGCAACCGTTTGTTCT
CTCTTGTCAATTCGACGATCCTC-------TGCTCACTGATATGTGGGCCCCATGATGGTCCTGTAAAGCTATTTT-GTT
CTTGAGGGAGGCTCAGCTCCCCAGCAAGGAGATTTATTTATTTTCTCACTATAATCCCGCTGCTTGCTCATCCAGGTGAG
GTGGGTTCCTTTTTGTCCTGTCACCGATTATCATCGGCTGCTGA---TGCATGAAAGGATCCAGAGGCCTCGCCAAGATA
ACGACGCACTGACAT---------GGCAAGGGCCGGCATGAATGGATGCATGAGAGGGGAA-----AAAAAGGAGTGGCC
ACAACGGCTTGCGTCTGACAGCACGGAGGAAGGAAG-GGTTCATTTTCACTCACGTGCTGTCCCGTTCTTGGCACGGGAT
GATTGTGCTTTCGTTTCGAGTTCGGCAGGACCAGAAAATTTGCCATCATCCGTTGAGTCTCATTTTCAGTTGCTCGAGCG
GTTCTGA-----CGGAGGGGAGCACCGAAAGCCGCCGCTGGCTCCGAAGGG-----GATTTAATTAGGA--------GCC
CCCGGTTACTTGTGGCGGG-----AAGCCAGCCGCGGAGGGAG----GGAGGGAGGG-------------GGCGTCGGCC
GTCGGGTCGGTTCGATGGGACGCGGCGGCGGCGAGG----GCCTCCACCCAGCCAGCCCCGGCGGC--------------
---------CTGAAAAGTGAATCCGATTCCATGCCCGTCCCCCCCTCAACCCGCCACTTTCTGTAGCAACATTCCTGCCT
CCCTC----TCGCTCTCCGTTTCTGCTTTGCTTATTATTCCTTCCACCCGCTTGCTTCCCCTTCCCCTCCCTGCCCTGGA
AGAGGAGGAGGGCAAGGAAGAGGGCCGACCCATCGTC---------------------------GATGTCGGACCGGGAG
CTCCCGCCGCCGCTGCGATCCATCCGTACGCCCTCTGTCTCTCCA--------GCTTGATTATCGCATGCATGCTCCTTG
TCCTT----ATGAAAAGGGGAATTGTTTTGATGATGATCATGACAAAAAGAGAGTTTCTTCTTCTTCCTTTTTGCTTC--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TTTCGCCATAATTTGTG----TGTCTGCGATCAGTACGGTCTCGAGCCTGGTCTAGAGGGGAGGAAATTAAAGAGCGGGA
GAAAGAGGATTTAGGTGTTGATTTGAATCGGTACTAAACTAATCGGCTAGTTAAGATGCCTCCCTGGTCTTATTCGCCTT
CCATATTTTGCTATCTCTGTCCACTGTACGACTAG-------TTTAAAGCAGCAGTCTTTGCATAACTGGGTATCTATCC
----------------ATCTATGTATCTCTTTTGAGGCTTTGACATATTCACCAGGAAGATCAATATGT-----------
------------------------------------------------AACTATAATTTATGAAC-GAAAAAAGGATGAC
CCCACCTGCGATGTGTGCTA-GTACCGCGCATCACGCTTACGTTTTTTTTTTGGTTCCTCTGAAACTCTCCAGGTGGTTG
ATTCTGATGTGGTTTTCAGACTGATCGAGC-----------------------------TGGCCATCTTAGTTTCTGAGC
ATTGGAAACTGAACTTATGCAGTTATGCTGCCCTTGACATCTTCAGGAATCACAGGGGACGGGAGATGCCTGTTCCGGTC
CGTGGCTTACGGCGCCTGCATAAGGAGAGGCAAGCAGTCGCCGAGCGACAGCGTCCAGAAGGAACTCGCCGACGAGCTTC
GAGCAAAGGTGGCTACGCAACCGGTTCATCACTTGATGATTCCGTTCCGTTCCATGCAATTTTAGCAAAAGAGATTGCTG
ACCCACCTGTTGGCCTGTTTCAGGTTGCAGATGAGTTCATCAAGCGAAGAGGAGATACCGAATGGTGAAGTCTTCTTTCC
TCCTCTTACCATTTGTGTACATCAGAGCCGTTTGTTTCATGCAAAAAAACATGTGCTTAAAAAAGAGAATTAAGCATGAT
CTCTTTTTTTCCCTGC-AAAAACAAAAGTAACATGATCATTTTTCGATGTGAATCTACGGTGCGAT-GATAGGTTCCTCG
AAGGCAATTTCGAGAGCTATGTGCGTAAGATGAGAAAGCCTCATGCCTGGGGTGGAGAACCTGAGCTGCTCATGTGCTCC
CACGTCCTTGGGTAGCCACCTTTCTTTCTTA-TGT-AATCAATTCGTAGGTTTATATTCTGAAACGCAATTGCTTACAAG
GAATGTCAACGCTGCTTGCAGGATGCCCATCACCGTCCACATGTACACCAAGGGCGCCGATAACCCCAGGATCATAGCAG
AGTATGGCCAGGAGTACGGCAAGGACAACCCGGTCCGTGTTCTATACGACGGTTATGGGCACTACGACGCGCTGCAGCCA
TCTCTTGTAAGAACACAACCAAGACTGTAAGTTACTAGTACAACACTGCGCAAAATCCGACAAACATTTGGCCTATTCTT
TTGAGTTGAGGAACCAACGTTCCCTCCTGTGGATTTGCAGGAGAGGAGCGTAGCTAACCGGAGAATGA------CGCGCT
ATGTAAGCTTCTTCTACTACTTCTCTAGGGCCGCCGCATAAACTCCGACATCTGCTGCAACTTGGTTTCGTTCGAGTTGG
CAGATCGCGGTATAGCACATATGGAAGTTCAGCCCGGGTTCGCTGCTCTGTCGTTCGATCTTCTTCGAGGCTGACGTATA
---AATAAGCTTCGCGTGTGTAACTCCTGATCCAGTCAGGGAATTTAACTGCATAAACTTACACTGCGTCCAGCTTAAAA
TGGAGTGTTTTGTGTAAATTCTGGAATGTTTTATTCTGAAAGCTT-GCTGATGGACATATGATTCGCCGACAATTACTTC
GAAGCAACTGAATTCTCACGGCGAATGTGAATACAATCTTTTTCCAGAGTGTGAATACAATCTTATTTTGTTATGTTGGC
CGCTGATTTTCCTCTAGGATTGGTACATAGAAAATAAAATGTGTGCATAATCATCATTTGAGGGCTCTCCTTAGACTGAT
ATTTGGCCAATTTGACACATGCCTATCCAGTACTGGTGAAC---------------------------------------
------------------------------------TACTAACCAACACAGTGACGATTAGTAAAGAACTAGCCCGGAAT
CGGAATCACCAGAGG-AAAAACCCTAGAACTATGGGGCACGTTCAAAGGTGGCTCTTTTCGACGAAGATAGAAGATGCTT
------------------------GGAAGTACCAGACAA-----------------------AAAGGTGGCTCTTTTCTA
CGAACATAGAGGATGCTTGGAAGTACCGGGGTCGGCAGAGTTGTTCTCAAAGAGAAACGGCGCAGAAAAGGCTAGATCCC
AGCTCGGAGGTTCCGAATGGATTTGCTCAGGAGTACTGGACCTATAATGAGACTCAAAGGGCTGAAGCAAATTGAGAAGG
GCTCGAAAGTGCCAGGAAGAAGTTATGCTCAAATGTACAAGAGCTAACAAAGATGATCTCAAAGGAAACATAGCTCGATG
GTACCGGAGAAATTTCT--
>chr3A_1
GAGACTACTGCTTCTTCCCCCCCTGCTCGGTGGGGTGATGTAGGGCATTTTCCCCCTCTTTGCCGCCTTCTCATGACACT
GTACAATGTATATATAGCCTGCCTTGTTACGAGATGATGCCTCTCTTCCCTTCCTTTTCAGTCAAGCAACCGTTTGTTCT
CTTTTGTCAACACGACGGTCCTC-------TGCTCACTGACATGTGGGCTCCATG---GTCCTGTGAAGCTAATTTCGTT
CTTCAGGGAGGCTCGACTCCTCATCAAGGAGATTTATTTACTTGCTCACGGTAATCCCGCTGCTTGCTCATCCAGGTGGG
GTGGGTTCCTTTTTGTCCTGTCACTGATTATCATCGGCTGCTGCCTCTGCGTGGAAGGACGCAGAGGCCTCGCCAAGATA
ACGA--CACTGACAT---------GGCAAGGGCCAACATGAATGGATGCATGAGACTGTGAGAGGGAAAAAGGACCGGCC
ACCACGGCTTGCGTCCGACAGCACGGAGGAAGGGCGAGGTTCATTTTCACTCACGTGCTGTCCCGTTCTCCGCACGGGAT
GATTGCG---------------CGGCAGGCGCGCGAATTTTGGCATCATCCGTCGGGTTTCA-CCTCACCTGGTCGAGCG
GCTCTCGAGGAGCGGAGCGGAGCACCGAAAGGCGCCGCTGGCTCCGGAGGGGATCTGATTTAATTAGGA--------GCC
CCCGGTTATTTGTGGCGGGAAGCCAAGCCAGCCGCGGAGGGAG----GGAGGGAGGGAGGGAGGGAGGGGGGCGTCGGCC
GTCGG-TCGGTTCGATGGGACGCGGCGGCGGCGAGG----GCCTCCACCCGGCCAGCCCCGGCGGC--------------
---------CTGAAAAGCGAATCCGATTCCACGCCCGTCCCCCCCTCAACCCGCCACTTTCTGTAGCAACATTCCTGCCT
CCGTC----TCGCTCTCCCTTCCTGCTTTGCTTGTTATTCCTTCCGCCCGCTTGCTTCCCCTCCC------TGCCGTGGA
AGAGGAGCAAGGGGAGGAAGAGGGCCGGCCCATCGCCGCCGCCGTCGCCGCCGCCGGCAGGGCGGATGTCGGACCGGGAG
CTCCCGCCGCCGCTGCGATCCATCCGTACGTCCTCTGCTTCTCTGCTTCTCTGTCTTGCTTGC----TGCGTCTTCCTCG
TCTTGGTGCATGAAAAGGGGGATTGTTTCGATGATGATCATGACAGAAACAGAGTTTTTTC--------TTTTGCTTC--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TGTTGCCATGATTTATC----TGT----GATCAGTACGATCTTGAGCCTGGTCTAAAGGGGAGGAAA-----GAGCGGGA
GAAAACAGATTTAGGCGTTGATTTGAATCGCTATTAAACTAATCGACTAGTTAAGATGCCTCCCTGGTCTTGTTCGCCTT
CCATATTTTGCCGTCTCCATGCACTGTATGACTAGTTTAAACTTTAAAGCAGCAGCCTTTGCATAACTGGGTATCTATCT
ATCTATCTATCTATATATCTATGCATCTCCTTTGACATAAATTCAACA-----AGGAAGATCAATATAT-----------
------------------------------------------------AACTGTACTTTATGAAG-AAAAAAG---TGAT
CCCACCTGGGATGTGTGCTTTGTACGGCGCATCACGCTTACGGGGCTG--TTTGTTCCTGTGAAACTCTCCAAGCGGTTG
ATTCTGATGTGATTTTCAGACTGATCGAGT-----------------------------CGGCCATCCGCATTTCTGAAC
ATTGGAAACTCGACTATTT----------------------TTCAGGAATTACAGGGGACGGGAGGTGCCTGTTCCGGTC
CGTCGCCTATGGCGCCTGCATAAGGAGAGGCAAGCAGTCGCCGAGCGACAGCGCCCAGAAGGAACTCGCCGACGAGCTTC
GAGCAAAGGTAACCACTCAACCGGTTCAGCACTTGATGATTCCGTTCCGTTCCTTGCAATTTTAGCAAAAGAGATTGCTG
ACCCACCTGTCGGCCTGTTTCAGGTTGCAGATGAGTTCATCAAGCGACGAGGAGATACCGAATGGTGAAGTCTTCTTTCC
T---------------------------------------GCAAAAAAAT------TTAAAACAGTGAATTAAACATGAT
CTTTTCTTT--CCTGC-AAAATCAAAAGTAACATGATCATTTTC-GATGTGAATCTTT--------GGATAGGTTCCTCG
AAGGCAATTTCGAGAGCTATGTGCGGAAGATGAGGAAGCCTCACGCCTGGGGAGGAGAACCTGAGCTGCTCATGTGCTCA
CATGTTCTTGGGTAGGCACCTTTCTTTACATGTGT-AATCAATTTGTAGGTTTATATTCTGAAATGTAATTGCTTACGAG
GAATGTCAACACTGCTTGCAGGATGCCCATCACCGTCCACATGTACACCAAGGGCACCGATAACCCCAGGATCATAGCAG
AGTATGGCCAGGAGTACGGCAAGGACAACCCGGTCCGTGTTCTATACGACGGTTATGGGCACTACGACGCGCTGCAGCCA
TCTCTTGTAAGAACACAACCAAGACTGTAAGTTACTAGTACAACACTGTGCAAAATCCGACAA-CATTTGGCCTACTCTT
TTGAGTTGAGGAACCAATGTTCCCTCCTGTCAATTTGCAGGAGAGGAGCGTAGCTAACCGGAGAATGGT------GCGCT
ATGTAAGCTTCTTCTACTACTTCTCTAGGGCAGCCGCATAAATTCCGACATCTGCTGCAACTTGGTTTCGTTCGAGTTGG
CAGATCACGGTATAGCACATATGGAGGTTCAGCCCGGGTTCGCTGCTCTATCGTTCGATCTTCTTCGAGGCTGATGTATA
AATAATAAGCTTCGCGTGTGTAACTCCTGATCCAGTCAGGGAATTTAACTGCATAAACTTACACTGCGTCCAGCTTAAAA
TGGAGTGTTTTGTGTAAATTCTGGAATATTTTACTCTGAAAGCTTTGCTGATGGACATATGGTTCGCCGACAATTGCTTC
GAAGCAACTGAATTCTCACGGCGAATGTGAATACAATCTTTCT-CAGAGTATGAATACAATCTTATTTTGTTATGTTGGT
CACTGATTTTCCTCTAGGATTGCTACATAGAAAATAAAATGTGTGCATAATCATCATTTGAGGGCTCTCCTTAGACTGAT
ATTTGCCCAA-TTGACACATGCCTATCGAGTATTACTCCCTCTGTAAACAAATATAAGAACGTTTAGATCAATACTTTAG
TGATCTAAATGCTCTTATATTTCTTTACGGAGGGGGTACTAACCAATACAGTGATGATTAGTAAAAGACTAGCCCGGAAC
------CAGCAGAGGAAAAAAACCCAGAACTATGGGGCACGTTCAAAGGAGGCTCTTTTCTACGAAGATAGAAGATGCTT
------------------------GGAAGTACCTGGATTAGAAGATTGGAGATACCAAACAGAAAGGTGGCTCTTTTCTA
TGAAGATAGAAGATGCTTGGAAGTACCGGGGTCGGCAGAGTTGTTCTCAAAGAGAAACGGTGCAGAAAAGGCTAGATCCC
AGCTCGGAGGTTCCGAATGGATTTGCTCGGGAGTACTGGACCTATAATGGGACTCAAAGGGCTGAAGCAAATTGAGAAGG
GCTCGAAAGTGCCGGGAAAAAGTCATGCTCGGATGTACCAGAGCTAACAGAGTTGATCTCAAAGGAAACATAGCTCGGTG
GTACTGGAGAAATTTCTT-
>SNPs
-------S------S------------------------------------------------------------S----
------------------------------------S-S--SSS------------------S-----------------
--------S---SS----SSSS-SSSSSSS----------------------------------------S---------
-------------------------------S------------S------------S----S-----------------
S----------------------S----------------S---------------------------------S-----
-S-------SSSS-SSSSSSSSSS---S--------------S------------------------------------S
-------------------------S-S-SSS-----------------S------------------S-------S---
--------------------------------------------------------------------------------
------------S--------S-S--S---S--------S----SS---S-----------------SSSSSSSSSS---
--------------------------SS---------S--SS-SSSS---------------------------------
-------S--S-------------------------SSSS-------------------------SSSSSSSSSSSSSSS
SSSSSSSSS---------------------------S-----------------------------S-------------
-----SSSS--------S-SS--S------------------------S--S----------------S-S---------
--S----------S-S--------------S-------S-SS------S-------------------------------
-----S--------------S---S---S----S----------S-----------------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
S---------S------SSSS------------S-----------------S--S-------------------------
------------------------------------------------S----------------S----------S-S-
--S----------------S-----------------------------------S------------------------
------------------------------------------------------------SSS-SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----S---------S----------S---
-----------------S----SS----S---------------------------------------------------
-----S---S--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S------------------
-----S--------SS----------------------------------------------------------------
------------S-------------------------------------------------------------------
-----------------------------------------S----S-S--------------------------S----
------------S-------------------------------------------------------------------
-------------------------------S------S---------S---S---------------------------
----------------S----------------------------S-------------------S--------------
-------------------------S------------------------------------------------------
------------------------------SSSSSS------------S---------------------------S--S
--------------------------------------------------------------------------------
-S-----S--------S--------------------------S------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------SSSSSS------
------------------------SSSSSSS-SS-SSSS-----------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------------------------------------S----------
----------------------------------------------------------S--------S------------
----------------------S----S--------------------------------------S-------------
---S------------------------------S---------------------------------------------
-----------------------------------------S----------S-----SS--------------S-----
----------------------------S-----S-------------------------S-------------------
-----------------------------S-------------------------------------------S-S----
SSSSSSSSSSSSSSSSSSSSSSSS---S--------------------------------------S-------------
-----S-------------------------------------------------------------S------------
-------------S----------------------S--S----------------------------------------
--------------------------------------------------------------------------------
------------------S
>forward_664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GGTTCTCAAGGAGGGGAACG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_1771
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ACAGAGCTTTTGCCTCCGTT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_671
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------AAGGAGGGGAACGCCAAAAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_1858
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATAGATCCGCACATCACGCT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_1056
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CCCT
GGAAGTGGAAGGGTAC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_2764
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTACGACGGTTATGGGCACT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_1089
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GATCGTCGTCTTCGTCGCT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_2999
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------ACTGCAACTTGGTTTCGTTCG---------------------
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-------------------
