>input_sequence_45195
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----------------------------------------------ATGATGCTCAAGGATTTCGCGGCAATTCAGCAGC
---------AGCAGCAGCTGGCCCTCGCCGCCGACGAGAACATGTCGAATCTCACCTCCGCCTCCGGCGACCAGACCAGC
GTCTCCTCCCACCCCCTCCCGCCTCCTTCCAAGAAGAAGCGCAGCCTCCCGGGAAATCCAGGTGAATTCTCCTTCTGATC
GACTTATTTATGCTGTTCTTGGTTATTTGGTTCTTGATCCCAAGGA-TTCATCGGTCGATCAATTCGTTTTGCGGTATAG
ACCCCGACGCGGAGGTGATCGCGCTGTCGCCGCGGGCGCTGATGGCGACGAACCGGTACGTGTGCGAGATCTGCGGCAAG
GGGTTCCAGCGGGACCAGAACCTGCAGCTGCACCGGCGCGGCCACAACCTCCCCTGGAAGCTCAAGCAGCGGAACCCCAA
CGAGGTGGTGCGCAAGAAGGTGTACGTGTGCCCGGAGCCCGGGTGCGTCCACCACGACCGCTCCCGCGCGCTCGGCGACC
TCACCGGCATCAAGAAGCACTTCAGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCGCCAAGCGCTACGCC
GTGCAGTCCGACTGGAAGGCCCACTCCAAGGTCTGCGGCACCCGCGAGTACCGATGCGACTGCGGCACGCTCTTCTCAAG
GCACG------TCTCTCCTCCGGCCTCACTCTTCTTCTTCTCCGTCCTGCGCGCGCA------TGCCACTGCGGCACTGC
CATGGCCATGCATGACACGCTGACGATGTGTGCGTGTGCGTGCATGCGTTGACTAATTGCAGGCGGGACAGCTTCATCAC
GCACAGGGCCTTCTGCGACGCGCTGGCGGAGGAGAGTGCGAGGGCCGTGG------CTGTGGCCGTGGAGGAGCAGCAGC
ATCCGGGGATGCTCTACTCGCACGGCGGAGGCGGCGGCGCTGGGTTCCAGATGCCGGCCGTGATGGACCCGTCGAGCTCG
CTCGGTGGCGGCCACGGGCTGATCCAAGAACTGTGCCTCAAGAGGGAGCGGGAGCAGCAACAGCAGCAGCAGCAGTTCGC
GCAGCCGTGGCTATCGGAGCAGC------AGCAGCTGGAGATGGGCGGCGAGGGCGCCCAGGCCATGTTCGGGACGGCCA
GGATGGAGCAGGAGTTCAACGCGAGCTCCACGCCGGAGAGCAGCACGCAGCCTGTGGGCATGAGCTTCGCGTCATTTCCC
TCGTCGT---------------C---------------GGCCGGGGCGACGGCCTCGTCTCACATGTCGGCCACCGCGCT
GCTCCAGAAGGCGGCACAGATGGGTGCAACGCTGAGCCGGCCGTCGGGCCAAGGCCAGATGGCGGCGAGCACCTT-----
----CAGCAGCAGCGTCGCCATCACCAACGTCACCAACAATGCACCTGCTGCCGCTACTAGTAGCAGCGCGGCGACAAGC
ACCGCCGTCGGCGTGGGATTCGGGCACGCGTTCGAGTCGCCGGCTCAGTTCGGAGTGGACCAGAGACCCAGTGCCAATCG
TACCGCCGGCAATGCCGGCGCCAGCGGCGGAGGTATAGGCAATGCCGGGGGCGCAAACGACGGCCTCACGAGGGACTTCC
TGGGTCTGCGGGCCTTCTCCCACGGCGACATACTCAGCATGGCAGGCTTCGATCCCTGCATGCCCACGTCGGCCTCGGCG
AGGGCGGCGTACGACCAGCAAGGGCCACAGAGCAGCAACCCATGGCATGGCTAG--------------------------
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--------------
>chr3D_1_TraesCS3D01G107300
TATCTAAACAATTTTCGGTGCAAAACAGAGCACGTCCACGCGCACACACACGCTC---CTCTGAGAAAAAAGGCGTCGCA
CAAGGATTCAAGATCCACAATTCCAGGCCTGTAGCACTGTTGCCGCCACCACACCACACCATAGCACGGCACGGCACCGC
AGAACCCACCACGGCATGGCACGGAGCAAGATCAC---CACCATTCATTATTCCTAATCCCCTGCACAGGGCGCCGAATG
GGAATGGGATTAGTGAGCAGTGGCAGAAGGTACAGCGGA-GGGGATTTCTCGAGCCCGGTGCATCAGAAGTCACACGAGA
GAGAGAGAGATAGAGAGAGGCCAAGGGAAAAGACAGCGGCCCCGGCGCCCCGTGTGGGCCGGCCGGCTCCTCCTGTTTGT
TTTTAGAGAGAGAG--------------AGAGAGAGTGGTGTGGGAGTACAGTGTGATTGCGGGCGGGCATGGAATGGAA
TGGGTGGATGGCCGCACACTTGCGCCTGCCTCCTACCCTCATCCATCCGCATCTCTCCCCCCCTCTCTCTCTCTCTCCCT
AGCAATCAACCCTAGTCTTAGCTTGGCTGACTCCTCCTACCTGGTTGGCATAGCTTATTACTAGCCTCTTCCTTCAGCCC
CACTCTACCAGCTCCCAGCGCA-----GCTCGTCGGCCGGTTGCTCCGATAGCTCAGTCGAT-----------CGCCTAC
CTCGGTTCTTGCTCGCAATAGCCGCCTCCATGGTTCCACATCAGCGAGCCTAGCAAGTTGCTGTACTACTA------GTC
CCTGGCCTCAGGATTCAAGGAGAGAGGCGTCCCCACCGCGGCTGGGCGTGGGTAGTGCAACTGCTGCAAATCTGCAAGTA
CCACCACCGCATGCAGCAGCTGCCGTCAGGTCTCAGGGCTCACATGATCGGATCGCCCGCCCGCGAGATCTGATCC----
--------------------------------------GTGTGTGTGTGTGGAGCTGATCAGGAATTCGGCAGCAGCAGC
TAGC-TGGCTGGTTGATCGATCGAGGGGGGAGAAGAGAGGATCGAGATGATGCTCAAGGATTTCGCGGCAATTCAGCAGC
---------AGCAGCAGCTGGCCCTCGCCGCCGACGAGAACATGTCGAATCTCACCTCCGCCTCCGGCGACCAGACCAGC
GTCTCCTCCCACCCCCTCCCGCCTCCTTCCAAGAAGAAGCGCAGCCTCCCGGGAAATCCAGGTGAATTCTCCTTCTGATC
GACTTATTTATGCTGTTCTTGGTTATTTGGTTCTTGATCCCAAGGA-TTCATCGGTCGATCAATTCGTTTTGCGGTATAG
ACCCCGACGCGGAGGTGATCGCGCTGTCGCCGCGGGCGCTGATGGCGACGAACCGGTACGTGTGCGAGATCTGCGGCAAG
GGGTTCCAGCGGGACCAGAACCTGCAGCTGCACCGGCGCGGCCACAACCTCCCCTGGAAGCTCAAGCAGCGGAACCCCAA
CGAGGTGGTGCGCAAGAAGGTGTACGTGTGCCCGGAGCCCGGGTGCGTCCACCACGACCGCTCCCGCGCGCTCGGCGACC
TCACCGGCATCAAGAAGCACTTCAGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCGCCAAGCGCTACGCC
GTGCAGTCCGACTGGAAGGCCCACTCCAAGGTCTGCGGCACCCGCGAGTACCGATGCGACTGCGGCACGCTCTTCTCAAG
GCACG------TCTCTCCTCCGGCCTCACTCTTCTTCTTCTCCGTCCTGCGCGCGCA------TGCCACTGCGGCACTGC
CATGGCCATGCATGACACGCTGACGATGTGTGCGTGTGCGTGCATGCGTTGACTAATTGCAGGCGGGACAGCTTCATCAC
GCACAGGGCCTTCTGCGACGCGCTGGCGGAGGAGAGTGCGAGGGCCGTGG------CTGTGGCCGTGGAGGAGCAGCAGC
ATCCGGGGATGCTCTACTCGCACGGCGGAGGCGGCGGCGCTGGGTTCCAGATGCCGGCCGTGATGGACCCGTCGAGCTCG
CTCGGTGGCGGCCACGGGCTGATCCAAGAACTGTGCCTCAAGAGGGAGCGGGAGCAGCAACAGCAGCAGCAGCAGTTCGC
GCAGCCGTGGCTATCGGAGCAGC------AGCAGCTGGAGATGGGCGGCGAGGGCGCCCAGGCCATGTTCGGGACGGCCA
GGATGGAGCAGGAGTTCAACGCGAGCTCCACGCCGGAGAGCAGCACGCAGCCTGTGGGCATGAGCTTCGCGTCATTTCCC
TCGTCGT---------------C---------------GGCCGGGGCGACGGCCTCGTCTCACATGTCGGCCACCGCGCT
GCTCCAGAAGGCGGCACAGATGGGTGCAACGCTGAGCCGGCCGTCGGGCCAAGGCCAGATGGCGGCGAGCACCTT-----
----CAGCAGCAGCGTCGCCATCACCAACGTCACCAACAATGCACCTGCTGCCGCTACTAGTAGCAGCGCGGCGACAAGC
ACCGCCGTCGGCGTGGGATTCGGGCACGCGTTCGAGTCGCCGGCTCAGTTCGGAGTGGACCAGAGACCCAGTGCCAATCG
TACCGCCGGCAATGCCGGCGCCAGCGGCGGAGGTATAGGCAATGCCGGGGGCGCAAACGACGGCCTCACGAGGGACTTCC
TGGGTCTGCGGGCCTTCTCCCACGGCGACATACTCAGCATGGCAGGCTTCGATCCCTGCATGCCCACGTCGGCCTCGGCG
AGGGCGGCGTACGACCAGCAAGGGCCACAGAGCAGCAACCCATGGCATGGCTAGTAATCAACCTCACAATCAGCTGGCTA
AGCTCACCATTGATGAACCGAACCATGTCCAGG-TTGATGATTTGATGCGGCATGCAATGGACT-AAAACATCATCAAGC
GTCCGGCATTGCTCGATCATATACTACTACAAGGTTAATCACACTGATCAGTAAGTTGGATTCAGCCTTCAGGTCGATAA
AGCAAAATCAAGTTCTTTAATTTTGCTTGCTACTCAATTTATCTTTTTTTTCTTGGAGGAGGAATGGGCTCT--------
--------------------------------------------------------------------------------
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------------------TCAGTTCACTTGCTATATATATGGAACTTGCAAATAAATTCTTGTTCATGCTATATATCATA
ATTAATCCATGTGGC-------TGTTGTAATAAAGATGATTTAGCCCTTCTTTCCATACATCTGTTACTACCAGTGTTCA
TGTCGTTTATG---TGGGTAGATAAGCAGTTTATGAGATGAATTAACGTTTACCACAGTTCTGTTTACTAGAGAATACTC
CCTGTGTCCCACAACATAAAACGTTTTTGCAAGCTAAAACAGCTTGTGAAAACATCTG----------------------
-----AATGCTGAATGCTGATATACCTGTTGTACGGCGTGAGACTTAACAAATAGACTATTAATAATAATTATTACTCCC
TCCATCCCAAAATTCTTGTCTTAGATTTGTCTAGATACCTAGGGAGTATATTTCAAACACCTTATGTAGTATATTGCATT
TGGGAGCATTTATTAACCAAGTACTCTAAAAAATGAACTGACATCTGTATATTACAGTTAAAGCAAATGTGT-TGTTAAA
TAATAAAATGTGCACTCCATGTAGGAGTGCCCTATACCCTGCACTGTTGAACAGTTGCATTCCTATTTTTCAAGTGATCA
GACCAT--------------------------------------------------------------------------
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--------------------TTTGACATTTTTGGTAGCATATACTGTATTGTTTAATTGCAGCTGATTATATCCACATCT
TGATATATCAGTAACATTTAAGCTGAAATATAACACTTTAGCAGATTGTAAGCACAACCGAAAAATATAGCTTTCCTCGA
CAATCCCTATACTA
>chr3A_1
TATCTAAACAATTTCCGGTGCAAAACAGAGCGCGTCCATGCACACCCACACACGCGCGCTCTGAGAAAAAAGGCGTCGCA
CAAGGATTCAAGATCCACAATCCCAGGCCTGTAGCACTGTTGCCGCAGCCACACCACGGCATAGCACGGCACGGCACCGC
AGAACCCACCACGGCATGGCACGGAGCAAGATCAAGATCACCATTCATTATTCGTAATCCCCTGCACAGGGCGCGGAATG
GGAATGGGATTAGTGAGCAGCGGCAGAAGGTACAGCGGGGGGGGATTTCTCGAGCCCGGCGCATCAGAAGTCACACGAGA
GAGAGAGAGG----GAGAGGCCAACGGAAAAGACAGCGGCCCCGGCGCCCCGTGTGGGCCGCCCGGCTCCTCCTGTTTGT
TTTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGTGCAGGAGTACAGTGTGATTGCGGGC---------ATGGAA
CGGGTGGATGGCCGCACACTTGCGCCTGCCTCC----CTCATCCATCCGCATCTCTCCCCCC-TCTCTCTCTC-CCCCCT
AGCAATCAACCCTAGTCTTAGCTTGGCTGACTCCTCCTACCTGGTTGGCATAGCTTAT---TAGCCTCTTCCTTCAGCCC
CACTCTACCAGCTCCCGGCACA-----GCTCGTCGGCCGGTTGCTCCGATAGCTCAGCTCAGTCGATCAGCTACGCCTAC
CTCGGTTCTTGCTCACAATAGCCGCCTCCATGGTTCCACATCAGCGAGCCTAGCAAGTTGCTGTACTTCTACTACTAGTC
CCCGGCCTCAGGACTCAAGGAGAGAGGCGTCCCCACCGCGGCTGGGCGTGGGTAGTGCAACTGCTGCGAATCTGCAAGTA
CCA---CCGCATGCAGCAGCTGCCGTCAGGCCA---GGCTCACATGATCGGATCGCCCGTCCGCGAGATCTGATCCGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGCTGATCAGGAATTCGGCGGCAGCTAG
CTGGTTGGTTGGTTGATCGATCGAGGGGAGAGAAGAGAGGATCGAGATGATGCTCAAGGATTTCGCGGCAATTCAGCAGC
AGCAGCAGCAGCAGCAGCTGGCCCTGGCCGCCGACGAGAACATGTCGAACCTCACCTCCGCCTCCGGCGACCAGACCAGC
GTCTCCTCCCACCCCCTCCCGCCTCCTTCCAAGAAGAAGCGCAGCCTCCCGGGAAATCCAGGTGAATTCTCCTTCTGATC
GACTTATTCAGCTATATAGAG---------TTCTTGATTTAGAGGATTTCATCGATCGATCAATTCGTTTTGCGGTGTAG
ACCCTGACGCGGAGGTGATCGCGCTGTCGCCGCGGGCGCTCATGGCGACGAACCGCTACGTGTGCGAGATCTGCGGCAAG
GGGTTCCAGCGGGACCAGAACCTGCAGCTGCACCGGCGCGGCCACAACCTCCCCTGGAAGCTCAAGCAGCGGAACCCCAA
CGAGGTGGTGCGCAAGAAGGTGTACGTGTGCCCGGAGCCGGGCTGCGTCCACCACGACCGCTCCCGCGCGCTCGGCGATC
TCACCGGCATCAAGAAGCACTTCAGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCGCCAAGCGCTACGCC
GTGCAGTCCGACTGGAAGGCCCACTCCAAGGTCTGCGGCACCCGCGAGTACCGATGCGACTGCGGCACGCTCTTCTCAAG
GCACGACTCTCCTTCT-------CCTCCATCTTCTTCTTCCCCGTCCTGCGCGCGCATGCCAGTGCCACTGCGGCACTGC
CATGGCCATGCATGACATGCTGACGATGTGTGCGTGTGCGTGCATGCGTTGATTAATTGCAGGCGGGACAGCTTCATCAC
GCACAGGGCCTTCTGCGACGCGCTGGCGGAGGAGAGCGCGAGGGCGGTGG------C------CGTGGAGGAGCAGCAGC
ATCCGGGGATGCTCTACTCGCAC---GGCGGCGGCGGCGCGGCGTTCCAGATGCCCGCCGTGATGGACCCGTCGAGCTCG
CTCGGTGGCGGGCACGGGCTGATCCAAGAACTGTGCCTCAAGCGGGAGCGGGAGCAGCAACAGCAGCAGCAGCAGTTCGT
GCAGCCGTGGCTATCGGAGCAGC------AGCAGCTGGAGATGGGCGGCGAGGGCGCCCAGGCCATGTTCGGGACGGCCA
GGATGGAGCAGGAGTTCAACGCAAGCTCCACGCCGGAGAGCAGCACGCAGCCTGTGGGCATGAGCTTCGCGTCATTTCCC
TCGTCGTCCGCGGCTCCCTCAGC---------------GGCCGGGGCGACGGGCTCTTCTCACATGTCGGCCACGGCGCT
GCTCCAGAAGGCGGCGCAGATGGGTGCAACGCTGAGCCGGCCGTCGGGCCAAGGCCAGATGGCGGCGAGCACCTTCAGCA
GCAGCAGCAGCAGCGCCGCCATCACCAACGTCACCAACAATGCACCTGCAGCCGCTACTAGTAGCAGCGCGGCGACAAGC
ACCGCCGTCGGCGTGGGATTCGGGCACGCGTTCGAGGCGCCGGCTCACTTCGGGGTGGACCCGAGACCCACTGCCAGTCG
TAACGCCGGCAATGCCGGCGCCAGCGGCGGAGGTAGAGGCAATGCCGGAGGCGCAAACGACGGCCTCACGAGGGACTTCC
TGGGTCTGCGGGCCTTCTCCCACGGCGACCTACTCAGCATGGCAGGCTTCGATCCCTGCATGCCCACGTCGGCCTCGGCG
AGGGCGGCGTACGATCAGCAAGGGCCCCAGAGCAGCAACCCATGGCATGGCTAGTAATCAACCTCGCAATCAGCTGGCTA
AGCTCACCATTGATGAACCCAACCATATCCAAG-TTGATGATTTGATGCGGCGTGCAATGGACT-AAAACATCATCAAGC
GTCCGGCATTGCTCGATCATATACCACTTCAAGGTTAATCACACTGATGAGTAAGTTGGATTCAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTCAGTTCACTTGCTATATATATGGAACATGCAAATAAATTCTTGTTCGTGCTATATATCATA
ATTAATCCATGTCGC-------TGTTGTAATAAAGAAGATTTG--------------------------------GTTCA
TGTCGTTTGTCTGCTGGGTAGATAAGCAGTTTATGAGATGAATTAGCGTTTACCACAGTTCTGTTTACTAGAGAGTACTC
CCTCCGCTCCATAACATAAAACGCTTTTACAAGCTAAAACAACTTGTGGAAACATCTTATATTATTATTATGGGATGGAG
GGAGTAATTCTTAATGCTGATATACTTGGTGTACGGCGTGAGACTTAACAAATAGACTATTAATAAGAGTTT--------
----------------------------------------------TATATTTCAAACACCTTGTGTAG--TATTGCATT
TGGGAGCATTTTTTAACCAAGTACTCTAGAAAATGAACTGACATCTGTATATTACAGTTAAAGAAAACACTGCTGTTAAA
TAATAAAGTGTGCACTCCATGTAGGAGTGCCCTATACCGTGCACTGTTGAACAGTGGCATTCCTATTTTTCAATTGATTA
GAACATTTGAGACGGAGGGAGTAATTCTGATCGCCGATATGTCTGTTGTACGACGTGAGACTTAACAAATAGACTGTTAA
TAGAAGAGTAATTATATTCCAAACACCTTGTGTAGTATTGCATTTGGGAGCATTTGTTAACCAAATACTCTAAAAAATGA
ACTGACATCTGTATATTACAACATCTGTGTATTACTACAAGTTATTAAAGAAAACACGGGTGTTAAATAATAAACAGTGT
TGCTAAAGCACATCTAGATGTGCCATAAGTATTGCACATCTAAGTCCTATATCATTGATCTTACGTTGAGATTCGTGTGG
ATATTTTCTTTTTCTTTTTTCTTTTTCTCTTCATACTTGATTCACTCACTTAGATGTGCAATAAGTAGGGCACATCTAGA
TGTGCCCTAGACATTCCCAATAATAAAATGTGCACTCCATGTAGGAGTGACCTATACCATGCACTGTTGAACAGTAGCAT
TCCTATTTTTCATCAGAGCATTTGACACTTCTGGTAGCATAT-----ATTGTTCAATTGCAGCTGATTATAACCACATCT
TGATATATCAGTAACATTTAAGCTGAATTATAACACTTTAGCAGATTACAAGCGCCACCCAAAAAT--------------
--------------
>chr3B_43
------------------------------------------CACACACACACTC---CTTTGAG-AAAAAGGCGTCGCA
CAAGGATTCAAGATCCACAATTCCAGGCCTGTAGCACTGTTGCCGCCACCACAGCACGGCA----------CGGCACGGC
TGAACCCACCACGGCATGGCATGGAGCAAGATCAC---CACCATTCATTATTAGTAATCCCCTGCATAGGGCGCGGAATG
GGAATGGGATTAGTGAGCAGTGGCAGAAGGTACAGCGGA-GGGGATTTCTCGAGCCCGGTGCATCAGAAGTCACACGAGA
GATATAGAGAGAGC--GAGGCCAACGGAAAAGACAGCGGCCCCGGCGCCCCGTGTGGGCCGG-------CTCCTGTTTGT
TTTTAGAGAGAGAGAGAGAGAGGGAGAGTA--------GTGTGGGAGTACAGTGTGATTGCGGGC---------ATGGAA
TGGGTGGATGGCCGCACACTTGCGCCTGCCTCC----CTCATCCATCCGCATCTCTC------------TCTCTCCCCCT
AGCAATCAACCCTAGTCTTAGCTTGGCTGACTCCTCCTACCTGGTTGGCATAGCTTATTAGCTC---CTTCCTTCAGCCC
CACTCTACCAGCTCCCAGCGCAGCGCTGCTCGTCGGCCGGTTGCTCCGATAGCTCAGTCGAT-----------CGGCTAC
CTCGGTTCTTGCTCACAGTAGCCGCCTCCATGGTTCCACATCAGCGAGCCTAGCAAGTTGCTGTGGTGCTACTACTAGTC
CCA-GCATCAGGATTCAGGGAGAGAGGCGTCCCCACCGCGGCTGGGCGTGGGTAGTGCAACTGCTGCAAATCTGCAAGTA
CCACCACCGCATGCAGCAGCTGCCGTCAGGTCA---GGCTCACATGATCAGATCGCCCGCCCGCGAGATCTGATCCGTGT
GCGTATGTCCT------------------------------------------GCTGATCAGGAATTCGGCAGCAGCTAG
CTA----GCTGGTTGATCGATCGAGGGGAGAGAAGAGAGGATCGAGATGATGCTCAAGGATTTCGCGGCAATTCAGCAGC
AGCAGCAGC---AGCAGCTGGCCCTCGCCGCCGACGAGAACATGTCGAACCTCACCTCCGCCTCCGGCGACCAGACCAGC
GTCTCCTCCCACCCCCTCCCGCCTCCTTCCAAGAAGAAGCGCAGCCTCCCGGGAAATCCAGGTGAATTCTCCTTCTGATC
GACTA---TATGCTGTTCTTGGTTATTTGATTCTTGATTTAGAGGATTTCATCCATCGATCAATTCGTTTTGCGGTATAG
ACCCTGACGCGGAGGTGATCGCGCTGTCGCCGCGTGCGCTCATGGCGACGAACCGGTACGTGTGCGAGATCTGCGGCAAG
GGGTTCCAGCGGGACCAGAACCTGCAGCTGCACCGGCGCGGCCACAACCTCCCCTGGAAGCTCAAGCAGCGGAACCCCAA
CGAGGTGGTGCGCAAGAAGGTGTACGTGTGCCCGGAGCCCGGGTGCGTCCACCACGACCGCTCCCGCGCGCTCGGCGACC
TCACCGGCATCAAGAAGCACTTCAGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCGCCAAGCGCTACGCC
GTGCAGTCCGACTGGAAGGCCCACTCTAAGGTCTGCGGCACCCGCGAGTACCGATGCGACTGCGGCACGCTCTTCTCAAG
GCACGTCTCTCTCTCTCCTCCGGCCTCACTCTTCTTCTCCTCCGTCTTCCGCGCTCA------TGCCACTGCGGCACTGC
CATGGCCATGCATGACACGCTGACGATGTGTGCGTGTGCGTGCATGCGTTGATTAATTGCAGGCGGGACAGCTTCATCAC
GCACAGGGCGTTCTGCGACGCGCTGGCGGAGGAGAGCGCGAGGGCGGTGGCCGTGGC------CGTGGAGGAGCACCAGC
ATCCGGGGATGCTCTACTCGCAC---GGTGGCGGCGGCGCGGGGTTTCAGATGCCGGCCGTGATGGACCCGTCGAGCTCG
CTCGGTGGCGGCCACGGGCTGATCCAAGAATTGTGCCTCAAGAGGGAGCGGGAGCAGCAACAGCAGCAGCAGCAGTTCGC
GCAGCCGTGGCTATCGGAGCAGCAGCAGCAGCAGCTGGAGATGGCCGGCGAGGGCGCCCAGGCCATGTTTGGGACGGCCA
GGATGGAACAGGAGTTCAACGCGAGCTCCACGCCGGAGAGCAGCACGCAGCCTGTGGGCATGAGCTTTGCGTCATTTCCC
TCGTCGT---------------CTGCGGCCCCGTCAGCGGCCGGGGCGACGGCCTCATCCCACATGTCGGCCACCGCGCT
GCTCCAGAAGGCGGCGCAGATGGGTGCAACGCTGAGCCGGCCGTCAGGCCAAGGCCAGATGGCAGCGAGCACCTTCAGCA
GTAGCA---GCAGCGCCGCCATCACCAACGTCACCAACAATGCACCTGCTGCCGCTACTAGTAGCAGCGCGGCGACAAGC
ACCG---TCGGCGTGGGATTCGGGCACGCGTTCGAGGCGCCGGCTCACTTCGGAGTGGACCAGAGGCCCAGTGCCAATCG
TAATGCCGGCAATGCCGGCGTCGGCGGCGCAGGTAGAGGCAATGCCGGAGGCGCAAACGACGGCCTCACGAGGGATTTCC
TGGGTCTGCGGGCCTTCTCCCACGGCGACATACTCAGCATGGGAGGCTTCGATCCCTGCATGCCCACGTCGGCCTCGGCG
AGGGCGGCGTACGATCAGCAAGGGCCGCAGAGCAGCAACCCATGGCATGGCTAGTAATCAACCTCGCAATTAGCTGGCTA
AGCTCACCATTGATGAACCGAACCATATCCAAGTTTGATGATTTGCTGCGGCATGCAATGGACTAAAAACATCATCAAGC
GTCCGGCATTGCTCGATCATATACTACTTCAAGGTTAATCATACCGATCAGTAAGTTGGATTCAGCCTTCCGGCCGATAA
AGCAAAATCAAGTTCTTTCATTTTGCTTGCCACTCATTTTATCTTCTTTTGG-----GGAGGAATGAGCTCT--------
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------------------TCAATTCACTTGCTATATATAT---------AAATAAATTCTTGTTCATGCTATATATCATA
ATTAATCCATGCATGTCTCTGTTGTAATAATAAAGATGATTTAGCCGTTCTTTACATACATATGTTACTACCAGTGCTCA
TGTCGTTTATT---TGGGTAGATAAGCAGTTTATGAGATGAATTAACGTTTACCACTGTTCTGTTTACTAGCGAAT----
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>SNPs
--------------S----------------S------S--S---------S----------------------------
---------------------------------------------------------SS---------------------
-----------------------------------------------------S--------------------S-----
--------------------------------------------------------------------------------
----------S--S----------S-------------------------------------------------------
-------------------------------------S---------------------------SSSSSSSSS------
---------------------------------SSSS-------------------------S------------S----
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------S----------------------------------------------------S------------
--S-----------------------------------------------------------------------------
--------------------------------SSSS--------------------------------------------
-----------------------------------------------------------------------------SSS
SS-S------------------------S---------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------SSSS------------S-------------------------
----S-----------------------------------S---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
------------------------------------S--------S-----------SSSSSS-----------------
-----------------------SSS--S-----------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------S----------------------------------------------------------------
---------------S----------------------------------------------------------------
------------------------------------S----------S--------------------------------
--S--------------------------------S------------S-------------------------------
--------------------------------------------------------------------------------
--------------S-----------S--------------------------------------S--------------
--------------------------S----S------------------------------------------------
----------------------------S-----------------------------------------S--S------
------------------S-----------S-----S--------S----SSSSSSS---------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
------------S---------------------------------S------S-------S------------------
----------S---------------------------------------------------------------------
---SS-SS---S-----------S----S------------S------S--------S----------------------
--------S--S-------------S--S-------------------------------------S-S--SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S-----SS---------
-----------S----------------S----------------------------------S---SSSSS--------
-------S------------------------------S----------------S-----------------S----S-
--S-----------------------------------------------------------------------------
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---------------------------S--S-----------SSSSS------S-----------------S--------
---------------------------S-------------------SS----S-S---S------SSSSSSSSSSSSSS
SSSSSSSSSSSSSS
>forward_735
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---------------------------------------------------------------------------CCTAC
CTCGGTTCTTGCTCG-----------------------------------------------------------------
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>reverse_2608
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-----------------------------------------------GTTCGGAGTGGACCAGAGAC-------------
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>forward_1365
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----------------------------------------------------------------TCGTTTTGCGGTATAG
ACCCC---------------------------------------------------------------------------
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>reverse_3706
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-------------------------CTGTTGTACGGCGTGAGACT-----------------------------------
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