>input_sequence_45120
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--------------------------------------------------------------------CGACGCCACACG
CCCAGGATGGCGACGGCGCGCCACCGCGGCATGCCGCGGCGCGAATGCAACCTGCTGATCAGGACCCTCGCGAGGCGCGG
CAGCTACGCCCGTGTCATGGCGGTCTACTACGACCTCCGCGGGCGCGGCCTCGTGGCGGACAGCTTCACCTACCCGTTCG
TGTTCAGGGCCATCGGTGCCCTCAAGCTACCGGTCGAGGGACGCAAGGCGCACGCGGCGGCCCTGAAGACCGGTTTCCGG
TGGGATGCCTACACCGCGAGCTCGCTCATGGACATGTACACGACGGTGGACCGCCCGGAAGTCGCGCGGAAGGTGTTCGA
TGAAATGCCGCAGAGGGCGCTGGTCGTGTGGAATATGATGATCAGGTGCTATGTCAGGCGCGGCCGAAACACAGAAGCGG
TTGCTTTGGCTGAGGAGATGGAAAGGGGCGGTCTAACGCCCGATAGGGTCACGCTGTTGACCGCACTCACCGCGTGCTCC
AGAGCCGGTGATCTGAGCTTAGGAAGGAGAATTCATGCCTACATGGATGGAGTCACTGGGTTCAGCCTCCCAGTTGCAAA
TGCACTGCTGGACATGTACATGAAGAATGGCTGCTTGGAAGAGGCGGTGAAGCTGTTCGAGAAAATGCCGTCGAGGAACA
TCATTTCTTGGACTATACTTGTGTCTGGATATGCCTTTGCCGGACAGGTGGACAAGGCGAGATTACTCTTCCACCAGTGC
ACAGAGAAGGATCTAATTATGTGGACTGCTATGATCAACGCGTATGCACAACATGGATGCTTCGTGGAGGCATTGTCGTT
GTTTCGAGACATGCTAATGCATCAAGTTGAGCCAGACAGGTTCACTGTTGTCACTCTCCTGACATGCTGTGCCAATCTTG
GCGCGCTCGATCAAGGTGAATGGATCCACCAGCTTGCTGAAGGTAAGAAGATGAAGCTTGATGCAGTTCTTGGCACGGCA
TTGATCGACATGTATGCCAAGTGTGGGCATGTAGAGAAGTCGGTGGAGGTCTTTGAACGAATGCAAGGCAGAGACACTAC
GGCTTGGACTGCCATTATCTGCGGCCTGGCCACAAATGGTCAGGCAGGTAGAGCCCTCGAATTGTTTGAGGGTATGGAGA
AAAGCAATGCTAAGCCTGACAGCGTTACCTTCATTGGGGTGCTGAGTGCATGTTGCCATGGTGGCTTGGTTGATGAAGGG
CGGAAACAGTTTCGTGCCATGAAGGAGGTTTATCGGATACGACCAAGAGTTGAACATTATAGTTGCCTTGTCAATCTTTT
AGGTCGTGCTGGTCAACTTGATGAAGCTGAGAAGTTGATCAAGGATATACCAATTGACAAGGACGCTATGCCACTGTTTG
GTGCACTCCTCACTGCTTGCAAGGCTCAAGGCAATGTCGAGATGAGCGAAAGGCTGACCAAACGAATAGGCAAGCAAGGC
TACCAAATTCCTGATGTGGATTTGCTCATGTCTAATGTGTATGCAACTGCAAGTCGATGGGAGGATGTATTAAGAGTAAG
GAGCAAGATGGCACACCCCAGTGTCAAGAAAAATGCAGGGTGCAGCTTGATCGAGGTGAAGGGATACTGAAAATGGCAGG
TGGCACTTGCACATCTAGTGCTTCAACATAGGAATGGCTAAAACATCCATTAGTCTGAGTAATTTTTCCTTGTGATCCAT
TGATCTG-------------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G351800
CTCGCCACGCGCAGTACCCGGAGTACCTGCACATTGGCCGCAAAAAACAAGAAAGGTGTCGTCCCTGATGAAC---TAAT
GTCCTAAGAACGAGCTGATCAACTACTGAAATGTGAGATTCTT---------------ATTCTTTGTTGTCTCCTAAATT
GCTGCCAGATCATAGGTGTCGACGAAATTTGTAACTCACCTGAGCTTGAGGTCAGGGAGGAAGCGCCGTCGGATCGACGA
AGTGCAGCCATCCGCTGCGACCAGCAAATCCCCGGCGACCTCCACCGTTTCTCCGGTTCCGAGCAGGCGAGCCGTCGCGA
CGACCCCGCCGCGTTTGCCACCATGGCCGTCCGTGTCCGAAACCTCGAACGAAAGGAACTGGTGGCCCCAGTGGACGGTC
ACCGCGGCCGGCAGAGCCTCGTGAAGCCGCCGGTGCAGCTCGCCCCAGTGCGCCGCGCGGAAGTTGAAGCCCTCGTCCCT
CGTCAGAGTCCGCGCCGCCTTCGTCTCGCTGTCCGTTGCCATGTTCTGCGGCAG-----CAACAGGGGTACTCAACCTAT
GCCCGCAAGGAAAACA---AAGAAGCCAAGCTGCGATAATAAAAAAGGAAAAGAAAAGGAAGAAGCCAAGCTTGCGATTT
ACCGGGGAGGACGGACGGGCTTACCAGGTCGACGGCGAGCGGCAGCGTGGCCGCGTCGAGACCCCACTCGGGGATCCAGC
GGGCGAGGGTCTCCATAGACTGCGCATCCAGGCCCAGCCCGGCGCCCGTGCCGCCTCCGGCCGCCGGGCCCGCCGCCTTC
TCCAACACCACCGCCTTCCACCCCGCCCCCGCCACCGCGTGCGCGCAGGCCAGGCCCGCCACGCTCCCTCCCACCACCAC
GACCACCCGCCCACCCATGTCAGGAGCCATCGTTTCTCCCAACTCCGCGGGGGCTTCTTATCGCTCACTGCTATCTGTAC
ACGGCACCTGGCTACTAAA--AGTATTCCATCTTGGCCGGCCCGCGCGCGCCTCCACGCGTCCCGCGTCGACGCCACACG
CCCAGGATGGCGACGGCGCGCCACCGCGGCATGCCGCGGCGCGAATGCAACCTGCTGATCAGGACCCTCGCGAGGCGCGG
CAGCTACGCCCGTGTCATGGCGGTCTACTACGACCTCCGCGGGCGCGGCCTCGTGGCGGACAGCTTCACCTACCCGTTCG
TGTTCAGGGCCATCGGTGCCCTCAAGCTACCGGTCGAGGGACGCAAGGCGCACGCGGCGGCCCTGAAGACCGGTTTCCGG
TGGGATGCCTACACCGCGAGCTCGCTCATGGACATGTACACGACGGTGGACCGCCCGGAAGTCGCGCGGAAGGTGTTCGA
TGAAATGCCGCAGAGGGCGCTGGTCGTGTGGAATATGATGATCAGGTGCTATGTCAGGCGCGGCCGAAACACAGAAGCGG
TTGCTTTGGCTGAGGAGATGGAAAGGGGCGGTCTAACGCCCGATAGGGTCACGCTGTTGACCGCACTCACCGCGTGCTCC
AGAGCCGGTGATCTGAGCTTAGGAAGGAGAATTCATGCCTACATGGATGGAGTCACTGGGTTCAGCCTCCCAGTTGCAAA
TGCACTGCTGGACATGTACATGAAGAATGGCTGCTTGGAAGAGGCGGTGAAGCTGTTCGAGAAAATGCCGTCGAGGAACA
TCATTTCTTGGACTATACTTGTGTCTGGATATGCCTTTGCCGGACAGGTGGACAAGGCGAGATTACTCTTCCACCAGTGC
ACAGAGAAGGATCTAATTATGTGGACTGCTATGATCAACGCGTATGCACAACATGGATGCTTCGTGGAGGCATTGTCGTT
GTTTCGAGACATGCTAATGCATCAAGTTGAGCCAGACAGGTTCACTGTTGTCACTCTCCTGACATGCTGTGCCAATCTTG
GCGCGCTCGATCAAGGTGAATGGATCCACCAGCTTGCTGAAGGTAAGAAGATGAAGCTTGATGCAGTTCTTGGCACGGCA
TTGATCGACATGTATGCCAAGTGTGGGCATGTAGAGAAGTCGGTGGAGGTCTTTGAACGAATGCAAGGCAGAGACACTAC
GGCTTGGACTGCCATTATCTGCGGCCTGGCCACAAATGGTCAGGCAGGTAGAGCCCTCGAATTGTTTGAGGGTATGGAGA
AAAGCAATGCTAAGCCTGACAGCGTTACCTTCATTGGGGTGCTGAGTGCATGTTGCCATGGTGGCTTGGTTGATGAAGGG
CGGAAACAGTTTCGTGCCATGAAGGAGGTTTATCGGATACGACCAAGAGTTGAACATTATAGTTGCCTTGTCAATCTTTT
AGGTCGTGCTGGTCAACTTGATGAAGCTGAGAAGTTGATCAAGGATATACCAATTGACAAGGACGCTATGCCACTGTTTG
GTGCACTCCTCACTGCTTGCAAGGCTCAAGGCAATGTCGAGATGAGCGAAAGGCTGACCAAACGAATAGGCAAGCAAGGC
TACCAAATTCCTGATGTGGATTTGCTCATGTCTAATGTGTATGCAACTGCAAGTCGATGGGAGGATGTATTAAGAGTAAG
GAGCAAGATGGCACACCCCAGTGTCAAGAAAAATGCAGGGTGCAGCTTGATCGAGGTGAAGGGATACTGAAAATGGCAGG
TGGCACTTGCACATCTAGTGCTTCAACATAGGAATGGCTAAAACATCCATTAGTCTGAGTAATTTTTCCTTGTGATCCAT
TGATCTGAGTTCAGATCAATTTAGCTGTGGTGAGTCAGTTCGTTAATGTAACGCCCCAAGACCGACGCTCCAGAAGCCTT
CCAGTTATTTCATTGTTGTCGTGTGATTTATTTGTTTGTTGCATTCATCATCGCATCATCCGCATTGCATCCGCATGTTT
TCATAAAACTCGTGGTCCGTTCGTAGTTGCCGCTTCTTCATCGCCTCCGTTGACCTTTCTCAGTCCAGCCGTTCTTTTGT
GGTCCGGCCGTTTGGCCCTTTCTGCACAGTGCACTGACCTCCTCGTGCACGTCCGAGAT-TTCCCCGAACCCGACCTGCT
CAGTCATCACCGTTGGGTCCGGATTATCCCCAAACATCTATATAACAACTCCGTTTTCTTAATTGGACTCCCTAACCTA-
TTTTATTCCGGACCGTCCGATCGTGATCGGAGGATCCAAATCATCACCCATTTCG-----TATATATATAGGCAGTCAAA
CCCTAGCCCTAGCATGTCCAATCCATCCAAATCCTCTTCACCGCCGCCACCCTACCTGCCTCTCCTCGATCTCTCCACCA
GGCCAACCAGTGCGCTAGGACAAGGCTCCTCCTTCCTCGGGATCTTGCCCGATCCAAATCCAGCCACCACCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCAACCACAGCCGCGGCCTCCACTCCGAAGCCCCGAGCAGCCAGCTCCCTCGACCGC
GTCCAACTCCAGGACATCCTCGCGCCGCTGACCTTCCATCGATCCAAGCCGTCTGTGCCCCTTCCTCCTCTACCCCGACC
TCGCGCAGCTCACACCTCTGGCCATCCCCGTCGAACCGTCGGCGACCTCCAGCAGGACCGCGCCCTTCCTCTCCAACCTC
CCGTCGTCCAGGAGCACGAGCTCCATCACCTCGATGCCACTAGCCGGAGCATCCCCATCGCCGGCCTCCAGGACCTCTGC
TCCTCCTCTCTGTCTTCTTCTCCTCCCTCTCTCGATTTCTTTCTCTCTCATGCA
>chr7A_1
CTCGCCATGCGCAGTACCCCGAGTACCTGCACATTGGCCGCAAAAACAAGAAACGGTGTCGTCTGTGATGAACTTATAAT
GTCCTAAAGACGAGCTGATCAACTACTGAAAAC--------------------GTGAGATTCTTTGTTGCCTCCTAAATT
GCTGTCAGATCATAAGTGTCGAAGAGATTTGTAACTCACCTGAGCTTGAGGTCAGGGAGGAAGCGCCGGCGGATCGACGA
CGTGCAGCCATCCGCCGCGACCAGCAAATCCCCGGCGACCTCCACCGTTTCACCGGTTCCGAGCAGGCGAGCCGTGGCGA
CGACCCCGCCGCGTTTGCCACCACCGTCGTCCAAGTCCGACACCTCGAACGAAAGGAACTGGTGGCCCCAGTGCACGGTC
ACCGCGGCCGGCAGAGCCTCGTGAAGCCGCCGGTGCAGCTCGCCCCAGTGCGCCGCGCGGAAGTCGAACCCCTCGTCCCT
CGTCAGCGTCCGCGCCGCCTTCGTCTCGCTGTCCGTTGCCCTGTTCTGCGATTGCGGCACAACAGGGGTGCTCAACCCAT
GCCCACACCGCAAGGAACGC-----------------------------------AACGAAGAAGCAAAGCTTGCGATTT
GCC-GGGAGGACGGACGGGCTTACCAGGTCGACGGCGAGCGGCAGCGTGGCCGCGTCGAGACCCCACCCAGGGATCCAGC
GGGCGAGGGTCTCCATAGACTGCGCGTCCAGGCCCAGCCCGGCGCCCGTGCCGCCTCCGGCCGCCGGGCCCGCCGCCTTC
TCCAGCACCACCGCCTTCCACCCCGCCGCCGCCACCGCGTGCGCGCAGGCCAGGCCGGCCACGCTCCCTCCCACCACGAC
GGCCACCCGCCCACCCATCTCAGGAGCCATCGCTTCTCCCAACTCCGCGAGGGCCTCTTATCGCTCACTGCTATCTCTAC
ACGGCACCTGGCTAAAAGTGTAGTATTCCATCTTGGCCGGCCCGCGCGCGCCTCCACGCGTCCCGCGTCGCCGCCACACG
CCCAGGATGGCGACGGCGCGCCGCCGCGGCATGCCGCTGCGCGAGTGCAACCTGCTGATCAGGACCCTGGCGAGGCGCGG
CAGCCACGCCGATGTCATGGCGGTCTACTACGACCTCCGCGGACGCGGTCTCGTGGCGGACAGCTTCACCTACCCGTTCG
TGCTCAGGGCCATCGGGGTCCTCAAGGTACCCGTCGAGGGGCGCAAGGCGCACGCGGCGGCCCTCAAGACCGGTTTCCGG
TGGGATGCCTACACCGCGAGCTCGCTCATGGACATGTACACGACGGTGGACCGTCCGGAAGTCGCGCGGAAGGTGTTCGA
CGAAATGCCGCAGAGGGCGCTGGTCGTGTGGAATATGATGATCAGGTGCTATGTCAGGAGTGGCCGAAACACAGACGCGG
TTGCTTTGGCTGAGGAGATGGAAAGGGGCGGCCTCACACCCGACAGGGTGACGTTGCTGACCGCACTCACCGCCTGCTCC
AGAGCCGGTGACCTGAGCTTAGGAAGGAGAATTCATGCCTACATGGATGGAGTCACTGGGTTCAGCCTCCCAGTTGCAAA
TGCACTGCTGGACATGTACACGAAGAATGCTTGCTTGGAAGAGGCAGTGAAGCTGTTCGAACAGATGCCAGCGAGGAACA
TCATTTCCTGGACCATACTTGTGTCGGGATATGCCTTGGCCGGACAGGTGGAAAAGGCGAGATTACTCTTCCACCAATGC
ACAGAGAAGGATCTAATCATGTGGACTGCTATGATCAACGCGTATGCGCAACATGGATGCTTCGTGGAGGCATTGTCGTT
GTTTCGAGACATGCTGATGCATCAAGTTGAGCCAGACAGGTTCACTGTTGTCACTCTCCTGACATGCTGTGCCAATCTTG
GCGCGCTCGATCAAGGTGAGTGGATCCACCAGCTTGCTGAAGGTAAGAAGATGAAGCTTGATGCAGTTCTTGGCACCGCA
TTGATCGACATGTATGCCAAGTGTGGGCATGTAGAGAAGTCAGTGGAGGTCTTTGAACGAATGGAAGGCAGAGACACTAC
GGCCTGGACAGCCATTATCTGCGGCCTGGCCACAAATGGTCAGGCAAGTAGAGCCCTCGAATTGTTTGAGGATATGGAGA
GAAGCAGCGCTAGGCCTGACAGCGTTACCTTCATTGGGGTGCTGAGCGCATGTTGCCATGGTGGCTTGGTTGATGAAGGG
CGGAAACAGTTTCGTGCTATGAAGGAGGTTTATCGGATACGACCAAGAGTTGAACATTATGGTTGCCTTGTCAATCTTTT
AGGTCGTGCTGGTCAACTTGATGAAGCTGAGAAGTTGATCAAGGGTATACCAATTGACAAGGACGCTATGCCGCTGTTTG
GTGCACTCCTCACTGCTTGCAAGGCTCAAGGCAATGTCGAGATGAGCGAAAGGCTGACCAAACGAATAGGCAAGCGAGGC
TACCAAATTCCTGATGTGGATTTGCTCATGTCTAATGTGTATGCAACTGCAAGTCGATGGGAGGATGTAGTAAGAGTAAG
GAGCAAGATCGCACACCCCAGTGTCAAGAAAAATGCAGGGCGCAGCTTGATCGAGGTGAAGGGATACTGAAGATGGCAGT
TAGCACTTGCACATCTAGTGCTTCAACATAGGAATGGCTAAAACATCCATTAGTCTGAGTAATTTTTCCTAGAGATCCAT
TGATCTGAGTT---------------------------------------------------------------------
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>chr7B_3
--CGCCATGCGCAGTACCCGGAGTACCTGCACATTGGCCGCAAGAACAAGAAATGGTGTCGTCCGTGATGAAC---TAAT
GTCCTAAAAGCGAGCTGATCAACTACTGAAAATATTCGATGTAATGTTCATATGTGAAATTGTTTGTTGCCTCCTAAATT
GTTGTCTGGCCATAAGCGTCAAACAGATTTATAACTCACCTGAGCTTGAGGTCAGGGAGGAAGCGCCGGCGGATCGACGA
AGTGCAGCCATCCGCTGCGACCAGCAAATCCCCAGCGACCTCCACCGTTTCACCGGTTCTGAGCACGCGAGCCGTCGCGA
CTACCCCGCCGCGTTTGCCACCATCGCCGTCCGTGTCCGAAACCTCGAACGAAAGGAACTGGTGGCCCCAGTGCACGGTC
ACCGCGGCCGGCGGAGCCTCGTGAAGCCGCCGGTGCAGCTCGCCCCAGTGCGCCGCGCGGAAGTTGAACCCCTCGTCCCT
CGTCAGCGTCCGCGCCGCCTTCGTCTCGCTGTCCGTTGCCATGTTCTGCGGCAG-----CAGCAGGGGTACTCAACCTAT
GCCCACAAGGAAAACAAGGAAGAAGCCAAGCTGCGATAATAA-----------------AAAAAGCCAAGCTTGCGATTT
ACCGGGGAGGACGGACGGGCTTACCAGGTCGACGGCGAGCGGCAGCGTGGCCGCGTCGAGACCCCACCCGGGGATCCAGC
GGGCGAGGGTCTCCATAGACTGCGCATCCAGGCCCAGCCCGGCGCCCGTGCCGCCTCCGGCCGCCGGGCCCGCCGCCTTC
TCCAACACCACCGCCTTCCACCCCGCCCCCGCCGCCGCGTGCGCGCAGGCCAAGCCCGCTACGCTCCCTCCCACCACGAC
GGCCACCCGCTCACCCATCTCAGGAGCCATCGTTTCTCCCAACTCCGCGGGGGCTTCTTATCGCTCACTGCTATCTGTGC
ACGGCACCTGGCTACTAAA--AGTCTTCCATCTTGGCCGGCCCGCGCGCGCCTCCACGCGTCCCGCGTCGCCGCCACACG
CCCAGGATGGCGACGGCGCGCCACCGCGGCATGCCGCTGCGCGAATGCAACCTGCTCATCAGGACCCTCGCGAGGCGCAG
CAGCTACGCCGATGTCATGGCGGTCTACTACGACCTCCGCGGGCGCGGCCTCGTGGCCGACAGCTTCACCTACCCGTTCG
TGCTCAGGGCCATCGGTGCCCTCAAGCTACCGGTCGAGGGGCGCAAGGCGCACGCTGCGGCCCTGAAGACCGGTTTCCGG
TGGGATGCCTACACCGCGAGCTCGCTCATGGACATGTACACGATGGTGGACCGCCCTGAAGTCGCGCGGAAGGTGTTCGA
TGAAATGCCGCAGAGGGCGCTGGTCGTGTGGAATATGATGATCAGGTGCTATGTCAGACGTGGCCGAAACAGAGAAGCGG
TTGCTTTGGCTGAGGAGATGGAGAAGGGCGGTCTCACACCCGATAGGGTGACGTTGCTGACCGCACTCACCGCGTGCTCC
AGAGCCGGTGATCTGAGCTTAGGAAGGAGAATTCATGCCTACATGGATGGAGTCACTGGGTTCAGCCTCCCAGTTGCGAA
TGCACTGCTGGACATGTACATGAAGAATGGCTGCTTGGAAGAGGCGGTGAAGCTGTTTGAAAAAATGCCGTCGAGGAACA
TCATTTCGTGGACTATACTTGTGTCGGGATATGCCTTTGCCGGACAAGTGGAGAAGGCGAGAGTACTCTTCCACCAGTGC
ACAGAGAAGGATCTAATTATGTGGACTTCTATGATCAACGCGTATGCACAACATGGATGCTTCGTGGAGGCATTGTCGTT
GTTTCGAGACATGCAGATGCATCAAGTTGTGCCAGACAGGTTCACTGTTGTCACTCTCCTGACATGCTGTGCCAATCTTG
G---------------TGAATGGATCCACCAGTTTGCTCAAGGTAAGAAGATGAAGCCTGATGCAGTTCTTGGCACTGCG
TTGATTGACATGTATGCCAAGTGTGGGCATGTAGAGAAGGCAGTGGAGGTCTTTGAACGAATGGAAGGCAGAGACACTAC
GGCCTGGACTGCCATTATCTGCGGCCTGGCCACAAATGGTCAGGCAGGTAGAGCCCTCGAATTGTTTGAGGATATGGAGA
GAAGCAATGCTAAGCCTGACAGCGTTACCTTCATTGGGGTGCTGAGTGCATGTTGCCATGGTGGCTTGGTTGATGAAGGG
CGGAAACAGTTTCGTGCCATGAAGGAGGTTTATCAGATACGACCAAGAGTTGAACATTATAGTTGCCTTGTCAATCTTTT
AGGTCGTGCTGGTCAACTTGATGAAGCTGAGAAGTTGATTAACAATATACCAATTAACAAGGACGCTATGCCACTGTTTG
GTGCACTCCTCACTGCTTGCAAGGTTCAAGGCAATGTCGAGATGAGTGAAAGGCTGACCAAACGAATAGGCAAGCAAGGC
TACCAAATTCCTGATGTGGATTTGCTCATGTCTAATGTGTATGCAACTGCAAGTCGATGGGAGGACGCAGTAAGAGTAAG
GAGCAAGATGGCACACCCCAGTGTCAAGAAAAATGCAGGGTGCAGCTTGATCGAGGTGAAGGGATTCTGAAAATGGCAGT
TGGCACTTGGACATCTAGTGCTTCAACATAGGAATAGCTAAAACATCCATTAGTCTGAGTAATTTTTCCTTGTGATCCGT
TGGTCTGAGTTCA-------------------------------------------------------------------
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>chr3D_2739
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----------------------------------------------TGTAACGCCCCAAGACCGACGCTCCAGAAGCCTT
CCAGTTATTTCGTTGTTGTCGTGTGTTTTATTTGTTTGTTGCATTCATCATCGCATCATCCGCATTGCATCCGCATGTTT
TCATAAAACTCGTGGTCCGTTCGTAGTTGCCGCTTCTTCATCGCCTCCGTTGACCTTTCTCAGTCCAGCCGTTCTTTTGT
GGTCCGGCCGTTTGGCCCTTTCTGCACAGTGCACTGACCTCCTCGCACGCGTCCGAGAT-TTCCCCGAACCCGACCTGCT
CATTCATCACCGTTGGGTCCGGATTATCCCCAAACATCTATATAACATCTCCGTTTTCTTAATTGGGCTCCCTAACCTA-
TTTTATTCCAGACCGTCCGATCGTGATCGGAGGATCCAAATCATCACCCATTTCG-----TATATATATAGGCAGTCAAA
CCCTAGCCCTAGCCTGTCCAATCCATCCAAATCCTCTTCACCGCCGCCACCCTACCTGCCTCTCCTCGATCTCTCCACCA
GGCCAACCAGTGCGCAAGGACAAGGCTCCTCCTTCCTCGGGATCTTGACCGATCCA-ATCCAGCCACCACCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCAGCCA--------------------------------------------------
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>chr3D_2739
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----------------------------------------------TGTAACGCCCCAAGACCGACGCTCCAGAAGCCTT
CCAGTTATTTCGTTGTTGTCGTGTGTTTTATTTGTTTGTTGCATTCATCATCGCATCATCCGCATTGCATCCGCATGTTT
TCATAAAACTCGTGGTCCGTTCGTAGTTGCCGCTTCTTCATCGCCTCCGTTGACCTTTCTCAGTCCAGTCTTTCTTTTGT
GGTCCGGCCGTTTGGCCCTTTCTGCACAGTGCACTGACCTCCTCGCGCGCGTCCGAGAT-TTCCCCGAACCCGACCTGCT
CAGTCATCACCGTTGGGTCTGGATTATCCCCAAACATCTATATAACATCTCCGTTTTCTTAATTGGGCTCCCTAACCTA-
TTTTATTCCAGACCGTCCGATCGTGATCGGAGGATCCAAATCATCACCCATTTCT-----TATATATATAGGCAGTCAAA
CCCTAGCCCTAGCCTGTCCAATCCATCCAAATCCTCTTCACCGCCGCCACCCTACCTGCCTCTCCTCGATCTCTCCACCA
GGCCAACCAGTGCGCAAGGACAAGGCTCCTCCTTCCACGGGATCTTGCCCGATCCA-ATCCAGCCACCACCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCGACCA--------------------------------------------------
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>chr5D_2739
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----------------------------------------------TGTAACGCCCCAAGACCGACGCTCTAGAAGCCTT
CCAGTTATTTCGTTGTTGTCGTGTGTTTTATTTGTTTGTTGCATTCATCATCACATCATCCGCATTGCATCCGCATGTTT
TCATAAAACTCGTGGTCCGTTCGTAGTTGCCGCTTCTTCATCGCCTCCGTTGACCTTTCTCAGTCCAGCCGTTCTTTTGT
GGTCCGGCCGTTTGGCCCTTTCTGCACAGTGCACTGACCTCCTCGCGCGCGTCCGAGAT-TTCCCCGAACCCGACCTGCT
CAGCCATCACCGTTGGGTCCGGATTATCCCCAAACATCTATATTAAGTCTCCGTTTTCTTAATTGGGCTCCCTAACCTA-
TTTTATTCCGGACCGTCCGATCGTGATCGGAGGATCCAAATCATCACCCATTTCG-----TATATATATAGGCAGTCAAA
CCCTAGCCCTAGCCTGTCCAATCCATCCAAATCCTCCTCACCGCCGCCACCCTACCTGCCTCTCCTCGATCTCTCCACCA
GGCCAACTAGTGTGCAAGGACAAGGCTCCTCCTTCCTCGGGATCTTGCCCGATCCA-ATCCAGCCACCACCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCAGCCA--------------------------------------------------
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>chr2D_2739
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----------------------------------------------TGTAACGCCCCAAGACCGACGCTCCAGAAGCCTT
CCAGTTATTTCATTGTTGTTGTGTGATTTATTTGTTTGTTGCATTCATCATCGCATCATCCGCATTGCATCCGCATGTTT
TCATAAAACTCGTGGTCCGTTCATAGTTGCCGCTTCTTCATCGCCTCCGTTGACCTTTCTCAGTCCAGTCGTTCTTTTGT
GGTCCGGCCGTTTGGCCCTTTCTGCACAATGCACTGACCTCCTCGCGCTCGTCTGAGAT-TTCCCCGAACCCGACCTGCT
CAGTCATCACCGTTGGGTCCGGATTATCCCCAAACATCTATATAACATCTCCGTTTTATTAATTGGACTCCCTAACCTA-
TTTTATTCCGGATGGTTCGATCGTGATCGGAGCATCCAAATCATCACCCATTTCG-----TATATATATAGGCAGTCAAA
CCCTAGCCCTAGCCTGTCCAATCCATCTAAATCCTCTTCACCGCCGCCACCCTACCTGCCTCTCCTCGATCTCTCCACCA
GGCCAACCAGTGCGCAAGGACAAGGCTCCTCCTTCCTTGGGATCTTGCCCGATCCA-ATCCAGCCACCGCCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCAACCA--------------------------------------------------
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>chr1D_2739
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----------------------------------------------TGTAATGCCCCAAGACCGACGCTCCAAAAGCCTT
CCAGTTATTTCGTTGTTGTCGTGTGATTTATTTGTTTGTTGCATTCATCATCGCATCATCCGCATTGCATCCGCATGTTT
TCATAAAACTCATAGTTCGTTCGTAGTTGCCGCTTCTTCATCGCCTCCGTTGACCTTTCTCAGTCTAGCCATTCTTTTGT
GGTCCGGCCGTTTGGCCCTTTCTGCACAGTGCACTGACCTCCTCGCGCACGTCTGAGAT-TTCCCCGAACCTGACCTGCT
CAGTCATCACCGTTGGGTCCGGATTATCCCCAAACATCTATATAACATCTCCGTTTTCTTAATTGGGCTCCCTAACCTTT
TTTTATTCTGGACCGTTCTATCGTGATCGGAGGATCCAAATCATCACCCATTTCG-----TACATATATAGGCAGTCAAA
CCCTAGCCCTAGCCTGTCCAATCCATCCAAATCCTCTCCACCGCCGCCACCCTACCCGCCTCTCCTCGATCTCTCCACCA
GGCCAACCAGTGTGCAAGGACAAGGCTCCTCCTTCCTCGGGATCTTGCCCGATCCA-ATCCAGCCTCC------------
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--------------CCTCGGCCCATCC-----------------------------------------------------
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>chr5D_2950
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-----------------CTTTCTCCACAGTGCAT--ACCCCCTCGTGCGCGTCCGAAACCATGCCCGAACCCGACCCGCT
CAGTCATCATTGTTGGATTCGGATCATCCCCAAACAGCTATATAACATCTCCCTTTTCTTATTTAGACTCCCTACCTA--
-TTTATTCTCGACCGTCCGATCATGATCGGAGGGACGGGATAGCCCCTACCCTAATCCCCTACCTATATAACCAGTCTAA
CCCTAGCCCTAGCCTGTCC-ATCCATCCAAATCCTCTTCACCGCCGCCACCC-ACCTGCCTCTGCTCGATCTCTCCACCG
GGCCAACCAGTGCGCTAGGACAAGGCTCCTCCTTCCTCGGGATCTTGCCCGATCCAAATCCAGCCACCATCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCAACCACAGCCGCGGCCTCCACTCCGAAGCCCCGAGCAGCCAGCTCCCTCGACCGC
GTCCAACTCCAGGACATCCTCGCGCCGCTGACCTTCCATCGATCCAAGCCGCCTGTGCCCCTTCCTCCTCTACCCCGACC
TCGCGCAGCTCACACCTCTGGCCATCCCCTTCCAACCGTCGGCGACCTCCAGCAGGACCGCGCCCTTCCTCTCCAACCTC
CTGTCGTCCAGGAGCACGAGCTCCATCGCCTCGATGCCACTAGCCGGAGCATCCCCATCGCCGGCCTCCAGGACCTCTGC
TGCTCCTCTCTGTCTTCTTCTCCTCCCTCTCTTGATTTCTTTCTCTCTCATGCA
>chr5D_2950
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-----------------CTTTCTCCACAGTGCAT--ACCCCCTCGTGCGCGTCCGAAACCTTGCCCGAACCCGACCCACT
CAGTCATCATCGTTGGATTCGGATCATCCCCAAACAGCTATATAACATCTCCCTTTTCTTATTTAGACTCCCTACCTA--
-TTTATTCTCGACCATCCGATCATGATCGGAGGGACGGGATAGCCCCTACCCTAATCCCCTACCTATATAACCAGTCTAA
CCCTAGCCCTAGCCTATCCAATCCATCCAAATCCTCTTCACCGCCGCCACCC-ACCTGCCTCTGCTCGATCTCTCCACCG
GGCCAACCAGTGCGCTAGGACAAGGCTCCTCCTTCCTCGGGATCTTGCCCGATCCAAATCCAGCCACCACCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCAACCACAGCCGCGGCCTCCACTCCGAAGCCCGGAGCAGCCAGCTCCCTCGACCGC
GTCCAACTCCAGGACATCCTCGCGCCGCTGACCTTCCATCGATCCAAGCCGCCTGTGCCCCTTCCTCCTCTACCCCGACC
TCGCGTAGCTCACACCTCTGGCCATCCCCGTCCAACCGTCGGCGACCTCCAGCAGGACCGTGCCCTTCCTCTCCAACCTC
CTGTCGTCCAGGAGCATGAGCTCCGTCGCCTCGATGCCACTAGCCGGAGCATCCCCATCGCCGGCCTCCAGGACCTCTGC
TCCTCCTCTCTGTCTTCTTCTCCTCCCTCTCTCGATTTCTTTCTCTCTCATGCA
>chr6D_2950
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------CTTTCTCCAAAGTGCAT--ACCCCCTCGTGCGCGTCCGAAACCTTGCCCGAACCCGACCCACT
CAGTCATCATCGTTGGATTCGGATCATCCCCAAACAGCTATATAACATCTCCCTTTTCTTATTTAGACTCCCTACCTA--
-TTTATTCTCGACCGTCCGATCATGATCGGAGGGACGGGATAGCCC-TACCCTAATCCCCTACATATATAACCAGTCTAA
CCCTAGCCCTAGCATGTCCAATCCATCCAAATCCTCTTCACCGCCGCCACCC-ACCTGCCTCTGCTCGATCTCTCCACTG
GGCCAACCAGTACGCTAGGACAAGGCTCCTCCTTCCTCGGGATCTTGCCCGATCCAAATCCAGCCACCACCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCAACCACAGCCGCGGCCTCCACTCCGAAGCCCCGAGCAGCCAGCTCCCTTGACCGC
GCCCAACTCCAGGACATCCTCGCGCCGCTGACCTTCCATCGATCCAAGCTGCCTGTGCCCCTTCCTCCTCTGCCCCGACC
TCGCGCAGCTCACACCTCTGGCCATCCCCGTCGAATCGTCGGCGACCTCCAGCAGGACCGTGCCCTTCCTCTCCAACCTC
CCCTCGTCCAGGAGC-CGAGCTCC--------------------------------------------------------
------------------------------------------------------
>chr6D_2950
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------CTTTCTCCACAGTGCAT--ACCCCCTCGTGCGCGTCAGAAACCTTGCCCGAACCCGACCCGCT
CAGCCATCATCGTTGGATTCGGATCATCCCCAAACAGCTATATAACATCTCCCTTTTCTTATTTAGACTCCCTACCTA--
-TTTATTCTCGACCGTCCGATCATGATCGGAGGGACGGGATAGCCC-TACCCTAATCCCCTACCTATATAACCAGTCTAA
CCCTAGCCCTAGCATGTCCAATCCATCCAAATCCTCTTCACCGCCACCACCC-ACCTGCCTCTGCTCGATCTCTCCACCG
GGCCAACCAGTGCGCTAGGACAAGGCTCCTCCTTCCTGGGGATCTTGCCCGATCCAAATCCATCCACCATCGAACCATCC
ATCTCCTCCTCCATCCAATCGAGCCAACCACAACCGCGGCCTCCACTCCGAAGCCCCGAGCAGCCAGCTCCCTCGACCGC
GTCCAACTCCAGGACATCCTCGCGCCGCTGACCTTCCATTGATCCAATCCGCCTGTGCCCCTTCCTCCTCTGCCCCGACC
TCGCGCAGCTCACACCTCTGGCCATCCCCGTCGAACCGTCGGCGACCTCCAGCAGGACCGCGCCCTTCCTCTCCAACCTC
CCCTCATCCAGGAGC-CGAGCTCC--------------------------------------------------------
------------------------------------------------------
>SNPs
-------S--------------------------------------SS-SS--S----------S---------------
-------S-----------------------SSSSSSSS-S-S--------------------------S----------
----S---------S-------S--S------------------------------------------S-----------
---------------------------------------------------S----------------------------
------------------------S------------------------------------------------S------
--------------------------------------------------------------------S-----------
------S-------------------------------------------------------------------------
----S-------------------------------------SSSSSSSSSSSSS--S----------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-S----------------S-------------------------------------------------------------
----------------------------------------------------------------------S---------
-------------------------------------S------------------------------------------
----------SS--------------------------------------------------------------------
--S-------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
----------------------------------S--S-----------S---S--S-----------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------S-----------------S--------------------------S---------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------------------S---------------------S----------------
---S-------------------------------------------------------------------S--------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------------------------------------
>forward_183
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TGCCAGATCATAGGTGTCGAC---------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>reverse_1706
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TGGATATGCCTTTGCCGGAC-----------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>forward_1203
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CTTCACCTACCCGTTCG
TGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2743
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------AGCTGTGGTGAGTCAGTTCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
