>input_sequence_45075
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----------------------------------------------------------------------------ATGA
GGTTAGTAGTCTTAATTCCTCCTTCGAGATCAATAAGAAACTGTTTGAAAGAAATGATGCATACTGACTTATTTTGGTAT
GTACGTTTTTCAGAGTGTTAGTTAGTACTCCATTACTTGGCTTGGGTTGTTTCAAATC----TTATCTCTGGGCTAGCAT
AATGATGGAGCATAAGCATTTCTCT---TTTTTTTAACCAACTTGTGAACAAGGGTTCAGCATATTTGTTTGGTGTCCTG
AGTAATACAATTGATTTTTACATTGCAACATGACATGGTAAATTAAAGTGTGTAGACAGTCTTGAACTTAATCCAGGTTT
TATAC---------------------------------------------------------------------------
---------AAAATAGTATTCTCTGTTTGAGAAACT-GGAAGGACTGATAGAGCTAATATGTCAAAGGGCTTATATTCGA
TATAAGATTCTCTATTTGGCTTTTGCATTTTATGCTACTATGAAGACATAGAAAATAGCATCGATCTGTTGCCTGCTTAA
ACACAATAAAGCCTAGCTATTGATTTCTACATGGACGTGGTATTGGAAAAAATGGGTATGATTTTGTAGTACCATTTGTA
TTTTTATATGGTTTTACATGTACGCG-ATG------TTTTTGGCGCAAATGCTGCGCTATGATCCAGAGCTAATGAAATC
AACTGAACTGGCTGCATAAGTGTGAGCTAGACCTCAACTTGCTTGATTTTGCTTCCATTATTTTGACTTTTTTCTCTTCA
GTTCCCATCGCGTGAAGTGGAATGAGGACAATCTGTATGAGATTGAATCAAACAAGCCAGTGAGGCAGAAGATAACCGAG
CCCAAGACACCGTATCACCCTATGATGGATGAAGAAGATGGTATATGTCTTGTTACTTGTATCTCATCATATCTGACCAC
TATTTGTGCTCATAATGTGCAAGCGCTGGATAATTGCTTTCATTGCTTG--CTCTCTAGGGTCACTATCACCAACACGCC
CTTTCGACAAGTGTCTAGATGAGACTGTTAGTGCTGAAGCTATATTGACTGCTTTAAATGGTGTGGCCTCTTCAAGTAAA
AATGATTCAAAGGATGATGAGTGGGCATCCTCAGATGATGATGCAGATGCCATGGAACAGGATGATGGTTGGTAGCTTCT
TTCTCAGTTACCATTTTATGTTTCTAGAGTTGCTAGAGTAAATTAGTAATTACTGATGTTCAATATATTTGACTAGCTGA
GTTATGCGACTTGATTTTATGGTATCAGCTTTCTGTAATGAAGTCCATAAGTGATCCAACTATATGATTAC---------
---TCATATAGCTCTTCTGAATTAGCTAGCTAAGATAAACCTTTTGTAACTCTTTCTAAGTTGCTATGTTATATCATGAT
TTATATTTGTATTTGATGTCATGCATAAGTGTATACTTAATTATCAACGTAATGTGGGAATAGTAAGCTTACTATATGAG
TCCAGGACGTTATTCGAACAGGCAGAGTCCAGGACGTTATTCGAACAGCCAGTGAT--ATGTTTGGTGTTCATGCAGACT
CAGAAGCTGACAGATCATCAGTGAGTTTCAAAGAGCATCGCCGCAATCACTACGATGAATTCCGCAAGGTCAAAGAACTG
ATGCGCACTGGATCCCTGGTTGAAGATGAGGCCCGTGTGAATGAGCGAGCTGCAAACAACGCCGAAGACAAAACTGCAGG
AGAGAAGGCAACAGGTGACAAGAGTGAATCGTCAGCATCACCTCAAGTATGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr4A_1_TraesCS4A01G246900
TTAATTATGGGTACAAAATCATGGGGTTTGGCTCCGAAATGGTGACCGGCCATCTGCCACAGCACACTGAAGCCATCGTA
ATACAGTCATTCCATCTTTTTTTCAGAGGGAATAAACATTTCGTGTAGCCCCGGCCGATTGTTCACCACCGTAAATCGAA
TCCTCAGATTCAGCCTTTCACACCTCACGGCCTTGTAGCGATGGTCTCCGGTGCCACTACACAGTGGCACACTCCCGTCA
TGGCCGCGTTGCGCCAGGCTGAAGCATGCCCATCAGTGAACTAACTCGACTAAGGCCGTCTTTGTTGAACACACCATCAT
GGCTGGTGATGGCATGTTTGGCCTTTGTAGGGCACCCTTGTAGAAAGCAAGGCGGCCAGTACAGCGAAGAGAAATTGTGC
AGCAGTGTGTGCCGGTGCGGTGCCGAGGGAGTACTTGCTTGTTCTTGAGCAGTAATGCTAGGAGGATGGAAGGCAAATTA
AGTAAACAGTTTCGTGCAGCCCTCTTGCTGGTTGTTACAATAGTAGTATAGTAATTCTACTGTTATGTAT---AGGGCCA
CCATTTTGGTGTGACGCACAATTGCCCCCATTTTACAATGTCACATAGCAAATTTTGCTTATTATCGTGTTGAACTATTC
CATAT--CGATTTGTGTACTATTAAG--AAGTATGTTTTTGAAAGATTGTTGGTATACACATTCTGTCAAAATTATCAGA
AAACTGCACATTTGATTGACTACAAAAGCCATAGATTCTTGCTGATAATTGCCGTCTGGTCATTAGCTTGTCCCACCTCC
CATGTGTCAGATGCACTATTAGATGGTCTGAGCATGTCGTGTCCGTTTGTCACAGTGGCACACTCCCACC-------TCC
CAAAATATGGGCATCTTTGTTCGATTTAC-------TCTTGACAGTTTTTTTCTGCAGGGAAACCTAGAATAGGTGGTGT
TATCTGGCTTCGAATTGCTGTCTAAACATTTCTTGATCCTCACTCATCA---------------GAAACTTAAAGCATGA
GGTTAGTAGTCTTAATTCCTCCTTCGAGATCAATAAGAAACTGTTTGAAAGAAATGATGCATACTGACTTATTTTGGTAT
GTACGTTTTTCAGAGTGTTAGTTAGTACTCCATTACTTGGCTTGGGTTGTTTCAAATC----TTATCTCTGGGCTAGCAT
AATGATGGAGCATAAGCATTTCTCT---TTTTTTTAACCAACTTGTGAACAAGGGTTCAGCATATTTGTTTGGTGTCCTG
AGTAATACAATTGATTTTTACATTGCAACATGACATGGTAAATTAAAGTGTGTAGACAGTCTTGAACTTAATCCAGGTTT
TATAC---------------------------------------------------------------------------
---------AAAATAGTATTCTCTGTTTGAGAAACT-GGAAGGACTGATAGAGCTAATATGTCAAAGGGCTTATATTCGA
TATAAGATTCTCTATTTGGCTTTTGCATTTTATGCTACTATGAAGACATAGAAAATAGCATCGATCTGTTGCCTGCTTAA
ACACAATAAAGCCTAGCTATTGATTTCTACATGGACGTGGTATTGGAAAAAATGGGTATGATTTTGTAGTACCATTTGTA
TTTTTATATGGTTTTACATGTACGCG-ATG------TTTTTGGCGCAAATGCTGCGCTATGATCCAGAGCTAATGAAATC
AACTGAACTGGCTGCATAAGTGTGAGCTAGACCTCAACTTGCTTGATTTTGCTTCCATTATTTTGACTTTTTTCTCTTCA
GTTCCCATCGCGTGAAGTGGAATGAGGACAATCTGTATGAGATTGAATCAAACAAGCCAGTGAGGCAGAAGATAACCGAG
CCCAAGACACCGTATCACCCTATGATGGATGAAGAAGATGGTATATGTCTTGTTACTTGTATCTCATCATATCTGACCAC
TATTTGTGCTCATAATGTGCAAGCGCTGGATAATTGCTTTCATTGCTTG--CTCTCTAGGGTCACTATCACCAACACGCC
CTTTCGACAAGTGTCTAGATGAGACTGTTAGTGCTGAAGCTATATTGACTGCTTTAAATGGTGTGGCCTCTTCAAGTAAA
AATGATTCAAAGGATGATGAGTGGGCATCCTCAGATGATGATGCAGATGCCATGGAACAGGATGATGGTTGGTAGCTTCT
TTCTCAGTTACCATTTTATGTTTCTAGAGTTGCTAGAGTAAATTAGTAATTACTGATGTTCAATATATTTGACTAGCTGA
GTTATGCGACTTGATTTTATGGTATCAGCTTTCTGTAATGAAGTCCATAAGTGATCCAACTATATGATTAC---------
---TCATATAGCTCTTCTGAATTAGCTAGCTAAGATAAACCTTTTGTAACTCTTTCTAAGTTGCTATGTTATATCATGAT
TTATATTTGTATTTGATGTCATGCATAAGTGTATACTTAATTATCAACGTAATGTGGGAATAGTAAGCTTACTATATGAG
TCCAGGACGTTATTCGAACAGGCAGAGTCCAGGACGTTATTCGAACAGCCAGTGAT--ATGTTTGGTGTTCATGCAGACT
CAGAAGCTGACAGATCATCAGTGAGTTTCAAAGAGCATCGCCGCAATCACTACGATGAATTCCGCAAGGTCAAAGAACTG
ATGCGCACTGGATCCCTGGTTGAAGATGAGGCCCGTGTGAATGAGCGAGCTGCAAACAACGCCGAAGACAAAACTGCAGG
AGAGAAGGCAACAGGTGACAAGAGTGAATCGTCAGCATCACCTCAAGTATGAGCCATAAAGTGAATTCTGTGGTCGCTAA
GCCTAGGGAAAGTTCAACTAAGCGGGAGCATGCAGTTTGCGCCTGCTCTGTGTGTATTGTTGGATCCTTGTTTTCATGCC
AGATCGGATGATTTTCTGTACGCAAAGAACCTGTTCCTCTTTCT-TATTTTGAGATGCCGCGGTGCCTAAAATGGTGGAG
AATTCTAGTTGAACTAGCTACTTCACGTTCAGTCAGGAGGCTAGAATTTGCCTGGGCCGCTTTTTATAATACTGGAACTG
AGTTATATGGACAACCCTTGAGCAATTTTTCTTCTTGAGATCATGCTTTACTGCTTG--------------TGATTGCGG
ATCCATGATGAAC--ATAAGAGTTATTGCACAATTAAG------------------------------------------
---------------------------------------------------------GTATTTACTTTCATTGTTCAGTT
CAGTAGTTCATTGGTTTGCCTGGCCATTGGAAACAGCTTATGAGAATATGAGATTGTAAAGCAGGAAACTGTGGCCTGCT
TGAACAGCTCGGTTGCTCGCTAGGATTTAATGCCAAGAGAGTTTGAACGCACACCTTGTGGTGTAACATTTGGCAAATTA
AAATAAAGTGATTAGTAGAAAGCTCGGAGCGAAGTTATACGATGTCGACAATTATGCACTTTTTTGGTTAACCAAAGTTC
ATCTTTTAACAATAAATATAATTATGCAATTTTTCAGTTAACCAAAATTCATCCTTACAAAGATAAAATAATTGGTGGAT
GGAGGTCGGTGATTACCGCAAATGATTAGTGGATTGGGATGTAACGCCCCGATCTGGATCGAAGGCGACTAGAGTAGGCT
TCGGGAGGGGATCGGAGTAGGAGGGTGAGGGAGAAGGGGGTGAGCGAGGGGAAAGTAGGTGAGGGAATTCAGAATATCTT
TTCATCAGCATACTTGATACAACCCCTCTCCAGGGCGTAAGTACTTGCGCGACCCAACCAGCCCTTGGCCTCTCATACAC
TTACAAGTGGAACCCACGCACGCCTACACTTGGCTAGGCCAACTGGCA
>chr4D_1
TTAATTATGGGTACAAAATCATGGGGTTTGGCTCTGAAATGGTGACCGGCCATCTGCCACAGCACACTGAAGCGATCGTA
ATACAGTCATTCCATCTTTTTTTCAGAGGGAATAAACATTTCGTGTAGCCCCGGTTGATTGTTCACCACCGTAAGTCGAA
TCCTCAGATTCAGCCTTTCACACCCCACGGCCTTGTGGCGATGGTCTCCGGTGCCACTACACAGTGGCACACTCCCTTCA
TGGACGCGTTGTGCCAGGTTGAAGCATGCCCATCAGTGAACTAACTCTACTAAGACCGTCTTTGTTGAACACACCATCAT
GGCTGGTGATGGCATGTTTGGCCTTTGTGGGGCACCCTTGTAGAAAGCAAGGCAGCCAGTCCAGCGAAGAGAAATTGTGC
AGCAGTGTGTGCCGGTGCAGTGCCGAGGGAGTACGTGCTTGTTCTTGAGCAGTAATGCTAGGAGGATGGAAGGCAAATTA
AGTAGACAGT-TCGTGCAGCCCACTTGCTGGTTGTTACAATAGTAGTATAGCAATTCGACTGTTATGTATCAAAGGGCCA
CCATTTTGGTGTGATGCACAATTGCCCCCATTTTACAATGTCACGTAGCAAATTTTGCTTATTATCGTGTTCAACTATTC
CATATATCAATTTGTGTACTATTAAG--AAGTAT-TTTTTGAAAGATTGTTGGTATGCACATTCTGTCAAAATTGTCAGA
GAACTGCACATTTGATTGACTACAAAAGCCATAGATTGTTGCTGATAATTGCCGTCTGGTCATTAGCTTGTCCCACCCCC
CATGTGTCAGGTGAACTATTAGATGGTCTGTGCATGTCGGATTCGGTAGTCACAGTGGCACACGCCCACCTTCCGCTTCC
CAAAATATGTGCATCTTTGTTCGATTTACC-------CTTGACAGTTTTTTTCTGCAGGAAAACCTAGAATAGGTGGTGT
TATCTGGCTTCGAATTGCTGTCTAGACATTTCTTGATCTTCACTCATCA---------------GAAACTTAAAGCATGA
GGTTAGTAGTCTTAATTCCTCCTTTGAGATCAATAAGAAACTGTTTGAAAGATATGATGCATACTGACTTATTTTG-TAT
GCACGTTTTTCGGAGTCTTAGTTAGTACTCCATTACTTGGCTTGGGTTGTTTCAAATC----TTATCTCTGGGCTAGCAT
AATGATGGAGCATAAGCATTTCTCT---TTTTTTTA-CCAACTTGTGAACAAGGGTTCAGCATATTTGTTTGGTGTCCTG
AGGAATACAATTGATTTTTACATTGCAACATGACATGGTAAATGCAAGTGTGTAGAAAGTCTTGAACTTAATCCAGGTTT
TATGC---------------------------------------------------------------------------
---------AAAATAGTATTCTCTGTTTGAGAAACT-GGAAGGACTGATAGAGCTAATATGTCAAAGGGCTTATATTCGA
GATAAGATTCTCTATTTGGCTTTTGCATTTTATGGTACTATGAAGGCATAGAAAATAGCATTGA--TGTTGCCTGCTTAA
ACACAATAAGGCCTAGCTATTGATTTCTACATGGATGTGGTATTGGAAAAAATGGGTATGATTTTGTAGTACCATTTGTA
TTTTTATATGGTTTTACATGTACACG-AAACCATGTTTTTTGGCGCAAATGCTGCGCTATGATCCAGAGCTAATGAAAAC
AACTGAACTGGTTGCATAAGTGTGAGCTAGACCTCAACTTGCTTGATTTTGCTTCCATTATTTTGACCTTTTTCTCTTCA
GCTCCCATCGCGTGAAGTGGAATGAGGACAATCTGTATGAGATTGAATCAAACAAGCCAGTGAGGCAGAAGATAACCGAG
CCCAAGACACCGTATCACCCTATGATGGATGAAGA---TGGTATATGCCTTGTTACTTGTATTTCATCATATCTGACCAC
TATTTGTGCTCATAATGTGCAA-CGCTGAATAATTGCTTTCATTGCTTG--CTCTCTAGGGTCACTATCACCAACACGCC
CTTTCGACAAGTGTCTAGATGAGACTGTTAGTGCTGAAGCTATATTGACTGCTTTAAATGGTGTGGCCTCTTCAAGTAAA
AATGATTCAAAGGATGATGAGTGGGCATCCTCAGATGATGATGCAGATGCCATGGAACAGGATGGTGGTTGGTAGCTTCT
TTCTCAGTTACCATTTTATGTTTCTAGAGTTGCTAGAGTAAATCAGTAATTACTGATGTTCAATATATTTGACTAGCTGA
GTTATGCGACTTGATTT-ATGGTATCAGCTTTCTGTAATGAGGTCCATAAGTGATCCAACTATATGACTAC---------
---TCATATAGCTCTTCTAAATTAGCTAGCTAAGATAAACCTTTTGTAACTCCTTCTAAGCTGGTATCTTATATCATGAT
TTATATTTGTATTTGATGTCATGCACAAGTGTATACTTAATCATCAACGTAATGGGC-AATAATAAGCTTACCATCTGAG
TCCAGGACGTTATTGGAACAGG---------------------------CAGTGAT--ATGTTTGGTGTTCATGCAGACT
CAGAAGCTGACAGATCATCAGTGAGTTTCAAAGAGCATCGCCGCAATCACTACGATGAATTCCGCAAGGTCAAGGAACTG
ATGCGCACTGGATCCCTGGTTGAAGACGAGGCCCGTGCGAACGAGCGAGCTGCAAACGACGTCGAAGACAAACCCGCAGG
AGAGAAGGCAACAGGCGACAAGAGTGAATCGTCAGCATCACCTCAAGTATGAGCCGCAAAGTGATTTCTGTGGTCGCTAA
GCCTAGGG-AAGTTCAACTAAGCGGGAGCATGCAGTTTGCGCCTGCTCTATGTGTATTGCTGGATCCTTGTTTTCATACC
AGATCGGATGATTTTCTGTACGCAAAGAACCTGTTCCTCTTTTCATATTTTGAGATCTTGTGGTGCCTAAAGTGGTGGAG
AATTC---------TAGTTACTTCACGTTCAGTCAGGGGGCTAGAATTTGCCTGGGCTGCTTTTTATAATTCTGGAACTG
AGTTATATGGACAACCCT---------TTTCTTCGTGAGATCATGCTTTACTGCTATTATAG---TGCTGATGATTGTGG
ATCTGTGATGGAC--ATAC-AATTATTGCACATTTAAGGTATTCACTA--------------------------------
----------------------------------------------------------------CTTTCATTGTTCAGTT
CAGTAGTTCATTGGTTTGCCTGGCCGCTGGAAACGGCTTATGAGAATATGAGATTGTAAAGCAGGAAACTGTGGCCTGCT
TGAACAGCTTGGTT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr4B_1
TTAATTATGGGTACAAAATCATGGGGTTTGGCTCCGAAATGGTGACCGGCCATCTGCCACAGCACACTGAAGCGATCGTA
ATACAGTCATTCCATCTTTTTT-CAGAGGGAATAAACATTTCGTGTAGCCCCGGCCGATTGTTCACCA-CGTAAATCGAA
TCCTCAGATTCAGCCTTTCACACCTCACGGCCTTGTAGCGATGGTCTCCGGTGCCACTACACAGTGGCACACTCCCTTCA
TGGCCGCGTTGCGCCAGGTTGAAGCATGCCCATCAGTGAACTACCTCAACTAAGACCATCTTTGTCGAACACACCATCAT
GGCTGGTGATGGCATGTTTGGCCTTTGTGGGGCACCCTTGTAGAAAGCAAGGCGGCCAGTCCAGGGAAGAGAAATTGTGC
AGCAGTGTGTGCGGTTGCGGTGCCGAGGGAGTACTTGCTTGTTCTTGAGCAGTAATGCTAGGAGGATGGAAGGCAAATTA
AGTAGACAGT-TCGTGCAGCCCTCTTGCTGGTTGTTACAATAGTAGTATAGTTATTCTACTGTTCTGTATCAAACGGTCA
CCATTTTGGTGTGATGCGCAATTACCCCCATTTTACAATGTCACATAGCAAATTTTGCTTATTATCATGTTGAACTATTC
CGTAT--CAATTTGTGTACTATTAATCTAAGTATGTTTTTGAAAGATTGTTGGTATACACATTCTGTCAAAATTATCAGA
AAACTGCACATTTGATTGACTACAAAAGCCATAGATTCTTGCTGACAACTGCCGTCTGGTCATTAGCTTGTCCCACCTCC
CATGTGTCAGATGCACTATTAGATGGTCTGTGTGTGTCAGATTCAGTAGTCACAGTGGCACACTCCCACCTTCCATCTCC
CAAAATATGTGCATCTTTGTCCGATTTAC-------TCTTGACAGTTTTTTTCTGCAGGAAAACCTAGAATAGGTGGTGT
TATCTGGCTTCGAATTGCTGTCTAAACGTTTCTTGATCTTCACTCATCA---------------GAAACTTAAAGCATGA
GGTTAGTAGTCTTAATTCCTCCTTTGATATCAATAAGAAACTGTTCGAAAGATATGATGCATACTGACTTATTTTGGTAT
GCACGTTTTTCAGTC------TTAGTACTCCATTACTTGGCTTGGGTTGTTTCAAATC----TTATCTCTGGGCTAGCAT
AATGATGGAGCATAAGCATCTCTCTCTTTTTTTTGA-CCAACTTGTGAACAAGGGTTCAGCATATTTGTTTGGTGTCCTG
AGGAATACAATTGATTTTTACGTTGCAACATGACATGGTAAATTAAAATGTGTAGACAGTCTTTAACTTAATCCAGGTTT
TATAC---------------------------------------------------------------------------
---------AAAATAGTATTCTCTGTTTGAGAAACTGGGAAGGACTGATAGAGCTAATATGTCAAAGGTCTTATATTCGA
CATAAGATTCTTTATTTGGCTTTTGCATTTTATGGTACTATGAAGACATAGAAAATAGCATTGCTCTGTTGCCTGCTTAA
ACACAATAAGGCCTAGCTATTGATTTCTACATGAATTTGGTATAGGAAAAAATGGGTATGATTTTGTAGTACCATTTATA
TTTGTATATGGTTTTACATGTACATG-AAACCATGTTTTTTGGCGCAAATGCTGCACTATGATCCAGAGCTAATGAAAAC
AACTGAACTGGCTGCATAAGTGTGAGCTAGACCTCAACCTGCTTGATTTTGCTTCCATTATTTTGACCTTTTTCTCTTCA
GCTCCCATCGCGTGAAGTGGAATGAGGACAATCTGTATGAGATTGAATCAAACAAGCCAGTGAGGCAGAAGATAACAGAG
CCCAAGACACCGTATCACCCTATGATGGATGAAGA---TGGTATATGTCTTGTTACTTGTATCTCATCATATCTGACCAC
TATTTGTGCTCATAATGTGCAAGCGCTGAATAATTGCTTTCATTGCTTG--CTCTCTAGGGTCACTATCACCAACACGCC
CTTTCGACAAGTGTCTAGATGAGACTGTTAGTGCTGAAGCTATATTGACTGCTTTAAATGGTGTGGCCTCTTCAAGTAAA
AATGATTCAAAGGATGATGAGTGGGCATCCTCAGATGATGATGCAGATGCCATGGAACAGGATGGTGGTTGGTAGCTTCT
TTCTCAGTTACCATTTTATGTTTCTAGAGTTACTAGAGTAAATCAGTAATTACTGATGTTCAATATATTTGACTAGCTGA
GTTATGCGACTTGATTTTATGGTATCAGCTTTCTGTAATGAAGTCCACAAGTGATCCAACTATATGACTAC---------
---TCATATAGCTCCTCTGAATTAGCTAGCTAAGATAAACTTTTTGTAACTCTTTCTAAGTTGGTATCCTATATCATGAT
TTATATTTGTATTTGATGTCTTGCACAAGTGTATACTTCATTATCAACGTAATGGGC-AATAATAAGCTTACCATCTGAG
TCCAGGACTTTATTGGAATAGG---------------------------CAGTGAT--ATGTTTGGTGTTCATGCAGACT
CAGAAGCTGACAGATCATCAGTGAGTTTCAAAGAGCATCGCCGCAATCACTACGATGAATTCCGCAAGGTCAAGGAACTG
ATGCGCACTGGATCCCTGGTTGAAGACGAGGCCCGTGCGAATGAGCGAGCTGCAAACAACGTCGAGGACAAAACCGCAGG
AGAGAAGGCAACAGGTGACAAGAGTGAATCGTCAGCATCACTTCAAGTATGAGCCGCAAAGTGAATTCTGTGGTTGCTAA
GCCTAGGG-AAGTTCAACTAAGCGGGAGCATGCAGTTTGCGCCTGCTCTGTGTGTATTGCTGGATCCTTGTTTTCATACC
AGATCGGATGATTTTCTGTACGCAAAGAACCTGTTCCTCTTTCT-TATTTTGAGATGTTGCGGTGCCTAAAATGGTGGAG
AATTCTAGTTGAACTAGCTACTTCACTTTAAGTCAGGAGGCTAGAATTTGCCTGCACCGCTTTTTATAATACTGGAACTG
AGTTATATGGACAACCCTTGAGCAATTTTTCTTTGTGAAATCATGCTTTACTGCTACTATTAGATTGCTGATTATTGTGG
ATCTGTGATGATCATATAC-AATTATTACACAAGTAAGGTACTCCCTCCATTCACTTTTGTAAGATGTTTTAGACATTTG
AGACAACACCTAAAACACTTCAATTTTAGCTCCGTCTTACAAGAATGAACAGAGGGCGTATTTGCTTTCATTGTTCACTT
CAGTAGTTCATTGGTTTGCCTGGCCACTGGAAACAGCTTATGAGAATATGAGACTGTAAAGCAGGAAACTGTGGCCTGCT
TGAACAGCTCGGTTGCTCGCTAGGATTTAATGCCAAAAGATTTTCAACGCACACCTTGTGCTGTAACATTTGGCAAATTA
AAAAGAAGTGTTTAGTAGAAAGCTCGGGGCGAAGTTAGAAGATGTCGACAATTATGCAATTTTTTGGTTAACCAATG-TC
ATCTTTTAAAAACAAATCTAATTATGCAATTTTTGAGTTAACCAAAATTCATCCTTAAAATGAAAA-----TTGGTGGAT
GGAGGCCCGTGATTAGCGTCAATGATTGGTGGATTGAGAT----------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr1B_866
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
CATAATATGTGCATATTTGTTCGATTTACTCTTGAGTCTTGACAGTTTTTTTCTGCAGGAAAACATAGAATAGGTG-TGT
TATCTGGCTTCGATTTGCTGTCTAAACATTTCTTGATCTTCACTCATCATCACTGGGAGGTTAAGAAACTTAAAGCATGA
GGTTAGTAGTCTTAATTCATCCTTTGA-ATCAATAAGAAGCTG-TTGAAAGATATCATGCATACTGACTTATTTAGGTAT
GCATGTTTTTCAGAGTCTTAGTTATTACTCCATTACTTGACTTGGGTTATTTCAAGTCTTGATTATCTCTGGGCTAGCAT
AATGATGGAGCATAAGCATTT----------TTTTA-CCAACTTGTGAACAAGTGCCCAGCATATTTGTTTGGTGTCCTG
AGGAATACAATTGAACTTTACGTTGCAACATGACATGGTAAATTGAAGTGCGTAGAGAGTCTTGAACTTAATCCATGTTT
TATACTCCCTCCGTTCCAAAATAGATGACCCAACTTTGTACTAACTTTAGTATAAAGTTGGGTCATCTATTTTGGAACGG
AGGGAGTAAAAAATAGATTTCCCTGGTTGAGAAACT-GGAGGTACTGATAGAGCTAATATGTCAAAGGGCTTATATTGAA
TACAGAATTTTCTATTTGGCTTTTGCATTTTACGGTACTATGAAGTCTTAGGAAATAGCATTGTTCTGTTGCCTGCTTAA
ACACCATAAGGCCTAGCTATCGATTTCTACAAGGATGTGGTATTGGCAAAAATGGGTATGATTTTGTAGTACCATTTCCA
TTTTTATACGGTATTGTACATGAAACCATG------TTTTTTGCGCAAATGTTTTGCTATGATCCAGAGCTAATG-AAAC
AACTGAACTGGCTGCATAAGTGTGAGCTAGACCTCAACTTGCTTGATTTTCCTTCCATTATTTTGATTTTTTT-TCTCCA
GCTCTCATCGTGTGAAGTGGAATGAGGACAATCTGTATGAGATTGAATCAAACAAGCCAGTGCGGCAGAAGATAGCCGAG
CCCAAGACACCGTATCACCCTATGATGGATGATGA---TGGTACATGTTTTGTTACCTGTATCTCATCATATCTGACCAC
TATTTGTGCTCATAATGTGCGGGT----GCTGATTTTTTTCACTGATTGCTCTCTCTAGGGTCACTATCACCAACACGCC
CTTTCGACAAGTGTCTAGATGCGACTGTTAGTGCAGAAGATATATTAACTGCTTTAAATGGTGTGGCCTCTTCAAGTAAA
AATGATTCAAAGGATGATGAGTGGGCATCCTCAGATGATGACGCAGATGCCATAGAACATGATGGTGGTTGGTAGCTTCT
TTCTCAGTAACCATTTTATGTTTCTAGAGTTACTATAGTAAATAA-TAATTTCGGATGATGAATTTATTTGACTAGCTGA
GTTATGCAACTCCATTTTATGGTATCAACTTTCTGTAATGAGGTCCATAGTTGATCCAACTAATGACTCTTTCTGTAATG
AGATCATATAGCTTTTCTGTTTTC-CTAGCTAAGTTAAACCTTTTGTGACTCTTTCTAAGTCTGCATCTTATATCATGAT
TTATATTTGTATTTGATGTCATGCGCAAGTGTATACTTCATTGTCAACGTAATGGGC-AATAATAAGCTCACCATCCGAG
TCCAGGACGTTATTTGAACATG---------------------------CAGTGATAAATGTTGGGTGTTGATGCAGACT
CAGAAGCTGACAAATCATCAGTGAGTTTCAAGGAGCACCACCGCAATCACTACCATGAATTCCGCAAGGTCAAGGAACTG
ACGCGCACTGGATCCCTGGTTGAAGATGGGGGCCGTGCGAATGAGCGAACTGCAAACAACGTCGAAGACAAAACCGCACG
AGAGAAGGCAACAGGCGACAAGAGTGAATCGTCAACATCACCTCAAGTATGAGCCGCAAAGTGAATTCTGTGGTCGCTAA
GCCTAGGG-AAGTTCAATTAAGCAGGAGCATGCAGTTTGCGC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>SNPs
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
------------------S----------------------------S------S-------------------------
----------------------------S-------------------------------S-------------------
--------------------------------------------------------------------------------
----S-----S---------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S--------SS-S--S-S--------------------------------
---------S-------------------------------------------------S--------------------
--------------------------------------S-----------------------------------------
------------------------S---------------------------S---------------------------
-S--------------S---------------------------------------------------------------
------------------------------------S-------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S--------------------------S------------------
---------S-------------------------S--------------------------------------------
-----------------------S------------------------------------------------------S-
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
-----------------------------------SSS------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S---S------------
-------------------------S----------------------------S-SS----S---------S--S----
--------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------
-------------------------------------------------------------------------S------
-------------------------------------S-----------------------S------------S-----
-------------------------------------------------------SS-----------------------
--------S--------------------------------------------------S-----------------S--
---------------------------------------------------------SS---------------------
--------------------------------------------------------------------------------
----------------------------------S--------------------SS--------------------S--
---SS-------------SS-S----------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------S-----------------------------------------------------
------------------------------------S---S---S---------------S-------------------
---SS-----S----------------S---------S-S------------------S----------------S-S--
---------S--S----S----------------S----------------------S--S--S--SSSSS---------
-----S-S-------S--SS-------S--------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_843
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------TGGTCTGAGCATGTCGTGTC-------------------------------------
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------------------------------------------------
>reverse_2795
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TGCAGG
AGAGAAGGCAACAG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_2595
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------GAACAGGCAGAGTCCAGGAC---------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------
>reverse_3774
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GGAGTAGGAGGGTGAGGGAG-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
