>input_sequence_45072
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-------ATGAGTCACTCCCACCAGATCGTCGAACTGGAGCGCGAGCGCGAGCGCGACGACCGTCTCAGCAGTCTCAGCG
ATGTCGTGCTTGGCCATATCCTCTCCTTCCTCGACGCCGACGAGATCGGCCGTGCCGCGGCGCTCTCAAGGCGGTGGCGC
GACGTCCTGGCCATCGTCCACACCGTCTCCCTGGACATGGATGAGCAGCCGAAACGGCCCATCATCTACGACGTGGTCGA
CGATGACTTGATCTATTCCACCGAGTACATCAATCACCCGCCGGCGCCGCTGTCCTCAATCGTCA---------CCGGCG
CCCTCTTTGGCCGCAGCCGCCGCCCGGCCCCCGCGCCCGGCCCGGTGCCCCTGCGTGCGCTCCGCGTTTGCCTGGGAGTG
AGATTGGGATACAATCCCGACCAAAAGACCACGGTGGACCAGTGGGTTACTTACGCCCTGAAGCATGCCGGCCC------
CGACCTCGAGCTCGACCTCCGCCTCGGCCGAGACC---CCATCTGCAAGCACCCCGACCGGGCCGCCCACGCTAGGCCAT
ACGAGGTTAAAGCCGTTGGCTGGAAGCCTCCGGAGACAAACGCCGACGACCATTCACCCCTTGGGACAGACGACGAC---
---------------GATGGTGACGATGTTGGCTCCAGTTCTGAAGAAAATTTTCGTGGATACG----------------
--------------------------GAGAGTACACCGTCCCATGGGGGGGTTTCTCCTGCCCCGCGCTGCGATCGCTCC
GCCTTGGCGCTTGCAGGATCTCCCCGCCGGCGGCCCTCAGCATGCCATGGCTCGAGGCGCTCCGCCTCACCCAGGTCCCC
GACGAGGAGGAGCACGTGCAAAGGCTCATCTTCGCCTGCCCCCACCTCGTGGACCTGACTCTCGAGGCTTGCGGAACGGT
GACCACGCTCTCGCTCCTCGGCAACACGCGCCTCGGCAGCCTCGCCCTCCGGTGCTGCCATAAATTAGCCACCGTTGTCA
TCAACAAGCCAGAGCTCCGCTCCTTTGAGTACCGCGGTGCCGTCCCTGGCCACTCCTTCCTCACCATGGTCGGCGGCTCG
CCATCTATCATGTCGTTCAAGGTCGACATCCGTGCGATCTGTGTTGGGGAGGCCACCTCAGAAGAGGAGCTCAGCAAGCT
CGATTCCTTCGTACAGCAGTTCGTGTCGACCACGAAACACCTCCACTTATCATGTGCCTTCATGGGCTCATCCTTCGCGC
GGCTCCCGGCATTCACGAGCCTCCGCCACCTTCAACTGATCGGACACGTGCCGCGCGACAGCGACGACCCCGCCGCAGCA
GCTGCCGCGACAAGCAAAATCCTTTGGAAAACCCCGAACCTGGAAACATTGTCCTTGTTATTCGAAGTAAAGCGTCGCAA
TCCCAATAAGTACGACCCCAAGGAGTACGACCGCGGCGATCGCAGCGAGGGGCAGCTCCTCGATGCTCACCTCCTCAACT
GCAACAAGTACGACAGCCTCGACGTTCCGGCTTCGAGCGTGACCGTGCCGGCCTGCCTCAGTAGTCGGGTGAGGAAGATC
AACCTGTTGCATTACCAAGGCGGAAGAGCGCAGAGGATGCTGGTCAGGTTCTTGGTCCGCAACACTGAAGTTCTTGAGAA
GCTTTACTGTGGATTCGCCGAGGGGCCGTTGTGGATTCAGATGGAACTTAAGCGCGAGATCGAACGATGGGCGGTGAACG
GGAAAACTAGCACGGAGTTCCGTTGA------------------------------------------------------
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----------------------------------------------------------------------------
>chr3B_1_TraesCS3B01G495100
CGTTTGTTGGCCC---GATGGTGATGACGATGGACTCAAGGTGGATGGTGGCGAGCGCCGGCGCGGCGTGGATGAGGCTC
TGGAGGTCATCGAGGCGCACGGTGCAATGCCGCAGCCGCATCGATGAAAGCCGGGTGAACACGACTGTGGTGGCCAGTGG
AAGGATGCTGTTGCAGTTGGTGAGTTCGAGCACGCGGAGGGTCTCCGACGGCAGGAAGCGGAGGCTGAGCATGTACTCGC
CTACCACTTTCCGGGCGATCTCCTTCTCCGGCTCATAGTAGGTGTCGTTGC---------AGCCTTCAACGGCGAGCCGG
AGGACTTGGATGTGTTGCGCCGCCGGGTGGGAGAGAAGCGTGGCGATCACGCTTTGGTCCTGGTCCGGCGACGAGCACAA
CCCGTCGCTGTTGTATTGCAGGAACCTGCGGTCGACGCCAAACTCGAACTTCACGCGCAGGGTAAGCGTCGTGATGTGGT
CGGCGGCGGCGAGCGCCGCCTGGGCCGCGGAGACGAAGGCGTCGCGCCGGAAGAAGAACGTGGCCTCCAGGCTCTTGCGC
TCCTCTCCCCAGCTTTGGTAGAGTAGTTCTATGCG---CTCGACGTGCGTCTCGAGGTTTACGGCCCCCGAGGAGCGCAA
GAGCGGCGAGCGCCAGCGCCGGGAGAGCGCTCTCGTGGAGGCGGCCTCCTTGGCCGGGGCGAAGTGGAGGATGCGGCGGA
GAAGCTGGTCGGGGAGCGCGGACAGGCGGTCGTCGACGGCCATCGTCCACGTCTGCGGCGCGATGCGATCACGTTCTCGA
TGGGATGGGATG-----GGGAATTAGGGTTTAGGGATCGGATCGGTACGTAGGGGAGATATACCTTTTT-----------
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-----------------------------------------------------------TTCTTGCCAAAGAAAAAAAA-
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------------------------------------------------------------ATCCGTTTACGTATTTGGGC
AGGCAACGACGTAAACGTCAGTTATGAACCGATCTCTAGTCCTCTACACGGCATCTCCGAGATT----------------
----------------------------------------CTGAGATCGCCGCCGCCAGCCGCCGTGTCGAACGGGAGCG
CGACGAGATGAGTCACTCCCACCAGATCGTCGAACTGGAGCGCGAGCGCGAGCGCGACGACCGTCTCAGCAGTCTCAGCG
ATGTCGTGCTTGGCCATATCCTCTCCTTCCTCGACGCCGACGAGATCGGCCGTGCCGCGGCGCTCTCAAGGCGGTGGCGC
GACGTCCTGGCCATCGTCCACACCGTCTCCCTGGACATGGATGAGCAGCCGAAACGGCCCATCATCTACGACGTGGTCGA
CGATGACTTGATCTATTCCACCGAGTACATCAATCACCCGCCGGCGCCGCTGTCCTCAATCGTCA---------CCGGCG
CCCTCTTTGGCCGCAGCCGCCGCCCGGCCCCCGCGCCCGGCCCGGTGCCCCTGCGTGCGCTCCGCGTTTGCCTGGGAGTG
AGATTGGGATACAATCCCGACCAAAAGACCACGGTGGACCAGTGGGTTACTTACGCCCTGAAGCATGCCGGCCC------
CGACCTCGAGCTCGACCTCCGCCTCGGCCGAGACC---CCATCTGCAAGCACCCCGACCGGGCCGCCCACGCTAGGCCAT
ACGAGGTTAAAGCCGTTGGCTGGAAGCCTCCGGAGACAAACGCCGACGACCATTCACCCCTTGGGACAGACGACGAC---
---------------GATGGTGACGATGTTGGCTCCAGTTCTGAAGAAAATTTTCGTGGATACG----------------
--------------------------GAGAGTACACCGTCCCATGGGGGGGTTTCTCCTGCCCCGCGCTGCGATCGCTCC
GCCTTGGCGCTTGCAGGATCTCCCCGCCGGCGGCCCTCAGCATGCCATGGCTCGAGGCGCTCCGCCTCACCCAGGTCCCC
GACGAGGAGGAGCACGTGCAAAGGCTCATCTTCGCCTGCCCCCACCTCGTGGACCTGACTCTCGAGGCTTGCGGAACGGT
GACCACGCTCTCGCTCCTCGGCAACACGCGCCTCGGCAGCCTCGCCCTCCGGTGCTGCCATAAATTAGCCACCGTTGTCA
TCAACAAGCCAGAGCTCCGCTCCTTTGAGTACCGCGGTGCCGTCCCTGGCCACTCCTTCCTCACCATGGTCGGCGGCTCG
CCATCTATCATGTCGTTCAAGGTCGACATCCGTGCGATCTGTGTTGGGGAGGCCACCTCAGAAGAGGAGCTCAGCAAGCT
CGATTCCTTCGTACAGCAGTTCGTGTCGACCACGAAACACCTCCACTTATCATGTGCCTTCATGGGCTCATCCTTCGCGC
GGCTCCCGGCATTCACGAGCCTCCGCCACCTTCAACTGATCGGACACGTGCCGCGCGACAGCGACGACCCCGCCGCAGCA
GCTGCCGCGACAAGCAAAATCCTTTGGAAAACCCCGAACCTGGAAACATTGTCCTTGTTATTCGAAGTAAAGCGTCGCAA
TCCCAATAAGTACGACCCCAAGGAGTACGACCGCGGCGATCGCAGCGAGGGGCAGCTCCTCGATGCTCACCTCCTCAACT
GCAACAAGTACGACAGCCTCGACGTTCCGGCTTCGAGCGTGACCGTGCCGGCCTGCCTCAGTAGTCGGGTGAGGAAGATC
AACCTGTTGCATTACCAAGGCGGAAGAGCGCAGAGGATGCTGGTCAGGTTCTTGGTCCGCAACACTGAAGTTCTTGAGAA
GCTTTACTGTGGATTCGCCGAGGGGCCGTTGTGGATTCAGATGGAACTTAAGCGCGAGATCGAACGATGGGCGGTGAACG
GGAAAACTAGCACGGAGTTCCGTTGATCGGGTGATGGATGCTTCTCTGCCTTTGCAATTGCGGTACAACTTCTGATGGAT
TCGTGATAATTTAGTAAATGTTGAACATAATTCTCTAAACATTCGTCTCAATCGATTAAGACATAACCAAGTCTCGGTCG
GCTAATACTTAACCAAGTCTTGGTCCATGCTATATCCGTGAGATCTTACTTTGAGATTCGTGCAATTTCTTTCTTTCTTT
TTCTCTCTTGCATGCTATGTCACTTGAGTGCGACTTGATTAAATCTCAGTCGACTGAGACCTAGTCAAACCCGTCATTTA
TTGATTGTCTAGAATGTCTACAGGAATTGCAGT--TATATATAGTACGTATATATCATGCGGATTGCCCCTGCCCCTGCC
CCTAGCCCCATCTACATCTAAAGATAAAGCAATCC-------ACATGTTAGGGTTCGATATACCTGTGAAAACAACTGAA
GATCCAAGATAATTGCCGATGGATATGATCTTGGGTTATCCTAAAACATCTTCTCTCCACGTTCAACTGCAGCCCCGCCC
ATGAGATCAAATTCACAGGCGCAAAAACCACATCAAAGGGAGCACTGGGATGCTTAAACTCAAAGGTGCCACGATTTGAC
AGTTCCAAATGCCTCAACAAATAGCTAGCAGCAAGGCCAGTAGTATAAAACTT-TCACCATCAGGTAAAAAGATGTAGTA
TCAAACTTTTCACGTTCATGTCCTTCTGCTCTCATTGCTGGCTGTTTGTTGTTGGATATGCTGTACGAAAGACGAATATA
AGAAAACGTCCTCAGTAGTGAATTGTTGGCTCTCAACTATTTCATGACATTCAGTGGTCGATCATAGGCATTACTTTACT
GCTACATCATCTCTTATAGTGTCTATATCAGGGTTAAAAAATTCAGTGAAATTTCGCATATTTCAATGGGGTTCAAAATA
TTTTTAACCTCAAAATTTTGATGCAGATTCAAACTTATTTCAAAGTAAAGTTAAATTATGTTAAAATTCATAAAAT
>chr3D_1
CGTCTGTTGGCGCAATGACGATGACGGCGACGGACTCAAGGTGGACGGTAGCAAGCGCCGGCGCGGCGTCGACGAGGCTC
TGGAGGACACCTAGGCGCACGGCGCAATGCCGCAGCCGCATGGACGAAAGCCGCGTGAACCCTACTATGGCGGCCGGTGG
AAGGA---TGTCGCAGCTGGTGAGGTTGAGCACGCGGAGGGTTTCCCACGGCAGGGAGCCGAGGCTGAGCGTGTAGTCGC
CTACCGCTTTCCGAGCAATCTCACTCTCGGGGTCATAGTAGGTGTCAGTGCGGATGACCCAGCCTTCGACGGCGAGCCGG
AGATCCTCGACGCGTCGCGCTGCCGGGTGGGAGAGAAGCGTGGCGATCACGTGGTGGTCCTGCGACCGCGACCCGTCCCT
CTTGTCGTTGTCAGAGTGCAGGAGCCAGCGTTTGATGCCGAACTCGAACTCCACACGCAGGGTGAGCCTGGTGACGTGGC
CGTCGGCGTCGAGCGCCGCCTTGGCCGCCGACACGAAGGCGTCGCGCCGCGAGAAGAACGACGCCTCTAGGGTTTTACGC
TGCTCCCCCCAGGTACTGGAGAGCGTGCGGTCGAAGTCCTCGAGGCGCGTCTCAAGGTTTACGGCGCCCGAGGAACGCAA
GAACGGCGAGCGCCAGCGCCGGGAGAGCGCTCTCGTGGACGCGGCCTCCTTGGCTGGGGCGAAGTGGAGGACGCGCCGGA
GAAGCTGATCGGGGAGCGCGGACAGGCGGTCGTCCCCGGCCATCGTCTACGTCCGCGGCGCGATGCGATCACGATCTGAA
TCGGATGGGAAG-----AGGAGATATCATGCCATGGACTCGGCTCGACCGGTGCTGACCTGCATGTGTGTGTCTANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATACCTGCCCCAAT
TGAGGAGCCATTGGATATGGAATCTACTCTGTCTTTTTTTTTCCTTTTCGAAAAGGGAACACTTACCATCATCCGGCGGA
TCGCAGCGGCAGCGTCCGTCACCTACCCTGCGTGACATGCATCCAACTGAGAGTCCGCTACCAGACGACACACACTTTTA
CAACAGGGGTTATGTTTCTGAAACATAAATGCGATGTTGCAATGGTCTACGATGGGTGCACATTTTGCAACAAAACTTCT
CTTATGAGATTTTTTTTCCGCAACATGACCTCATTTGCAAAAAAAGTCCAACAAAACAGTTGTTGCCAAAAAAAATCTGC
AACAAGACCTATATTACAGAAATAATTACCTATATCGCAACAGTGAAGACGCGCTCGGCCGCCTGATGCGGCAAATCTGA
CGGTTGCGACCCGGCTAATCTTTTAAAAAGATCAGCTGACGGACGCATAGCACGCCCCCGTGAAAAAGGCCTAAAGAGCA
ACTCTAATGGCTCCCTTAAAACTTCCTGTATAAACTTTATGTGAATTCTCCGAAACTCTTGAGTGCTAGTGCTAGTTTTG
GTCAGTTTCCATAAATTTCTTTCCCTAAATCCGTTCTTAATTTATTTTTAATTAAAGAAACAGATAATGGCTAAGGACCC
GCCGGTCAGTCACAGGTTTGACGGTCATTGTCCAGGGGTGGCGTGGCCGTGCTGCGATGGCCGCCGGCGCTAGGAGGCGT
GGCGGCCAAAGGCAGTGTGCTTGGCAGCGGTGTCGTTCCGTTGTGGGCGGCGGCGGTGCGGCATCGTTCCGACGACGTTC
CGGTAGGGTGCGTGATGAAGTTTCAAGCGGTTTCCACATACAAGAAGATCATCTTCCCGTAAACCTAATGGAAGAAATGG
CATAGTTTACAGGGTCCCCTAAAATTATGAATGGTATACAAGAATTGCTGGAAATATTTTTTCCCTAACTTCGCATAAAT
GACAGTTCTTTCATGGATAGTGGAGCTATTGGAGTTGCTCTAAGGCCATAAATATCTACTAGGTTTTTTGGCAGAACCTT
TTCTATTTGCTCCCCTCCAAAGGCAGAACTATCCATTATTTCGTTCTAAAATAGATTTTCCTATTATCACTTTTTGGCTT
ATTGGCATTTTTGTAACTCGATTATTTTGTGCCTAATTGAAATATCTGGGTTTTTTGATTTTTTTGCCAGGTTTTTAGGT
ATCAAAATGCACTTGATTTAACAAATTCTACATTAGATATCTTTTTTTTCGCAGAAAAACTTCTAATCTATTCATCAACT
GTTAAGGTAGTACAAATCACTAGAAGTAAATATTACATCCAATTCTGTGACCACCTACCGACGACTACAAGGACTGGAGC
TAGCCGAGCACGCGCCGCTATCATCGCCCCTCCCTCACCACAGCCAGGCATACCTTCTTATAGAGGACCGTCGAGAAGTC
GTCGTGCTAAGGCCCTACAGGACCAATGCACCTGGACAGCAACCGCCATCAACCGCCGCAACTGAAGAGAACCGTAGATT
GGAAGGATCCAACCTGTAGACACACGAACACATATGAATGAAGACCGGATCCATAGGGATCCACCAAAGACTAACGCCGA
CTGAATACCGCGAGATCCGCAGGAGACAAACCTCCAATGCCCTACGACGACGCTAGAAGAACAGCGGTGACGGGGGCTGG
TGGGGAGAACCTTATTCCATCTTTAGAGATCCGTCGTCGCCTCACCTTTCTAAGCTGCTGGACACAAACTCTAACGAAAC
TTCAAAATATATCCAAAAAATGGAGCCCTCTTGTCGGCAAAGCTTTGGATCCATGGCGCCTCCTTGGTCCTAAGACCACA
GAAGACGAGGCAGACCAGCGGCAGCGCGGGCAGGAGGCAAAGGAAACCCTAGTTGCTGGCTGTACTTCTTAGGAGTCCTT
ACCAGCGAAGGGGTATGAGACTCACCTCGTCAACCTAAGTTATCTTTTTGTTTGCGTTTAGTTTGAATCTAGTTTATTCC
CCCCAAAAAAAGTTTGAAGCTAGTTTGAAATTTCAAGGTTACAAATATTTGGCATCCACCGAAAATTGCCAAAACTTTTA
GAAATACATCGCAATTTGACCCTAATTCTAAGCAATAATAGTACTAGTTTTTTATTTTGGATCCGTATACGTATTTGAGC
AGGCAACGCCGCAACATGCTAACTACAGTTATAACTTGATCTCCTCTGCGCAAGAAACCTAGCTAGCTTGGTAGCCATCT
TCGAGATCAGAGATCGCGATCCCCCCCACCCAAAAAAAAACTGAGATCGCCGCCTG------------------------
------GATGCGTCACCCGCACCAGATCGCTGGAAGGGAGCGG------------GACGACCGCCTAAGCAGCCTCGGCG
ACGTCGTGCTTGGCCACGTACTCTCCTTCCTCGACGCCAAGGAGATCGCGCGCGCCGCCGCGCTCTCGAGGCGATGGCGC
GACGTCCTCGCCCTCGTCCACACCGTCTCCCTGGGCCTG---GAGCAGCCGAAACGGCCCCTCATCGCCGACGAGGAGTA
CAGCGGG------------AGCGGGTACAGGGCCTACGCACCGGCGCCGCTGCCCTTAAACGCCGATGGCCTCGCCGACG
TCCTCTTTACCCGCATCCTCCGTCAGGACCCCGCCGCCGCCCCGGTGCCCCTGCGCGCACTCCGCGCGCTCGTTTGCA--
----TGGGATACGAGCCCGAGGACGAGACGACGATGGACCAGTGCGTCTCTTACGCCCTGGAGCACGCCGGCCCCGAGTT
CGAGCTCGAGCTCGACCTCCGCTTCGACCCAGACAAAACCATCTGCAAGTACCCCAATCCTGCCGCCGAAGATCATTCAC
TCTGTGCGCTACAGAGA------AAGCCTCCCCAGACTGACGCCGAAGACCATTCACTCCGTGCGCCACATGACGACGGC
GGCGACGAGGACGATGATGGCGACGATGTCGGCTCCAGTTCTGAGGAAAATTTTGGTGGAGATCAAGAATACACCCTCCC
GAGGAGGCGCATCTCCTACGCGGAGCGACAGTACACCGTCCCCTGGGGACTCTTCGCCTGCCCGGCGCTGCGATCGCTCC
GCCTTGGCTGGTGCAGACTCGCCCCTCCGGCGGCCTTCAGCATGCCGTGGCTCCAGGCGCTCCGTCTCACCCACGTCCCT
GATGAGGAGGAGCACGTGCAAAGGCTCGTCTCTGCCTGCACCCACATCATTGATCTGACGCTCGAGGCTTGTGGAACGGT
GACCACGCTCTCGCTCCTTGGCAACACGCGCCTCCGCAGCCTCGCCCTCCGGTGCTGCCGCAAGCTGGCCAATGTCTCCG
TCGACGCGACAGAGCTCCGCTCCTTCGAGTACCGCGGCGCCGTCCCCAGCGACTCCTTCCTCACTATGGTTGGCAGCTCG
CCGTCCATCACGTCGTGCAAGATCGACATATGTGCCATCTGCATTGGGGAGGCCACCTCACAAGAGGACCTCGGCAAGCT
TGGTTCGTTCCTACAGCAGTTCGCATCGACCACGAAACACCTCCACTTATCGTGCGCCCTAATGTGCTCATGCTTCGTGC
GGCTCCCGGCGTTCACGAGCCTTTGTCACCTCCAGCTGATTGGACGTGTGCCGCGCAGCGGTGATGACCATGCCGCCGCA
GCTGTTGCGGTGAGCAAAATCCTCCGGCAAGCCCCAAACCTAGAGACGTTGTCCCTGCTCTTCGAAATAAAGCGTC----
-----------ATGACCCCAACAAGCATGACTACCGTGACCACAACAAGGGGCAGCTCCTCGATGCTCACCTCCTCCACT
ACAACAAGTACGACACTCTAGACATGCC---GGCGGGCGTGGTTGTGCCGACGTGCCTCGGGAGTCGGGTGAGGAAGATC
AACCTGTTGCATTACCAAGGCGGAAGAGCGCAGAGGATGCTGGTCAGGTTCTTGGTCTGCAACGCTAAAGTTCTTGAGAA
GCTATATTGTGGATTCGCCGAGGGGCCGCTGTGGATTCAGACCAAACTGAAGCGTGAGATGGAAAACTGGGCGGTGAACG
AGACAACTAGCAAGGAGTTCCGTTGATCGGTTGATGGATGCCTGCGTGCCTTTGCAATTGCAAAACAACTTGTGATGGAT
TCGTCATACTTTAGTGAATGGTGAAGTATTTTCTAAATAT----------------------------------------
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----------------------------------------------------------------------------
>chr3D_7
------TTGGCCC---AATGGTGATGACGACAGACTCAAGGTGGACGATGGCGAGCGCAGGCGCGGCATCGAACAGGCTC
TGGAGGGCATCGAGGCGCACGGTGCAATGCCGCAGCCGCATCGATGAAAGCCGGGTGAACACGACAGTGGCGGCCGGTGG
AAGGATGCTGCTGCAGTTGGTGAGTTCGAGCACGCGGAGGGTCTCCGACGGCAGCAAGCCGAGGCTGAGCATGTACTCGC
CTACCACTTTCCTGGCGATCTCCTTCTTTGGCTCGTAGTAGGTGTCGTAGCG---------GCCTTCCACGGCGAGCCGG
AGGACTTGGACGCCTCGCGCCGCCGGGTGGGAGAGAAGCGTGGTGATCACGCTTTGGTCCTGGTCCTGCGACGA---CAA
CCCGTCGCTGCCATATTGCAGGAACCTGCCGTCGACGCCAAACTCGAACTTCACGCGCAGGGTAAGCGTCGTGACGTGGT
CGGCCGCCGCGAGCGCCGCCTGAGCCGCGGAGACGAAGGCGTCGCGCCGGGCGAAGAACGTGGCCTCCAGGCTCTTGCGC
TCCTCTCCCCAGCTTTGGTAAAGTCGTTCTATGCG---TTCGACGTGCGTCTCGAGATTTACGGCCCCCGAGGAGCGCAA
GAGCGGCGAGCGCCAGCGCCGGGAGAGCGCTCTCGTGGAGGCGGCCTCCTTGGCTGGGGCGAAGTGCAGGAGGCGGCGGA
GAAGCTGGTCGGGGAGCGCGGACAGGCGGTCGTCGCCGGCCATCCTCCACGTCCGCGGCTCGATGCGATCACGTTCTCGA
TGGGATGGGATGGGATAGGGAATTAGGGTTTAGGGATCGGATCGGTACGTAGGG-AGAAATACTTTTTT-----------
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-----------------------------------------------------------TTCTTCCGAAAGAAAAAAAA-
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------------------------------------------------------------ATACGTTTACGTATTTGAGC
AGGCAACGACGCAACGTCG-GTTATAAACCGATCTCTAATCCTCCACACGGCATCTCCGATCGAGATC------------
----------------------------------------CTGAGATCGCCGCCGCCAGCCGCGATGTCGAACGGGAGCG
CGAC--GACGAGTCACTCGCACCAGATCGTCGAACGGGAGCGC------GAGCGCGACGACCGTCTGAGCAGTCTCGGCG
ATGTCGTGCTTGGCCATATCCTCTCGTTCCTCGACGCCGACGAGATCGGGCGTGCCGCGGCGCTCTCGAGGCGGTGGCGC
GACGTTCTGGCCATCGTCCACACCGTCTCCCTGGACATGGATGAGCGGCCGAAACAGCCCATCATCTACGACGAGGTGGA
CGACGACTATATGTATTCCACCGAGTACATAAATCACCCGCCGGCGCTGTGGTCCTCAGTCGTCA---------CCGGCG
CCCTCTTTGGCCGCAGCCGCCGCCCGGCCCCCGCGCCCGGCCCGGTGCCCCTGCGTGCGCTCCGCGTTTGCCTGGGAGTG
AGATTGGGATATGATTCCGACCAAAAGACCACGGTGGACCAGTGGGTCACTTACGCCCTGAAGCATGCCGGCCC------
CGACCTCGAGCTTGACCTCCGCCTCGGCCGAGACC---CCATTTGCAAGCACCCCGAACGGGCCGCCCACGCTAGGCGAT
ATGAGGTTAAAGACGTCAGCCGGAAGCCTCCGGAGACCAACGCCGACGACCATTCACCCCATGCGACAGATGACGAA---
---------------GATGGCGACGATGTTGGCTCCAGCTGTGAAGAAAATTTTCGTGGATACG----------------
--------------------------GAGAGTACACCGTCCTGTGGGGGGTTTTCTCCTGCCCCGCGCTGCGATCGCTTC
GCCTTGGCGCTTGCAGGATCTCCCCGCCGGCGGCCTTCAGCATGCCGTGGCTCGAGGCGCTCCGCCTCACACACGTCCCT
GACGAGGAGGAGCACGTGCAAAGGCTCATATCCGCCTGCCCCCACCTCGTGGACCTGACTCTCGAGGCTTGTGGAACGGT
GACCACGCTCTCGCTCCTCGGCAACACGCACCTCCGCAGCCTCGCCCTCCGGTGCTGCCATAAATTAGCCGCCGTTGCCA
TCAACACGTCAGAGCTCCGCTCCTTTGACTACCGCGGTGCCGTCCCAGGCAACTCCTTTCTCACCATGCTCGGCAGCTCG
CCATCTATCATGTCGTTCAAGGTCGACATCTGTGCGGTCTGTGTTGGGGAGGCCACCTCAGAAGAGGAGCTCAGCACGCT
CGGTTCCTTCGTACAGCACTTCGTGTCGACAACGAAACACCTCCACTTATCCTGCGCCTTTATGGGCTCATGCTTCGCAC
GTCTCCCAGCATTCACGAGCCTCCGCTACCTTCAACTGATCGGACACGTGCCACGCGACGGTGACGACCCCGCCGCAGCA
GCTGCCGCGACAAGCAAAATCCTCTGCCAAGCACCGAACCTGCAAACATTGTCCTTGTTGTTCGAAGTAAAGCGTCGCAA
TCCCAATAAGTACGACCCTGATGAGTACGACTACGACGATCGCAGCGAGGGGCAGCTCCTCGATGCTCACCTCCTCAACT
GCAACAAGTACGACACCCTCGACGTTCCGGTGGCGAGCGTGGCCGTGCCGTCCTGCCTCAGGAGTCGGGTCAGGAAGATC
AACCTGTTGCATTACCAAGGTGGAAGGGCGCAGAGGACGCTGGTCCGGTTCTTGGTCCGCAACGCTGAAGTTCTTGAGAA
GCTTTACTGTGGATTCGCCGAGGGGCCGTTGTGGATTCAGAAGGAACTGAAGCGCGAGATTGAACGATGGGCAGTGAACG
AGACAACCAGCAAGGAGTTCCGTTGAC-------TGGATGCTTGTGTGCCTTTGCAATTGCGGTATAACTTCTGATGGAT
TCGTGATAATTTAGTAAATATTGAACAATATTCTCTAAACATTTGGCTCAGTCGA-------------------------
-------CTTAACCATGTCTT-----ATGTTATATTCATGAGATCTTACATTGAGATTCGTGTT---------TTTTTTT
TGCTCTCTTGCATGTTATGTCACTTGACTGAGACTTGGTTAAATCTCATTCGACTGAGACCTAGCCAAACCCGTCATTTA
TTGATTGTCTAGAATGTCTACAGGAATTACAGTTATATATATAGTACATATATATCATGTGGATTGCCCCT-CCCCTGCC
CCTGCCCCCATCTAAATCTAAAGATAAAGCAATCTAAGGAGTACATGTTAGGGTTT------------------------
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-----------------------------------------------------------------------CGATTTGAC
AGTTTCAAATGCCCCAGCAAATAGCTAGCAGCAAGGCCAGTAGTATAAAACTTCTCACCATCAGGTGAAAAGATGTAGTA
TAAAACTTTTCACGTTCAAGTCCTTCTGCTCTAATTGCTGGCTGTTTGTTGTTGGATATGTTGTACGAAAGACGAATATA
AGAAAACGTCCTCAGTAGTGAATTGTGGGCACTCAACTATTTCATGACATTCAGTGGTCGATCATAGGCATTACTTTACT
GCTACATCATCTCTTTTAGTGTCTATATCA--------------------------------------------------
----------------------------------------------------------------------------
>SNPs
---S--------------------------S--------------S-----------------------S--S-------
------S---------------------------------------------------------------S----S----
-----------------------------------------------------------S--------------------
----------------------------S--------------------------------------S------------
----------S-S--S--------------------------------------------------S--------SS---
-----------SS-------------------------------------------------------------S-----
--------------------------------------------------S-----------------------------
------------------------S-------------------------------------------------------
------------------------------------------------------S----------------S--------
-----------------------------------S-----------------S--------------------------
------------------------------------------------------S---S----S----------------
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-----------------------------------------------------------------------------S--
-----------S--SSSS-S-----S------------S---------------------SSS-----------------
---------------------------------------------------------------SS---------------
----SS------------S----------------S-------SSSSSS-----------------S---------S---
-------------------------------------------------S-----------------S------------
-------------------------------------------------------------------------S---S--
---S----SS--S-----------------S-------------------------------------------------
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------------S----------------------------------S--------------------------------
---------------------------------------------------------S----------------------
------------S---SS--S----------------S----------------------S--S------S---------
--------------------S-----------------------------------------------------------
------------------------------------------S-------S-----------------------------
-----------------------------------S----------S--------------------------S-----S
-------------------------------S---------------------------------------S--------
----------------------------------S------------------------------------------S--
------S-S-------------------------------------S---S-----------------------S-----
------------------------------S-------------------------------------------------
--S------------------------------------------------S--S-----S----------S--------
-----------------------------------------------------------S-S------------------
-----------------------S---S--S----------------------------S--------------------
---------------------S---------SS-----------------------------------------------
---------------S--------------SSS--------S--------S----------S------------------
---------------------------------------------------------------S----------------
-----------------------------------------S------S-----------S-------------------
S--S--------S-----------------S------------S-S----------------------------------
---------------------------SS--------------S-S----S----SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--------S-----SSSSS---S-----S-S-----------S------------SSSSSSSSSSS---S---
-S------------S------------S--S------S----------S---------------S---------------
----------------------------S------------------S-----------S-----------S--------
---SS---------S-------------------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
----S--------S--S-------------------------------------------------S-------------
-S----------------S-------------S---------------------------S-------------------
--------------------------S---S-------------------------------------------------
---------------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_87
-------------------------------------------------------------------GTGGATGAGGCTC
TGGAGGT-------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_4261
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------TGACGATGTTGGCTCCAGTT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_3619
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
CGACGAGATGAGTCACTCC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_5503
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------ATAACCAAGTCTCGGTCG
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
