>input_sequence_45070
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-------------------------------------------------------ATGGCGCGCGCGTTCGGCGTCGGCG
CTGCGGTGCTCGTCGTCGTGTCGGCCTTCTTCGCGCCGGCACTAGTGACGGCGCAGACCGGCAGCTGCGACGACCCGCTG
CCGACCGAGCTCGTCGGCAACTACTCCGGGCTGGCCTGCAGCCCCGTCTGGAACAACTTCGTGCTCCGGGTAAGTGCCAC
TGCCGCCGCGACT---------GTAGATCCGGGTGATCTTGAGGGGGACCGGGAGCGTTCTTGATTAATTGCCTCTCACC
GAACCGATTCTGCTGTCTCCTCCAGTACGCGCAGGGCGGGGACAACGTGCTGCGGGTGGTGCTCTCGGCGATGTACAGCT
CCGGGTGGGTGGGGATGGCCTTCTCCAAGGACGGCCTCATGGTGGGCTCGAGCGCCATGGTCGGGTGGGTCGGCAAGAAG
GGGCAAGCCCACGTCAAGCAGTTTGCCCTCAACGGCAAGGCGCCCTCCATGGTCGTCGCCGACAGGGGCTTCCTCGTCTC
CAACGGCCACGCCCACACCGTCCTCGTCAAGCAGGCCAAGATCTACCTCGCCTTCCAGCTCAACTTCGACTCGCAGCTCA
AGAAGCAGCAGGTGCCCTTCGCCTTCGGCTCTGCCATCCCTGTCAACGACCGCCTAGCCGAGCACCAGGGCAAGACGTCC
ATCACCTTTGATTTCACCACAGGTGAGTTGGGTTCCTTCGCGCCTGCTAACCATCTAATGCAAAC-TTAACTTACCGAAT
GGAAATATAAATAGATTTCACATTGTCACCTCGTGCATGATTAATGCACATCTCATTACATGTATGTTTGAAAT--TG--
--------------------------AAACTGTTGCTTCAGTAAATTTAATCGGCTACTGACAAATTCTAACTAAATAAA
TTGT-----AAAAAGTTGCCTGTGACAGTTCAGTGTGATCGATCTGTGGTAATCGAATCAGATACCATAT----------
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-----------------------------------------------------------------------------GTT
TGACAAACCAAATGAGGA-GGCATTTTAACCATTAGTGCAGTGACGACTCAGTCACCAAGTCATTATTTTCTTGAAAACA
ATTTGGCACTTGTTTGCATTGCAGGCAGCTCTTCAGGCTCCTCCTTCCCGAGTGGCCTAAAAAGGACTCATGGGGCACTC
AACCTGTTCGCTTGGGGTGTCCTCCTGCCTATCGGTGCCATTATCGCTCGGTACTGCAGGGGTTGGGACCCTCTGTGGTT
CTACCTTCATGGCGGCATTCAGTTCGTCGGCTTCATCCTCGGTCTGGCCGGCGTTGTGGCTGGAGTATCACTCTACGGCA
AGATCCAAGCAGATGTTCCAGCACATAGAGGCCTTGGCATATTTGTGCTTGTGCTTGGTATCCTCCAGGTA-----TGTG
ATATCTGCTTCCCTATATGGATCTGAGAACTAATGCCATGGAAAATGTGAGCAGTAAAATCTTGTCAAGTGAAGGCATTA
TATATGGATCTGAATGTATGTGTAACTTTGCAGATTCTTGCATTCTTCCTACGGCCCAACAAAGACTCGAAGTACCGGAA
ATACTGGAACTGGTATCACCATTGGGTAGGCAGGCTTGTGCTCTTCTTTGCAGCAGTCAACATTGTCTTGGGAATCAAAG
TTGGAGGCGCTGGTAACCCCTGGAAGATCGGCTATGGGTTTAGCCTGGCCATCCTTCTGATCACCATTATCACCCTGGAA
GTCCTGGTGTGGACAAGGAGGAAAAACAACAGCGGTGCTACGACGACATACTAA--------------------------
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-------------------------------------------------------------------------------
>chr3A_1_TraesCS3A01G266900
CCGGAGCCATCCTCGCCTCGCCTTGCGCGCCTCTGCCCGTGCCCCGCTTGTGTGCGCCGCATCCCGCGAGCTCGCCTCTG
CCCGTACCACGCTCGTTGGCGGCGGCGAACCGGCTGGGCCGCGCGGCGAGCAGGAGGTGGTCAAACGGGCCGGTGGGCGC
ATCGGAGCAGTGCGCCTGCACCTTGGCGTTTGCACAGAGGAGAGATGTGGGGTGGGGTGGGCCATCGAATAAAATAAGCA
GAGGAACGTGGGTGGGTGAGTGACAGGTGGGGCAGGCCTGAACACAGGCGGACGAGGCGAGTGCAGAAAACGTCAGCTTT
GTGTCCGCCGTCGACCCAAATGTGGTTCAAATTTAAAATGGAAATGAATCCGGACACAAAATAGACATGAAACGAAAATG
AATCTGCGCTTGGGTCGATGTTTTTATTCACACTGACCCAAACAAACGGCGGCAGACGAAATGGGCACTACCGTTGGAGT
TGCTCTAATTACGCAAAAACTCATACGAGAAAATCTCTTGCCGTGATGCCCGATCCAATACATCATTCGCGGCTACGGCG
TTGCGCTCTCGGCTCTCTGTCGTGAACCGCGTGGGGGAATGGATCGAGGCCGCCCGTTAAAAAAAGGCGAGGAGGCAGAG
AAGCGGCGCATGCGCACACATGGGGATGGCATTTTTGCCACCCTCGTGTTGCGGTTTGGTTCCAGATCCAGTGACACTGC
TCGCCACGAGACAAGAGCTCCCTGCACCTGCCTCCCGGCCCAGCTCACCGGCGAAGAATATCTTAAGCATACAATCACAA
CTCACAAGCTGCGTCCGTCCAGTTGCAGTCGCCACCCACCACCACTAGAGCCATCACCACATCAAAGAGGCAGAGGACAA
AAAAGAATCCGCACTTGCTTGGCTTTCCAGCTAGTAATTCAGGTTGCCGTCCGGTTACTGGCTCGGCTCCCAGGTGATAC
AGATCG---------------GCCTCTCACGGCGTCGGCGGATCGGCTAGCAGCAATGGCGCGCGCGTTCGGCGTCGGCG
CTGCGGTGCTCGTCGTCGTGTCGGCCTTCTTCGCGCCGGCACTAGTGACGGCGCAGACCGGCAGCTGCGACGACCCGCTG
CCGACCGAGCTCGTCGGCAACTACTCCGGGCTGGCCTGCAGCCCCGTCTGGAACAACTTCGTGCTCCGGGTAAGTGCCAC
TGCCGCCGCGACT---------GTAGATCCGGGTGATCTTGAGGGGGACCGGGAGCGTTCTTGATTAATTGCCTCTCACC
GAACCGATTCTGCTGTCTCCTCCAGTACGCGCAGGGCGGGGACAACGTGCTGCGGGTGGTGCTCTCGGCGATGTACAGCT
CCGGGTGGGTGGGGATGGCCTTCTCCAAGGACGGCCTCATGGTGGGCTCGAGCGCCATGGTCGGGTGGGTCGGCAAGAAG
GGGCAAGCCCACGTCAAGCAGTTTGCCCTCAACGGCAAGGCGCCCTCCATGGTCGTCGCCGACAGGGGCTTCCTCGTCTC
CAACGGCCACGCCCACACCGTCCTCGTCAAGCAGGCCAAGATCTACCTCGCCTTCCAGCTCAACTTCGACTCGCAGCTCA
AGAAGCAGCAGGTGCCCTTCGCCTTCGGCTCTGCCATCCCTGTCAACGACCGCCTAGCCGAGCACCAGGGCAAGACGTCC
ATCACCTTTGATTTCACCACAGGTGAGTTGGGTTCCTTCGCGCCTGCTAACCATCTAATGCAAAC-TTAACTTACCGAAT
GGAAATATAAATAGATTTCACATTGTCACCTCGTGCATGATTAATGCACATCTCATTACATGTATGTTTGAAAT--TG--
--------------------------AAACTGTTGCTTCAGTAAATTTAATCGGCTACTGACAAATTCTAACTAAATAAA
TTGT-----AAAAAGTTGCCTGTGACAGTTCAGTGTGATCGATCTGTGGTAATCGAATCAGATACCATAT----------
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-----------------------------------------------------------------------------GTT
TGACAAACCAAATGAGGA-GGCATTTTAACCATTAGTGCAGTGACGACTCAGTCACCAAGTCATTATTTTCTTGAAAACA
ATTTGGCACTTGTTTGCATTGCAGGCAGCTCTTCAGGCTCCTCCTTCCCGAGTGGCCTAAAAAGGACTCATGGGGCACTC
AACCTGTTCGCTTGGGGTGTCCTCCTGCCTATCGGTGCCATTATCGCTCGGTACTGCAGGGGTTGGGACCCTCTGTGGTT
CTACCTTCATGGCGGCATTCAGTTCGTCGGCTTCATCCTCGGTCTGGCCGGCGTTGTGGCTGGAGTATCACTCTACGGCA
AGATCCAAGCAGATGTTCCAGCACATAGAGGCCTTGGCATATTTGTGCTTGTGCTTGGTATCCTCCAGGTA-----TGTG
ATATCTGCTTCCCTATATGGATCTGAGAACTAATGCCATGGAAAATGTGAGCAGTAAAATCTTGTCAAGTGAAGGCATTA
TATATGGATCTGAATGTATGTGTAACTTTGCAGATTCTTGCATTCTTCCTACGGCCCAACAAAGACTCGAAGTACCGGAA
ATACTGGAACTGGTATCACCATTGGGTAGGCAGGCTTGTGCTCTTCTTTGCAGCAGTCAACATTGTCTTGGGAATCAAAG
TTGGAGGCGCTGGTAACCCCTGGAAGATCGGCTATGGGTTTAGCCTGGCCATCCTTCTGATCACCATTATCACCCTGGAA
GTCCTGGTGTGGACAAGGAGGAAAAACAACAGCGGTGCTACGACGACATACTAACTATGCTTGACTAGGGTTCTTGTTCT
GTGAGCTGCTGAAGGCCCTATTATTTTCATTCGTTTTCTTCTTCTTCTTATGCTGTTGTTGTAAGCATGTAATCTATTCT
GCAGAATCTTTTAGCAGGGATCTGCGAGACTAGTCTATCGGTGATGTGTTTTGGATTTGAAATGTGTAGAGTGT------
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---------------TTGAATGTACTACTCCAATGTTGTTTCTTCCAATGCGTGACGAAGAGTGAATAGTGATATTTTCC
TTGTTCAGCTAATTTAGGGGCATGTTTCGCGTTAGGGGTGGGCATTAAAACCGACAAACTGAAAACCGAACCGACATTGA
AACCAGAAAAAAAAATGAAATTTCGTTTTTTTTT-------AGATCTACTAAACAGTTTTAATTCCGCCAGTTCGGTTTT
TCTCACGCGATTTTATCTCCGCCCATTT--TTTTTTACGGTTAACGGGAAACCGAGTATGGCTGAGATGCAGCTAGCAAG
G-----------------------------TGAGATTCGGAAATCCAACATCCAGGTTTCTCTCCACCTGCAGT-ACCAA
CCATAACATATCGCACACCCTGTCTATTTC--------------------------------------------------
-----------------------------------------------------------------------------TTG
TTGTTGTGCG----TCAAATGTAATGTT--------ACAGCATTTTTTAGAATCTAGTTTTCTTTTTTTCAGGTTTTTT-
-GGCTGGTTTTTCCTTTTTCCCCTTTTTAAAAATTGTAACCATTTTTTGAAAACATGTGAAG--TTTTTTCAAATTTGCA
AACTTCTCTCAAAACACGTG-------------------AACCTTTTTTCGAATGCATGAACTTCTTTCAAGTGCATGAC
CATATTTCAGATCCACAAACTTTTCCTTGATTTCTAAAACAGCAAATTCAGTGAACTCCTTCTCAAATTCGTGAATGATT
TCTTCCTAATCGATGAACATTTTTTAAAATGATGATTTCTGTTTAAATTATTGAACTTTATTCAT-AATTAGGAATTTTT
TGAAATCCATGAAAAAAATTAAAATCATGAATATTTTC-AAATTTTGAACTTTTCCAAATTCTTGAAAA-TATTTAAAT
>chr3D_547
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------------------------------------------------------------------TCGCGGCTACGGCG
TTGCGCTCTCGGCTCTCTGTCGTGAACCGCGTGGGGGAATGGATCGAGGCCGCCCGTTAAAAAAAGGCGAGGAGGCGGAG
AAGCGGCGCATGCGCACACATGGGGATGGCATTTTTGCCACCCTCGTGTTGCGGTTTGGTTCCAGATCCAGTGACAGTGC
TCGCCACAAGACAAAAGCTCGCTGCACCTGCCTGCAGGCCCAGCTCACCGGCGAAGAATATCTTAAGCATACAAA-----
--CACAAGCTGCGTCCGTCCAGTTGCAGTCGCCACCCACCACCACTAGAGCCATCAGCACATCAAAGAGGCAATGGACAA
AAAAGAATCCGCACTTGCTTGGCTTTCCAGCTAGTAACTCAGCTTGTCGTCCGGTTACTGGCTC-----CCAGGTGATAC
AGATCG---------------GCCTTTCACGGCGTCGGTGGATCGGCTAGCAGCAATGGCGCGCGCGTTCGGCGTCGGCG
CTGCGATGCTCGTCGTCGTGTCGGCCTTCTTCGCGCCGGCG---GTGACGGCGCAGACCGGCAGCTGCAACGACCCGCTG
CCGACCGAGCTCGTCGGCAACTACTCCGGGATGGCCTGCAGCCCCGTCTGGAACAACTTCGTGCTCCGGGTAAGTGCCAC
TGCCGCCGCGAGCCAGTAGGCCGTAGATCCGGGTGATCTTGAGGGAGACCGGGAGCGTTCTTG----ATTGCCTCTCACC
GAACCGATTCCGCTGTCTCCTCCAGTACGCGCAGGGCGGGGACAACGTGCTGCGGGTGGTGCTCTCCGCGATGTACAGCT
CCGGGTGGGTGGGGATGGCGTTCTCCAAGGACGGCCTCATGGTGGGCTCGAGCGCCATGGTCGGGTGGGTCGGCAAGAAG
GGGCAAGCCCACGTCAAGCAGTTTGCCCTCAACGGCAAGGCGCCCTCCATGGTCGTCGCCGACAGGGGCTTCCTCGTCTC
CAACGGCCACGACCACACCGTCCTTGTCAAGCAGGCCAAGATCTACCTCGCCTTCCAGCTCAACTTCGACTCGCAGCTCA
AGAAGCAGCAGGTGCTCTTCGCCTTCGGCTCTGCCATCCCTGTCAACGACCGCCTAGCCGAGCACCAGGGCAAGACGTCC
ATCACCTTTGATTTCACCACAGGTGAGTTGGGTTCCTTCGCGCCTGCTAACCATCTAATGCAAAC-TTAACTTACCGAAT
GGAAATATAAATAGATTTCACTTTCTCACCTCGTGCATGATTAATGCACATCTCATTACATGTACTGTATGTTTGATG--
--------------------------AAACTGTTGCTTCAGTAAATTTAATCAGCTACTGACAAATTGTAACTAAATAAA
TTGT-----AAAAAGTTGCCTGTGACAGTTCAGTGTGATCGACCTGTGCTGATCGAATCAGATACCATAT----------
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-----------------------------------------------------------------------------CTT
TGACAAATCAATTGAGGATGGCATTTTAACCATTAGTGCAGTGACGACTCAGTCACCAAGTCATTATTTTCTTGAAAACA
ATTTGGCACTTGTTTGCA-----GGCAGCTCTTCAGGCTCCTCCTTCCCGAGTGGCCTAAAAAGGACTCATGGGGCACTC
AACCTGTTCGCTTGGGGTGTCCTCCTGCCTATCGGTGCCATTATCGCTCGGTACTGCAGGGGTTGGGACCCTCTGTGGTT
CTACCTTCATGGCGGCATTCAGTTCGTCGGCTTCATCCTCGGTTTGGCTGGCGTTGTGGCTGGAGTATCACTGTACGGCA
AGATCCAGGCAGATGTTCCAGCACATAGAGGCCTTGGCATATTTGTGCTTGTGCTTGGTATCCTCCAGGTACTGTATGTG
ATAAATAAATAACCTGC----TCTAAGAACTAATGTCATGGACAATGTGGTCAGTAAAATCTTGTCAACTGAAGGCATTA
TATATGGATCTGAATATATGTGTAACTTTGCAGATTCTAGCGTTCTTCCTACGGCCCAACAAAGACTCGAAGTACCGGAA
ATACTGGAACTGGTATCACCATTGGGTAGGCAGGCTTGTGCTCTTCTTTGCAGCAGTCAACATTGTCTTGGGGATCAAAG
TTGGAGGCGCGGGTAACTCGTGGAAGATCGGCTATGGTTTCAACCTGGCCATCCTTCTCATCACCATTATCACCCTGGAA
GTCCTAGTGTGGACAAGGTGGAAAAACAACAGCGGTCCTGCGACGACGTACTGACAATGCTTGACTAGGGTTCTTGTTCT
GTGAGCTGCTGAAGGCCCTATTATTTTCATTCGTTTC---CTTCTTCTTATGCTGTTGTTGTAAGCATGTAATCTATTCT
GCAGAATCTTTTAGCAGGGATCTGCGAGACTAGTCTATCGGTGATGTGTTTTGGATTTGAAATGTGTAGAGTGT------
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---------------TTGAATGTACTACTCCAATGTTGTTTCTTCCAATGCGTGACGAAGAGTGAATAGTGGTATTTTCC
TTGTTCAGCTAATTTAGGGGCTATTTCTTGTTC-----------------------------------------------
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-----------------CCTTGTCTATTTCAAAAATGCTCCCCTGCGATTCTAAAAAATGCTATAACATTACATTTGTCT
ATTTTCCTTGTTCAGCTAATTTAGGGGCTTATTCCAAAAAACTCTCTTGTTCATTATTTTCCCTTGTCTCTTTCTTGTTG
TTGTTGTGCG----TCAAATGTAATGTT--------ACAGCATTTTTTAGAATCTGGTTTTCTTTTTTTCAGTTTTTTTT
TGGCTAGTTTTTTTTGGCTCCCC-----------TGTGACCATTTTTTGAAAACATGTGAAG---TTTTTCAAATTTGCA
AACTTTTCTCAAAACACGTGAACTTTTTTCAAATTCGTGAACCTTTTTTCGAATGCATGAACTTCTTTCAAATGCATGAA
CATATTTCAGATCCACAAACTTTTCCAAGTTTTCTAAAACAACAAGTTCAGTGAACTCCTTCTCAAATTCGTGAATGTTT
TCTTCCTAATCGATGAACATTTTTAAAAATGATGATTT-TTTTCAAATTAGTGAACTTTTTTCAT-AATTAGGAATTTTT
CGAAATCCATGAATTTT-TTTAAATCGTGAATATTGTC-AAATTTTGAACTTTTCCAAATTCTTGAAAAATATTTAAAT
>chr3B_572
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-----------GCTTTCTGTCGTGAACCGCATGGGGGAATGGATCGAGGCCGCCCGTTAAAAAAAGGCGAGGAGGCAGAG
AAGCGGCGCATGCGCACACATGGGGATGGCATTTTTGCCACCCTCGTGTTGCGGTTTGGTTCCAGATCCAGTGACAGTGC
TCGTCACAAGACAAAAGCTCGCTGCGCCTGCCTCCAGGCCCAGCTCACCGGTAAGGAATATCTTAAGCATACAAT-----
--CACAAGCTGCGTCCGTCCAGTTGCAGTCGCCACCCACCACCACTAGAGCTATCACCGCATCAACGAGGCAGAGGACAA
AAAAGAATCAGCACTTGCTTGGCTTTCCAGCTAGTAATTCAGCTTGCGGTCCGGTTACTGGCTC-----CCAGGTGATAC
AGATCGTGCTACCACCGCTAGGCCTTCCAGGGCGTCGGTGGATCGGCTAGCAGCAATGGCGCGCGCGTTCGGCGTCGGCG
CTGCGATGCTCGTCGTCGTGTCGGCCTTCTTCGCGCCGGCG---GTGACGGCGCAGACCGGCAGCTGCGACGACCCGCTG
CCGACCGAGCTCGTCGGCAACTACTCCGGGATGGCCTGCAGCCCCGTCTGGAACAACTTCGTGCTCCGGGTAAGTGCCAC
TGCCGCCGCGAGCCACTAGGCCGTAGATCCGGGTGATCTTGAGGGGGACCGGGAGCGTTCTTG----ATTGCCTCTCACC
GAACCGATTCTGCTGTCTCCTCCAGTACGCGCAGGACGGGGACAACGTGCTGCGGGTGGTGCTCTCCGCGATGTACAGCT
CCGGGTGGGTGGGGATGGCGTTCTCCAAGGACGGCCTGATGGTGGGCTCGAGCGCCATGGTCGGGTGGGTCGGCAAGAAG
GGGCAAGCCCACGTCAAGCAGTTTGCCCTTAACGGCAAGGCGCCCTCCATGGTCGTCGCCGACAGGGGCTTCCTCGTCTC
CAACGGCCACGCCCACACAGTCCTTGTCAAGCAGGCCAAGATCTACCTCGCCTTCCAGCTCAACTTCGACTCGCAGCTCA
AGAAGCAGCAGGTGCTCTTCGCCTTCGGCTCTGCCATCCCTGTCAACGACCGCCTAGCCGAGCACCAGGGCAAGACGTCC
ATGACCTTTGATTTCACCACAGGTGAGTTGGGTTCCTTCGCGTCTGCTAACCATCTAATGCAAACTTTAACTTACCGAAT
GGAAATATAAATAGATTTCACTTTGTCACCTCGTGCATGATTAATGCACATCTCATTACATGTATGTTTGAAAT--TGTT
TTTTTTTCTGCGACTAATATGTTTGAAAACTGTTGCCTCAGTAAATTTAATCAGCTAAGAGCTTTTGTTGTCTAGTACTC
CTACCTGACAAAAAGTTGCCTCAGA----TCAGTGTGATCTATCTGTGCTGATCGAATCAGATACCATATCTTTGACAAA
GGGCAACGATCTGCGCCGGTGCGCCGGCCCAACTGTTGGGCCGGTCGCACCGCGGCCGTTGGATCTGAGCTAGTGGGCCG
TTGGATCCGGCTGAACAAGTTCGCCCTATCGTCTTCTACCTCGCACCACGGCGTCGCGCCTCCTACCGCCCCCGCCGCTC
CAAGCGTTGCGCAGCCCCTCCCCTCTCCCCTCCCCCCCGCCCCCGGTCGTCCTCGTCTCCGTGCTCGCCGCCGGTCGCCG
TAGCCGCTCGCCGTCGCTGCTGCAGCAACATTGTAACTGCTAGCCGCTCGCTGTTGTTGCTTTGCCCCATGCAACAGCCC
CACCCTGCGGTTGAAGCTTTTGTTGAGACCGTTGTAGCTCCGGTTGCAACGACTGAAGCTCGCCGGCATGCTCGCCGCCG
CTCATCCCCGGTGTGCATCTTGCAAACAAAAAATCGAGCACCGGGGAAGATGCCCAGTGCTACAACCAACGACCAAAAAA
GCTACAACTAGCGATAGAAAAAGCTTCAACCGGCTACGGAAAAAGCTTCAACCAGTATACGACTAGAGCCATGGATGACC
AAGAAAAGTTACAACCGTTGACAGAAAAAGCTTCATCTAGCGACGAAAAAAGCTTCATCCGACTATAAAAAAAGTTTCAA
CCGTGGAATCGAAGCCATGGACGAAAAACGAAAAGTTGCAACCCACAGTTACAAAAGTTACAACCGCATTGAAAAAAGCT
TCAAACTTCTTATCTCAGCTGCGACCCCGCGATGACGATGACGCCGTTTTGCTGCAACCGTAGTAGATTTTTGCTACCAC
CGGCGAGTGAATTTGTTACAACCGGTTCCAGCAAAATTTCGCCGCGGGCTGTAGTCTGCCATGGCTGGTTGCGGCTCCAG
CGTGGCCGGGTCCGGCGAGGTAGGCAGAGCTCCGATGCATGCGGATCCGCGCGGATCTGGTCGAGGGCGGCCAGATCGGC
TGATTCTCATGACGGCGGCGGCCCTGGGAGGCCTCCGGCGTGGGCGATGGGTTGACCATGGCAACGGGGAGAGAGGAGAG
AGAGATGGCCGAGAGGAAGAAGAGAAAAGGCAGGAGGGAGAAGACGCACATGGGCGGGCCCTCCAATCCTACGTGTCGCT
AGGCGAGTCGCTGGCGCGTTTGCGCGTGGCCGCGACCAGCCGAAGCTTCGGCCGGTGCGCCGTTGCCAAACGATTCCCTT
TGACAAATCAATTGAGGAGGGCATTTTAACCATTAGTGCAGTGACGAATCAGTCACCAAGTCATTATTTTCTTGAAAACA
ATTTGGCACTTGTTTGCA-----GGCAGCTCTTCAGGCTCCTCCTTCCCGAGTGGCCTAAAAAGGACTCATGGGGCACTC
AACCTGTTCGCTTGGGGTGTCCTCCTGCCTATCGGTGCCATTATCGCTCGGTACTGCAGGGGTTGGGACCCTCTGTGGTT
CTACCTTCATGGCGGCATTCAGTTCGTCGGCTTCATCCTCGGTCTGGCCGGCGTTGTGGCTGGAGTATCACTGTACGGCA
AGATCCAAGCAGATGTTCCAGCACATAGAGGCCTTGGCATATTTGTGCTTGTGCTTGGTATCCTCCAGGTA-----TGTG
ATAAATAAATAACCTGC----TCTAAGAACTAATGTCATGGACAATCTGGTCAGTAAAATCTTGTCAACTGAAGGCATTA
TATATGAATCTGAATATATGTGTAACTTCGCAGATTCTAGCGTTCTTCCTAAGGCCCAACAAAGACTCGAAGTACCGGAA
ATACTGGAACTGGTATCACCATTGGGTAGGCAGGCTTGTGCTCTTCTTTGCAGCAGTTAACATTGTCTTGGGGATCAAAG
TTGGAGGCGCGGGTAACTCGTGGAAGATCGGCTATGGTTTCAACCTGGCCATCCTTCTCATCACCATTATCACCCTGGAA
GTCCTAGTGTGGACAAGGTGGAAAAACAACAGCGGTCCTACGACGACATACTGACTATGCTTGACTAGGGTTCTTGTTCT
GTGAGCTGCTGAAGGCCCTATTATTTTCATTCGTTTT---CTTCTTCTTATGCTGTTGTTGTAAGCATGTAATCTATTCT
GCAGAATCTTTTAGCAAGGATCTGCGAGACTAGTCTATCGGTGATGTGTTTTGGATTTGAAATGTGTAGAGTGTCCTCAA
ACTCGTCAGGAACAGTCCTTCCAACTCGCGCTAGGGTTCCCCCGCTCCCCTCCCGCCGCCGCCGGCCGTCGGCCCCGCCC
CCCCGCCTCCGCCCCCTTCCGCCCTACCCCCCCTCCGTCTTGGCTGCCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGCTCCTTGGCGGCGGGGCGGCGTGGTGGTGCCGGGTGGCCGTCGACGCGCCCCCGGCCCAGATCCGGGCACGTCGGGC
CCCATCTGGGCCCCTGGGGGCCGGCCCCTGCATGGTCTCGTTGTTTGCGACGCGGTGAGGAGGAGGAGCGGCTCGGACTT
GGGGCGTCGGCGTCGATGGCGTGCCGGCAGCAGCGCGAAGGCGGGAGCTTTACGGGCCCACGAGGGCTCGGCCATGCCTG
TGGGCCTACGGGCCTGGTGTGCTCCTGCTATTGCGTCCGGACGGCTACTGTCGCTGACGGTGGAGGTGGGGCCCTCCCGC
GTGCCGATGGTGCTGATGCCCTAGTCCCGGCTCTGATTCTTCGTCGTGCTGTTCTCACTTCGCGGTGCCGTGGTGAGTCG
GCGTGGAGGCCTCATGACCGCGTTGGCGTAGGGTGGTGGTTGGTTTGGTGGCGGGATCCGGAGCGCCCGAGGTGCGGGTT
GGGATCGGGGGAAACCCCTGTCGGCGTGGCCGACCCCGGCGCGGTGGCGCCTGTGGGTGCCGCCTGACCTTCCGGGAGGG
CGTCGGGGACTACTCTTCCTATCGCCTCGTCGTGTACCGGGGGAAACCCTTGGCAGCAGCGTCGTCATCGTTGCGATCCT
TCTTGGAGGTGTTGATTGGTGCCGGCGCTTCGGAGTCTTGGAGCCTAGTGGATCAGACCGATGGGCCTAGCGATCGCGAG
GCTTCTTCGTTTTTGTTGATCCGCCGTTGTCCATTTGTTTCTTTTGCTCTTTCTCTGTTGTTTCTTTTGGGCGTGACTGT
GCTGCTTCCGCCCCAGCACCTATCCCTGTATGATCCGGTTGGTTGCTTTGTATACAAAGCGGGGGGAAACCCTTTTTCGG
CAATGTGTAGAGTGTTTGAATGTACTACTCCAATGTTGTTTCTTCCAATGCGTGACGAAGAGTGAACAGTGGTATTTTCC
TTGTTCAGCTAATTTAGGGGCATGTCTCGCGTTAGGCGTGGGCATTAAAACCAACGAACTGAAGACCGAACCGACATTGG
AACC-GAAAAAAAAATGAAATTCCGTTTTTTTTTTGTTTTTAGATCTACTAACCAGTGTTATTTCGGCCAGTTTGGTTTT
TCTCACCTGATTTTATTTCCGTCCGTTTGGTTTTTTATGGTTAACGGGAAACCGAGTATGGCTGAGATGCAACTAACGAA
CTACCCAAAGTCAGCAAAAGGTGAGCCAATTGAGATTCAAAAATCCAACCTCCAGATTTTTCTCCACCTTCTGTAACCAA
CCATAACACATCGCACACCTTGTCTATTTC--------------------------------------------------
-----------------------------------------------------------------------------TTC
TTGTTGTTCTGGTCTCACATGTAATGTTAAAAAAAGACAGCATTTTTTAGAATCTGGTTTTCTTTTCT------------
--------------------CCCCTTTTTAAAATTGTGACCATTTTTTGAAAACATGTGATTTTTTTTTTCAAATTCGCA
AACTTTTTTCAAAACATGTGAACTTTTTTCAAATTCGTGAACCTTTTTTCGAATGCATGAACTTCTTTCAAATGCATGAA
CATATTTCAGATCCTCAAACTTTTCCAAGTTTTCTAAAATAACAAATTTAGTAAACTCCTTCTCAAATTCATGAATG-TT
TCTTCCTAATTGATGAACATTTTTCAAAAATGATGATT-TTTTCAAATTAGTGATTTTTCTTTCGAAATTATGAACATTT
TGGAACTCATGAAAATT-TTTAAATCATGAATATTTTCAAAATTTGGAACTTTTCCAAATTCTTGAAAA-TATTTAAAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
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----------------------------------------------------------------------------S---
-------S------S-----S--------------S---------------------------------------SSSSS
SS------------------------------------------------------------------------------
------------------------------------------S---------------------SSSSS-----------
-------------------------S------------S-----------------------------------------
-----S----------------------------------SSSS------------------------------------
------------------------------S-------------------------------------------------
-----------SS--------------------------------------------------SSSS-------------
------------------------------------------------------------------S-------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
---------------S----------------------------------------------------------------
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---------------------S----------------------------------------------------------
----------------------------------------------------S--------------S------------
------------------------------------------------S-S-----------------------------
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-----------------------------------------------------------------------------S--
-------S---S--------------------------------------------------------------------
------------------SSSSS---------------------------------------------------------
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------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
---SS-SSS-SS-SSSSSSSS---S----------S------S------SS-----------------S-----------
---------------S----------------------S--S--------------------------------------
------------------------------------------------------------------------S-------
----------S------S-S-----------------S--S-S---------------S---------------------
-----S------------S-----------------S---------------S---------------------------
-------------------------------------SSS----------------------------------------
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-----------------------------------------------------------------------S--------
------------------------------------S---------------S--S-------S---------------S
----S-----------------S-----------------------------S----S---S---S-------S------
------SS--------S----S--S------------S---------------------------------S---S-S-S
S-------------------------------------SS---------S-----S---S---------S-S--------
--------S----------S------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S----------------S-------
-----S------SS-SSS-----S----S--------S------------------------------------------
-----S-----------------------------------------------------------------S-------S
--------------------------SS-S-----------S-----------------------------------S--
------------------------S-------------S-S--S------S--------S--------------------
---------------SSS--S----------------------------------------------------------
>forward_540
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CCGTGATGCCCGATCCAATA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_1545
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------CGTCAAGCAGGCCAAGATCT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_1266
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GACCGGGAGCGTTCTTGATT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_3939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AGGAAAAACAACAGCGGTGC------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_3303
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TGGCACTTGTTTGCATTGCA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_5906
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CGCCAGTTCGGTTTT
TCTCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
