>input_sequence_45060
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-----------------------------------------------------ATGGCGGATAGCAGCAACAGCCCGTCG
ACCTCGGTGTCCGACGAGAGCTCCGAGGCGGAGGCGCAGTGCTGCTCGTCGTCGTCCACGGCGCCGAGCCTGCACGACAC
GGTGGACTTCAGCCGCACCGCCTCGGACGTGTCCACCTTCTCGGACCGCAGCGTTGACCACAGCGGGCCCTTCGGGACGG
CCGCCGTGTCCAAGCTCATCGGCGGCCGCGGCTCCCCCGCCGCCGCGCTCAGCCGGCTCAGCATGAAGCCCCGCGCCGAC
GTGCTCGACCGCCGCTCCGCCGAGGACGAGCTGGACCTGGTCAAGGAGCGGTTCTCCAAGCTGCTGCTGGGCGAGGACAT
GTCCGGCGGCGGCAAGGGCGTCTGCACCGCCGTCGCCATCTCCAACGCCATCACCAACCTCTACGCCACGGTCTTCGGGA
ACTGCCACAAGCTGGAGCCGCTGCCGGCGGGGAAGAAGGCCATGTGGAGGAGGGAGATGGACTGCCTCCTCGCCGTCTGC
GACTACATCGTCGAGTTCTACCCCTCCACGCAGCCGCTCTCCGACGGCACCCGCGTCGAGGTCATGGCCACCAGGCCAAG
ATCCGACATCTACATCAACCTCCCCGCCCTCGAGAAGCTCGACGCCATGCTCATCGTAAGTA--GTAGATGATCTTTCTT
CCGACGACGAGGTGATGATCTTTCTTTGTTCTGAATTCTGACCAGTGCCAACGAAATGTGTCGTTGACATGCGCAGGAGA
TCATGGACAGCTTCCAGAAGGCGGAGTTCTGGTACGCGGACGCCGGGACGAGGTCGTTCGGGTCGGTGACCTCGTCGTCC
TCGCCGTCGTCGTCGTTCCGGCGGTCTACG---ACGACGGCCCACCGGAACGAGGACAAGTGGTGGGTGCCGGTGCCGTG
CGTCCCGGAGGGCGGGCTGTCCGTGAAGGCGCGCAAGGAGCTCCGGCAGAGGCGCGACTGCGCGAACCAGATCCACAAGG
CGGCCGTGGCCATCAACAGCGGCGTGCTGAGCGACATGGAGGTGCCGGAGTCGTTCATGGCGCTGCTCCCGAAGAGCGGC
AAGGCGAGCGTGGGGGACGCGGTGTACCGCGCCATGCACAGCTCCGACAAGTTCTCGCCGGACTACCTCCTGGACTGCGT
GGACGTGTCGTCGGAGCACGAGGCGCTGGCGCTGGCCGACCGGGTGGAGGCGGCCATGTACGTGTGGCGGCGCAAGGCGA
CGGCGAGCCACGGCGTCGGGAGGTCGGCGCAGTGGAGCCGGGTCAAGGAGCTCGCCGCGGCCGCCGACGACGGCGGCGAG
GGCGGCAAGAACGTGGCGCTGGCCGGCAGGGCCGAGAGCCTCCTCCTCTGCATCAAGCACCGCTTCCCCGGCCTCTCCCA
GACCACCCTCGACACCAGCAAGATCCAGTTCAACAAGGTAGCCAATCAAATCAACAACAGCATCCCATATCTGCATCATC
TGAATTTGACACCAAGATA----CATTTATCTCAACTTGA--------------------------ATGATCATCAGTTC
ATCACACACTTGAATCTTGATGAAGATGGAATGCTGTTTTCTGATGGGGTGAGATGGATGTTATTTCTTGTGTAGGATGT
TGGGCAGGCGATCCTGGAGAGCTACTCGAGGGTGCTGGAGAGCCTGGCGTTCAACATCGTGTCGTGGACGGACGAGGTTC
TTTTTGCCGACAAGGCTGCCAGGAAATGA---------------------------------------------------
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>chr1A_1_TraesCS1A01G208700
GTTTGCAAGGTATTTTCGTTCACTTTTCTCAATCAATGGATTGTCTGTGATATTTCCGTGTCATTTAAACATGCATTGTA
TGGCATAATGCTTAAAATGTGTAACTAGAAAGCATGCTAAGCCAGCTTGGAGTGGAAATTCCTGTGT-------------
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-------------CATTTTCCCCTCTTCTTTTATATGTCCAATATACAGAATATTATACT--------------------
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----------------------------------------------------------------------ACATCACAAA
GATTAGCAATGATCCAGCCCACCAATACCATGGTTGACTATCCCTTAATTTCATACACGCAAACATAATCCTGCCCCGAT
TTCTTTAGACAGACACTTCCTTCCCACGACCAATAAAATA----AGGGAAACAAATCCCTAATCCCTCCCTATGGCATGA
CCACTTTCCATGACCAAGGAAA--ACATACCATCCATTGCCCACATTGCCGCTTCTCCCCTCTGTGATCTGCCATTGTCG
AGAGAGAGAAAA-GGGAGACCTGCCAGAGCAGAGAGGAAGCTGATAGAGGGAA-CACTTAGAGAGAACACAAGAGCTTTT
CTTCCTCCAATGCATATGGCAAGGACAAGCAGATCATTGGCTTAGGGATCAAATCAGCGGCACAAAAGGTACTAATTTGC
TTCCCCTTCCCATTTGATTCCTTTGATTTGCATCCAGCAGCCAAGAAGAATGTGTGGTGGAATTACGAAAAGCCGTGCTT
GTTTTCTTCCCATGCATCTAAAGAAGATTCAAAAGCAAAAGCATTTCATGCCTACTTTCTTGCGATCTGCATGGCATGCT
CATCAGAAGTA---------------------GCCATCGTCTAAAAAGCAGCAAATCAAGATGTAAAAAACAAGAATGAA
TCGCTCAAATTTCGGGAAATGCGCTTAAATTTTGTGTTA-ACGCACAGGAGTTCAAATCTTGTCCTGTGCTCCCATTTCG
ATGGATTTGTCGCGCCATTCG---------CGAGAATTCACCGGGACCCTTTCCTTATAAAGCAGGTGTAGTAC------
------------ACGAAGGAAGGAAGGAAGGAAGCCAAGAACCAACCGCTGCCATGGCGGATAGCAGCAACAGCCCGTCG
ACCTCGGTGTCCGACGAGAGCTCCGAGGCGGAGGCGCAGTGCTGCTCGTCGTCGTCCACGGCGCCGAGCCTGCACGACAC
GGTGGACTTCAGCCGCACCGCCTCGGACGTGTCCACCTTCTCGGACCGCAGCGTTGACCACAGCGGGCCCTTCGGGACGG
CCGCCGTGTCCAAGCTCATCGGCGGCCGCGGCTCCCCCGCCGCCGCGCTCAGCCGGCTCAGCATGAAGCCCCGCGCCGAC
GTGCTCGACCGCCGCTCCGCCGAGGACGAGCTGGACCTGGTCAAGGAGCGGTTCTCCAAGCTGCTGCTGGGCGAGGACAT
GTCCGGCGGCGGCAAGGGCGTCTGCACCGCCGTCGCCATCTCCAACGCCATCACCAACCTCTACGCCACGGTCTTCGGGA
ACTGCCACAAGCTGGAGCCGCTGCCGGCGGGGAAGAAGGCCATGTGGAGGAGGGAGATGGACTGCCTCCTCGCCGTCTGC
GACTACATCGTCGAGTTCTACCCCTCCACGCAGCCGCTCTCCGACGGCACCCGCGTCGAGGTCATGGCCACCAGGCCAAG
ATCCGACATCTACATCAACCTCCCCGCCCTCGAGAAGCTCGACGCCATGCTCATCGTAAGTA--GTAGATGATCTTTCTT
CCGACGACGAGGTGATGATCTTTCTTTGTTCTGAATTCTGACCAGTGCCAACGAAATGTGTCGTTGACATGCGCAGGAGA
TCATGGACAGCTTCCAGAAGGCGGAGTTCTGGTACGCGGACGCCGGGACGAGGTCGTTCGGGTCGGTGACCTCGTCGTCC
TCGCCGTCGTCGTCGTTCCGGCGGTCTACG---ACGACGGCCCACCGGAACGAGGACAAGTGGTGGGTGCCGGTGCCGTG
CGTCCCGGAGGGCGGGCTGTCCGTGAAGGCGCGCAAGGAGCTCCGGCAGAGGCGCGACTGCGCGAACCAGATCCACAAGG
CGGCCGTGGCCATCAACAGCGGCGTGCTGAGCGACATGGAGGTGCCGGAGTCGTTCATGGCGCTGCTCCCGAAGAGCGGC
AAGGCGAGCGTGGGGGACGCGGTGTACCGCGCCATGCACAGCTCCGACAAGTTCTCGCCGGACTACCTCCTGGACTGCGT
GGACGTGTCGTCGGAGCACGAGGCGCTGGCGCTGGCCGACCGGGTGGAGGCGGCCATGTACGTGTGGCGGCGCAAGGCGA
CGGCGAGCCACGGCGTCGGGAGGTCGGCGCAGTGGAGCCGGGTCAAGGAGCTCGCCGCGGCCGCCGACGACGGCGGCGAG
GGCGGCAAGAACGTGGCGCTGGCCGGCAGGGCCGAGAGCCTCCTCCTCTGCATCAAGCACCGCTTCCCCGGCCTCTCCCA
GACCACCCTCGACACCAGCAAGATCCAGTTCAACAAGGTAGCCAATCAAATCAACAACAGCATCCCATATCTGCATCATC
TGAATTTGACACCAAGATA----CATTTATCTCAACTTGA--------------------------ATGATCATCAGTTC
ATCACACACTTGAATCTTGATGAAGATGGAATGCTGTTTTCTGATGGGGTGAGATGGATGTTATTTCTTGTGTAGGATGT
TGGGCAGGCGATCCTGGAGAGCTACTCGAGGGTGCTGGAGAGCCTGGCGTTCAACATCGTGTCGTGGACGGACGAGGTTC
TTTTTGCCGACAAGGCTGCCAGGAAATGAACAGTGAGCGACGGACCAAACCTGACGGACGGATTCGTCGAGAGAACGAAC
GAACGAACGCTCTTACATAAGAGCAAAATGTACTTACTTTCGAGCCTTGTTCCCAGCTCTCTGTGATGGGAAACGGCGTA
GGTTAGGATGATGAT---CTCACGGTAACTTTTGTACCGTGAGATTTCTACTACTGACGTAGTCAAGGATTTGCAAGGTT
TATATATCTTGCAAAGAGAATATGCAGAGTTTGTCTGACCAACAGTGTGTGTCCTGTAAGATA--------TTTTTTGGC
TTTTTCATCTGATTTTCAGGTTGTGCCTGACCAACAAAACAGTGTGTGTGTTTTACCCC--TTTCTTGCTCATCGATCTT
GGTAAAGTTAAGGACCAAGTGCGA-------TGCCTGGTAGCTAGGAATGTCAAAAAACTTGTTATATATCAGAGTTAGG
ACTGGGACATCCAACTTAACA--AGAAATAAATAATCACATTCATTCATGACCGTCTATAAGCCTTAGAGAA--------
-----AGTTGAATTTACTGCGACAATAACATTTGAAAGTTGGTGATCAAATGCACTGCACTTCATACACACACGACGTCT
TATATTTTGAGACAGAGGAA-------GTAGTTGACATCTACTTTTATTAACAGCAAATACAGGTAGAGCGCATGT-TTA
TCCAAGGAAACAAGGAGTTGTCTAACTTAACTTAGAATACACTGATATTTCGGAAAATGAAGACCATGTAGTAGCATTTG
ATCTGTCATA---TATTATGGTAACTGTTACACATGTGTGATTCTCGAAAAACTATTACACATGTACACACAAACACAAA
GAAAAGGAAAAAAACAATATACATGTGTGATCACCTCTGATCACAATGTACAAGAGGAAAATCCGCAAAGCCTTTCAGAC
TGCTGTGCATTTTAGCTGTCCAAGAGGCATGGCTGTGACAGTTA-CCCAAACTTCATCTAGTCTAGACAAGCTGCACGGC
TGGGAGGTTTGCAGGTCGAAACTTCCGCTGTCATGC
>chr1D_3
--TTGCAAGGCATTTTCGTTCACTTTTCTCGATTAATGGATTATCTGTGATATTTCCGTGTCATTTAAACATGCATTGTA
TGGTATAATGCTTAAAATGTGTAACTGTATTTTTAACACAGTACAGACGCAAGCGCTCATATACACGCGCATACACTCAC
TCCTATGAACGCACACACGCACACCCTACCCCTATGAGCACCTTCGAAAGACTGAGCCGGCATATCATCTTGAAATTTAC
GAAGTCATCGTAGGCACCTCGTTGTCGAGGGGAACGTCTCCTCCCACTTCCTGAAATAAATCCAGGAATAAATGCGAGCG
AGCATCAGAATTTGAACCCTGATGAGCCGGGATACCACGGTCCCTCTAACCATCTAACCACAGGTTGGTTCGCCTTAAAA
TGTGTAACACAAACATTTCCCCCTCTTCTTTTATCTGTCCAATATACAGAATATTATACT--------------------
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----------------------------------------------------------------------ACATCACAAA
GATTAGCAATGATCCAGCCCAGCAATACCACGGTTGACTATCCCTTAATTTCATACACGCAAACATAATCCTGCCCCGAT
TTCTTTAGACAGACACTTCCTTCCCACGACCAGTAAAATA----AGGGAAACAAATCACTAATCCCTCCCTATGGCATGA
CCACTTTCCATGACCAAGGAAAA-ACATACCATCCGTTGCTCACATTGCCGCTTCTCCCCTCTGCACGTTGCCATTGTTG
AGAGAGAGAAAA-GGGAAACCTGCCAGAGCAGAGAGAAAGCTGATAGAGGGAA-CACTTGGAGGGAACACAAGAGCTTTT
CTTCTTCCAGTGC--ATGGCAAGGCCAAGGAGATCATTGGCTTA-GGATCAAATCAGCGGCACAAAAGGTAATTTGCTTA
A----CTTCCCATATTATTCCTTTGATTTGCATCCAACAGCCAAGAAGAATGTGTGGTGGAATTGCAAAAAGGCGCGCTT
GTTTTCTTCCCATGCATCTAAAGAAGATTCAAAAGCAAAAGCATTTCATGGCTACTTTCTTGCGATCTGCATGGCATGCT
CAAGTAGCCGTGGATTGGTATGGAGTCACCTCGCCATCGTCTAAAAAGCAGCAACTCAAGATGTTAAAAACAAGAATGAA
TCGCTCAAATTTCGGGAAATGCGCTTAAATTTTGCACTTCACGCACAGGAGTTCAAATTTTGTCCAGTGCTCCCATTTCG
ATGGATTTG---------TCG---------CGAGAATTCACCGGGACCCTTTCCTTATAAAGCAGGACTAGCTAACTGTA
CTGCACGAAGGACGGAAGAAAGGAAGGAAGGAAGCCAATAATAACC-------ATGGCTGACAGCAGCAGCAGCCCGTCG
GTCTCGTTGTCCGACGAGAGCTCCGAGGCGGAGGCGCAGTGCTGCTCGTCGTCGTCCACGGCGCCGAGCCTGCACGACAC
GGTGGACTTCAGCCGCACCGCCTCGGACGTGTCCACCTTCTCGGAGCGCAGCGTTGACCACAGCGGGCCCTTCGGGACGG
CCGCCGTGTCCAAGCTCATCGGCGGCCGCGGCTCCCCCGCCGCCGCGCTCAGCCGGCTCAGCATGAAGCCCCGCGCCGAC
GTGCTCGACCGCCGCTCCGCCGAGGACGAGCTGGACCTGGTCAAGGAGCGGTTCTCCAAGCTGCTGCTGGGCGAGGACAT
GTCCGGCGGCGGCAAGGGCGTGTGCACCGCCGTCGCCATCTCCAACGCCATCACCAACCTCTACGCCACGGTGTTCGGGA
ACTGCCACAAGCTGGAGCCGCTGCCGGCGGGGAAGAAGGCCATGTGGAGGAGGGAGATGGACTGCCTCCTCGCCGTCTGC
GACTACATCGTCGAGTTCTACCCCTCCACGCAGCCGCTCTCCGACGGCACCCGCGTCGAGGTCATGGCCACCAGGCCAAG
ATCCGACATCTACATCAACCTCCCCGCCCTCGAGAAGCTCGACGCCATGCTCATCGTAAGTACAGTAGATGATCTTTCTT
CCGACGACGAGGTGATGATCTTTCTTTGTTCCGAGTTCTGATCAATGCCAACAAAATGCGTCGTTGACATGCGCAGGAGA
TCATGGACAGCTTCCAGAAGGCAGAGTTCTGGTACGCAGACGCCGGGACGAGGTCGTTCGGGTCGGTGACCTCGTCGTCC
TCGCCGTCGTCGTCGTTCCGGCGGTCTACG---ACGACGACCCAGCGGAACGAGGACAAGTGGTGGGTGCCGGTGCCGTG
CGTCCCGGAAGGCGGGCTGTCCGTGAAGGCGCGCAAGGAGCTCCGGCAGAGGCGCGACTGCGCGAACCAGATCCACAAGG
CGGCCGTGGCCATCAACAGCGGCGTGCTGAGCGACATGGAGGTGCCGGAGTCGTTCATGGCGCTGCTCCCGAAGAGCGGC
AAGGCGAGCGTGGGGGACGCGGTGTACCGCGCCATGCACAGCTCCGACAAGTTCTCGCCGGACTACCTGCTGGACTGCGT
GGACGTGTCGTCGGAGCACGAGGCGCTGGCGCTGGCCGACCGGGTGGAGGCGGCCATGTACGTGTGGCGGCGCAAGGCGA
CCGCGAGCCACGGCGTGGGCAGGTCGGCGCAGTGGAGCCGGGTGAAGGAGCTCGCCGCGGCCGCCGACGACGGCGGCGAG
GGCGGCAAGAACGTGGCGCTGGCCGGCAGGGCCGAGAGCCTCCTCCTCTGCATCAAGCACCGCTTCCCCGGCCTCTCCCA
GACCACCCTCGACACCAGCAAGATCCAGTTCAACAAGGTAGCCAATCAAATCAACAACCGCATCCCATATCTGCATCATC
TGAATTTGACACCAAGATACATACATTTATCTGAACTTGACATCATCATTTCTATCTGAACTTGACATGATCATCAGTTC
ATCACACACTTGA-TCTTGATGTAGATGAAATGCTGTTTTCTGATCGGGCGAGATGGATGATTTTCATTTTGCAGGATGT
TGGGCAGGCGATCCTGGAGAGCTACTCGAGGGTGCTGGAGAGCCTGGCGTTCAACATCGTCTCGTGGACGGACGAAGTTC
TTTTTGCCGACAAGGCTGCCAGGAAATGAACAGTGAGCGACGGACCAAACCTGACGGACAGATTCGTCGAGAGAATGAAC
GAATGAATGCTCT----TAAGAGCAAAATGTACTTACTTTCGAGCCTTGTTCCCAGCTCTCTGTGATGGGAAACGGCGTA
GATTAGGATGATGATGATCTTACGGTAACTTTTGTACCGTGAGATTTCTACTACTGACGTAGTCAAGGATTTGTAAGGTC
TATATATCTTGCAAAGAATATATGCAGAGTTTGTCTGACTAACAGTGA--GTCCTGTAAGATATTC-----TTTTTTGGC
TTTTTCATCTGATTT-CAGGTTGTGTCTGACCAG-----CAGTGTGTCTGATTTGCCCCTCTTTCTTGCTCATCGATCT-
-----------------------------------TGGTACCTATGGCTGTCAAAAAGCTTGTTATATATCCTTAGACGA
CCCAA-ACATCCAACCTAATAACACAAAGAATTAGTCAGGCACATTCATGACCATGCAACTTGACTCGCTGAAAACCTCC
GGTTTAGTAGAATTTACTGCGATAACATTAGA--AAGGTTGATGATCAAATGCACTGCGCTTCATACACACACACACAT-
---------------------------GTAGTTGACATCCACTTTGAGTAGCAGCAAATACAGGCAGCGCACATGT-TTA
TCCAAGGAAACAAAGCGTGGTCCAACTTAACTGAAAAGACACCGATATTTCGCAAAATGAAGACCATGCAGTAGCATTTG
ATCTGTCATATAGTATTATGGTAACTGTTACACATGTGTGATTCTCGAAAAACTATTACACATGTACACACAAACACAAA
-------AAGAAAAAAATATACATGTGTGATCACCTCTGATCACAATGTACAAGAGGAAAATCCGCAAAGCCTT-CAGAC
TGCTGTGCATTTTAGCTGTCCAAGAGGCATGGCTGTGACGGGCTGCCCAAACTTCATCTAGTCTAGACAAGCTGCACGGC
TGGGAGGTTTGCAGGTCGAAACTTCCGCTGTCATGC
>chr1B_3
--TTGCAAGGTTTTTTCGTTCACTTTTCTCGATCAATGTATTATCTGCGATATTTCTCTGTCATTTAAACATGTATTGTA
TGGTATAATGCTTAAAATGTGTAACTAGAAAGCATACTAAGCCAGCTTGGAGTGGAAATTCCTGTGT-------------
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-------------CATTTTCCCCTCTTCTTTTATCTGTCCAATATACAGAATATTATACTACATCACAAAGAGTGAGTGT
CATCAGGTTTTCGCCCCATGGCTGGTGGTCCGTTCCAGGATCATCATGCGGTGGGTTTCCTGATGATGCGCCAACTCGCT
CCCCCCCCTTTTCAGTCTCATTTCGCGCAAGGTTTGTCCGGTTTTGGGTTAGTTGGTAATTCGGATACTAAGAACTTGGA
TACAGACTGATATATTTCCGTTGATTGTAAAATTAATGGAAAGGGGTTGTGAGCCTGGTTGGAAAAAAAAACATCACAAA
GATTAGCAATGATCCAGCCCACCAATACCATGGTTGACTATCCCTTAATTTCAGACACGCAAACATAATCCTGCCCCGAT
TTCTTTAGACAGACACTTCCATCCCACGACCAATAAAATATAGAAAGAAATCGAGTCACTAATCTCTCCA-ATGGCATGA
CCACTTTCCATGACCAAGGAAAAAACATACCATCCGTTGCTCACATTGCCGCTTCTCCCCTCTGTGCTCTGCCATTGTTG
AGAAAGAGAAAAAGGGAAACCTGCCAGAGCAGAGAGAAAGCTGATAGAGGGAAACATTTGGAGAGAACACAAGAGCTTTT
CTTCTTCCAAAGCATTTGGCAAGGACAAGGAGATCATTGGCTTAGGGATCAAATCAGCGGCACAAAAGGTACTAATTTGC
TTCCCCTTCCCATTTGTTTCCTTTGATTTGCATCCAACAGCCAAGAAGAATTTGTGGTGGAATTGCAAAAAGGCGTGCTT
GTTTTCTTCCCATGCATCTAAAGAAGATTCAAAAGCAAAAGCATTTCATGGCTACTTTCTTGCGATCTGCATGGCATGCT
CAACTAGCCATGGATTGGTATGGAGTCACCTCGCCATCGTCTAAAAAGCAGCAAATCAAGATGTTAAAAACAAGAATGAA
TCGCTCAAATTTCGGGAAATGTGTTTAAATTTTGTATTAAGCGCACAGGAGTTCAAATTTTGTCCGGTGCTCCCATTTCG
ATGGATTTG---------TCGCGCCATTCGCGAGAATTCACCGGGACCCTTTCCTTATAAAGCAGGACTAGCTAACTGTA
CTGCACGAAGGGAGGAAGAAAGGAAGGAAGCC-------AATAACC-------ATGGCTGACAGCAGCAGCAGCCCGTCG
GTCTCATTGTCCGACGAGAGCTCCGAGGCAGAGGCGCAGTGCTGCTCGTCGTCGTCCACGGCGCCGAGCCTGCACGACAC
GGTGGACTTCAGCCGCACCGCCTCGGACGTGTCCACCTTCTCGGAGCGCAGCGTTGACCACAGCGGGCCCTTCGGGACGG
CCGCCGTGTCCAAGCTCATCGGCGGCCGCGGCTCCCCCGCCGCCGCGCTCAGCCGGCTCAGCATGAAGCCCCGCGCTGAC
GTGCTCGACCGCCGCTCCGCCGAGGACGAGCTGGACCTGGTCAAGGAGAGGTTCTCCAAGCTGCTGCTGGGCGAGGACAT
GTCCGGCGGCGGCAAGGGCGTGTGCACCGCTGTCGCCATCTCCAACGCCATCACCAACCTCTACGCGACGGTCTTCGGGA
ACTGCCACAAGCTGGAGCCGCTGCCGGCGGGGAAGAAGACCATGTGGAGGAGGGAGATGGACTGCCTCCTCGCCGTCTGC
GACTACATCGTCGAGTTCTACCCCTCCACGCAGCCGCTCTCCGACGGCACCCGCGTCGAGGTCATGGCCACCAGGCCAAG
ATCCGACATCTACATCAACCTCCCCGCCCTCGAGAAGCTCGACGCCATGCTCATCGTAAGTACAGTAGATGATCTTTCTT
CCGACGACGAGGTGATGATCTTTCATTGTTCCGAATTCTGATCAGTGCCAACAAAATGTGTCGTTGACATGTGCAGGAGA
TCATGGACAGCTTCCAGAAGGCGGAGTTCTGGTACGCGGACGCCGGGACGAGGTCGTTCGGGTCGGTGACCTCGTCGTCC
TCGCCGTCGTCGTCGTTCCGGCGGTCGACGACAACGACGACCCAGCGGAACGAGGAGAAGTGGTGGGTGCCGGTGCCGTG
CGTCCCGGAGGGCGGGCTGTCCGTGAAGGCGCGCAAGGAGCTCCGTCAGAGGCGCGACTGCGCGAACCAGATCCACAAGG
CGGCCGTGGCCATCAACAGCGGCGTGCTGAGCGACATGGAGGTGCCGGAGTCGTTCATGGCGCTGCTCCCGAAGAGCGGC
AAGGCGAGCGTCGGGGACGCGGTGTACCGCGCCATGCACAGCTCCGACAAGTTCTCGCCGGACTACCTGCTGGACTGCGT
GGACGTGTCGTCGGAGCACGAGGCGCTGGCGCTGGCCGACCGGGTGGAGGCGGCCATGTACGTGTGGCGGCGCAAGGCGA
CCGCGAGCCACGGCGTCGGCAGGTCGGCGCAGTGGAGCAGGGTCAAGGAGCTCGCCGCGGCCGCCGACGACGGCGGCGAG
GGCGGCAAGAACGTGGCCCTGGCCGGCAGGGCCGAGAGCCTCCTCCTCTGCATCAAGAACCGCTTCCCCGGCCTCTCCCA
GACCACCCTCGACACCAGCAAGATCCAGTTCAACAAGGTAGCCAATCAA-----CAACATCATCCCACATCCGCATCATC
TGAATTTGACACGA----ACATACATTTATCTGAACTTGACATGGCCATTTTTTG-------------------------
--------------------------------------------------------------------TGTGTAGGATGT
TGGGCAGGCGATCCTGGAGAGCTACTCGAGGGTGCTGGAGAGCCTGGCGTTCAACATCGTCTCGTGGACGGACGAGGTTC
TTTTTGCCGACAAGGCTGCCAGGAAATAAACAGTGAGCGACGAACCAAACCTGACGGACGGATTCGTCGAGAGAGTGAAT
GAATGAATGCTCTTA--TAAGAGCAAAATGTACTTACTTTCGAGCCTTGTTCCCAGCTCTCTGTGATGGGAAACGGCGTA
GGTTAGGATGATGAT---CTTACGGTAACTTTTGTACCGTGAGATTTCTACTACTGACGTAGTCAAGGATTTGTAAGGTC
TATATATCTTGCAAAGAAAATATGCAGAGTTTGCCTGACCAACTGTGA--GTCCTGTAAGATTTTTTATTTTTTTTTGAC
TTTTTCATCTGATTT-CAGGCGGTGTCTGACC-----AACAGTGTGTCTGATTTGCCCCTCTTTCTTGCTCATCGATCTT
GGTGAAGCTAAGGACCAAGTGAGATGCTTGCTGCTTGGTATCTATGACTGTCAAAAAGCTTGTTATATATCCTTAGACGA
CCCAA-ACATCCAACCTAATAACACAAAGAAT-AGTCAGGCACATTCATGACCATGCAACTTGACTCGCTGAAAACCTCA
AGTTTAGTTGAATTTACTGCGATAACATTAGA--AAGGTTGATGATCAAATGCACTGCACTTCACACACACACACACACA
CACACACACACGCACGCACGCACGCACGTAGTTGACACCCACTTTGAGTAACAGCAAATACAGATAGCGCACATTTCTTA
TCCAAAGAAACAATGCGTGGTCCAACTTAACTGAAAAGACAACGGTATTTCGCAAATTGAAGAACATGCAGTGGCATTTG
ATCTGTCATATAGTATTATGGTAACTGTTACACATGTGTGATTCTCGAAAAACTATTACACATGTACACACAAACACAAC
GAG--------AAAAAATATACATGTGTGATCACCTCTGATCACAATGTACAAGAGGAAAATCCGCAAAGCCTT-CAGAC
TGCTGTGCATTTTAGCTGTCCAAGAGGCATGGCTGTGACAGGCTGCCCAAACTTCATCTAGTCTAGACAAGCTGCACGGC
TGGGAGGTTTGCAGGTTGAAACTTCCGCTGTCATGC
>SNPs
SS----------------------------S-----------S-------------------------------------
---S-------------------------------S--------------------------------------------
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----------------------------------S---------------------------------------------
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---------------------------------------------------------S----------------------
-----------------------------------S----S-------------------------S-----------S-
-----------------S------------------S----------------------S--------------------
----S------------------------S--------------------------------------------------
------------------------------------S---------------------------S-S-----S-------
--------------------------------------------------S-----------------------------
--S-SSSSSSS-----------------------------------------------------S---------------
-----------------------------------S----------------------S------S--------------
---------SSSSSSSSS------------------------------------------------SS---SSS------
-------------S----S-------------------S--SS-S-SSSSSSS-----S--S-------S----------
SS----S-------------------------------------------------------------------------
---------------------------------------------S----------------------------------
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---------------------S----------------------------------------------------------
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-------------------------------S---------S----------S---------------------------
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---------------------------------------S----S-----------------------------------
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--------------------------------------------------------------------S-----------
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-S-----------------S------------------------------------------------------------
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--------------------------------S-----------------------------------------------
-------------S--------S-----S----------------S---S----------S-S--SS-------------
------------------------------------------------------------S-------------------
---------------------------------------------------------------------------S----
---S---S-------SS---------------------------------------------------------------
--------------------S----------------------------------------------------S-----S
-----------------S-----------------------------SSS------------------------------
---------------S---------S-------SSSS----------S--S---S-------------------------
---S---S-------------S------------S-----S---S--S---------S-------------SSSSSSS-S
S-SSSS---------S---S----S---S--S--S---SSSS-----------S-SS-SSSSSSS-S-SSS---------
----------------------S--S-SS-SSSS--S----S-------------------------------SSSSS-S
S-S-SSSSS-SS--SSSSSS-------------------S-----S-S-------------------S--S---------
-------------S-S--S---S---------S-S--S----S---------S---------------S-----------
--------------------------------------------------------------------------------
--SSSSS--S----S-----------------------------------------------------------S-----
-----------------------------------------SSS------------------------------------
------------------------------------
>forward_1455
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---------------------------------------------------------------------------TTTCG
ATGGATTTGTCGCGC-----------------------------------------------------------------
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>reverse_3356
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---------------------------------------------------------------------------CGAAC
GAACGAACGCTCTTAC----------------------------------------------------------------
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