>input_sequence_45008
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----------------------------------------------------------------------------ATGG
CAAGCTTCAACCATGCCAACGACACCGCCCGGGACACCG------------GCTCTCCCCCGGCTGCGGCTGCTACGTCT
ACCCTCGGAGTTGGGCCCCTTCCTCTAGACGCCGGCGAGTTCCGGCGTCAGGGACGTCAAGTCATGGACTTCATCGCGGA
CTACTACGACCGCATCGACGAGTACCCTGTTCGCCCGGCCGTCGCTCCCGGGTTCCTAGCCCGGCAGCTTCCCGACACGG
CGCCGTCGTGGCCGGAGCCCGACGCGCTCGCCTCGGCGCTGCGCGACATCCGGGACCTCATCCTTCCCGGCGTCACCCAC
TGGCAGAGCCCCCGTCATTTCGCGCACTTCGCGGCGACGGCGAGCAACGTGGGCGCGCTCGGCGAGGCCCTCGCCGCGGG
CCTCAACATCAACCCTTTTACCTGGGCCGCCTCGCCGGCGGCCACCGAGCTCGAGGTCGTTGTTACAGATTGGCTGGGTA
AGGCGCTACACCTCCCGGAGCAGCTGCTCTTCTGCGGTGGCGGCGGCGGCACGCTGCTCGGGACGTCGTGCGAGGCCATG
CTCTGCACCATCGTCGCCGCGAGGGACCGGAAGCTCGCCGAAGTAGGAGGCGAGGAGAGGATGGGCGACCTCGTCGTCTA
CTGCTCCGACCAGACCCACTTCTCGTTCAAGAAGGCCGCGCACGTCGCCGGCATTCGCCGGGCGAACTGCCGGGTGATAC
CGACGTGCCGCGAGAGCGGCTTCACGCTGTCGCCGGCGGCACTGCAGGCCGCCGTGCGCGCCGACGAGGCAGCTGGGAGG
GTCCCTCTCTTCCTGTGCGCGACTGTGGGGACCACTCCGACGGCGGCGGTCGACCCTCTCCGCGAGCTGTGCGCCGCGGT
GGCGGGCCACGGCGTGTGGGTGCACGTGGACGCAGCCTACGCCGGCGCAGCGTGCATTTGCCCGGAGTTCAGCCACATCA
CCGCGGGCGCCGCGGCCGTGGACTCGTTCAGCACGAACCCGCACAAGTGGCTCCTGTCCAACATGGACTGCTGCGCGCTG
TGGGTGCGGCATCCCACGGCGCTCGTGGCGTCGCTCGGCACCGACGACGACGTGATCCTCAAGGACGCAGCTGCATCGGG
------CGTCGTGGACTACAAGGACTGGCAGGTGGTGCTGAGCCGCCGGTTCCGCGCGCTGAAGCTGTGGCTCGTGCTCC
GCTGCCACGGCGTGGAGGGCCTCCGCGGCTTCGTGCGCGCCCACGTGCGCATGGCCGCGGCCTTCGAAGCCATGGTGCGC
GCCGACCCGCGGTTCGAGGTGCCCGTGCCGGCGCGGTTCGGGCTCGTGTGCTTCCGCCTCCGCCCCGT------------
CGACGACGGCATGGCCGAGACCACGACGAACGAGCTCAACCGGAGGCTGCTGGAGGCGGTGAACGCGACGGGGCGCGCGT
ACATGAGCTGCGCGGTGGTGGGTGGCATGTACGTGCTGCGGTGCGCCATCGGGAACTCGCTGACGGAGGAGCGGCACGTC
CGGGAGGCGTGGAGCGTCGTGCAGGAGCAAGCCGACGCGGTGCTTGCCCCGGCGGGCGCCGGCGTCGCTCCGGCTGCTCG
TTCGAAGGGGCGTACGGTTGAGGATGCCCGTCGCATGGAGACCGGCGTGCATGAGAAATGGCGCTCACCGCCGCGCACTG
CGTACCGCGTGATTCGTTCTTACGCGTTGGCTTTCCTCTTGGGTAAATAA------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>chr1B_1_TraesCS1B01G343000
AAGACCTCGGTTGCAAAAAGATGGCAACAAAACTCAATTGCGAAAAAATGCAACAAAATAATTCTTGCAAAATAATCCTG
CAACAAGACCTATGTTGCATAAATAATTTTGCAACAAGACATGTGTTGCAACGGTGATGCACGCTCGGTCGCTTGATGTG
GCAAATCAGACGACTCGTGACCCGGCTGATCTTTTAAAAAGATCAACCGGCGGACGCGTAGCACGCCCCCAAAAAAAAAC
AGAATTTCTTTAATTTTCTTTGATTTTACTGTTCATCCGAGCTAATTTAAGCTCGAGCTCATAAGGGCACTTTTCCTATC
AACTCCTCTTTAATAATAAATAGGATCCTGAGTATAGTACTATGTACTAGTATTTGAGATTATTAAGGTGTAGGTGCAGC
AAAGTTCTTGAAAAATAGGACCCTGATAAATGTCACACGTGTGACATGATCACATGGCGGCAACTTTGAACGTTTTTTAT
GGTATAAATTTAGTCATGCGAGGATGGCAGGTTTAGTTGTTAAGCATGATAGCTTTCTTTTCAAATGTCAAGCTTTGGTT
TACTTTATCAGTTTTGCTAGAACTCATCTAGATGAGATATAATTTGGTCTCATTCACCTTTTATAGTCATTGGAGTGATG
CTATAAGATGCGTGTGTGCTGACGTGGATTCTATCTGTTCTTGTTTTCAAAGTGAATGAGACCAAATTATATCTCATCTA
GATGAGTTCTAGGTACTCTCTTACTTTATTCTTTTTGAATGACAACTTGAGTTTAAAAAAGTCA--GGCCCGAGTGCTGG
GTGTTACACGTGTGGCAATGTGGCATTTATGATTTTAG-AAAAAATATGATGTGGCAG------------GAA--AAAAA
ATGCATGCAGCG-ATGCACGCCGGCCTTTAAATGAGCCACACTCCACGCCTTCTT------CACTCACTGCAGACTTGCA
GAGTCACAGGCTCATAACCCAGTGTTGGCACTCCACTCGATCAAG--CT--AGC--------TCCTGCCCCCTGCCATGG
CAAGCTTCAACCATGCCAACGACACCGCCCGGGACACCG------------GCTCTCCCCCGGCTGCGGCTGCTACGTCT
ACCCTCGGAGTTGGGCCCCTTCCTCTAGACGCCGGCGAGTTCCGGCGTCAGGGACGTCAAGTCATGGACTTCATCGCGGA
CTACTACGACCGCATCGACGAGTACCCTGTTCGCCCGGCCGTCGCTCCCGGGTTCCTAGCCCGGCAGCTTCCCGACACGG
CGCCGTCGTGGCCGGAGCCCGACGCGCTCGCCTCGGCGCTGCGCGACATCCGGGACCTCATCCTTCCCGGCGTCACCCAC
TGGCAGAGCCCCCGTCATTTCGCGCACTTCGCGGCGACGGCGAGCAACGTGGGCGCGCTCGGCGAGGCCCTCGCCGCGGG
CCTCAACATCAACCCTTTTACCTGGGCCGCCTCGCCGGCGGCCACCGAGCTCGAGGTCGTTGTTACAGATTGGCTGGGTA
AGGCGCTACACCTCCCGGAGCAGCTGCTCTTCTGCGGTGGCGGCGGCGGCACGCTGCTCGGGACGTCGTGCGAGGCCATG
CTCTGCACCATCGTCGCCGCGAGGGACCGGAAGCTCGCCGAAGTAGGAGGCGAGGAGAGGATGGGCGACCTCGTCGTCTA
CTGCTCCGACCAGACCCACTTCTCGTTCAAGAAGGCCGCGCACGTCGCCGGCATTCGCCGGGCGAACTGCCGGGTGATAC
CGACGTGCCGCGAGAGCGGCTTCACGCTGTCGCCGGCGGCACTGCAGGCCGCCGTGCGCGCCGACGAGGCAGCTGGGAGG
GTCCCTCTCTTCCTGTGCGCGACTGTGGGGACCACTCCGACGGCGGCGGTCGACCCTCTCCGCGAGCTGTGCGCCGCGGT
GGCGGGCCACGGCGTGTGGGTGCACGTGGACGCAGCCTACGCCGGCGCAGCGTGCATTTGCCCGGAGTTCAGCCACATCA
CCGCGGGCGCCGCGGCCGTGGACTCGTTCAGCACGAACCCGCACAAGTGGCTCCTGTCCAACATGGACTGCTGCGCGCTG
TGGGTGCGGCATCCCACGGCGCTCGTGGCGTCGCTCGGCACCGACGACGACGTGATCCTCAAGGACGCAGCTGCATCGGG
------CGTCGTGGACTACAAGGACTGGCAGGTGGTGCTGAGCCGCCGGTTCCGCGCGCTGAAGCTGTGGCTCGTGCTCC
GCTGCCACGGCGTGGAGGGCCTCCGCGGCTTCGTGCGCGCCCACGTGCGCATGGCCGCGGCCTTCGAAGCCATGGTGCGC
GCCGACCCGCGGTTCGAGGTGCCCGTGCCGGCGCGGTTCGGGCTCGTGTGCTTCCGCCTCCGCCCCGT------------
CGACGACGGCATGGCCGAGACCACGACGAACGAGCTCAACCGGAGGCTGCTGGAGGCGGTGAACGCGACGGGGCGCGCGT
ACATGAGCTGCGCGGTGGTGGGTGGCATGTACGTGCTGCGGTGCGCCATCGGGAACTCGCTGACGGAGGAGCGGCACGTC
CGGGAGGCGTGGAGCGTCGTGCAGGAGCAAGCCGACGCGGTGCTTGCCCCGGCGGGCGCCGGCGTCGCTCCGGCTGCTCG
TTCGAAGGGGCGTACGGTTGAGGATGCCCGTCGCATGGAGACCGGCGTGCATGAGAAATGGCGCTCACCGCCGCGCACTG
CGTACCGCGTGATTCGTTCTTACGCGTTGGCTTTCCTCTTGGGTAAATAAAAGGAACTGGTGAGATTAGGGTGTACCTGT
CCTGTCCATGGATTAAATATTGGATTTGTATACTTTCGAAAATAAGTAAATACTATTGGATTTGGATGTGAAGGTGTATC
AATGGCTTGGAGAGACGTCACAACACAAAAGCATTTCTAAGTGAAGCAGACATGGATCAATCATGTGTTTTTCACTAGTA
TTTGTTTTGCAGCATTTTCATAAGTTTTTTTCCTG---ATGTGGTGTTCATCTATTGCTCAGCTTTTCTCTATCATTTCC
AGACAACTTCACTTGCTGAATTACAATTTATTTGGGATGG---ATTTTAAACAATGTCACTTTCTATTTAGTCTGGAAAT
TTCAAAATATAAATATTTATTATAATATTTT-CCTTAGATAGT----TTTTTTCACAAATCTTTA-TTTCAATGACATTT
CGAAAAAGTTAAAAGAAGATTCTAAAGTAACAATATTTTAGTCATATTTC------------ATTGATTATTTCATATTC
AAAATATTCACATTCCCATCTACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTCGTCTAGATACGGATGTATCTAATAC
TAAAACGTGACTTGATACATCCGTATTTAGACAAATGTAAGACAAGAATTTTGAGACGGAGGGAGTATTATTTTAGTCAT
GTTACAATAATTTCAGATACATTCCAGAGATCTAACATGTATCATATATATTTCTCAATGTCCAGTCATAAATGAATGTA
CCGTCAGGAGACATGAACATGATTTGCTGGAACTGCCAGCATTGTCGGAGCTATGTGTATCAAAAATAGGCCACGGCTCG
CCCAACCAGTAGCAAATGCAGTGGAGGATTCAGAATAGATTGAGTTGTGAAAGAAAAATTAGTGGATTTTCTTTGTACTG
GCCCGCCCACCATTGATAGTGTAGCTCCGCCATTGACTGCCAGGTTTGTGTTGACCTCATACAGTTCAAGAGCTTGTGTG
CCTTACAAATACACACCAAACCAACGTTATTTTT
>chr1A_252
AATTTTTCTGATT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTTTACTGTTCATCTGAACTAATTTGAGCTCGAACTCAGAAGGGTACTTTCCCTATC
AACTCCTCACTAATAATAA-TAGGATCCTGAGTATAGTACTATGTACTAGTATATGAGATTATTAAGATGTAGGGGTAGC
AAAGTCCTTAAAAACTAGGATCCTCACAATTGTCACACGTGTGGCATGAACACATGGC---AAC----AACGTTTTTTAT
GATATAAATTTAGTGACGTGGAGATGACAAGTTTAGTTGTTGAGCATGATAACTTTTTTTTCGGATGGCAAGTTTTGATT
TATTTTTTC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTTTGAACGATAATTTTAGTTTAAAAAACGTCATGGCCCGAGTGCTGC
GTGTCACACATGTGGT--------ACTTATTATTTTAGAAAAAAATATAATGTGACACTTATCATCAGAAGAA--AAAAA
ATGCATGCAGCG-ATGCACGCCGGCCTTTAAATGAGCCACACTCCACGCCTTCTT------C--------------TGCA
GAGTCACAGGCTCATAACCCAGTGTAGGCACTCCAGTCGATCAAGTTCT--AGC--------TCTTGCCCCCTGCCATGG
CAAGCTTCAACCACGCCAAC------------GACACCG------------GCTCACCCCCGGCTGCGGCTGCTACGCCT
ACGCTCGGAGTTGGACCCCTTCCGCTAGACGCCGGCGAGTTCCGTCGTCAGGGACGTCAAGTTGTGGACTTCATCGCGGA
CTACTACGACCGCATTGACGAGTACCCTGTTCGCCCGACCGTCGCTCCCGGGTTCCTAGCCCGGCAGCTTCCCGACACGG
CGCCGTCGTGGCCGGAGCCCGACGCGCTCGCCTCGGCGCTGCGCGACGTCCGCGAGCTCATCCTTCCCGGCGTCACCCAC
TGGCAGAGCCCCCGTCATTTCGCGCACTTCGCGGCGACGGCCAGCAATGTGGGCGCGCTCGGCGAGGCCCTAGCCGCGGG
CCTCAACATCAACCCTTTCACCTGGGCCGCCTCGCCGGCGGCCACCGAGCTAGAGACCGTTGTTACAGATTGGCTCGGGA
AGGCGCTGCACCTCCCGGAGCAGCTGCTCTTCTGCGGTGGCGGCGGCGGCACGCTGCTGGGGACTTCGTGCGAGGCCATG
CTCTGCACCATCGTCGCCGCGAGGGACCGGAAGCTCGCCGAACTAAGAGGCGACGAGAGGATGGGCGACCTCGTCGTCTA
CTGCTCCGACCAGACCCACTTCTCGTTCAAGAAGGCCGCGCACGTCGCCGGCATTCGCCGGGCGAACTGCCGGGTGATAC
CGACGTGCCGCGAGAGCGGCTTCACGCTGTCGCCGGCGGCACTGCAGGCCGCCGTCTGCGCCGACGAGGCGGCGGGGAGG
GTCCCTCTCTTCCTGTGCGCGACTGTGGGGACCACTCCGACGGCGGCGGTCGACCCTCTCCGGGAGCTGTGCGCCGCAGT
GGCGGGGCACGGCGTGTGGGTGCACGTGGACGCGGCCTACGCCGGCGCCGCGTGCATTTGCCCGGAGTTCAGCCACATCG
CCGCCGGCGCCGAGGCCGTGGACTCGTTCAGCACGAACCCGCACAAGTGGCTCCTGGCGAACATGGACTGCTGCGCGCTG
TGGGTGCGGCATCCCACGGCGCTCGTGGCGGCGCTCGGCACCGACGATGACGTGATCCTCAAGGACGCGGCGGCATCCGC
------CGTCGTGGACTACAAGGACTGGCAGGTGGCGCTGAGCCGCCGGTTCCGCGCGCTGAAGCTGTGGCTCGTGCTCC
GCTGCCACGGCGTGGAGGGCCTCCGCGGCTTCGTGCGCGCCCACGTGCGCATGGCCGCGGCCTTCGAGGCCATGGTGCGC
GCTGACCCGCGGTTCGAGGTGCCCGTGCCGGCGCGGTTCGGACTCGTCTGCTTCCGCCTCCGCCCCGCCACCGACGCCGC
CGATGACGGCACGGCCGAGGCCACGACGAACGAGCTCAACCGGAGGCTGCTGGAGGCGGTGAACGCGACGGGGCGCGCGT
ACATGAGCTGCGCGGTGGTGGGCGGCATGTACGTGCTGCGGTGCGCCATCGGGAACTCGCTGACGGAGGAGCGGCACGTC
CGGGAGGCGTGGAGCATCGTGCAGGAGCAAGCCGACGCGGTGCTGACCCCGGCGGGCGCCGGCGTCGCTCCGGCTGCTCG
TTCGAAGGGGCGTACGGTTGAGGATGCCCGTCGCATGGAGACCAGCGTGCATGAGAAATGGAGCTCACCGCCGCGCACTG
CGTACCACGTGATTCGTTCCTACGCGTTGGCTTTCGTACCACGCGTTGGCGTTCC---------------GCGCAT-CTT
CCTGTCCATGGACT-AATATTGGATTTGGATACTTTCAAAAATAAATAAA---TATTGGATTTGGATGTGAAGGTGTATC
AATGGCTTGGAGA--CGTCACAACACAAAATCATTTATAACTGAAGCAGACATGGATCAATCATGTGTTTT-CACAAGTA
TATTTTTTGCAGCATTTTCATAAGTTTTTTTT--CCTAATGTGGTGTTTCTGTATTGCTCAGCTTTTCTCTATCATTCCC
AGACAACTTCATTTGCTGAATTACAAATTAGCATTTGGGATGAATTTTAAACAATGTCACTTTCTATTTAATCTGGAAAT
TTCA------AAATATTTATTATTATATTTTTTCTTAGATGGTTTTATTTTTTCACAAATCTTTGTTTTCAATGAAATTT
CAAAAAAGTTAACAGAAGACTCAAAAGTAACAATATTTTAGCCATATTTCATTGATTAAAAAATTGATTATTTCATATTC
AAAATATTCACATTCCCATCTA----------------------------------------------------------
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----------------------------------
>chr1D_264
--------------------------------------------------------------------------------
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-----------------------TTTTACTGTTCATCCGGACTAATTTGAGCTTGAACTCAGAAGGGTACTTTCCCTATC
AACTCCTCATTAATAATAA-TAGGATCCTGAGTATAGTACTATGTACTAGTATATGAGATTATTAAAATGTAGGTGTAGC
AAAGTCCTTGAAAAATAAGATCCTGATAAGTGGCACACGTGTGACATGAACGCATGGC---AACTTTGAAAGTTTTTGAT
CGTATAAGTTTAGTGACGTGAGGATGGCAAGTTTAGTTGTTAAGCATGATAACTTTTTTTTCAAATGGCAAGTTTTGGTT
TATTTTTTC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTTTGAACGACAATTTTAGTTTAAAAAACGTCATGGCCCGAGTGCTGC
GTGTGACACGTGTGGT--------ATTTATTATTTTAG-AAAAAATATGATGTGACACTTATCATCAGAAGAAAGAAAAA
ATGCATGCAGCGTATGCACGCCTGCCTTTAAATGAGCCACACTCCACGCCTTCTT------C--------------TGCA
GAGTCACAGGCTCATAACCCAGTGTAGGCACTCCACTCGATCAAG--CTCTAGC--------TCCTGCCCCCTGCCATGG
CAAGCTTCAACCACGCCAAC------------TACACCGCCCGGGACACCGGTTCTTCCCCGGCTGCGGCTGCTACGCCT
ACGCTCGGAGTTGGACCCCTTCCGCTAGACGGCCGCGAGTTCCGGCGTCAGGGACGTCAAGTTATCGACTTCATCGCAGA
CTACTACGACCACATTGACGAGTACCCCGTCCGCCCGGCCGTCGCTCCCGGGTTCCTAGCCCGGCAGCTTCCCGACACCG
CGCCGTCGTGGCCGGAGCCCGACGCGCTCGCCTCGGCGCTGCGCGACGTCCGGGACCTCATCCTTCCCGGCGTCACCCAC
TGGCAGAGCCCCCGTCATTTCGCGCACTTCGCGGCGACGGCCAGCAACGTGGGCGCGCTCGGCGAGGCCCTCGCCGCGGG
CCTCAACATCAACCCTTTCACCTGGGCCGCCTCGCCGGCGGCCACCGAGCTCGAGACCGTTGTTACAGATTGGCTGGGTA
AGGCGCTACACCTCCCGGAGCAGCTGCTCTTCTGCGGTGGCGGAGGCGGCACGCTGCTGGGGACGTCGTGCGAGGCCATG
CTCTGCACCATCGTCGCCGCGAGGGACCGGAAGCTCGCGGAAGTTGGAGGCGAGGAGAGGATGGGCGACCTCGTCGTCTA
CTGCTCCGACCAGACCCACTTCTCGTTCAAGAAGGCCGCGCACGTCGCCGGCATTCGCCGGGCGAACTGCCGGGTGATAC
CGACGTGCCGCGAGAGCGGCTTCACGCTGTCGCCGGCGGCACTGCAGGCCGCCGTGCGCGCCGACGAGGCAGCTGGGAGA
GTCCCTCTCTTCCTGTGCGCGACTGTGGGGACCACTCCGACGGCGGCGGTCGACCCTCTCCGCGAGCTGTGCGCCGCAGT
GGCGGGGCACGGCGTGTGGGTGCACGTGGACGCGGCCTACGCCGGCGCAGCGTGCATTTGCCCGGAGTTCAGCCACATCG
CCGCGGGCGCTGAGGCCGTGGACTCGTTCAGCACGAACCCGCACAAGTGGCTCCTGGCCAACATGGACTGCTGCGCGCTG
TGGGTGCGGCGTCCCGCGGCGCTCGTGGCGGCGCTCGGCACCGACGATGACGTGATCCTCAAGGACGCGGCGGCTTCCGC
------CGTCGTGGACTACAAGGACTGGCAGGTGGCGCTGAGCCGCCGGTTCCACGCGCTGAAGCTGTGGCTCGTGCTCC
GCTGCCACGGCGTGGAGGGCCTCCGTGGCTTCGTGCGCGCCCACGTGCGCATGGCCGTGGCCTTCGAGGCCATGGTGCGC
GCCGACCCGCGGTTCGAGGTGCCCGTGCCGGCGCGGTTCGGACTCGTGTGCTTCCGCCTCCTCC------------CCGC
CGACGACGGCACGGCCGAGGCCACGACGAACGAGCTCAACAGGAGGCTGCTGGAGGCGGTAAACGAGACGGGGCGCGCGT
ACATGAGCTGCGCGGTGGTGGGCGGCATGTACGTGCTGCGGTGCGCCATCGGGAACTCGCTGACAGAGGAGCGGCACGTC
CGGGAGGCGTGGAGCGTCGTGCAGGAGCAAGCCGACTCGGTGCTGACCCCGGCGGGCGCCGGCGTCGCTCCGGCTGCTCG
TTCGAAGGGGCGTACGATTGAGGATGCCCGTCGCATGGAGACCAGCGTGCACGAGAAATGGCGCTCACCGCCGCGCACTG
CGTACCACGTGATTCGTTCTTACGCGTTGGCTTTCCTCTTGGGAAAATAAGAGGAACCGGTGAGATTAGGGTGTAT-TGT
TCTATCCATGGATTAA-------------------------------------TATTGGATTTGGATGTGAAGGTGTATC
AATGGCCTGGAGA----------------ATCATTTCTAAGTGAAGCAGACATGGATCAATCATGTGTTTTTCAATAGTA
T-TTTTTTGCAGCATTTTCATAAGTTTTTTTTTTCCTATTGTGGTGTTCATATATTGATCAGCTTTTCTCTATCATTTCC
AGACAACTTCATTTGCTGAATTACAATTT---ATTTGGGATGAATTTTAAACAATGTCACTTTCTATTTTGTCTGGAAAT
TTCG------AAATATTTATTATAATATTTTTCCTTAGATAGTTTTATTTTTCTCAAT-TCTTTATTTTCAATGAAATTT
CAAAAGAGCTAAAAGAAGATTCAGAAGTAACAATATTTTAGCCATATTTCATTGATTA----------------------
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----------------------------------
>chr1D_859
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------AAAAT
ATGCATGCAGCA-ATGCACGCTGGCCTTTAAATGAGCCACACTCCACGCCTTCTTCACTCAC--------------TGCA
GAGTCATAGGCTCATAACCCAGTGTAGGCACTCCATTCGATCAAG--CTCTAGCTCCTGCAGTCCTGCCCCCTGCCATGG
CAAGCTTCAACCACGCCAAC------------GACACCGCCCGGGACACCGGCTCTCCCCCGGCTGCGGCTGCTACGCCT
ACGCTCAGAGTTGGACCCCTTCCGCTAGACGCCGGCGAGTTCCGGCGTCAGGGACGTCAAGTTGTGGACTTCATCGTGGA
CCACTACGACCGCATTAACAAGTACCCCGTCCGCCCGGCCGTTGCTCCCGGGTTCCTAGCCCGGCAGCTTCCCGACACCG
CGCCGTCGTGGCTGGAGCCCAACACGCTCGCCTCAGCGCTGCGCGATGTCCAGGACCTCAACCTTCCCGGCGTCACCCAC
TGGCAGAGCCCCCGTCATTTCGCGCACTTCGCGGCGATGGCCAGCAACGTGGGCGCGCTCAGCGAGGCCCTCGCCGCGGG
CCTCAACATCAACCCTTTCACCTGGGTCGCCTCGCCGGCGGCCACCGAGCTTGAGACCGTTGTTACAGATTGGCTGGGTA
AGGCGCTACACCTCCCGGAGGAGCTGCTCTTCTGTGGTGGCGGAGGCGGCACGCTGCTGGGGACGTCGTGCGA-------
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----------------------------------
>chrUn_1094
CCTGCTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------GACGCTGACGAGTTCCGGCGTCAGAGTCACCAGGTAGTTGACTTGATCACCGA
GTACTATGACCGCATGGGCGACTACCCCGTGCACCCCAGCGTTACCCCTGGTTTCCTCCGCAACTTGCTCCCCCCGGACG
CACCCTTCCGTCCGGAGCCGGACGCGTTCAGCTCCGCGCTCAAGGACGTCCGCGACATCATCCTCCCGGGCCTGACGCAC
TGGCAGAGCGCCCGCCACATGGCGCACTTCCCGGCGTCAAGCAGCACCATCGGCGCCCTAGGGGAGGCGCTCACCGCGGG
CATCAACGTCGTCCCGTTCACATGGGCCGCCTCACCGGCCGCCACCGAGCTTGAAATGCTGGTCGTGGACTGGCTCGGAA
AGGCGCTGCACCTGCCGGAGAGTCTCCTCTTCGCCGGTGGTGGCGGTGGAACTCTTCTTGGTACCTCTTGTGAGGCGATA
CTCTGCACTCTTGTGGCCGCGAGGGACCGGAAGCTCGCCGAGATCGGCGGGAAC---AGGATCTGCGACCTCGTCGTCTA
CTGCTCCGACCAGACACACTTCGCCTTCCGCAAGGCCGCACGCATTGCCGGCATCCTGCGTGACCACTGCCGCGCCATAC
CCACGTGCCACCACAACATGTTCGCTCTCCCGCCCACGGAACTGCAAGCGGCCATGCAGGCTGACGTGGAAGCCGGGCTG
GTGCCACTTTTCTTGTGCGCGACGCTGGGGACGACCCAGACGACTGCCGTCGACCCCATCGGCGAGCTGTGCGCTGTCAG
TGCACCACACGGCGTGTGGGTGCACGTGGACGCCGCCTACGGCGGCTCCGCGCTAGTCTGCCCGGAGTTCACCCACGTGA
TCGACGGCGTGGAGGCCGTCGACTCGTTCAGCATGAACGCCCACAAGTGGCTCCTCGCCAACAACGACTGCTGCGCCATG
TGGGTGAAGAAGCCGAGGGTGCTGGTGGCGGCGCTCGGGCCGGAGCAGGATTTGATCCTCAAGGACGCGGCATCGGAGGG
GCACAACGTGGTCGACTACATGGACTGGACCATAACGCTGACCCGCCGGTTCCGCGCGCTCAAGATGTGGCTCGTGCTCC
GCTGCTACGGCATCCAAGGCCTGCGCAACCACATCCGCAATCACGTCCGCATGGCCGAGGCATTCGA-------------
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----------------------------------
>chrUn_1094
CCTGCTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------GACGCTGACGAGTTCCGGCGTCAGAGTCACCAGGTAGTTGACTTGATCACCGA
GTACTATGACCGCATGGGCGACTACCCCGTGCACCCCAGCGTTACCCCTGGTTTCCTCCGCAACTTGCTCCCCCCGGACG
CACCCTTCCGTCCGGAGCCGGACGCGTTCAGCTCCGCGCTCAAGGACGTCCGCGACATCATCCTCCCGGGCCTGACGCAC
TGGCAGAGCGCCCGCCACATGGCGCACTTCCCGGCGTCAAGCAGCACCATCGGCGCCCTAGGGGAGGCGCTCACCGCGGG
CATCAACGTCGTCCCGTTCACATGGGCCGCCTCACCGGCCGCCACCGAGCTTGAAATGCTGGTCGTGGACTGGCTCGGAA
AGGCGCTGCACCTGCCGGAGAGTCTCCTCTTCGCCGGTGGTGGCGGTGGAACTCTTCTTGGTACCTCTTGTGAGGCGATA
CTCTGCACTCTTGTGGCCGCGAGGGACCGGAAGCTCGCCGAGATCGGCGGGAAC---AGGATCTGCGACCTCGTCGTCTA
CTGCTCCGACCAGACACACTTCGCCTTCCGCAAGGCCGCACGCATTGCCGGCATCCTGCGTGACCACTGCCGCGCCATAC
CCACGTGCCACCACAACATGTTCGCTCTCCCGCCCACGGAACTGCAAGCGGCCATGCAGGCTGACGTGGAAGCCGGGCTG
GTGCCACTTTTCTTGTGCGCGACGCTGGGGACGACCCAGACGACTGCCGTCGACCCCATCGGCGAGCTGTGCGCTGTCAG
TGCACCACACGGCGTGTGGGTGCACGTGGACGCCGCCTACGGCGGCTCCGCGCTAGTCTGCCCGGAGTTCACCCACGTGA
TCGACGGCGTGGAGGCCGTCGACTCGTTCAGCATGAACGCCCACAAGTGGCTCCTCGCCAACAACGACTGCTGCGCCATG
TGGGTGAAGAAGCCGAGGGTGCTGGTGGCGGCGCTCGGGCCGGAGCAGGATTTGATCCTCAAGGACGCGGCATCGGAGGG
GCACAACGTGGTCGACTACATGGACTGGACCATAACGCTGACCCGCCGGTTCCGCGCGCTCAAGATGTGGCTCGTGCTCC
GCTGCTACGGCATCCAAGGCCTGCGCAACCACATCCGCAATCACGTCCGCATGGCCGAGGCATTCGA-------------
--------------------------------------------------------------------------------
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----------------------------------
>chrUn_1094
CCTGCTT-------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------GACGCTGACGAGTTCCGGCGTCAGAGTCACCAGGTAGTTGACTTGATCACCGA
GTACTATGACCGCATGGGCGACTACCCCGTGCACCCCAGCGTTACCCCTGGTTTCCTCCGCAACTTGCTCCCCCCGGACG
CACCCTTCCGTCCGGAGCCGGACGCGTTCAGCTCCGCGCTCAAGGACGTCCGCGACATCATCCTCCCGGGCCTGACGCAC
TGGCAGAGCGCCCGCCACATGGCGCACTTCCCGGCGTCAAGCAGCACCATCGGCGCCCTAGGGGAGGCGCTCACCGCGGG
CATCAACGTCGTCCCGTTCACATGGGCCGCCTCACCGGCCGCCACCGAGCTTGAAATGCTGGTCGTGGACTGGCTCGGAA
AGGCGCTGCACCTGCCGGAGAGTCTCCTCTTCGCCGGTGGTGGCGGTGGAACTCTTCTTGGTACCTCTTGTGAGGCGATA
CTCTGCACTCTTGTGGCCGCGAGGGACCGGAAGCTCGCCGAGATCGGCGGGAAC---AGGATCTGCGACCTCGTCGTCTA
CTGCTCCGACCAGACACACTTCGCCTTCCGCAAGGCCGCACGCATTGCCGGCATCCTGCGTGACCACTGCCGCGCCATAC
CCACGTGCCACCACAACATGTTCGCTCTCCCGCCCACGGAACTGCAAGCGGCCATGCAGGCTGACGTGGAAGCCGGGCTG
GTGCCACTTTTCTTGTGCGCGACGCTGGGGACGACCCAGACGACTGCCGTCGACCCCATCGGCGAGCTGTGCGCTGTCAG
TGCACCACACGGCGTGTGGGTGCACGTGGACGCCGCCTACGGCGGCTCCGCGCTAGTCTGCCCGGAGTTCACCCACGTGA
TCGACGGCGTGGAGGCCGTCGACTCGTTCAGCATGAACGCCCACAAGTGGCTCCTCGCCAACA-----------------
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----------------------------------
>chrUn_1094
CCTGCTT-------------------------------------------------------------------------
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---------------------------GACGCTGACGAGTTCCGGCGTCAGAGTCACCAGGTAGTTGACTTGATCACCGA
GTACTATGACCGCATGGGCGACTACCCCGTGCACCCCAGCGTTACCCCTGGTTTCCTCCGCAACTTGCTCCCCCCGGACG
CACCCTTCCGTCCGGAGCCGGACGCGTTCAGCTCCGCGCTCAAGGACGTCCGCGACATCATCCTCCCGGGCCTGACGCAC
TGGCAGAGCGCCCGCCACATGGCGCACTTCCCGGCGTCAAGCAGCACCATCGGCGCCCTAGGGGAGGCGCTCACCGCGGG
CATCAACGTCGTCCCGTTCACATGGGCCGCCTCACCGGCCGCCACCGAGCTTGAAATGCTGGTCGTGGACTGGCTCGGAA
AGGCGCTGCACCTGCCGGAGAGTCTCCTCTTCGCCGGTGGTGGCGGTGGAACTCTTCTTGGTACCTCTTGTGAGGCGATA
CTCTGCACTCTTGTGGCCGCGAGGGACCGGAAGCTCGCCGAGATCGGCGGGAAC---AGGATCTGCGACCTCGTCGTCTA
CTGCTCCGACCAGACACACTTCGCCTTCCGCAAGGCCGCACGCATTGCCGGCATCCTGCGTGACCACTGCCGCGCCATAC
CCACGTGCCACCACAACATGTTCGCTCTCCCGCCCACGGAACTGCAAGCGGCCATGCAGGCTGACGTGGAAGCCGGGCTG
GTGCCACTTTTCTTGTGCGCGACGCTGGGGACGACCCAGACGACTGCCGTCGACCCCATCGGCGAGCTGTGCGCTGTCAG
TGCACCACACGGCGTGTGGGTGCACGTGGACGCCGCCTACGGCGGCTCCGCGCTAGTCTGCCCGGAGTTCACCCACGTGA
TCGACGGCGTGGAGGCCGTCGACTCGTTCAGCATGAACGCCCACAAGTGGCTCCTCGCCAACA-----------------
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>SNPs
--SS-S--S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS-----------------S-------S-------S----S-----S-----S------
--------S----------S---------------------------------S-------------S--------S---
-----S--------------S--------S-------------------S--------SSS-------------------
--------------S-S-S----------S---------------------S----S----------S----S-------
--S---S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-----S--S-----------SSSS---------------S
----S----------SSSSSSSSS------S-----------------------S--S----------------------
--------------------------------------------------------------SSSSSSSSSSSSSS----
-------------------------S------------------------------------------------------
-------------S------SSSSSSSSSSSS---------------------------------------------S--
--S-----------S--------S--------------------------------------S-----------------
---------------S----------------------------------------------------------------
-----------------------------------------------S--------------------------------
-----------------------------------------S--------------------------------------
------------------S------------------------------------S------------------------
----------------------------------------------------------S---------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------S--
------S--------------------------S----------------------------------------------
------------S-------------------------------------------S-----------------------
------------------------------S----------------S--------------------S--S--------
-----------------------------------S--------------------------------------------
-------------------------------------------------------------------S------------
-----------------------------------------S-------------------------S------------
-----------S-------S------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------SS----------------------------------
-------------------------------------------S------------------------------------
------S------------------------------------S------S------S-----------------SS---
----------------------------S--------S-------S----SSS---------------------------
-------------SS---------------S-------------------------------------------------
-S-S---------------------------SS-S----------------S----------------------------
-----------S------------------SSSSSSSS-S----------------------------------------
----SSSSSS-----------------------------------------------------------------S----
-S--------------------S------------------S--------------------------------------
----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_948
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------------------------------------------------TCCACGCCTTCTTCACTCAC------------
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>reverse_2684
--------------------------------------------------------------------------------
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-------------------------------------------GGCGTGCATGAGAAATGGC------------------
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>forward_949
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-------------------------------------------------CCACGCCTTCTTCACTCACT-----------
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>reverse_2894
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-------------GACGTCACAACACAAAAGCA-----------------------------------------------
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----------------------------------
