>input_sequence_44992
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGCCAATGCAAATGTGATGCCAAGGCATCTACCGCTGC
ATTTATTGGAAGAACTGACTGATGGTTTCTCCCAAGACCAGGAACTTGGTAGCGGTGCATACGGCAAAGTTTATAGGGTA
AGATTAATCACTCACAACTTAATAATGTATGATTATAGGTTGTGAACAAATCATCATCCGTTGCACACTTGTTTTGATCT
GTTGTGGAAAAGTCAATAATCTGTTTAGTCATTAGTGGAGGAAGCATTGCATGCTTACAAATTCTGAAGATAAATTTTAG
TTTAACACACTGCCCAATTTAAATCACTGAGTACATTAATTATCATTCTCTAGCAATCTCGTGGAGGACCAACTTACGTA
CTCCCTCCTTTACTCAATAGATTTATGCATGTGCTCTATTGAGAAGAGGATGGAGTATGGTTTCTCAAAAACTGATTCGT
ACTCAAGCACAAGTAGTTGAGTATTTTTCTGTGCTTTGTACATGTAATATAAATCCCTAGAAACAGAAAACTGAACTGTA
TATCTGCCATAGGGTGTATACAAAGATGGGAAAATGATTGCCGTGAAGATTCTTTATGACACGCCAGGATATGACGATGA
GCAATTCGACAAGGAGTTTCACAATCTTACAATTCTCCAACATGAGAATATTGTGCAGTTAGTAGGTTATTGCCATGAAA
CCCAGCGAGAATGTGTGCAGTACGATGGAAGAATGGTTCTTGCAGATGTGACAAAGAGGGCACTTTGCTTGGAGTATATG
CAAAATGGAAGCCTTGACAAGTATCTTTCTGGTATATATATGATGAAGATGCTTTAGTTGCCTAGGTAGCAAGTTAATTG
TTTAGTAATGGC--------------------------ATATATGTTTCAAGAATTCTAATGTTGTT----------TTG
GTTGCTGTAGATGAATCTAAGGGGCATGGTTGGAACACACGCTACATAATAATTAAGGGCATTTGCAATGGTTTGAAGTA
CCTTCACGAGGAACTGAAACCTCCTATTTATCATTTGGGTCTAAAACCAGCGAACGTACTGTTGGATGAGAACATGATCC
CGAAAATCGCTGATTTTGGATTGTCTAGACTCTTTGGAGAAGAAAAAACCCAAATCACTAATAGTCCTATAGGAACACTG
TAAGTTAAACTTCAAGGATGTGTTCTTCTTGTTCTTCTTCTAAGCAGAGAATTAGTTTCAATTCGAATTAGACACATGCA
TGATATCAGTGAGACAGTGACATATACGTTGTGTCATGCTTGCAGTGGGTACTTACCTGCAGAGTATATAAATCATAACA
TAATCTCAAATAAGTTGGATATATTCAGCTTGGGTGTTGTAATGATAAAGATAATTGCGGGACCTAAAGCCTACTCCAGA
AGTGCTGAAATGTCATCCGAGCAATTCATTGACATTGTAAGCATTGC-T-TGTACTGAGAAAATTTGTTCATTCTCATTA
A--TTGTGCATTTTTATCTTCTAATATACTTCTTTATGTGTTGAAATGCCAGGTACATGGAAATTGGATGAACAGGCTGA
AAGCAATATCAGA------------GGAGTCATATTTTGAGCAAGTAAAGAGATGTATAGAAATTGCTTTAAACTGTGTG
GAGACCGACCGACAGAAAAGGCCAACTATAGGGAATATTGTTAATACGTTGAATGAGACAGAGACATTAGAACATGATCA
AGCGCCAACTAAAGGGTATATTATTAATACATGTTGA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G039100
AGCAGAGTTTGTACATTGCACCTAAGGCTGGTCACAATGGGCAGGAACATAAGCTAGTAACCTACACAGTTTCCTAGACT
ATGTTACTACCTCCATAGTGGGTAGGAACATGTATGTAGTATCATGCAGCGATGTATTTATTAGGATATAGACTCATTGT
TTCTTGAAGTGTGTGATGTTCCGGTAACTTAGCTAGTTACCACAAGCAGCTCTCTCTTCATTAAATACGTGCCACATAAG
CAAACTTGTATTGAAGTGTGTAATGTTACTCCTAAGTTCCTGCCCATTGTGACCAGCCTAAATCATCAACTACCATACAT
ACAGGGCATCCAGCCTGGCGCATTAAGTGCGCATTAACTAAAACTAATCGAATTACTAACTGGTCAAACTATGCCGTTAT
CAGAAGTAAGCTTTCACAAATCACATGTTACCTTGTCTGCCATGTTAGCACCTTGATTCTTAATTGTTTGAATATAGAGA
CCAACATCATCTCGGATACCGATCGACTCACCTTATAGCTGCTTAATCCGGCTAACGGTGTAGTCTCATCCGTCTAGTTT
AATCCACTTGCGTCTATAGAGGATTAGGAAGACCGGTCTGGCTGCTCATTTTCATTCCCCTCCATTGATCGATGAGCCCA
TAGTTCCTCGCTGCAAGTCTTCACCAGGTTAGTACTTCCGCCATTGCTCCCCGTTGAGTCTTTACTGTCATAAGCACAAA
TGGCTGTCAAATCCATGTGTCTTTGGTCATCGCAGATCTGTGCTTACTTCCAAATCTCACATTATTCTTACTGTAGATCA
CCATGTATCTGTTGTATCTATTGGACAATACGAGGTAGGAGTCTCGTTCGCCACAGGAGTTTAGATCTAAGGTGTGCAAG
CTTGACTGGTTTACTGGCAGAGATCAACAAGGAGCTTAAATCTGAACTATTGCTAATTATATCTGTATAAGCATGCAGCT
GGTTTGCTTTTTTACTTTTCCAATAATAGGAAGCAATAATATGGCCAATGCAAATGTGATGCCAAGGCATCTACCGCTGC
ATTTATTGGAAGAACTGACTGATGGTTTCTCCCAAGACCAGGAACTTGGTAGCGGTGCATACGGCAAAGTTTATAGGGTA
AGATTAATCACTCACAACTTAATAATGTATGATTATAGGTTGTGAACAAATCATCATCCGTTGCACACTTGTTTTGATCT
GTTGTGGAAAAGTCAATAATCTGTTTAGTCATTAGTGGAGGAAGCATTGCATGCTTACAAATTCTGAAGATAAATTTTAG
TTTAACACACTGCCCAATTTAAATCACTGAGTACATTAATTATCATTCTCTAGCAATCTCGTGGAGGACCAACTTACGTA
CTCCCTCCTTTACTCAATAGATTTATGCATGTGCTCTATTGAGAAGAGGATGGAGTATGGTTTCTCAAAAACTGATTCGT
ACTCAAGCACAAGTAGTTGAGTATTTTTCTGTGCTTTGTACATGTAATATAAATCCCTAGAAACAGAAAACTGAACTGTA
TATCTGCCATAGGGTGTATACAAAGATGGGAAAATGATTGCCGTGAAGATTCTTTATGACACGCCAGGATATGACGATGA
GCAATTCGACAAGGAGTTTCACAATCTTACAATTCTCCAACATGAGAATATTGTGCAGTTAGTAGGTTATTGCCATGAAA
CCCAGCGAGAATGTGTGCAGTACGATGGAAGAATGGTTCTTGCAGATGTGACAAAGAGGGCACTTTGCTTGGAGTATATG
CAAAATGGAAGCCTTGACAAGTATCTTTCTGGTATATATATGATGAAGATGCTTTAGTTGCCTAGGTAGCAAGTTAATTG
TTTAGTAATGGC--------------------------ATATATGTTTCAAGAATTCTAATGTTGTT----------TTG
GTTGCTGTAGATGAATCTAAGGGGCATGGTTGGAACACACGCTACATAATAATTAAGGGCATTTGCAATGGTTTGAAGTA
CCTTCACGAGGAACTGAAACCTCCTATTTATCATTTGGGTCTAAAACCAGCGAACGTACTGTTGGATGAGAACATGATCC
CGAAAATCGCTGATTTTGGATTGTCTAGACTCTTTGGAGAAGAAAAAACCCAAATCACTAATAGTCCTATAGGAACACTG
TAAGTTAAACTTCAAGGATGTGTTCTTCTTGTTCTTCTTCTAAGCAGAGAATTAGTTTCAATTCGAATTAGACACATGCA
TGATATCAGTGAGACAGTGACATATACGTTGTGTCATGCTTGCAGTGGGTACTTACCTGCAGAGTATATAAATCATAACA
TAATCTCAAATAAGTTGGATATATTCAGCTTGGGTGTTGTAATGATAAAGATAATTGCGGGACCTAAAGCCTACTCCAGA
AGTGCTGAAATGTCATCCGAGCAATTCATTGACATTGTAAGCATTGC-T-TGTACTGAGAAAATTTGTTCATTCTCATTA
A--TTGTGCATTTTTATCTTCTAATATACTTCTTTATGTGTTGAAATGCCAGGTACATGGAAATTGGATGAACAGGCTGA
AAGCAATATCAGA------------GGAGTCATATTTTGAGCAAGTAAAGAGATGTATAGAAATTGCTTTAAACTGTGTG
GAGACCGACCGACAGAAAAGGCCAACTATAGGGAATATTGTTAATACGTTGAATGAGACAGAGACATTAGAACATGATCA
AGCGCCAACTAAAGGGTATATTATTAATACATGTTGAACGAGACAGAGACATTAGAAAATGGCCAAGCGCCATCGAAGGA
GAAGGACCAGCAGGTGTGATCACGAAAAGCACTAATATACACTGGTGCCATGAACTGGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TCTGCAATTAAGGCACAGCCATGT
TATAAGTACTCCCTCCGTTTCTTTTTACTCCGCATATAAGATTTGGTCAAAGTCAAACTAGACAAAGTTTGACCAAATTT
ATATAAAAAAATATGAACATCTACAATATTAAAACTATATAGTATGAAAATACATTTTGTGGTGCATCTGATAATATTAA
TTTCATATTATTAATGTTTATATTTTTTAATGTAAAGTTAGTCAAACTTTATAAAGCTTGACTTTGACCAAACCTTATGT
GCATACTAAAAAGAAACGGAGGGAGTATTAAATAACCGTTTTCCTTTCTTCTTACATGCAGATGAGCTCTTGCATGAACG
AAAAGAGTACTGACATGATATATGTTTATCCCCGCAAGCTCCACTTTTCTTTCGGGCAAGACAAGTCAATCTCCTGCCTG
GTTCTAGTAACTAACAACATGGATTATCACCATGTCGCCGTTTGGTTTGTCCGAACAACTAGCGAGGCAAAAA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTTACTACCCCAATCT------GGGTTGGCTCAGTGGTGTTGTGCCACCAAGGTCCACACA-------------
--------------------------------------------------CACCTTTGTTGTAATGATGGAAGAGCAGCA
GCAGCAAACCGAGAATATGGGCATGCTTGACATCGCCGTAGAGAGTTGCCTAGGGCAAGCGGAGATACCATTCATTTCTG
ATTTTTTAATGCATGCTAGAGAAGAAAAGAGAAGTGAATTTCAAAAGCTAACGGCGGTTTGTGCAATAACATGCAAAACG
ATGACACCTGAGGTTGGTTAGTTGCATTCTGAATGAGTTTGAACTTGCTAAAATATATAGACGCTTAGGTGTTTTATGTA
CTCTGATAAATTTTTTCCTTGATTTGATCTTCTGTTTTCGGCTGGATATGGTGCATGGTTTTACCCGGCAGCCAAT
>chrUn_25
------------------------AGGCTGGTCACAATGGGCAGGAACATAAGCTAGTAACCTACACAGTTTCCTAGACT
ATGTTACTACCTCCATAGTGGGTAGGAACATGTATGTAGTGTCATGCAGCGATGTATTTATTAGGATATAGACTCATTGT
TTCTTGGAGTGTGTGATGTTCCGGTAACTTAGCTAGTTACCACAAGCACCTCTCTCTTCATTAAATATGTGCCACATAAG
CAAACTTGTATTGGAGTGTGTGATGTTACTCCTAAGTTCCTGCCCATTGTGACCAGCCTCATGCTCGCATCCAACACCTC
CCCGCATTCCCCGCTCCCCCATCGTTGGCCAAGCCCTACGAGA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TCCCCTCTACAAATTGCCGCCCCCT
TTGCTCTTGCCTCTTCGTC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GATCT
GTCGCGCCCCACACATTGCTCTCCTTCGTCCTTATGCCAGTACACGGCGAGTACGTCCAGCTGCNNNNNNNNNNTGGG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTGGGGCAACACAGAGATGGGAGGGGAGGCGTCGTGAAGGTGTGGCGGCTGGAGGCGATGGGGGGAGGCGT
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TGAAGGTGCAGCGGCTGGAGGCGATTGGGAGCGGAGCGATGATGCAGCGGT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TATTTTTCTTTCTTTCTTTCTTGATTGATGTGGGC------------------------------------------
---------------------AGTTTAATTCCTTTCGTGCCAAAGGAAGGTGACCACGGAAGAGAACATACTTTCCTTTC
TTTCTTG-------------------------------------------------------------------------
-----ATTGATTG-------------------------------------------------------------------
--------ACGTGGGCAGTTTC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTTCCTTTCGTGGCAAAGGAAGGTGATCATGGAAGAGAAAG
TTGTGTTTAGCGTTAAACGCGTTTAGTCGCTCACCATTAGGACGATAACAACTGTTGGATGAATGCGAATGGATGGCCGA
GA----------------------------------TCTGTTAGATCTGCCCCACCGGGTCTTTTTATATTGGTATAGAT
ATAGATGGTAATTAGGAAATACTAATTTATACTACAATTTGGAAGTACTGCTGATTTGGAAACGTACCAGCAAAACATAC
AGAGAGAGAAATTAATTCACTTGCAATATCTTAGGAATTCTGGCCAAATACCATGTCAAATCTGACCTAATTTGAATCAA
TCCCGGCCAGGCTGAAGGTGGACGGACGTGGGCCCTGCTTATTCTAATCCCATCTCTCTCCTCCTAATAAATCTCTGACG
GGATTCTAGTCAATCCGCTGAACAAATCTCGTTCTGAACAATGCTCTTCAATTCTCTCCTTGAAATCAGGGACTCATTGA
ATGATCCTCTCCCCAAACCAACGCAGCTCTTCGTTTAATGGCGCAGGCACAGCCTTCTCTTCGCCCCATGCATGCGCTGG
CTTCTCCTCTCCTCCATTACTCTCTTCCTCCCTTCCTCCGGTTCCTGTGGCGATCCATCCCTCTTCAATCCATTGGTCGC
AGGCTCTTGCGCGCGCCTCACGCGGATCAGGCTGGTCACAATGGGCAGGAACATAAGCTAGTAACCTACACAGTTTCCTA
GACTATGTTACTACCTCCATAGTGGGTAGGAACATGTATGTAGTGTCATGCAGCGATGTATTTATTAGGATATAGACTCA
TTGTTTCTTGGAGTGTGTGATGTTCCGGTAACTTAGCTAGTTACCACAAGCACCTCTCTCTTCATTAAATATGTGCCACA
TAAGCAAACTTGTATTGGAGTGTGTGATGTTACTCCTAAGTTCCTGCCCATTGTGACCAGCCT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5D_1416
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TATGATTTTTCAGAAATCTATGCAT
ATTTAAGGACGTGTATTTGGGTAATATTTTCCGCTTTATAGATGCCACATATGTCCCTATTAACAGAAAACTAAACTATA
TATTTCCAATAGGGGGAGCGGGAAGATGGTCAAAAAATTGCTGTAAAGATTCTTCACGACATGTCAGGACATGACGATGT
GCAATTTGATAAGGAATTTTACAATCTTGTAAATCTGCAACACCAGAACATCGTGCAGTTAGTTGGTTATTGCCATGAAA
CCCGACGAGAATACTTGCCGTACAACAAAACTAAGGTTCTTGCTGAGGTGACAAAGAGAGCGCTTTGCTTTGAGTTTGTG
GAAAATGGAAGCCTTAACAGCTATCTCTTTGGTAAATCC---ATGATGATGATCCACTTGAATACATAGCATGTTAACTG
CTCATTTTGTGTGTGTGTGTGTATATATATATATATATATATATGTTTCAAGATTTATAATATTGTG----------TTT
GTTTCTACAGATGAATCTAAGGGACATGGTTGGCGCACGCGCTACGCCATAATCAAGGGTATTTGCAATGGTTTGAAGTA
CCTTCACGAGGAATTGAAGCCTCCTATTTTTCATTTGGATCTAAAACCAGCCAACATATTGCTGGATAAGAACATGATCC
CGAAAATTGCTGATTTCGGATTGTCCAGATTCTTCAAGGAAGAAAAATCTCATAGCACTAACAGTCCTATAGGAACACTG
TAAGCTTATTCTTCATGTGAACTGTTTC-----ATTTTTCTAAGCAGAGAATT----CCTATTTGCCTTGGGCACAGGGA
A--TGTCAGTA--------ACATATCCGTTGTGTCGTGCTTGCAGTGGGTACTTACCACCGGAGTTTATACATCATAGAA
TAATCTCAAATAAACTGGATATATTCAGCCTGGGAGTTGTAGTTATAAAGATAATTGCAGGTCCTCCAGGGCACTGCAGA
AGTGCTGAAATGAGCTCTGAGCAATTCATTAAGATTGTAAGAAAATTGTATTTATTGATCTCGGATGTACATTGTCATTC
TACTATTTTTCTTTCTTTTACCCACCG--TTCTTTGTGTTATCATTATCCAGGTACATGGGAATTGGATGAATAGGCTAC
AATCAGTGGTGTCAGGGAATTAGTTGGAGTTGTATTGTGAACAAGTAAAGAGATGCGTCGAAATTGCTTTAAGCTGTGTG
GAGGCCGATCGACAGAAAAGGCCAACTATAGGGGATATTGTTAATATGCTAAGTGAGACGGAGACACTAGAAAATGACAA
GGGGCATTGATTG-------------------------------------------------------------------
--------ACCAGGTATGGTCAGCAATACCAGAATCTATTTTCCTAGCCTAGTATGATTGTAGTCGTTTTTTTGTTTTGT
TTTCCCATCCTATAAAAAAACAAAAGCCAGGCTTTTTTTTTGCGGGTGAACAAAAGCCAAGCTTGAACACACGCGCGCGC
GCGCGCACACACACACGTTAATTTTCTTAAGTTTGATCGTGGGATGATTCACCCGGTCTGCCCTTGCGGCATAGCCACGT
TATTGTAGTTAACCTCGTGG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CTTTCTTCTTGCATGCAGATGAGCACTTGCATGGTCA
AGGACACTGAAC---TGATAGATGTCCATCCCCTCCAGCTCCACTTCTCTTTCCGGCCGAATAAGATTATCTCCTGCCCA
TTTCATGTAACTAACAACACCGATGATCAGCATGTGTCTGTTAGGTGTGTCCCAAGACTCCCAGGGGCAGACC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTTATTACGCATATCT------GGGACACGTATGCAGTGTTGTGCCACCAAGGTCCACACA-------------
--------------------------------------------------CACCATCGTTGTAACGATGAGACAACTACA
GCAGCCGCCGGACAACATGGACATGCTTGACATAGTCGTAGAGACTATCCTAGGGAAAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr7D_1546
ATGGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AAAAGGATTGCTGTGAAGATACTCTATGACATGCCAGGAATTGATGATGA
GCAGTTTCAGAATGAGTTTAACAATCTTACAAGGCTCAGACACCAAAATATTGTGCGATTAGTTGGCTATTGCCACAATA
TTCAGGAAATACAAGTAGAATACAAAGGTAAATTGGTTCTTGCTGAAAAGACACATAGAGCGCTCTGCTTGGAGTATATG
TCTAATGGAAGCCTTGACAAGTATCTTTCTGGTAA--------TGAAGATGTTTTTCTTGTTTTAGTTGGC---------
------------------------------ATATTAATATATCATTTTAAAAATTTAGAGCTCGAGAATTCTCCTAATTT
GGTTTTGCAGATGAGTGTGATAGATATGATTGGCAGACAGGCTATGGAATAATTAAGGGGATTTGCCAGGGTTTGAAATA
CCTCCACAATGAATTAAAACCTCCTATTTATCATTTGGATTTAAAACCAGCCAATGTATTACTGGATGAGAACATGGTTC
CCAGAATCGCAGATTTTGGGATGTCAAGGCTCTTCAGAGATGAAAAAACACGAGCTACAAATAGTTCTTTAGGAACAATG
TAAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr3B_1853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ATATATGTTTCAAGAATTCCAATAATGTC----------TTT
ATTTCCATAGACGAATTTAAT-GGCATGGTTGGCGCAAGCGCTACACTATAATTAAGGGTATTTGCAATGGTTTGAAGTA
CCTTCACGAGGAAATGAAGCCTCCTATTTTTCATTTGGATCTAAAGCCACCCAACATATTGCTGGATAAGAACATGATCC
CGAAAATTGCAGATTTCGGATTGTCCAGATTCTTCAAGGAAGAAAAATCCCACATCACCAATAGTCCTATAGGAACACTG
TAAGCTTATTCTGCATGCGAGTAGGT-----TTATTTTCCTTAGCAGAGAATT----TCTATTTGCACTGGGCACACACA
TGGTGTCAGTA--------ACATATGCGTCGTTTCATGCTTGCAGTGGGTACTTACCACCAGAGTTCATAAATCAGAACA
TAATCTCAAATAAGCTGGATATATTCAGCTTAGGTGTTGTAATCATAAGGATAATGGCCGGAACCGAAGGCTACTCCAAA
AGTGCTGAAATGCCGCCCGAGCAATTTACTGAGATCGTAAGAAGTGCCT-TTTATTGATATGAGTTGAACATTCTCACCA
G--TAGTGTTCTGTTTTTACACTAGCG--TTCTTTATGTTCACATTATACAGGTACACGGGAATTGGAGGAATAGGCTAC
AATCAGCGGCGTCAGGGGATTTGTTGGAGTCGTATTCTGTACAAGTAAAGAGATGCATCGAAATTGCTTTAAGCTGTGTG
GTGGCCGACCGACAGAAAAGACCAACTATAGGGGCTATTGTTAATATGCTAAGTGAGAGAGAGACACTAGAAAATGATCA
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------------
----------------------------------------S---------------------------------------
------S-----------------------------------------S------------------S------------
-------------S-------S-------------------------------------S-SS-SSSS-SSSSSSSS-SS
S-S-SSSSS--S--SSSS-SSSSSSS-SS-SSSSSSSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-SSS--S-SS-SS---S
-S-S--S-SS--SSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
--S-S-SSSS-SS--S-SS---SS--S---S---SSSS--S-SS-SSS-SS-S-S-S--SS-S-SSSSSSSSSS-SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---S---S---SSS--S-S-
-S-S---S--SS---S---S---S-S--S-SS-----S--S---SS-S---SS------SS-----------S----S--
---S-S-S------S-S-S---------------S--------------------------S-------S----------
------S--S---------S------------S---------SS-------------------S----------------
------------SS---------S-S----S------------S--S-----------S--S------------------
S---------------------------------S--SSSSS---------S----S---SS--S------S-----S--
S-S-S-SSSS-S-------------------------------------------------S----S------------S
---S-----------------------------S------------S------------S--------------------
-------------S------------------------S------------S------S--S------------------
-------------------------S--------SS--------------------------------------------
----S-S-SSS-SS-S-SSSSS-SS---SSS--S--S----------------SSSS--S---S-S---S-S----S---
--S-S-----SSSSSSSSS------S-------------------------------SS------S--------------
--------------S----------------------------S--------------S------S---S----------
------------S-S-----------------S--------S-S-------S--S---S-SS-S----S-----------
S---S---SSS----S-S----S--SSSS----------SS-S-SSSS------------S-----------S-----SS
--S--S-SS-SSS------------------S----S---S--------------S--S-------------S-------
---S-----------------------------S------------S-S-S-S-------------S-----S-------
--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-S-----S--S---SS--S-S--SS-SSSSSSSSSSSS---SS-S-SSSSS---------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------SS--SS----S-----S--
---SSSSSS-SS-SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S------------
-SS---S--SS-SS------S----S-------S------------S----------S-S-S---SS-----------SS
----SS-------------SS---S----S-----SS-S---S---S-----S----SS-SSS-S----S-SS-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------SSSSS-SS--S--------------------------------------
---------------------------------------------------------------------S------SS--
---------S--S-------S------------S----------S-SS-------S---SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CATTGCTCCCCGTTGAGTCT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2266
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ACGTTGTGTCATGCTTGCAG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_1028
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGCAAATGTGATGCCAAGGC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2794
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGAAGGA
GAAGGACCAGCAG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
