>input_sequence_44989
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------ATGTCGTCCGACGGCGGGGGCTCCCAGA
TGGGCGTCGCCGGCGCGCTGGGCCTCTCGGTCACGTCGTCAGTAGCCATTGTTATTTGCAACAAGTACCTCATGAGCACC
CTTGAGTTCTACTTCGGTTAGTACAACTACTTTCAGGGTTTTAGACTCTCGG-TGCTGCTGCTGCTTACTCCGTTCGACA
ACACTTTTGTCATCAAGTGCACAAAATGGACATTTCGATCTTTGAACTTTCTGATCTGTGTGTGCTTGAAATTTGGATAT
TGCAGCGACGACACTGACGAGCTGGCACTTGCTGGTGACCTTCTGCACGCTTCACATAGCGCAGCGCCTGCGCTTCTTCG
AGCCGAAGCCAATCGACGCGCAGACTGTCATCTCCTTTGGGTTTCTCAATGGAATCTCCATTGGCCTCCTCAACCTTTGC
CTTGGCTTCAACTCAGTTGGCTTCTACCAGG----CAAGCCACCCAAACTGCTGATGATATCTCATAC-----CATTTCA
TTTGTTTTCTTACTCGTGGATTTGCTATGTTTGTCTTGCTACAGATGACCAAGCTGGCTATTATACCCTTCACCATGCTC
TTGGAGACCATCTTTTTGAGCAAGAAGTTCAGGTGCTTCTCAGATTCCTTCTCGCATTAGGCTTTTTC------------
--CTGATCATCTTGTAGCAAGTTCAGCCTTTCTCATGCTCCACAATCATTAACCGTGCAGCCAGAGCATCAAGGCCTCTC
TCATGGTCCTCCTCCTGGGAGTTGGCATCGCATCGGTCACTGATCTCCAGCTCAATCTCCTCGGCTCAATCATCGCAGTG
CTCACCATCGCTGCGACCTGTGTCTGCCAGATCGTATCCTTGTGCTCTGCCCCTCCATGAAACTCAAGCTATCTAAGCTA
GTTGTTAGACTGTTC-ACATTTGCAGTTGCACCCTGAATATTCGTGTTCATGTCGTCTTCCCTGACCTTGAACAAAGCTG
ACCAACCAAATCCAGAGGAGGCTCAAGGTGTCTTCCACTCAGCTACTGTACCAGTCCTCCCTGTACCAATCCGCTGTGCT
GCTCATCACCGGCCCCTTCGTCGACAAGCTCCTGACAAAGAAGGACGTCTTCGCGTTCGAGTACACATTCGAAGTCGTGG
TACGTACTACATGT---GCAGCAGCAGCAAGAACTGAACTTGTTGATGTAAAAGATGAATAAAATTGAGCTGCGCTGAAC
CAACTTTCTGGGCGCAGGTGTTCATCCTGATGTCGTGCGGGATCGCGGTGAGCGTCAACTTCAGCACCTTCCTGGTGATC
GGCACGACGTCGCCAGTGACGTACCAGGTGTTGGGCCACCTCAAGACGTGCCTCATCCTCTCCTTCGGCTACGTTCTCCT
CAAAGACCCCTTCACGCTCCGCAACCTCGCCGGCATCCTCATCGCCATCTTCGGCATGGGCCTCTACTCCTTCTTCTCCG
TCTCCGAGAGCAGGAAGAAGACCGAGGGCGCCACGTTGCCCGTCAACACCCAGGTCTGTACTTTTCCTGACACGTTAGTA
TCTGAATCTGGAATGGCGTATGACAAGGTTTTAACCGGCGTGTGCTCTTGCAGATGAGCGAGAAGGATTCGGCACCGCTC
CTTGGCACGAAAACCTCGCCGTGGCAGGAGAGCAACGGGGTGGAGAACTTTGACGACGTGCCACGGACGGCGAAGAGCGC
GTTTAGCCGGCAGCTGAACCCGTAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr1B_1_TraesCS1B01G173400
TACCCGTGAAGGACCACTACCATGTCACTGTCTATTGTAGTGTTGCTCACAACTGTTGTGTGGTAGCAGTCATCTTGTAC
AGGTGCTAAGCATGTCATGTAGATAAAAAATCTGATGTGACAAAATAATTAAGAGGAGAGAGATGGGTTTGGTGACCCCA
GAAAAAACAATGCCAAGCGGGCAAACCTAGAGCAAACATTTAAAGAAGCAAGCTCACTAATGCATGAAAGAGTTTAGTAG
CTAAGTCATTAAATGTAGGGAGCTTAGCAACAACAACTTAGCACCAATGCATTCGGGACTACAGTTGTTTCTCTGATACA
GGTTATTTAGAGATGTACCGAGACTTTTTGTTTATGGTCCTCTCTACAATGTGTGGAGAATCGACACCTGTTTACGGAAG
TGTGTACATGATTGAAGGATACGGCGAGGGATACTTTTACCCAACATGGATGGTAGCATGATCATAGAATTGGCCCACCT
CCGCTTTAGGCATTATACAGTCTCTACATGTTTCTTTGTATTTTGCCTTTTTAATTTTCGTTTGTGTGAGAGAACTTGTT
TAACCGAAGAGAGCTGTGTGCATCGTAGTTATGCAGAGTCCAGATGTAATGCTTAAACCTTTTAAGTAATAAAGCATCTT
TTTTTCAAAAAAGAGTTGCTAAACTATTTAATGCGCTTAGCACCTCATCTAAGCAACTATCCATTGGAAGAGGTCTTTAG
TGAGTATTATAAAGATGAAGCGACGTGAAACTTTAATTTGTTTTACTGCTTG-ACGTGGCAAGGATTTTCTGCGGTGCCC
AT-GTCAACGCTGCGTTTCCATAGACGAACTCACGTGGTTCCCTGACGGATAACCGTGCTATAAAAACTTGTCAACTTAA
CCATCTTCTGCTCGCTCC---TACTCCAGGGAGTGTATATCATATAGCTTGTGATTCACCAACTGGGCCTTGATCTACCA
CCAGGGACAGG-------ACAGGGAGGAAGCGGTTCAGAAGACGAAGAGGAGATGTCGTCCGACGGCGGGGGCTCCCAGA
TGGGCGTCGCCGGCGCGCTGGGCCTCTCGGTCACGTCGTCAGTAGCCATTGTTATTTGCAACAAGTACCTCATGAGCACC
CTTGAGTTCTACTTCGGTTAGTACAACTACTTTCAGGGTTTTAGACTCTCGG-TGCTGCTGCTGCTTACTCCGTTCGACA
ACACTTTTGTCATCAAGTGCACAAAATGGACATTTCGATCTTTGAACTTTCTGATCTGTGTGTGCTTGAAATTTGGATAT
TGCAGCGACGACACTGACGAGCTGGCACTTGCTGGTGACCTTCTGCACGCTTCACATAGCGCAGCGCCTGCGCTTCTTCG
AGCCGAAGCCAATCGACGCGCAGACTGTCATCTCCTTTGGGTTTCTCAATGGAATCTCCATTGGCCTCCTCAACCTTTGC
CTTGGCTTCAACTCAGTTGGCTTCTACCAGG----CAAGCCACCCAAACTGCTGATGATATCTCATAC-----CATTTCA
TTTGTTTTCTTACTCGTGGATTTGCTATGTTTGTCTTGCTACAGATGACCAAGCTGGCTATTATACCCTTCACCATGCTC
TTGGAGACCATCTTTTTGAGCAAGAAGTTCAGGTGCTTCTCAGATTCCTTCTCGCATTAGGCTTTTTC------------
--CTGATCATCTTGTAGCAAGTTCAGCCTTTCTCATGCTCCACAATCATTAACCGTGCAGCCAGAGCATCAAGGCCTCTC
TCATGGTCCTCCTCCTGGGAGTTGGCATCGCATCGGTCACTGATCTCCAGCTCAATCTCCTCGGCTCAATCATCGCAGTG
CTCACCATCGCTGCGACCTGTGTCTGCCAGATCGTATCCTTGTGCTCTGCCCCTCCATGAAACTCAAGCTATCTAAGCTA
GTTGTTAGACTGTTC-ACATTTGCAGTTGCACCCTGAATATTCGTGTTCATGTCGTCTTCCCTGACCTTGAACAAAGCTG
ACCAACCAAATCCAGAGGAGGCTCAAGGTGTCTTCCACTCAGCTACTGTACCAGTCCTCCCTGTACCAATCCGCTGTGCT
GCTCATCACCGGCCCCTTCGTCGACAAGCTCCTGACAAAGAAGGACGTCTTCGCGTTCGAGTACACATTCGAAGTCGTGG
TACGTACTACATGT---GCAGCAGCAGCAAGAACTGAACTTGTTGATGTAAAAGATGAATAAAATTGAGCTGCGCTGAAC
CAACTTTCTGGGCGCAGGTGTTCATCCTGATGTCGTGCGGGATCGCGGTGAGCGTCAACTTCAGCACCTTCCTGGTGATC
GGCACGACGTCGCCAGTGACGTACCAGGTGTTGGGCCACCTCAAGACGTGCCTCATCCTCTCCTTCGGCTACGTTCTCCT
CAAAGACCCCTTCACGCTCCGCAACCTCGCCGGCATCCTCATCGCCATCTTCGGCATGGGCCTCTACTCCTTCTTCTCCG
TCTCCGAGAGCAGGAAGAAGACCGAGGGCGCCACGTTGCCCGTCAACACCCAGGTCTGTACTTTTCCTGACACGTTAGTA
TCTGAATCTGGAATGGCGTATGACAAGGTTTTAACCGGCGTGTGCTCTTGCAGATGAGCGAGAAGGATTCGGCACCGCTC
CTTGGCACGAAAACCTCGCCGTGGCAGGAGAGCAACGGGGTGGAGAACTTTGACGACGTGCCACGGACGGCGAAGAGCGC
GTTTAGCCGGCAGCTGAACCCGTAGCTTAGGATGGATATGCTTTGGTAAGTTGGTATAGCAGCATCAGTATCTATTCTTT
CCCCTTCGAGGTTTCTCCTACAATGATGAGAATTGCTCGATAATGAAAGTAATGGTGGTATTGTAAGGTGGTTCTAGGAC
CTAAAAAGTTCTGGAAGTAATGTTGGACAGCAAGTGCCAACTTCTCCTACAATGGTTGTAGGGCAGGGATCTCACAGAAA
TTGCACCAGAATTTTTCCGGAAGTTCTGCAAAAGCTGCAATTTATCATGACAATTCTCTCGTTTACAAACTCGGAA-AAC
AGCAAATGTCAATCTTTTTTCCAGAGAAAACGCAAAGGCTTGCTCCTCGATACATTTATAGGAAGAACTAGGAAATATGC
CCGTGCGTTGCAACGGGAGAAGAAAAAATATCACATGATGTGCCGGTGCGTTACTACGGGTTGCTTTTTATTTTACTTTT
AGGCCTTGTAGAATTTCGCTAAGTTATTAAGAAAATTGCGTTATTTACTTGCTCGCATCAATTTAAGCTGCTACTTGCTG
TAGCTATTTTCAAAAAGGAAAGAAGATGGCAAAATAATATAAAGTTCCATCCTATAACCATAAGTAAATTCGGTCGTAAA
TCAAAGATAGCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TACTGCAAATAGTGGACTGTCCATG--------------------------------------------------
----------------------------CTACTACAGGACCTGATCCACCCTTTCAACATCAGAGTGTTATGAACCACAA
TCACAACCAGCAGTAGTAAAATAAGACCAAGGACATATTAGTGTAGGTTGCAGAGAACCAAATACCATGAT-TCAACCCT
CCTTGTCTACATACCTCAAGTAGAAAATCAGCCGACGAAGTTCCGGCAAACTGTGGAACACTGTCAGATGAGTTGAATAG
TTCACTCCTGGCTCTTCATCAGGTAACATTTTGATCTCTCTAAGCTTTAGTTTGGAAGGACCAATGATAACAAAAACTGA
TACCAACCATG-AGCTAGAAAGGCAATATTGTAGCTCTGATTCGAAGGCCACACTATAA
>chr1D_725
TATTATAC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------AGATGAAACCACGTGAAACTTTAATTTGTGTCACTGCTTGAACGTGGCAAGGATTTTCTGCGGTGCCC
ATTGTCAACGCTTTGTTTCCCCAGGCGAACTCACGTGGTTCCCTGACGGATAACCGTGCTATAAAATTTTGTCAACTCAA
CCATCTTCTGCTCGCTCC---TACTCCAGGGA--GTATATCATATAGCTTGTGATTCACCAACTGGGCCTTGATCTACCA
CCAGGGACAGGGACAGGGACAGGGAGGAAGCGGCTCAGAAGACGAAGAGGAGATGTCGTCCGACGGCGGGGGCTCCCAGA
TGGGCGTCGCCGGCGCGCTGGGCCTCTCGGTCACGTCGTCAGTAGCCATTGTTATTTGCAACAAGTACCTCATGAGCACC
CTCAAGTTCTACTTCGGTTAGTACAACT---TTCAGGCTTTCAGACTCGGTGCTGCTGCTGCTGTTTAATGCGTCCGACA
ACACTTTTGTCATCAAGTGCACAAAAAGGACATTTCGATCTTTGAACTTTCTGATCTGTGTGTGCTTGAAATTTGGATAT
TGCAGCGACGACACTGACGAGCTGGCACTTGCTGGTGACCTTCTGCACGCTTCACATAGCGCAGCGCCTGCGCTTCTTCG
AGCCAAAGCCAATCGACGCGCAGACTGTCATCTCCTTTGGGTTTCTCAATGGAATCTCCATTGGCCTCCTCAACCTTTGC
CTTGGCTTCAACTCAGTGGGCTTCTACCAGGCAAGCAAGCCACCCAAACTGCTGATGATAGCTTATAC-----CATTTCG
TTTGTTTTCTTACTCGTGGATTTGCTATGATTGTCTTGCTGCAGATGACCAAGCTGGCTATTATACCGTTCACCATGCTC
TTGGAGACCATCTTTCTGAGCAAGAAGTTCAGGTGCTCCTCAGATTCCTTCTCACATTAGGCTCTTTCCTGAATATTGAA
CGCTGATCATCTTGTAACAAGTTCAGCCATTCTCATGCTCCACAATCATTAACCGTGCAGCCAGAGCATCAAGGCCTCTC
TCATGGTCCTCCTCCTGGGAGTTGGCATCGCATCGGTCACCGATCTCCAGCTCAATCTCCTCGGCTCCATCATCGCAGTG
CTCACCATCGCTGCGACCTGTGTCTGCCAGATCGTATCCTTCTGCTCTGCCCCTCCATGAAACTCAAGCTATCTAAGCTA
GCTGTTAGCCTGTTA-ACATTTGCAGCTGCACCCTGAATATTTGTGTTCATGTCATCTTCCTTAACCTTGAACAAAGCTG
ACCAACCAAATCCAGAGGAGGCTCAAGGTGTCTTCCACTCAGCTACTGTACCAGTCCTCCCTGTACCAATCCGCGGTGCT
GCTCATCACCGGCCCCTTCGTCGACAAGCTCCTGACAAAGAAGGACGTCTTCGCGTTCGAGTACACATTCGAAGTCGTGG
TACGTACTATATATGCAGCAGCAGCAGCAAGAACTGAACTTGTTGATGTAAAAGATGAATAAATTTGAGCTGCGCTGAAC
CAACTTTCTGGTCGCAGGTGTTCATCCTGATGTCGTGCGGGATCGCGGTGTCCGTCAACTTCAGCACCTTCCTGGTGATC
GGCACGACGTCGCCAGTGACGTACCAGGTGTTGGGCCACCTCAAGACGTGCCTCATCCTCTCCTTCGGCTACGTCCTCCT
CAAAGACCCCTTCACGCTCCGCAACCTCGCCGGCATCCTCATCGCCATCTTCGGCATGGGCCTCTACTCCTTCTTCTCCG
TCTCCGAGAGCAGGAAGAAGACCGAGGGCGCAACGTTGCCCGTCAACACCCAGGTCCGTACTTTTCCTGATACGTTAGTA
TCTGAATCTGGAATGGCGTATGACAAGGTTTTAACCGGCGTGTGCCCTTGCAGATGAGCGAGAAGGATTCGGCACCGCTC
CTTGGCACAAAAACCTCGCCGTGGCAGGAGAGCAACGGCGTGGAGAACTTTGACGACGTGCCACGGACCGCGAAGAGCGC
GTTTAGCCGGCAGCTGAACCCGTAGCTTAGGATGGATATGCTTTGGTAAGTTGGTATAGCAGCATCGGCATCTATTCTTT
CCCCTTTGGGGTTTCTCCTACAATGATGAGAATTGCTCGATGATGAAAGTAATGGTGGTATTGTAAGGTGGTTCTAGGAC
CTAAAAAGTTCTGGAAGTAATGTAGGACCGCAAGTGCCAACTTCTCCTACAATGGTTGTATGGCAGGGATATCGCAGAAA
TTGCACCAGAAATTTTCCGGAAGTTCTGCAAAAGGTGCAATTTATTATGACAATTCTCTCGTTTACAAACGCGG-A-AAC
AGCGAATGTCAATCTTTTTTCCAGAGAAAACGCAAGGCTTG--TCCTCGATACATTGATAGGAAGAATAG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr1A_725
TATTATAC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------AGACTAAGCCACGTGAAACTTTAATTCGTGTCACTGCTTGAACGTGGCAATGATTTTCTGCGGTGCCC
A-TGTCAACGCTTCGTTTCCCTAGGCGAACTCACGTTGTTCCCTGACGGATAACCGTACTATAAAAATTTGTCAACTTAA
CCATCTTCTGCTCGCTCCTACTACTCCAGGGAGTGTATATCATATAGCTTGTGATTCACCAACTGGGCCTTGATCTACCA
CCAGGGACAGG-------ACAGGGAGGAAGCGGTTCAGAAGACGAAGAGGAGATGTCGTCCGACGGCGGGGGCTCCCAGA
TGGGCGTCGCCGGCGCGCTGGGCCTCTCGGTCACGTCGTCAGTAGCCATTGTCATTTGCAACAAGTACCTCATGAGCACC
CTCAACTTCTACTTCGGTTAGTACAACT---TTCAGAGTTTCAGACTCTCAG-TGCTGCTGCTGCTTACTGCGTCCG---
ACACTTTTGTCATCAAGTGCACAAAAAGGACATTTCGATCTTACAACTTTCTGATTTGTGTTTGCTTCAAATTTCGATA-
TGCAGCGACGACACTGACAAGCTGGCACCTGCTGGTGACTTTCTGCACGCTCCACATAGCGCAGCGCCTGCGCTTCTTTG
AGCCGAAGCCAATCGACGCGCAGACTGTCATCTCCTTTGGGTTTCTCAATGGGATCTCCATTGGCCTCCTCAACCTTTGC
CTTGGCTTCAACTCAGTTGGTTTCTACCAGGCAAGCT----ACCCAGACTGCTGATGATAGCTCATACAGTACCATTTCA
TTTGTTTTCTTACTCGTGGATTTGCTGTGTTTGTTTTGCTACAGATGACCAAGCTGGCTATTATACCATTCACCATGCTC
TTGGAGACCATCTTTCTGAGCAAGAAGTTCAGGTGATTCTCAGATTCCTTCTCGCATTGGGCTTTTTCCTGATCATCTTG
A--------------AGCAAATTCAGCGTTTCTCATGCTCCACATTCATTAACTGTGCAGCCAGAGCATCAAGGCCTCTC
TCATGGTCCTCCTCCTGGGAGTTGGCATCGCATCTGTCACCGATCTCCAGCTCAATCTCCTCGGCTCGATCATCGCAGTG
CTCACCATCGCTGCGACCTGTGTCTGCCAGATCGTATCCTTCTGCTCTGCCCCTGCATGAAACTCAAGCTATCTAAGCTA
GCTGTTAACCTGTTACACATTTGCAGTTGCACCCTGAATACTTGTGTTCATGTCATCTTCCTTGACCTTGAACAAAGCTG
ACCAACCAGATCCAGAGGAGGCTCAAGGTGTCTTCCACTCAGCTACTGTACCAGTCCTCCCTGTACCAATCCGCTGTGCT
GCTCATCACCGGCCCCTTCGTCGACAAGCTCCTGACAAAGAAGGACGTCTTCGCGTTCGAGTACACATTCGAAGTCGTGG
TACGTGCTATATGT---GCAGCAGCAGCAAGAACTGAACA---TGATGTAAAAGATGAATAAATTTGAGCTGCGCTGAAC
AAATTTTCT-GGCGCAGGTGTTCATCCTAATGTCGTGCGGGATCGCTGTGTCCGTCAACTTCAGCACCTTCCTGGTGATC
GGCACGACGTCGCCAGTGACGTACCAGGTGTTGGGCCACCTCAAGACGTGCCTCATCCTCTCCTTCGGCTACGTCCTCCT
CAAAGACCCCTTCACGCTCCGCAACCTCGCCGGCATCCTCATCGCCATCTTCGGCATGGGCCTCTACTCCTTCTTCTCCG
TCTCCGAGAGCAGGAAGAAGACCGAGGGCGCCACGTTGCCGGTCAACACCCAGGTCCGTACTTTTCCTGATACGTTTGTA
TCTGAATCTGGAATGGCGTATGACAAGGTTTTAACCGGCGTGTGCCCTTGCAGATGAGCGAGAAGGATTCGGCGCCGCTC
CTTGGCACGAAAACCTCGCCGTGGCAGGAGAGCAACGGGGTGGAGAACTTTGACGACGTGCCACGGACCGCGAAGACCGC
GTTTAGCCGGCAGCTGAACCCGTAGCTTAGGATGGATATGCTTTGGTAAGTTGGTATAGCAGCATCAGTATCTATTCTTT
CCCCTTTGGGGTTTCTCCTACAATGATGAGAATTGCTCGATGATGAAAGTAATGGTGGTATTGTAAGGTGATTCTAGGAC
CTAAAAAGTTCTGGAAGTAATGTAGGGCAGCAAGTACCAACTTCTCCTACAATGGTTGTAGGGCAGGGATCTCGCGGAAA
TTGCACAAGAAATTTTCTGGAAGTTCTGCAAAAGCTGCAATTTATCATGGCAATTCTCTCGTTTACAAACGCGG-AAAAC
AGTGGATGTCAATCCTTTTTCCAGAGAAAACGCAA---------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_3180
--------------------------------------------------------------------------------
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--------------------AAGTTATTAAGAAAATTGCGTTATTTACTTGCTCGCACCAACTTAAACTGCCAGTTGCTG
TAGCTATTTTCAAAAAGGAAAGAAGATGGCAAAATAATACAAAGTTCCATCCTATAACCATAAGTAAACTCGGTCGTAAA
TCAAAGATAACTACTACAGGAGCTGATCCACGCTTTCATCCTCATATGTGACAGTCTCTTATAATTAACCAGTTCCCCAT
ATTATAACAACCATTGCATTATAATATTGTAACACTAATGAACAAAAGAAATCATTTTATCGGAAACAGGGAGCAATTAT
AACAATACTGCAAATAGTGGACTATCCATGTATTCATCTTGACATAAAACATCTAATAATCTTGAAAAGCTAAATATAGG
ATGCATAAGCTACTCGATGGGGGCATAGCTACTCCATGACCTGATCCACCCTTTCAACATCAGAGTGTTATGTACCACAA
TCACAACCAGCAGTAGGAAAATAAGGCCAAAGACATATTACTGTAGATTGCAGAGAACCAAATACCATGATTTCAATCCT
CCTTGTCTACATACATCAAGTGGAAAACCGGCCTACGAAGTTGCGGCGAACCGTAGAACACTGTCGGACGAGTT---TAG
TTCACTCCTGGCCCTACAGCATGTAACATTTTGATCTCTCTAAGCTTCAGTTTGGGAAGATCAGTGATAACAAAAACTGA
TACCCACCAT-------------------------------------------------
>chr5A_3180
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--------------------AAGTTATTAAGAAAATTGCGTTATTTACTTGCTCGCATCAATTTAAACTGACAGTTGCTG
TAGCTATTTTCAAAAAGGAAATAGGATGGCAAAATAATACAAAGTTCCATTCTATAACCATAAGTAAACTCTGTCGTAAA
TCAAAGATAACTACTACAGGAGCTGATCCATGCTTTCATCCTCATATGTGACACTCTCTTATAATTAACCAGTTCTCCAT
ATTATAACAACCATTGCATTGTAATACTGTAACTCTAATGAACAAAAGAAATCATTTTATCGGAAGCAGGGAGCAATTAT
AACAATACTGCAAATAGCGGACTATCCATGTATTCATCTTGACATAAAACATCTAATAATCTTGAAAAGCTAAATATAGG
ACGCATAAGCTACTCGATGGGGGCATAGGTACTCCATGACCTGATCCACCCTTTCAACATCAGAGTATTATGTACCACAA
ACACAACCAGCAGTAGGAAAATAAGACCAAAGACATATTACTATAGATTGCAGAGAACCAAATACCATGATTTCAATCCT
CCTTGTCTACATACCTCAAGTGGAAAACCGGCCTACGAAGTTGCGGCGAACCGTAGAACACTGTCGGACGAGTT---TAG
TTCACTCCTGGCCCTACAGCATGTAACATTTTGATCTCTCTAAGCTTCAGTTTGGGAAGATCAGTGATAACAAAAATTGA
TACCCACCATGCAGCTACAAAGGCAATATTGTAGCTCTGATTTGAAGGCCACACTATAA
>chr5D_3183
--------------------------------------------------------------------------------
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-----------------------TTATTAAGAAAATTGCGTTATTTACTTGCTGGCATCAACTTAGACTGCTACTTGCTG
TAGCTATTTTCAAAAAGGAAAGAAGATGGCAAAATAATATAAAGTTCCATCCTATAACCATAAGTAAATTTGGTCGTAAA
TCAAAGATAGCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TACTGCAAATAGTGGACTGTCCATGTATTTATCTTGACATAGAACATCTAATCATCTTGAAAAGCTAAATATAGG
ATTCATAAGCGACTCGATGGAGGCATAGCTACTACAGGACCTGATCCACCCTTTCAACATCAGAG-ATTATGAACCACAA
TCACAACCAGCAGTAGTAAAATAAGACCAAAGACATATTACTGTAGGTTGCAGAGAACCAAATACCATGATTTCAATCCT
CCTTGTCTACATACCTCAAGTGGAAAATCGGCCGACGAAGTTCCTGCGAACTGTGGAACACTGTCGGTCGAGTTGAATAG
TTCACTCCTGGCTCTTCATCAGGTAACATTTTGATCTCTCTAAGCTTCAGTTTGGAATGATCAGTGATAACAAAAATTGA
TATCCACCATGCAGCTAGAAAGGCAATATTGTAGCTCTGATTCAAA-------------
>SNPs
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS---------S-------------------S-S------------------------------------
------------S-------S---S------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--SS------------------------SSS----------S--------S-------------------S---S-----
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------------------------------------------------------------------S------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S--------------------------S------------
-----------------------------------------S--------------------------------------
-S------S-----S---------------------------S-----------S------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-----------------------------------------------------S----------------
--------------------------------------------------SS----------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------S-------------S---------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
------S-S--------------------------------S--------------------------------------
-----------------------S-------------------------------------------------S------
-----------S----------------------------------------------------------S---S-----
---S-------------------------------S-SS-SSS-------------S----------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS----------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------S-----------------------------------S---
---------------------S-------S-----------------S-----------------S--S-----------
-----------------------------------------------S---------S--S--S----------------
----S------------------------------------------------------
>forward_586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AAGAGAGCTGTGTGCATCGT------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1828
--------------------------------------------------------------------------------
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-------------------------------------------------------------------AATCATCGCAGTG
CTCACCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1195
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTGCTGCTGCTTACTCCGTT-----
--------------------------------------------------------------------------------
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>reverse_2291
--------------------------------------------------------------------------------
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--------------------------------------------------AGCGTCAACTTCAGCACCTT----------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_1828
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AGCTCAATCTCCTCGGCTCA------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3111
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------GGAAATATGC
CCGTGCGTTG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
