>input_sequence_44932
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-----------------CCACCTGCTCCTCTCCTCCAACCCACGC----GCCCGCGCCCACGCACGCACTAACTACCTCC
CTCCCCCGGAGCTCC---------------GTCAA---------------GCCATGGGCGAGGACAAGAAGGAGAAGCCG
GGCAAGGCAGACGGCGCCGACCACAACAAGGACGCCGCGGCGCCGCCCGAGCCCATCGTGCTCAAGGTCGACTTGCATTG
CGCCGGCTGCGCCACCAAGGTTAAGCGGGCCATCAAGAACGCCCCTGGTACGTCTGCTTCTTCCTTTCATTCATTTCCAT
TCCACCTCCTTAAATTACGGTTCCATTCTTTCTGCTACCACTGATTTCTTTCTCACCGTTTGCCT----TTGCTTCTCCG
CAGGCGTGGAGTCGGTTAAGACTGACACGGCGGCCAACAAGGTGGTCGTCACCGGCGCGGTGGACGCGGCGGAGATCAAA
CAGCGCATCGAGGCCAGGACCAAGAAGCCCGTTCAAATCGTCTCCGCCGGAGCCGCCTCGCCCAACAAGGACAACAAGGA
GAAAGGCAAGGACAACAAGGCGGACGCCGGCGATAAGCCGGAGAAAGAGAAGAGCAAGGCAGCAGAAAAGGAGAAGGGCG
GTGCCGGTGCCGGTGCTGAGAAAAAGGAGAAAAAAGTGGAAACCGCCGACAAGCCCAAGGAGGAGGAGAAGAAACCAAAG
GAGCCCAAAGAGGTTCGTCCCTGGGCTCGCTGACTACTGTAGAATTCAACTCTGTGATATGC---AGTTAGTTACTTGCA
G-------GTGTTGTAAATGAAGATTTGGTCTCAAATTCATCTTGCCATTTTTCCTTGATTCCATCAGGAGACCGTGACG
CTCAAGATCAGGCTGCACTGCGACGGCTGCATCGACCGCATCAAGCGCCGCGTCAACAAGATCAAAGGTCAGTTTTCTGT
TTCTTCCTTTTGGCCGCAGATTCATTCCGGCCTGGTAGAAGGAATCATTCGATTCAATTTTGCTAGAAACTGACTGACA-
---CCTTCTTCTCTTGTTTTGTTTCTAT--AGGAGTGAAGGAAGTGACGGTGGACGCGGCCAAGGACCTGGTGAAGGTGA
CTGGCACCATGGACGCAGCCGCCCTGCCGGGCTACCTCAGAGACAAGCTCAGTCGGCCTGTGGAGGTCGTCACCCCTGGC
AAGAAGGACGGCGACAAGAAAGACGACGGCGAGAAGAAGAAGGACAAGGG------AGCCGGCGACGGTGGCGAAAAGAA
GAAGGAC------GGCGGTGGCGAGGACAAGAAGGACAAGTCCGCGGCGTCCGTGGCGCCGATGCCCATGGCGGACCCGA
GCATGTACCAGATGCCCCCACAGTACGGCTACATGCCGTACCCCCCGGCGCCCGTCGGCTACTACGGCGCGGCGCCGCCG
CCGCCGAACCCGGGCTTCTACCCGAACGCCGGTCCCCAGTACCCGCCGCCCTACGCGACGTACCCCGCCCACGCGCCCCA
GATGTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTGAGC---------------CGCCACGGGCCGACGAGCAC
GACGCGAAGCCCAGGCTCGCCGTCGCAGCATCAACTGTCAAACCAGAGAAGCACGGCCTGGGCTTAGCGAGCGGTACCAT
TAGCCTAGCTAGCAGCA---AGTTACGTAGCTTAGCGCACCGAGAATTAGCAGACATGTAAATGGCGACAGCGATCCCGC
CCCGC----------AATGTAATGTTCCATGATCCATCCGATAAATTTTGGCCCTGCAC---------------------
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>chr1B_1_TraesCS1B01G157000
ACACAGCATGAGTGAAACCAACCCAGCGAGCGGCAGCCCAACATTTGGTGAAA---------GCGAGCGGGAAGGAATTA
CGCGGATGCACCCAAAGCC------ACCACCTATAATAAAGCGGGCCACGTGGTAGACCCATGCAGCCCATCATTCGTCC
ACTGCGGGCCCACTTACCGTCACTGCTCGCGTTCGGAATTCGAAACACTGAGGC--AAGCATTTGAAAATTTTGGTTCCC
AAACTGTGCAGCGACGAGGAGGA---------------GGACTCCGGAAGCTAGCCTCCTCCCGGATCGACGCCGCTTGG
CTTGGCTGCCCCGATTCCGCCTGTCT-----------CAAGCAACGGGCCGCCACCTGCTCAGCACTCACCACTAGTA--
-----------ACCTGAAACAGGCACGGGTTTGCAGTAAAAGATGGCAC-TACTTTTTTTGGTTTTTGCCCTGCCCTGCC
CTGCCCTGCCCTGCCAGTGAGTCGCAAAATCATCCAAACTCCTCCTACAGTAGTACCC------------ACTGCCAGAG
AATCAATATCGATCGAGACCTACTACTTTTCATGTTTTCCACCGTTGCAATCACCTCCTCACTCGGACAGCACAG-----
CACGCAGATATGTAGACCCGGCAGGTTCGCAGGAAGCAGCGTCTCTCCAGAGA------------AAATCAAACACAATG
CGCATGGCAGGCTGAATTAC----------AGTCTAGTCTACGGCTTGCTCCATTCCTAGTCATCAAGGGCCACGTGGAA
ATCGTAGTATGCAT-----GCAACGAAGCAGCCAGGAAGACGAAGAGGAA----------------------CACCCAGG
CTTAGCCGGGTCAGCCATCCCAGTCCCAGTCAGCAACCTCCCACCCGGGTCTCCACCCGA-----CCCGTTTCCCACCGA
TCCAGACCCGGCCGCCATTGCCACTCAAACTCTGCGCTCTCCTTCACTCCGCCCACCCACCTCACACAAGTTGTTGTAGT
TGTACGGTACTCTACTCCCGGCATCCCTCCTCC---------CTATTTAACACCGCCCCCACCCCACCTCTCCTGCCCCT
TCATTCCAAGCACAATACCACCTGCTCCTCTCCTCCAACCCACGC----GCCCGCGCCCACGCACGCACTAACTACCTCC
CTCCCCCGGAGCTCC---------------GTCAA---------------GCCATGGGCGAGGACAAGAAGGAGAAGCCG
GGCAAGGCAGACGGCGCCGACCACAACAAGGACGCCGCGGCGCCGCCCGAGCCCATCGTGCTCAAGGTCGACTTGCATTG
CGCCGGCTGCGCCACCAAGGTTAAGCGGGCCATCAAGAACGCCCCTGGTACGTCTGCTTCTTCCTTTCATTCATTTCCAT
TCCACCTCCTTAAATTACGGTTCCATTCTTTCTGCTACCACTGATTTCTTTCTCACCGTTTGCCT----TTGCTTCTCCG
CAGGCGTGGAGTCGGTTAAGACTGACACGGCGGCCAACAAGGTGGTCGTCACCGGCGCGGTGGACGCGGCGGAGATCAAA
CAGCGCATCGAGGCCAGGACCAAGAAGCCCGTTCAAATCGTCTCCGCCGGAGCCGCCTCGCCCAACAAGGACAACAAGGA
GAAAGGCAAGGACAACAAGGCGGACGCCGGCGATAAGCCGGAGAAAGAGAAGAGCAAGGCAGCAGAAAAGGAGAAGGGCG
GTGCCGGTGCCGGTGCTGAGAAAAAGGAGAAAAAAGTGGAAACCGCCGACAAGCCCAAGGAGGAGGAGAAGAAACCAAAG
GAGCCCAAAGAGGTTCGTCCCTGGGCTCGCTGACTACTGTAGAATTCAACTCTGTGATATGC---AGTTAGTTACTTGCA
G-------GTGTTGTAAATGAAGATTTGGTCTCAAATTCATCTTGCCATTTTTCCTTGATTCCATCAGGAGACCGTGACG
CTCAAGATCAGGCTGCACTGCGACGGCTGCATCGACCGCATCAAGCGCCGCGTCAACAAGATCAAAGGTCAGTTTTCTGT
TTCTTCCTTTTGGCCGCAGATTCATTCCGGCCTGGTAGAAGGAATCATTCGATTCAATTTTGCTAGAAACTGACTGACA-
---CCTTCTTCTCTTGTTTTGTTTCTAT--AGGAGTGAAGGAAGTGACGGTGGACGCGGCCAAGGACCTGGTGAAGGTGA
CTGGCACCATGGACGCAGCCGCCCTGCCGGGCTACCTCAGAGACAAGCTCAGTCGGCCTGTGGAGGTCGTCACCCCTGGC
AAGAAGGACGGCGACAAGAAAGACGACGGCGAGAAGAAGAAGGACAAGGG------AGCCGGCGACGGTGGCGAAAAGAA
GAAGGAC------GGCGGTGGCGAGGACAAGAAGGACAAGTCCGCGGCGTCCGTGGCGCCGATGCCCATGGCGGACCCGA
GCATGTACCAGATGCCCCCACAGTACGGCTACATGCCGTACCCCCCGGCGCCCGTCGGCTACTACGGCGCGGCGCCGCCG
CCGCCGAACCCGGGCTTCTACCCGAACGCCGGTCCCCAGTACCCGCCGCCCTACGCGACGTACCCCGCCCACGCGCCCCA
GATGTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTGAGC---------------CGCCACGGGCCGACGAGCAC
GACGCGAAGCCCAGGCTCGCCGTCGCAGCATCAACTGTCAAACCAGAGAAGCACGGCCTGGGCTTAGCGAGCGGTACCAT
TAGCCTAGCTAGCAGCA---AGTTACGTAGCTTAGCGCACCGAGAATTAGCAGACATGTAAATGGCGACAGCGATCCCGC
CCCGC----------AATGTAATGTTCCATGATCCATCCGATAAATTTTGGCCCTGCACTCGTTAATTATAACATAACAA
TCGTTGTTGTCATGGCCGTCATGAATCGGTGCTCCATTAACGGTTCCATGAACTGGTGGCGCGTCGCTGTTGCCTG----
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TGAGGTC
ATCGACGTTGATCAGTGGCAAC------GCCATTTTCGTCTTCCGGAGGGTTCGAGACGGCGCCTCTTGCGTCGGCCTTC
TTTTCTCGGCTCCAAGGGTTTGTTTTATCTCGATGGTTCGGGTCGTGAGTGCGGTGATCGATTAGCGTGAGACGAGGACG
TCTTGGATGTTTGCTTGCGGCACTGTCACGGCGTGT---TTTATTT-ATATGCGGTGCTAGCGTGGGATGGTGTGGCTAA
TTAATCATATCTCTACCCATTGTTTAGCGCTAATCAGGCTACGCAGT-------------------------GTGGCGAC
GTTGGTCTCTTCTCTGTGGAGTTCAGTGACGGGGATGTTCAAGTTATTTTAACTATATAGTACTATGTGTGTTTCATTTG
ACAG------CGCCAGCGTGGAGTATTCTAGTGCTTCTAGGCGGATTTGCAAGTAGGGATGGTGTTTTTTTTTTTTTTGA
GCAATCCGCACCCTTTTATTGAAGGTTCAAACATAATGGGATACAGATGATATCGGGCATAATGCTAAGCCACACATGGC
GCCCGGGACTAAGAGAAGCAGCTGCCCTTGCCAAGGCATGGGCCTCACCATTGTACTTTCTATTTTCATGAATAAAACTG
AGGTCACTGAAAAGCCTACTTTGATACTTTATATCCTGTAAGATAGGGTAGTATCCGCATGGAGCTTCCTCCCGTAAGTT
CGTTACAACCTCAAGGCAGTCAGTAGCAACACAAACGGACCGGAGATGAAGATCGGCAGCAAGTGAGAGAGCTTCGCTGC
ATGCTTCGGCTTCAAGGATTGTCGGATTGAGGCGGCCCTCATAGATGATCGCCGATGCTCCAATGTACTTGCCCCCCTTG
TCCCTGCATACAGCAGCTGAGGCAGCCCGGTCTCCTATCTTGGAAAAGCCGCCATCG
>chr1D_1
ACACAGCATGAGTGAAACCAACCCAGCGAGCGGCAGCCCAACATTTGGTCAAAGCGAGCAGCGCGAGCGGGAAGGAACTA
CGCGGATGCACCCAAAGCCGAAGCCACCACCTATAGTAAAGCGGGCCACGTGGTAGACCCATGCAGCCCATCATTCGTCC
ACTGCGGGCCCACTTAGCGTCACTGCTCGCGTTCGGAATTCAAAACACTCGGGGCAAAGCATTTGAAATTTTTGGTTCCC
AGAGTGTCCAGCGACGAGGGCGAGGAGTGTGCACACGTGGACCCCGGAAGCTAGCCTCCTCCCGGATCGACGCCGCTTGG
CTTGGCTGCCCCGATTCCGCCTGCATGCGAGGTGAAGCAAGCAACGGGCCGCCACCTGCTCGGCACCCAGCAGTAGTATT
TGTATGTGTCCACCTCAAACAGCCACGGGTTTGCAGTAAAAGACGGCACCTACTTTTTTGGGTTTTTGCACGGCGTAGGA
AACGGTG--CCTGCCAGTGACTCGCAGA---ATCCAAACCGCTCCTACAGTGAGTACGGTTCAACTATGGACTGCTAGAG
AACG----------GAGACCTACT-----------TTTCCACCGTTGCAATCACCTCCTCACTCCAACAGCACAGCACAG
CACGCAGATATGTAGACCCGGCAGGTTCGCAGGAAGCAGCATCAGCGTCGTCTCTCTCTCCGGAGAAATCAAACACAATG
CGCATGGCAGGCTGAATTACGCTCCGTCCTAGTTTAGTCTACGGTTCGCTCCGTTCCTAGTCATCAAGGGCCACGTGGAA
ATCGTAGTATGCATGCAACGCAACGAAGCAGCCAGGAAGACGAAGGGAAGAGCCACGCATTGACCGGCCATTCAGCCAGC
CTCAGCCGGGTCAG------CAGTCCCAGTCAGCAACCTTCTACCCGGGTCTACACCCGACCGGACCCGTTTCCCACCGA
TCCAGACCCGGCCGCCATTGCCACTCAAACTCTTCGCCCTTCTTCACTCCGCCCACCCACCTCACACAACTTGTTGCACT
TGTACGGTACTACTCTAC-----TCCCTCCTCCCGTAGTACTCTATTTAACACCGCCCCCACCCCACCTCTCCTGCTCCT
TCATTCCAAGC-----ACCACCTGCTCCTCTCCTCCAACCCACGC----GCCC------ACGCACGCACTAACTACCTCC
CTTCCCCGGAGCTCGGCGGAGAGACAAGAAGCCAAGCCACCGCTACGTACGCCATGGGCGAGGACAAGAAGGAGAAGCCG
GGCAAGGCAGACGGCGGCGACCAGAAGAAGGACGCCGCGGCGGCGGCCCAGCCCATCGTGCTCAAGGTCGACTTGCATTG
CGCCGGCTGCGCCACCAAGGTTAAGCGGGCCATCAAGAACGCCCCTGGTACGCCTGCCTCTTCCTTTCATTCACTTGGTC
TCCGCCTCC-----TTACGGTTCCATTCTTTGTGCTACGACTGATTTCT----GACCGTTTGCCT----TTGCTTCTCCG
TAGGCGTGGAGTCGGTTAAGACTGACACGGCGGCCAACAAGGTGGTCGTCACCGGCGCCGCGGACGCGGCGGAGATCAAA
GAGCGCATCGAGGCCAGGACCAAGAAGCCCGTTCAAATCGTCTCCGCCGGAGCCGCCTCGCCCAACAAGGACAACAAGGA
GAAAGACAAGGACAAGAAGCCCGACGCCGGCGATAAGCCGGAGAAAGAGAAGAGCAAGGCAGCAGACAAGGAGAAGGGCG
GTGCCGGTGCCGGTGCTGAGAAAAAAGAGAAAAAAGTGGAAACCGCCGACAAGCCCAAGGAGGAGGAGAAGAAACCAAAG
GAGCCCAAAGAGGTCCGTCCCTGGCTCGACG-----------------ACTCTGTTATATGGAGTAGTTAGTTACTTGCA
GCCTGCAGGTGCTCTAAATGAAGATTTGGTCTCAAATTCATCTTGCCCTTTTTCCTTGATTCTATCAGGAGACGGTGACG
CTCAAGATCAGGCTGCACTGCGACGGCTGCATCGACCGCATCAAGCGGCGCGTCAACAAGATCAAAGGTCGGTTTTCTGT
TTCTTCTTTTTGGCCGCAGATTCATTCCGGCCTGGAAGAAGGAATCATTCAGTTGAATCTTGCTGGAAACTGACTGACAC
CTTCCTTCTTCTCTTGTTTTGTTTCTACGCAGGAGTGAAGGAAGTGACGGTGGACGCTGCCAAGGACCTGGTGAAGGTGA
CTGGCACCATGGACGCAGCCGCCCTGCCGGGCTACCTCAGGGACAAGCTCAGTCGGCCGGTGGAGGTGGTCACCCCCGGC
AAGAAGGACGGCGACAAGAAAGACGACGGGGAGAAGAAGAAGGACAAGGG------CGCTGGCGAGGGCGGCGAAAAGAA
GAAGGACGGCGGTGGCGGCGGCGAGGACAAGAAGGACAAGTCCGCGGCGTCCGTGGCGCCGATGCCCATGGCGGACCCGA
GCATGTACCAGATGCCCCCACAGTACGGCTACATGCCGTACCCCCCGGCGCCCGTCGGCTACTACGGCCCCGCCGCCCCG
CCGCCGAACCCCGGCTTCTACCCGAACGCCGGGCCCCAGTACCCGCCGCCCTACGCGACGTACCCCGCCCACGCGCCCCA
GATGTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTGAGCAGCCACGCCACGCCACGCCACGAGCCGACGAGCAC
GACGCGAAGCCCAGGCTCGCTGCCGCAGCATCAGTTATCAAACCAGAGAAGCACGGCCTGGGCTTAGCGCGCGGTACCAT
TAGCCTAGCTAGCAGCTGGTAGTTACGTAGCTTAGCGCACCGAGAATTAGCAGACATGTAAATGGCGACAGCGATCCCGT
CCCGCGATGT----TAATGTAATGTTCCACGATCCATCCGACAAATTTTGGCCCTGCACTCGTTAATTATT-----ACAG
TCGTTGTTGTCATGGCCGCCATGAATCGGTGCTCCATTAACGGTTCCGTGAACTGGTGGCGCGTCGCTGTTGCCTG----
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-------------------------------------------------------------------------TGAGGTC
ATCGACGTTGATCAGTGGCAATGGCAATGCCATTTTCGTCTTCCGGAGGGTTCGAGACGGCGCCTCTTGCGTCGGCCTTC
TTTCTTCGGCCCCAAGGGTTTGTTTTATCTCGATGGTTCGGGTCGTCAGTGCGGTAATCGATTAGCGTGAGACGAGGACG
TCTTGGATGTTTGCTTGCGGCACTGTCACGGCGTGT---TTTATTTTATATGCGGTGCTAGCGTGAGATGGTGTGGCTAA
TTAATCATATCTCTGTCCATTGTTTAGCGCTGATCCGCCCTGTCATGTTCTTGCGTGGTATCAAGCTACGCAGTGGCGAC
GTTGGTCTCTTCTCTGTGGAGTTCAGTGACAGGGATGTTCAAGTTATTTTAACCATAC--------GTGTGTTTCATCTG
ACAG------CGCCACCGTGGAGTATTCTAGTGCTTGTAGGCGGATTTGCTAGTAGGGATGGTGTTTT------------
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>chr1A_936
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-----------------------TCCTTCCTTC---------CTATTTAACACCGCGCCCGCCCCACCTCTCCTGCCCCT
TCATTCCAAGC-----ACCACGTGCTCCTCTCCTCCAACCCACGCCCACGCCC------ACGCACTACCTCCCTCCCTCC
CTCCCCCGGAGCTCC---------------GCCAAGCCACCGCAC----CGCCATGGGCGAGGACAAGAAGGAGAAGCCG
GGCAAGGCTGACGGCGGCGACCACAAGAAGGACGCCGCGGCGCCGCGCCAGCCCATCGTGCTCAAGGTCGACTTGCATTG
CGCCGGCTGCGCCACCAAGGTTAAGCGGGCCATCAAGAACGCCCCTGGTACGCCTGCTTCTTTCTTTCAT----------
-----CTCC-----TTACGGTTCCCTTCTCTGTAGGACTAGTGTAA--TTTCTGACCGTTTGCCTTAATTTGGTTCTCTG
CAGGCGTGGAGTCGGTTAAGACTGAGACGGCGGCAAACAAGGTGGTCGTCACCGGCGCGGCGGACGCGGCCGAGATCAAG
GAGCGCATCGAGGCCAGGACCAAGAAGCCCGTTCAAATCGTCTCCGCCGGAGCCGCATCGCCCAACAAGGACAACAGGGA
CAAGGACAAGGACAACAAGGCCGGCGCCGGCGATAAGCCGGAGAAAGAGAAGAGCAAGGCAGCAGACAAGGAGAAGGGCG
GTGGCGGTGCCGGTGCTGAGAAAAAAGAGAAAAAGGTGGAAGCCGCCGACAAGCCCAAGGAGGAGGAGAAGAAACCAAAG
GAGCCCAAAGAGGTTCGTCCCTGGGC--------TACTGTAGAATTCAACTCTGTGATATGC---AGTTAGTTACTTGCA
G-------GTGTTGTAAATGAAGATTTGGTCTCATATTCATCTTGCCCTTTTTCCTTGATTCCATCAGGAGACCGTGACG
CTCAAGATCAGGCTGCACTGCGACGGCTGCATCGACCGCATCAAGCGCCGCGTCAACAAGATCAAAGGTCAGTTTTCTGT
TTCTTCCTTTTGGCCGCAGATTCATTCCGACCTGGTACAAGGAATCATTTAGTTGGATCTTGCTGGAAACTGACTGACA-
---CCTTCTTCTCTTGTTTTGTTTCTACGCAGGAGTGAAGGAAGTGACGGTGGACGCTGCCAAGGACCTGGTGAAGGTGA
CTGGCACCATGGACACAGCCGCCCTGCCGGGCTACCTCAGGGACAAGCTCAGTCGGCCGGTGGAGGTGGTCACCCCCGGC
AAGAAGGACGGCGACAAGGAAGACGACGGCGAGAAGAAGAAGGACAAGGGCGCTGGCGCTGGCGATGGCGGCGAAAAGAA
G---GACGGCGGTGGCGGCGGCGAGGACAAGAAGGACAAGTCCGCGGCGTCCGTGGCGCCGATGCCCATGGCGGACCCGA
GCATGTACCAGATGCCCCCACAGTACGGCTACATGCCGTACCCCCCGGCGCCCGTCGGCTACTACGGCGCGGCGCCGCCG
CCGCCGAACCCCGGCTTCTACCCGAACGCCGGGCCCCAGTACCCGTCGCCCTACGCGACGTACCCCGCCCACGCGCCCCA
GATGTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTGAGCTGCCATGCCACGCCACGCCACGAGCCGATGAGCAC
GACGCCAAGCCCAGAGTCGCCGCAAGCAGTATGA--ATCAAACCAGAGAAGCACGGCCTGGGTTTGGCGCGCGGTACCAT
TAGCCTAGCTAGCAGCTGGTAGTTACGTAGCTTAGCGCACCGAGAATTAGCAGACATGTACATGGCGACAGCGATCCCGT
CCCGCGATGTAATGTAATGTAATGTTCCACGATCCATCCGATAAATTTTGGCCCTGCACTCGTTAATTATAACA-AACAA
TCGTTGTTGTCATGGCCAGCATGAATCGGTGCTCCATTAACGGTTCCATGAACTGGTGGCGCGTCACTGTTGCCCGTGAG
AGCATCTGCTACAGTTTATATGTTAGCTTGTTGGTAAAATATGCCATGTCATCAAACAATATCTTAACATACAACATTTC
AAATAGGTTGTATTTAGTATGCCCAATAAGATGTGAGATAATAAATAAGGTGCTCTTTCATTCTACATTGAAGCTTGTGT
AATGGGTGTTGGTTTATTACATACAACATTTCTCTCTTTCCTCATTTATTGCATGACACATCATCAAAAATTCTATGTGA
TAAAGTCTACCAACAACTATCTTATAATCATTGAAGATCCCCTGAGGTCATCGACGTTTTCTTTTTTCTTTTTTGAGGTC
ATCGACGTTGATCAGTGGCAATG------CCATTTTCGTCTTCCGGGGGGTTCGAGACGGCGCCTCTTGCGTCGGCCATC
TTTTTGCGGCTCGAAGGGTTTGTTTTATCTCGATGGTTCGGGTCGTCAGTGCGGTGATCGATTAGCGTGAGACGACGACG
TCTTGGATGTTTGCTTGCGGCAGTGTCACGGCGTGTGTGTTTATTT-ATATGCGCTGCTAGTGTGGGATGGTGTGGCTAA
TTAATCATATCTCTACCCATTGTTTAGCGCTAATCCGTCTTGTCCTGTTCTTGCGTGGTGTCAAGCTACGCAGTGGAGAC
GTTGGTCTCTTCTCCGTGGAGTTCAGTGACGGGGATGCTCAAGTTATTTTAACCATATAGTA-----TGTGTTTCATCTG
ACTGACAGCCCGCCACCGTGGAGTATTCTAGTGCTTGTAGGCGGGTTTGCAAGTAGGGATGGTGTTTTT-----------
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>SNPs
-------------------------------------------------S---------------------------S--
-----------------------------------S--------------------------------------------
----------------S------------------------S-------SS--S--------------S-----------
-S-S---S-----------SS---------------------S-------------------------------------
-----------------------SS------------------------------------S----S--S--S-------
---------------S------S--------------------S---------------S---------S-S--SSS-SS
SSSSSSSSS-----------S-----S-SSS--------SS----------SSSSS-S-----------------S----
--SSSSSSSSSSSS----------SSSSSSSSSSS-----------------------------SS--------------
----------------------------------------S--SSSSSS-SSS---------------------------
---------------------------------S----------S-S-----S---------------------------
---------------------------------------------S-S-S------------------------S----S
--S-----------SSSSSS-------------------S-S----------S---------------------------
---------------------------------S---S--S----------------------------S------S-S-
-----------SSS--S-SSSSS---------------------------------------------------------
-----------SSSSS-------------------------------------SSSSSS---------------------
-------------------------------S------------------------------------------------
----------------S---------S---------------------S-------------------------------
----------------------------------------------------S--------------------S--SSSS
---S-----SSSSS-----------------S------S--------------S--------------------------
------------------------------------------------------------S-------------------
S-------------------------------------------------------------------------------
-----S---------------S--------------------------------------------S-------------
-------------------------S------------------------------------------------------
--------------------------SSS-SSSS----------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SS--S---S-----S---------------
---------------------------S-----------------------------S----------------------
----------------------------------------S-----------------S--------S--------S---
--------------------------------------------------------S--S-----S--S-----------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------S-----------------------------------------------
-------------------------------------------------------------------S------------
----------------------S-----------S-S--------------------------------S----------
----------------S--------------------------------------------------------------S
-----------------------------S--------------------------------------------S-----
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
----S-----------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-S--SSS--SS---------------------------------
-----------------------------------------------------S--------SSSS-----------S--
---------------S--------------------S--------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_880
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------------------------------------------------------------GACGAAGAGGAACACCCAGG
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>reverse_2386
--------------------------------------------------------------------------------
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-----------------------------------------------------------------CGGTGGCGAAAAGAA
GAAGG---------------------------------------------------------------------------
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>forward_1786
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------GTGCCGGTGCTGAGAAAAAG------------------------------------------------------
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>reverse_4046
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---------------------------------------------GGGTAGTATCCGCATGGAGC---------------
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