>input_sequence_44914
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-----------------------------------------------ATGGAGGGC---------TGTGCCTGCATCGAG
CAGTTCCGGCGAACTGACGAGCTCCTCATCAAGTACCAGTACATCTCGGACTTCTTCATAGCCCTCGCCTACTTCTCCAT
CCCACTCGAGCTGATCTACTTCGCCAAG---TCGGCATCCTTCCCCTACAGATGGGTGCTCCTCCAGTTCAGCGCCTTCA
TAGTCCTCTGTGGGGCCACCCACCTCATAAACCTCTGGACCTTCACCAAGCACACCAGGACCGTCGACATCGTCATGACG
GTAACCAAGGTCACCACGGCCGTCGTGTCCTGCGCGACGGCCCTCACGCTCATCCATATCATACCTGATTTGTTGGGTGT
CAAGACGAGGGAGTTGTTCCTCAAGAA---GGCCGACAAGCTCGACAGGGAGTTGAGCCTCATGCGATCGCAGGAGGAGA
CCGGGAGGCATGTCAGGATGCTCATCCATGAGATCAGGAGCACGCTTGACAGGCACACCATCCTCAAGACTACTCTGGTT
GAGCTCGGGAGGACGCTGGGTCTGCAGGAATGTGCTTTCTGGATGCCGTCGAGGAGCGGTTCGAGCCTTGAGCTAACTCA
TACCATGCGCCACCACATCCCCACGGGCTCTTCTGTGGAGATTAATCTCCCTGTTGTCAACCAAGTCTTCAGTACCAACC
GGGCTATTATAGTGCCACATACATCTCCTTTTGCGAGGATCCACCCTGTTCAAGGGCGGCATGTCCCACCCGAGGTGGCT
GCTGTGAGAGTCCCGTTGCTGCATCTTCCAAACTTTCAT------------CCTGAGCTTTTGGCAAAAAGCTACGCAAT
TATGGTTTTGATGCTCCCATCTGATAGTGCAAGGAAGTGGCTTGCTCATGAACTCGAGCTCATCGAGGTTGTCGCCGATC
AGGTTGCTACTACACTTTCCCCTGATATT-TTTAGAACACCATTTGTCTTGAGTTAATTTAAAAAAAACCTCTTCAAAGT
AGAATAATCAATAATTTAATGTTTGTTCACTGCTGCACACTGAATAAATGATATGTGAAAACTGCAAACAACAAGAAATA
GCTAGCTATACACCGGTGTAGTGCATGAAACCATATGCAAGTCTTGAACACTTTGTACACATCTTGAATGGAGTGGAATG
CAGGTTAGCATGCTCCCTGCGACAACCATGTTTGTTGGTTAGGTATATGGTGTTATTTCATAATTTGCTTAGAGGA----
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TAT
ATCATATATGTTCAACTTCTGATGCAGGTTAAGTCAAGCATAAGTTATTTCCTTAGCTTGGGTACTGTAAGCTTAAATTT
ATTTATAACTACATAAATTAGCACTGTGTTCAAGCTACACATCAGTAAAAAGAGGAAAGGAATGCAACAGTACAATATTA
GGAAAGATGTGTAGTTAATAA-TTTTTCTGATGAACATAAATCAACCTTCTCTGTAGTTTTTCTTTTTCTGTTTTTCAGT
CGAAAAGCCATGTCAAAGA------GTTCTAACAGTGTGCTCCTCTGAATAACTGCTACCGGCACTTTGTTTTCTTTTAA
ATGGACCTGGGCGTTAAGCCC------------------AGTCCTACAAAAGGACATTCACAAAAACTTACCTATATAT-
TGATATACATGGTGTATTAGCATGCATTCTGCATGGATTAGAAAAAAACTAGGATTCTACAACTTTTTTAATGAGATCAT
ATATGGTACTCTTCTCAGGTAGCTGTTGCCC--TCTCATGCGGCAATTCTTGA---------------------------
--------------------------------------------------------------------------------
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----------------
>chr4A_1_TraesCS4A01G344200
AAGGGGAAGGTTGGACGAAGGAGTAATGGGAAGGAAAGTGAAAGATGAAACCTTACATTTTTTTAAGTAAGTAGATATAG
AGATGGAGATAGAGATATATAGATATAGATATATAGATAGTGTTATAGATATAGATATAGACAAATATAGATATAGATAC
AGATATAGATATAGGTGTAGATATAGATGTAGATATAGATATAGATATAGATTGCTAGGCACTTTTCATTTGTATATATA
TATAAGAGGAAGAAAGTAATATGTGTGTTGTCTTCTGGGCTGGTTCTGGTTCATCGCCCTTGCCCT--CCTCTCTTTCCC
TCCCTCCTTCCTTTACGCCCTCTCCATCTAGCTGCTGTCGCCACGCCACCACCGTGCCGCGCCCAACATCAACTCCGGTG
CTTGCCCCACAAGCAGGTACCATGTTCTTCTCGTCCTCGTCTCTACTACGGCAGACAGTGCAGTCTCTCTTGCTCCATGC
TGCATCCATCGACCATGGTTTAGGTCTGGCAGCGATCTCTCTCATGGGTTACCCAGATCTGAAAACCAGGCTGCAGCTGG
GATCCCGGAAATATTTGACATGCTAAGCTTACTCGCGACTTTACTTGATATGGATATGTTAAGCAGGACCCCTACTCTTT
TGTGGAAATTGAAATGCCGCATCTAGTTTGAGAATAGCTATTTAGGCTGCTTCATTCCACATCTAGTTTGCTTCACCCTA
GGACACTTGGCTACTTAGATTTTTACAAATCTCTGCTCAACGTGCATCAGTTCATACACCTACCACATACTACCATGGAA
GTACCTGAATTTATGTTCTTTATACTTGTTTTTCTTCAATTAATGAATCTGACTTGCTTGATTACTCAAAAATTCTAGTA
TCTTATTCTCACACTCGGACTGATTTTCGATTAATCTTCTTCAGGGAACAAGTGCAGGCCAGGAAGACAAGTAGACAACA
ACGACACTCTATAGTTAGGCATCCAGGCTCCAGATTAACT-----AAATGGAGGGC---------TGTGCCTGCATCGAG
CAGTTCCGGCGAACTGACGAGCTCCTCATCAAGTACCAGTACATCTCGGACTTCTTCATAGCCCTCGCCTACTTCTCCAT
CCCACTCGAGCTGATCTACTTCGCCAAG---TCGGCATCCTTCCCCTACAGATGGGTGCTCCTCCAGTTCAGCGCCTTCA
TAGTCCTCTGTGGGGCCACCCACCTCATAAACCTCTGGACCTTCACCAAGCACACCAGGACCGTCGACATCGTCATGACG
GTAACCAAGGTCACCACGGCCGTCGTGTCCTGCGCGACGGCCCTCACGCTCATCCATATCATACCTGATTTGTTGGGTGT
CAAGACGAGGGAGTTGTTCCTCAAGAA---GGCCGACAAGCTCGACAGGGAGTTGAGCCTCATGCGATCGCAGGAGGAGA
CCGGGAGGCATGTCAGGATGCTCATCCATGAGATCAGGAGCACGCTTGACAGGCACACCATCCTCAAGACTACTCTGGTT
GAGCTCGGGAGGACGCTGGGTCTGCAGGAATGTGCTTTCTGGATGCCGTCGAGGAGCGGTTCGAGCCTTGAGCTAACTCA
TACCATGCGCCACCACATCCCCACGGGCTCTTCTGTGGAGATTAATCTCCCTGTTGTCAACCAAGTCTTCAGTACCAACC
GGGCTATTATAGTGCCACATACATCTCCTTTTGCGAGGATCCACCCTGTTCAAGGGCGGCATGTCCCACCCGAGGTGGCT
GCTGTGAGAGTCCCGTTGCTGCATCTTCCAAACTTTCAT------------CCTGAGCTTTTGGCAAAAAGCTACGCAAT
TATGGTTTTGATGCTCCCATCTGATAGTGCAAGGAAGTGGCTTGCTCATGAACTCGAGCTCATCGAGGTTGTCGCCGATC
AGGTTGCTACTACACTTTCCCCTGATATT-TTTAGAACACCATTTGTCTTGAGTTAATTTAAAAAAAACCTCTTCAAAGT
AGAATAATCAATAATTTAATGTTTGTTCACTGCTGCACACTGAATAAATGATATGTGAAAACTGCAAACAACAAGAAATA
GCTAGCTATACACCGGTGTAGTGCATGAAACCATATGCAAGTCTTGAACACTTTGTACACATCTTGAATGGAGTGGAATG
CAGGTTAGCATGCTCCCTGCGACAACCATGTTTGTTGGTTAGGTATATGGTGTTATTTCATAATTTGCTTAGAGGA----
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TAT
ATCATATATGTTCAACTTCTGATGCAGGTTAAGTCAAGCATAAGTTATTTCCTTAGCTTGGGTACTGTAAGCTTAAATTT
ATTTATAACTACATAAATTAGCACTGTGTTCAAGCTACACATCAGTAAAAAGAGGAAAGGAATGCAACAGTACAATATTA
GGAAAGATGTGTAGTTAATAA-TTTTTCTGATGAACATAAATCAACCTTCTCTGTAGTTTTTCTTTTTCTGTTTTTCAGT
CGAAAAGCCATGTCAAAGA------GTTCTAACAGTGTGCTCCTCTGAATAACTGCTACCGGCACTTTGTTTTCTTTTAA
ATGGACCTGGGCGTTAAGCCC------------------AGTCCTACAAAAGGACATTCACAAAAACTTACCTATATAT-
TGATATACATGGTGTATTAGCATGCATTCTGCATGGATTAGAAAAAAACTAGGATTCTACAACTTTTTTAATGAGATCAT
ATATGGTACTCTTCTCAGGTAGCTGTTGCCC--TCTCATGCGGCAATTCTTGAAGAATCAATGTGAGCACGTGATCTACT
GACGGAGCAAAATGTCGCCCTGGATTTAGCTCTGCGAGAGGCTGAAATGGCAATACATGCTCGCGATGTCAACAGGGTGG
GGGTTGAACTTGTGGGGCCTGAGGACGCAGACAACCTCGCTACCATCGACTCATCTGCTTCTGCAGCCAAGGTGCACAAC
GCCAAGCCATGATCGACGAGTCTGCCCCAACTTCGCCCGACACC--GATGCGTCACTTCTACCCACCAAGAAGTACTCCT
TGATCCAAATCCTACTCTCTATTTGCCTTTGCTTGCACCCTATAGGTGCCCCAAAGTCCCAAACTGTTTCCTTTGCTGCT
GCTGCGACAGCACTATCTATCTGAACCTATGTAGTTTAAATTTGGCCCTGCTGTGTGCAATCTATCTGGATTTGTGCTAA
GTTATGCTATTTGTCTAGAAACGTGTGCTTAATTACCTTGTGGTGCATCTCGGTGCCGATGGCGAACACAATGCTATC-T
TGATCTCTTGGTATGTTCGTGAAAACTGCAAACAGCAAGAAATAGCTAGCTATACACTCCTGTAGTGCATGAAACCATAT
GCAAGTCTAGAACACTTTTGTAGTTCTCAATTTACAAAAATGTTTGGAATTTCGAAATTTATTCATCGCTTCAAAAAATG
TTTTTGGAGTTTTCTTCATGTTCTGAAAAACGTTCGGAATTTATAGTTTTGTTCACATTTTTAAAAATTGTTTGCATTGT
TAAAAAATGTTCGAAATTTCCAAAGAAAATCATGCAGAAAAATAACTGGAGTTACGAAATTTTGTTCGCATTTTCAGAAA
ATGTTCACATTTTCAAAAAAATGCTCTCACTTCTAAATTTTGTTTGTGTTCTGAAAATAGTTTACAATATTAGATTTTGT
TAATTTTTATAAACAAAATGTTCTGAATTTATAAATTTGTTCGTTTTTTAAAAAAGTCTGGAGGTTCAAATTTTGTGTGT
TTTTCGAAATTTGTTC
>chr5B_106
TAGATATAGAGGTGGAGATAGAGAGATATAGATAGAGAT-----------------------------------------
------------------------------ATATAGATAGTGTTAT-------------------------TATAGATAT
AGATATAGATATAGGTGTAGATATAGAT------------ATCGATATAGATGGCTAGGCACTCTTCATTTGTATATAAG
C------GGAAGAAAGTAATATGTGTGTTGTCTTCTGGGCTGGTTCTGGTTCGTCGCCCTTTTGCCAACCTCTCCTTCCC
TCCCTCCTTCCTTTACCCCCTCTCCATCTAGCTGCCGTCGCCACGCCACCGCCCTGCCGCACCCAACACCAACTCCGGTG
CTCGCCCCACAAGCAGGTACCATGTTCTTCTTGTCCTCGTCTCTACTACTGCAGACAGTGCAGTCTCTCTTGCTCCATGC
TGCATCCATCGACCATGGTTTAGGTCTGGCAGCGATCTCTCTCATGGGTTACCCAGATCTGAAAACCAGGCTGCAGCCGC
GATCCCGGAAATATTTGACATGCTAAGCTTACTCGCGACTTTATGTT---------------------------------
--------------------------------------------------------------------------------
-------------------------CATATCTCTGCTCAACGGGTATCAGTTCATACACCTACCACATACTACCTTGGAA
GTACCTGAATTTATGTTCTTTATACTTGTTTTTCTTCAATTAATGAATCTGACTTGCTTGATTACTCAAAAATTCTAGTA
CCTTATTCTCACACTCGGACTGATTTTCGATTAATCTTCTTCAGGGAACAAGTACAGGCCAGGAAGACAAGTAAACAACA
ACGACACTCTATAGTTAGGCATCCAGGCTCCAGATTAACT-----AAATGGAGGGC---------TGTGCCTGCATCGAG
CAGTTCCGGCGAACTGACGAGCTCCTCATCAAGTACCAGTACATCTCGGACTTCTTCATAGCCCTCGCCTACTTCTCCAT
CCCACTCGAGCTGATCTACTTCGCCAAGAAGTCGGCATCCTTCCCCTACAGATGGATGCTCCTCCAGTTCAGCGCCTTCA
TTGTCCTCTGCGGGGCCACCCACCTCATAAACCTCTGGACCTTCACCAAGCACACCCAGACCGTCGACATCGTCATGACG
GTAACCAAGGTCACCACGGCCGTCGTTTCCTGCGCGACGGCCCTCACGCTCATCCATATCATACCTGATTTGTTGGGTGT
CAAGACGAGGGAGTTGTTCCTCAAGAAGAAGGCCGACGAGCTCGACAGGGAGATGAGCCTCATGCGGTCGCAGGAGGACA
CCGGGAGGCATGTCAGGATGCTCATCCATGAGATCAGGAGCACGCTTGACAGGCACACCATCCTCAAGACTACTCTGGTT
GAGCTCGGGAGGACGCTGGGTCTGGAGGAATGTGCTTTCTGGATGCCGTCGAGGAGCGGTTCGAGCCTTGAGCTAACTCA
TACCATGCGCCACCACATCCCCACGGGCTCTTCTGTGGAGATTAATCTCCCTGTTGTCAACCAAGTCTTAAGTACCAACC
GTGCGATCATAGTGCCACATACTTCTCCTTTGGCGAGGATCCACCCTGTTCAAGGGCGGCATGTCCCACCCGAGGTGGCT
GCTGTGAGAGTTCCTCTGCTGCATCTTTCAAACTTTCAT------------CCCGAGCTTTTGGCGAAAAGCTACACAAT
TATGGTTTTGATGCTCCCATCTGATAGTGTGAGGAAATGGCTTGCTCATGAACTCGAGCTCATCGAGGTCGTCGCCAATC
AGGTTGCTACTACACTTTCCCCTGATTTTCTTAAGAGCACCATTTGTCTTGTTGATT----AAAAAAACATCTCCATAGC
AGAATAATCAATAATATAAAGTTTGTTCACAGCTGCACGATGAATAATTGATATGTGAAAATTGCAAATAACAAGAAATA
GCTATCTATACACCGGTGTAGTGCATGAAACCATATGCAAGTCTAGAACACTTTGTACACATCTTCAATGAATTGGAATG
TAGGTTAGCTTGCTCCCTGCGATAACCATGTTTGTTGGTTAGGTATATGGTGTTATTTCATAATTTGCTTAGAGTATACT
CCCTCCGTTCCTAAATGTAAGTCTTTGTAGAGATTTCACTGTAAACCGCGTACAGATGTATATGGATGCATTTTAAGTTT
AGATTCATTCATTTTGCTCTATATGTAGTCCACCTAGTGGAATCTCTATAGAGACTTATATTTAGGAACGGAGGGAGTAT
ATCATATATGTTCAATTTCTGACACAGGTTAAGTCAAGCATAAGTTATTTCCTTAGCTTGGGTACTGTAAGCTTAAATTT
ATTTATGATTACATAAATTAGCACTGTGTCCGAGCTACACATCAGTAAAAAGAGGAAAGGAATGCAACAGTACAATATTA
GGAAAGATGTGTAGTTAATATTTTTTTCTGATGAACATAAATCAACCTTCTCTGTAGTCATTCTTTTTCTGTTTTTCAGT
CGAAAACCCATGTTAAAGATGTGTAGTTCTAACAGTG----------------------------------TTCTTTTAA
ATGAAACTGGGCGTTGCCTTTCTATCTGAAAAAAAGGTAAGTCCTAGAAAAGGACATTCACAAAAACTTACCTATATATT
TGATATACATGGTGTACTAGCATTCCACATGGGTT------AAAAGAACTAGCATTCTACAATCTCTTAC-TGAGATCAT
ATATGGTACTCTCTTCAGGTAGCTGTTGCCCTCTCTCAAGCGGAAATTCTTGAAGAATCAATGCGAGCACGTGATCTACT
GACGGAGCAAAATGTCGCCCTGGATTTAGCTCTGCGGGAGGCTGAAATGGCAATACATGCTCGCAATGTCAACAGGGTGG
GGGTTGAACTTGTGGGGCCTGAGGACGCAGACAACGTCGCTACCATCAACTCATCTGCTTCTGCAGCCAAGGTGCACAAC
ACCGAGCCATGATCGACGCGTCTACCCCAACTTCGCCCGACACTGAGATGCGTCACTTCTACCCACCAAGAAGTACGCCT
TGATCCAAATCGTACTCTCTAGTTGCCTTTGCTTGCACCCTATAGGTGCCCCAAAGGCCCAAACCGTTTCCTTTGCTGCT
GCTGCGACAGCACTATCTATCTGAACCTATGTAGTTTAAATTTGGCCCTGCTGTGTGCAATCTATCTGGATTTGTGCTAA
GTTATGCTATTTATCT--AAACGTGTGCTTACCTTA----TGGTGCATCTCGGTGCCGATGGCGAACACAATGCTATCCT
TGATCCCTTGGTATGTTCGTGAAAACTGCAAACAGCAAGAAATAGCTAGCTATACACTCCCGTAGTGCATGGAACCATAT
GCAAGTCTAGAACACTTTTG------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>chr5B_952
GACGA---CAACG-------------------------------------------------------------------
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-----ACTCTCTAGCTAGGCATCAAGCCTCCAGATTAACTACCTAAAATGGAGGGC---------TGTGACTGCATCGAG
CCGTGCTGGCCGACCGACGAGCTCCTCATCAAGTACCAGTACATCTCGGACTTCTTCATAGCGCTCGCCTACTTCTCCAT
CCCGCTCGAGCTCATCTACTTCGTCAAGAAGTCGTCATTCTTCCCCTACCGATGGGTCCTCATCCAGTTCGGCGCCTTCA
TCGTCCTCTGTGGGGCCACCCACCTCATAAACCTCTGGACCTTCACCATGCACACCAAGACCGTCGCCATCGTCATGACT
GTGGCCAAGGTCTCCACGGCCGTCGTGTCCTGCGCGACCGCCCTCATGCTCGTTCACATCATACCCGATTTGTTGAGCGT
CAAGACAAGAGAGCTGTTTCTCAAGAAGAAGGCCGACGAGCTTGACAGGGAAATGGGACTGATACGCACGCAGGAGGAGA
CGGGGAGGCATGTCAGAATGCTCACCCATGAGATCAGGAGCACGCTTGACAGGCACACCATCTTGATGACTACTCTGGTT
GAGCTAGGGAGGACGTTGGGTCTGGAGGAATGTGCCTTGTGGATGCCATCACGGAGCGGTTCGAGCCTTCAGCTAACTCA
TACTCTGCGCCACCCGATCCCGGGTGGCTCGTCTGTGCAGATCAATCTTCCTGTTGTCAACCAAGTTTTCAGTAGCAACC
GGGCGATCATCGTGCCGCATACGTCTCCGTTGGCAAGGATCCGCCCTGTTCAAGGCCGGTATGTCCCACCGGAGGTGGCT
GCTGTGAGAGTCCCCCTGCTGCACCTTTCAAACTTCCAGATAAATGACTGGCCCGAGCTTTCGGCGAAAAGCTACGCGAT
TATGGTTTTGATGCTCCCGTCTGATAGTGCGAGGAAATGGCATGTTCATGAACTGGAGCTTGTCGAGGTCGTCGCCGATC
AGGTTCGTACTACACTTTCCCCTGATTATTTTCAG---------------------------------------------
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>chr5A_952
GACGA---CAACG-------------------------------------------------------------------
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-----ACTCTCTAGCTAGACATCAAGCCTCCAGATTAACTA-CTAAAATGGAGGGC---------TGTGACTGCATCGAG
CCGTTCTGGCCGACCGACGAGCTCCTCATCAAGTACCAGTACATCTCAGACTTCTTCATAGCCCTCGCCTACTTCTCCAT
CCCACTCGAGCTCATCTACTTCGTCAAGAAGTCGTCATTCTTCCCCTACCGATGGGTGCTCATCCAGTTCGGCGCCTTCA
TCGTCCTCTGTGGGGCCACCCACCTCATAAACCTCTGGACCTTCACCATGCACACCAAGACCGTCGCCATCGTCATGACC
GTCGCCAAGGTCTCCACGGCCGTCGTGTCCTGTGCGACCGCCCTCATGCTAGTTCATATCATACCCGACCTGCTCAGCGT
CAAGACGAGGGAGCTGTTTCTCAAGAAGAAGGCCGACGAGCTTGACAGGGAAATGGGACTGATACGCACGCAGGAGGAGA
CGGGGAGGCATGTCAGAATGCTCACCCATGAGATCAGGAGCACGCTTGACAGGCACACCATCTTGAAGACTACTCTGGTT
GAGCTCGGGAGGACGCTGGGTCTGGAGGAATGTGCCTTGTGGATGCCATCACGGAGCGGTTCTAGCCTTCAGCTAACTCA
TACTCTGCGCCACCCGATCCCGGGTGGCTCGTCTGTGCAGATCAATCTTCCTGTTGTCAATCAAGTCTTCAGTAGCAACC
GGGCGATCATTGTGCCGCATACGTCTCCGTTGGCAAGGATCCGCCCTGTTCAAGGCCGGTATGTCCCACCGGAGGTGGCT
GCTGTGAGAGTCCCCCTGCTGCACCTTTCAAACTTCCAGATAAATGACTGGCCCGAGCTTTCGGCGAAAAGCTACGCGAT
TATGGTTTTGATGCTCCCGTCTGATAGCGCGAGGAAATGGCATGTCCATGAACTGGAGCTCGTCGAGGTCGTCGCCGATC
AGGTTGCTACTACACTTTCCCTGAT-------------------------------------------------------
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>chr5D_952
GACGA---CAACG-------------------------------------------------------------------
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-----ACTCTCTAGCTAGATATCAAGCCTCCAGATTAACTA-CTAAAATGGAGGGC---------TGTGACTGCATCGAG
CCGTTCTGGCCAACCGACGAGCTCCTCATCAAGTACCAGTATATCTCGGACTTCTTCATAGCCCTCGCTTACTTCTCCAT
TCCGCTCGAGCTCATCTACTTCGTCAAGAAGTCATCATTCTTCCCCTACCGATGGGTCCTCATCCAGTTCGGCGCCTTCA
TCGTCCTCTGCGGGGCCACCCACCTCATAAACCTATGGACCTTCACCATGCACACCAAGACCGTCGCCATCGTCATGACC
GTGGCCAAGGTCTCCACGGCCGTCGTGTCCTGCGCGACCGCCCTCATGCTCGTTCATATCATACCCGACCTTCTCAGCGT
CAAGACAAGGGAGCTGTTTCTCAAGAAGAAGGCCGACGAGCTTGACAGGGAAATGGGACTGATACGCACGCAGGAGGAGA
CGGGGAGGCATGTCAGGATGCTCACCCATGAGATCAGGAGCACGCTTGACAGGCACACCATCCTAAAGACTACTCTGGTT
GAGCTAGGGAGGACGTTGGGTCTGGAGGAATGTGCCTTGTGGATGCCATCACGGAGCGGTTCGAGCCTTCAGCTAACTCA
TACTCTGCGCCACCCGATCCCGGGTGGCTCGTCTGTGCAGATCAATCTTCCTGTTGTCAACCAAGTCTTCAGTAGCAACC
GTGCGATCATCGTGCCGCATACGTCTCCGTTGGCAAGGATCCGCCCTGTTCAAGGCCGGTATGTCCCACCGGAGGTGGCT
GCTGTGAGAGTCCCCCTGCTGCACCTTTCAAACTTCCAGATAAATGACTGGCCCGAGCTTTCGGCGAAAAGCTACGCGAT
TATGGTTTTGATGCTACCGTCTGATAGCGCGAGGAAATGGCATGTTCATGAACTGGAGCTCGTCGAGGTCGTCGCCGATC
AGGTTGCTACTACACTTTCCCTGAT-------------------------------------------------------
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----------------
>chr3B_952
GACGACAACAACA-------------------------------------------------------------------
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-----GCTCTCTAGCTAGGCACCCAACCTCCAGATTAGCT-----AAAATGGAGGGTTGTGAGTTTGTGACTGCATCGAT
CCGTTCTGGCCAACCGACGAGCTCCTCATCAAGTACAAGTACATCTCAGACTTCTTCATAGCGCTCGCCTACTTCTCCAT
CCTACTCGAGCTCATCTACTTCCTCAAGAAGCCATCCTTCTTCCCCTACCGATGGGTGCTCTTCCAGTTCGGCGCCTTCA
CCGTCCTCTGCAGGGCCACTCACCTCATAAACCTCTGGACCTTCACCATGCACACCAAGACCATCGCCATCGTCATGACC
ACGGCCAAGGTCTCCACGGCCGTCGTGTCTTGCGCAACCGCCCTCATGCTCGTACACATAATACCCGATTTGTTGAGCGT
CAAGACAAGAGAGTTGTTTCTCAAGAAGAAGGCCGACGAGCTTGACAGAGAAATGGGACTGATACGCACGCAGGAGGAGA
GGGGGAGGCATGTCAGAATGCTCACCCATGAGATCAGGAGCACGCTTGACAGGCACACCATCTTGAAGACTACTCTGGTT
GAGCTAGGGAGGATGTTGGGTCTGGAGGAATGTTCCTTGTGGATGCCGTCGCGGAGCGGTTCGAGCCTTCAGCTAACTCA
TACTCTACGCCACCCGATCCCGGGTGGCTCGTCTGTGCAGATCAATCTTCCTGTTGTCAATCAAATCTTCAGTAGCAACC
GGGCGATCATCGTGCCGCATACTTCTCCGTTGGCAAGGATCCGCCCTGTTCAAGGCCGGTATGTTCCACCAGAGGTGGCT
GCTGTGAAAGTCCCCCTGCTGCATCTTTCAAACTTCCAGATAAATGACTGGCCCGAGCTTTCGGCAAAAAGCTATGCAAT
TATGGTTTTGATGCTCCCGTCTGATAGCGCGAGGAAATGGCATGTTCATGAATTGGAGCTTGTCGAGGTCGTCGCCGATT
AGGTTGCTACTACACTTTCCCTGA--------------------------------------------------------
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>chr4A_1015
--------------------------------------------------------------------------------
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----------------------------------------------------------------------CTGCATCGAG
CCGCTGTGGCCGACTGACGAGCTGCTCATCAAGTACCAGTACATCTCCGACTTCTTCATAGCCCTCGCCTACTTCTCCAT
CCCGTTGGAGCTCATCTACTTTGTGAAGAAGTCGTCCTTCTTCCCATACAGATGGGTTCTCATCCAGTTTGGTGCCTTCA
TAGTCCTCTGTGGAGCAACCCATCTCATAAACCTCTGGACTTTCACCACCCACACAAAGACCGTGGCCATGGTCATGACG
GTTGCCAAGGTTTCGACGGCCGTCGTTTCCTGCGCGACAGCTTTGATGCTTGTTCACATCATCCCTGATTTGCTGAGTGT
CAAAACGAGGGAGCTGTTTCTGAAGAATAAAGCTGAGGAGCTCGATTGGGAGATGGGCTTGATAAGGACGCAGGAAGAGA
CCGGGAGGCATGTTAGGATGCTAACTCATGAAATCAGAAGCACACTCGATAGACATACGATTTTGAAGACTACCATTGTG
GAGCTAGGAAGGACCTTGGGTCTGGAAGAGTGTGCCCTGTGGATGCCGTCAAGAAGTGGCTCGAGTCTCCAGCTTTCGCA
TACTCTGCGCCACCAAATCACTGTTGGGTCATCTATATCAATTAATCTTCCTGTTATCAACCAAGTTTTCAGTAGCAATC
GAGCAATTATAATACCGCACACATCCCCTCTGGCACGGATTCGGCCTCTTGCAGGACGATATGTTCCACCAGAAGTGGCT
GCAGTGCGAGTACCTCTCCTGAATCTTTCAAACTTCCAAATAAATGACTGGCCAGAGCTTTCCGCAAAAAGCTATGCTAT
TATGGTTCTCATGCTTCCATCCGATAGTGCAAGGAACTGGCATGTGCATGAGTTGGAGCTTGTTGAGGTCGTCGCCGATC
AGGTT---------------------------------------------------------------------------
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----------------
>SNPs
S---SS---SSS--SS--SS---SS--SSSS-SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------SSSSSSSSSSSSSSSSSSSSSSSSS--------S
----------------------------SSSSSSSSSSSS--S---------S----------S--------------SS
SSSSSSS---------------------------------------------S--------SSS-S--------S-----
----------------S------------------S--------------S--S------S-------S-----------
--S----------------------------S-----------------S------------------------------
-----------------------------------------------------------------------------S-S
-------------------------------------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS--S--------------S-S-----------------------------S-----
--------------------------------------------------------------------------------
S----------------------------------------------------S-------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
-------------------------------------S--------------S-------------S-------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------S------------------------------------------------
--------------SS-----------S-------------------------S--------------------------
------------------------------------S--------------------------------S----------
--------------------------S-----S---S--------------SSSSSSSSSS--------S---S--S--S
---------------S---S----------S-------SS-------S-------------S------S-----------
----S---------------------------------------S--------------------S----S-S-------
S--------S------------S---------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S------SS--------------------------------------------------------
------S-S--------------------S-S------------------------------------------------
--------------------S-------------------------------------SS--------------------
------S------S-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
---S-S---------SSSSSS-------------------------S---------------------------------
----------------S------S-SSSS--SS-SSSSSSS----S------S---------SS-S--SSS---------
------------SS------------------------S----S-------------------S----------------
------------------------------------S---------------------------S---------------
-----------------------------------S-----------S--------------------------------
S--S--------------S----S-------------------S--------------------------------S---
-----------S---------S----------------------------------S-------S---------------
--------------------------------------------------------------------------------
------------S---SS-------------SS-SSSSSS----------------------------------------
-----S------------------------------------------------------S----------S--------
--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_732
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------------------------------------------------------------------------TCACCCTA
GGACACTTGGCT--------------------------------------------------------------------
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>reverse_2894
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CTCAGGTAGCTGTTGCCCTC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>forward_1398
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GTTCCTCAAGAAGGCCGACA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_3164
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CGATGCGTCACTTCTACCCA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
