>input_sequence_44909
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--------------AATAAAGGCAGATAGATTGCTCGCCTCCTCTTTTGCCCTCCAAGGCG----GAGGAACAGGAGGAC
AAAATCTATCTCGTACGAACACTTCTTCTAGACAATTTTGACCTATGTCTTCTTTCATTTCTTTCTTTTTTGCGAGGAAA
TTTTTACCTATGCCATCATGTCTAGTTTTTCTAGCAGTTCAATTTTCTCTTGCTA-CTTTTTGTTCATGCTGCTTCCTTG
CCAAACTTTTTAGGACTGTCTTTCTTAGTTTTTA----AGGATGATTTTATGGATAGACAATGGAGATGAACCATGATTT
CCCATTCGTAATTGCAATTGTTTGTCATGTTTTTGCAACGGCAATGTGACCTTCACATGTTTGATTTGCAGGAACCTGCC
CCTTTGTTTATAATAGCGTAGAATTATTATTATC---ACTATATTTTCACTTTGACAACAAGATGCCTGTGGCACGAGGC
GCCAAGAAGCCGGGTCCCGTCGACTCCGACTCTGACGACGATGGTCTCGTCTCCAAAAAGCCGACCAAATCGTCCACCTA
TTCGGTTCCTACCGGCAACAAGAAGCAGTACAAGGACGGGTTCAAGGACTCCGGCGGGCTGGAGAACCAGTCGGTGGAGG
AGCTCGAGAACTACGCGGCGTACAAGGCCGAGGAGACCACAGACACGCTCAACGGCTGCCTCCGTATCGCTGAGAACATC
AAGGAGGATGCCACCAACACGATGATAACCCTGCAGAAGCAGGGAGAGCAGATCAGCAGGACCCACGAGAAAGCCGTCGA
GATCGACCAGGACCTCACCAAGGTGCATATATATGCTCCACCACTTACTTAATTTGTTTTTATAAA--------------
-------CTCTGAACAAAATGCCGTTGTCACCTTACACCGAGGCCCGTTTGAAATGTGTGGTGCCTGATTGT-----TGT
CATGTGATGGTGGTGTTTGAATCTCTAGGGTGAGGGTCTCCTTAATAGCCTTGGAGGGTTCTTCTCCAAGCCATGGAAGC
CCAAGAAAACAAAGAAGATCAAGGGGCCAGTGTCGCGAGGTACGCATA--------------------------------
----------------------------------------------TACAACCTAATATTAGTACACTAACTAAGAAAAT
GCTCGGATCATGAGGCGTGCTCATTATTTCTTGGCAACCAACTCAATGGCATGCTTCTCAAACAAAAAACTCAATGGCAT
GACACAGATGATTCCTTCAAAAAGAAGGTGAACCGAATGGAACAGAGGGATAAGCTAGGGCTGAGCCCTCGAGGGAAGGG
GAATACCCGCGAGTACGGCGAAGCCACAAGTGCCATGGACAAAGTTCAGGTTCGTGCATGCTCTTGACTCACTGGCCTCC
ATGGAAATGTATCTACGAAATATAAGCATATTTAGAAGTGCTTTCGTTTCGTCAGTTGGAGAAGAAAAAGCAGGATGATG
CCCTCGACGATCTCAGCGGCGTGCTGGGGCAGCTCCAGGGCATGGCTGTTGACATGGGATCAGAGCTTGATAGGTAAAGT
CTTTAGTCTACTGCATATGCCTGGAACCACACTAAAGATTAATCAGAACTTTTGA-----ATTGAGTATCTTATGTGCTA
TCCAACGTTTCAGGCAAAACAAAGCACTCGATGATATGCACGGCGACGTGGAAGAACTCAACTCCAGGGTGAAGCAAGCA
AACCAGCGTGCCCGCAAGATTCTCGCCGATTAGTCGATCGTCAAACATGTCTGCAAGCATTATTATGAGTAGTCGACAAA
CATG----------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G423500
TAAGTTGTTGGTGCACATAGGTGAGCCTAGTTGTTCTAGGTTTTGTGCTTGACAAATTAACCGCTAGGTTTATTCCGCAT
TTGTTCAAGCCTAAACCGTAATTATTTTAAAGCGCCTATTCACCCCCCCCCCCCTCCCCCTCTAGGCGACATCCACGATC
TTTCACCTGTTCCACTTGACATTTGGCTACATTTTCGAATTTTGGTAGAAGTTGAGGATGCTTTTCCACTAGATGAGCCC
ACTAAGTCACCATGGGGAGGGCCATCAGAATAATAACTTCCCCAGATAAGTTTGACCCAAGATAGCTCCTGCTTATTGAA
GAATTTATGCAGGTGTTTAATAAGAAGAGCTTGATTATGAGTGTCCAGATGAAGCACACCCAGTCCACCATCCTCCTTAG
CCAAACAAACAGTGTCCCATGCTATGAGAGCAGAACCTCTATCTTGCATAGAATGTACATTATTAGTGTAATAATAATTT
TAGTACTT-AAAAATCAGTAGTACGAATATAAGAGTTAGTACTATATGATTAATTTATATGCTAAACATGATG-CTGTAA
TCATATAAGTTAGTACTACAATTACTA-----------------------------------------------------
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----------------------------------------------------------ATTTTGGGGGTAAAATCAGTAT
TATGAACATCAAAGTTAACATTGCAATACTAATTTCAGTACTAAAAGTCAGTACCACGACCATGCATGTTACTACAGTAA
-----TACTACTTTCACTATTAACTCAAGTCACAAATGTTA--G--TTTAGAGAGTATTTGCTCTTGTCATTCCGTTTTG
TTGCGTTTATAGCATGGCAAATGAGGCATGCATTATAGTGCTTCAAAAATAAAATAAAAAAATGAGGCATGCATTATAGG
ACTTGCATGCAGCCACCTCCTCCCCAATGCTCGGCTACATCCAATGGTCCGCGGGCATATCGCAGGTTGAAGCTAAAATA
AGCACTTACCATTTTTAGATATCTCGTTTAGCAAATAGACCACTATATA------------TACATGGTGAAAATAGTTC
ATTGTCAGCTATCCAATAAAGGCAGATAGATTGCTCGCCTCCTCTTTTGCCCTCCAAGGCG----GAGGAACAGGAGGAC
AAAATCTATCTCGTACGAACACTTCTTCTAGACAATTTTGACCTATGTCTTCTTTCATTTCTTTCTTTTTTGCGAGGAAA
TTTTTACCTATGCCATCATGTCTAGTTTTTCTAGCAGTTCAATTTTCTCTTGCTA-CTTTTTGTTCATGCTGCTTCCTTG
CCAAACTTTTTAGGACTGTCTTTCTTAGTTTTTA----AGGATGATTTTATGGATAGACAATGGAGATGAACCATGATTT
CCCATTCGTAATTGCAATTGTTTGTCATGTTTTTGCAACGGCAATGTGACCTTCACATGTTTGATTTGCAGGAACCTGCC
CCTTTGTTTATAATAGCGTAGAATTATTATTATC---ACTATATTTTCACTTTGACAACAAGATGCCTGTGGCACGAGGC
GCCAAGAAGCCGGGTCCCGTCGACTCCGACTCTGACGACGATGGTCTCGTCTCCAAAAAGCCGACCAAATCGTCCACCTA
TTCGGTTCCTACCGGCAACAAGAAGCAGTACAAGGACGGGTTCAAGGACTCCGGCGGGCTGGAGAACCAGTCGGTGGAGG
AGCTCGAGAACTACGCGGCGTACAAGGCCGAGGAGACCACAGACACGCTCAACGGCTGCCTCCGTATCGCTGAGAACATC
AAGGAGGATGCCACCAACACGATGATAACCCTGCAGAAGCAGGGAGAGCAGATCAGCAGGACCCACGAGAAAGCCGTCGA
GATCGACCAGGACCTCACCAAGGTGCATATATATGCTCCACCACTTACTTAATTTGTTTTTATAAA--------------
-------CTCTGAACAAAATGCCGTTGTCACCTTACACCGAGGCCCGTTTGAAATGTGTGGTGCCTGATTGT-----TGT
CATGTGATGGTGGTGTTTGAATCTCTAGGGTGAGGGTCTCCTTAATAGCCTTGGAGGGTTCTTCTCCAAGCCATGGAAGC
CCAAGAAAACAAAGAAGATCAAGGGGCCAGTGTCGCGAGGTACGCATA--------------------------------
----------------------------------------------TACAACCTAATATTAGTACACTAACTAAGAAAAT
GCTCGGATCATGAGGCGTGCTCATTATTTCTTGGCAACCAACTCAATGGCATGCTTCTCAAACAAAAAACTCAATGGCAT
GACACAGATGATTCCTTCAAAAAGAAGGTGAACCGAATGGAACAGAGGGATAAGCTAGGGCTGAGCCCTCGAGGGAAGGG
GAATACCCGCGAGTACGGCGAAGCCACAAGTGCCATGGACAAAGTTCAGGTTCGTGCATGCTCTTGACTCACTGGCCTCC
ATGGAAATGTATCTACGAAATATAAGCATATTTAGAAGTGCTTTCGTTTCGTCAGTTGGAGAAGAAAAAGCAGGATGATG
CCCTCGACGATCTCAGCGGCGTGCTGGGGCAGCTCCAGGGCATGGCTGTTGACATGGGATCAGAGCTTGATAGGTAAAGT
CTTTAGTCTACTGCATATGCCTGGAACCACACTAAAGATTAATCAGAACTTTTGA-----ATTGAGTATCTTATGTGCTA
TCCAACGTTTCAGGCAAAACAAAGCACTCGATGATATGCACGGCGACGTGGAAGAACTCAACTCCAGGGTGAAGCAAGCA
AACCAGCGTGCCCGCAAGATTCTCGCCGATTAGTCGATCGTCAAACATGTCTGCAAGCATTATTATGAGTAGTCGACAAA
CATGTCTGCAAATGTTATTATAAGTATCAACCATTATTTGCAGAGAAAAAGGAAATT-GAGACTGTTGTCGAACAAGCCT
CATTGGCATAATTTTTTGGTTATAAGAGAATCTACAACCGGGCACATAAA-CCATCCCCGAACGCCCGGGCGGGTTGCCC
GTTCACTGACCGATC-AAAAATATGCAACCCACCTGGGCATCTCAAACCGTCCTCAAACGCTCGAGCTGACCGGCAGCCC
TCATATCCACGCCGGATCTGCCCACGCTGGCCCATCCCGACCCCACATATATTCGTCCCCATTCTTTCGCCGGACAAAAC
CCCAAT-----CACTCCACTCCACTCGGCTTCGCCCCCATGCTCACTTTCGTCGAGCTCCGGACTTCTCCGGCATGGCGG
ACAATGGATATGACTC-------------------GACTGGGGTTTCATCCCATGCGGGATGGAGGAAACTATGGCCATC
CGCATTGCCCTCCGTCGCTCCCGGGAGGACTACGTCCAAGCAGCGATGCGATCAGTCCGGTGTGCATCCATTGCATCGGC
GCAACGGGCACTCAGATTAGTC-GGGCTGGAGCATCGCCGTCCGTTAGCCTCCCCATCATCAGTCCGACGGAGTATGCAT
GCTACAGG-------GTGCCCGCCGTGGGAAGGAGAGGATGAGGGCTCCGGTGAAGAGCATATCCGACTAGATCCATTTT
GTGCTTTCGAGC------TCCACAAGAAAGACGACAAGGGCGCCGGGAATGGCAAAGGCAAATGCCAGCCGTGGATGATC
CATAGTAGTATGTAAGTAGAACATGCCAAATTTTGGTAGTCCGATGGCATGTGCTTATTTAGCCGGATGGATTGGAGTTT
ACGTTATGTTGCATGTGTTTGTATCACTAGTAGAAAAAAGGGCTTTGGTCCAGCTAGAAAAGAGCATTAATCCCGGTTCT
TGCGGCTAGGGCACCGTACAGGCATTAGTCCCGGTTCAAATGGGATCTTTAGTCCCGGTTGGTGCCACGAAACGGGACTA
AACGG
>chr3A_460
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-----------------------------------------------------------TTATTAGTGTAATAATAATTT
TAGTGCTTAAAAAATCAGTAGTACGAATATAAAGGTTAGTACTATACGATTAATTTATACACTAAACCTGAGTACTGCAA
TCATATAAATTAGTACTATAATACTAATTTTGGGGTAAGATCAGT-----------------------------------
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---------------------------------------------------------------------------AGTAT
TATGAACATCAAAGTTAACATTGTAATACTAATTTCATTACTAAAAGTCAGTACCACGACCATGCATGTTACTACAGTAA
-----TACTACTTTCACTATTAACTCAAGTCACAAATGTTACAG--TTTAGAGAATATTTGCTCTTGTCATTCCGTTTTG
TTGCGTTTATAGCATGGC-----------------------------------------AAATGAGGCATGCATTATAGG
ACTTGCATGCAGCCACATCCTCCCCAATGCTCGGCTGCATCCAATGGTGCGCGGGCATATCGCAGGTTGAAGCTAAAATA
AGCACTTGCCCTTTTTAGATATCTTGTTTAGCAAATAGACCACTATATAGAGAGAAGGATTTACATGGTGAAAATAGTTC
ATTGTCAGCTATCCAATAAAGGCAGATAGATTGCTCGCCTCCTCTTTTGCCCTCCAAGGCGGGCGGAGGAACGGGAGGAC
AAAATCTATCTCGTACGAACAC---------ACAATTTTGACCTATGTCTTCTTTCATTTCTTTCTTTTTTGCGAGGAAA
TTTTTACCTATGCCATCATGTCTAGTTTCTCTAGCAGTTCAATTTTCTCTTGTTACCTTTTTGTTCATGCTGCTTCTTTG
CCAAACTTATTAGGTCTGTCTTTCTTAGTTTTTATATAAGGATGATTTTATGGATCGACAATGGCGATGAACCATGATTT
CCCATTCGCAATTGCAATTGTTGGTCATGTTTTTTCAACGGCAATGTGACCTTCACATGTTTGATTTGCAGGAACCTG-C
CCCTTGTTTATAATAGCGTAGAATTATTATTAC---TACTATATTTTCACTTTGACAACAAGATGCCTGTGGCACGAGGC
GCCAAGAAGCCGGGTCCTGTCGACTCCGACTCTGACGACGATGGTCTCATCTCCAAAAAGCCGACCAAATCGTCCACCTA
TTCGGTTCCTACCGGCAACAAGAAGCAGTACAAGGATGGGTTCAAGGACTCCGGCGGGCTGGAGAACCAGTCGGTGGAGG
AGCTCGAGAACTACGCGGCGTACAAGGCCGAGGAGACCACGGACACGCTCAACGGCTGCCTCCGTATCGCTGAGAACATC
AAGGAGGATGCTGCCAACACGATGATAACCCTGCAAAAGCAGGGGGAGCAGATCAGCAGGACCCACGAGAAAGCCGTCGA
GATCGATCAGGACCTCGCCAAGGTGCATATG-------CTCCACCATTTTACTTTGTTTGTACT-----ATATATAAACT
GCATGCGCTATGAACAAATTACTGTTCTCACCTTACACCGAGGCCTGTTTGAAATGTGTGGTGCCTTATTGT-----TGT
GATGT-----CGATGTTTGAATCTCTAGGGTGAGGGGCTCCTGAATAGCCTTGGAGGGTTCTTCTCCAAGCCATGGAAGC
CCAAGAAAACAAAGAAGATCAAGGGGCCAGTGTCGCGAGGTACGTAGATACTCCTTCTGTGAAGAAATATAAGACCATTT
AGATCAGTAGTGATGCAAACGCTTTTATATTTCTTTACGGAGGGAGTACAACCTAATATTAGTACACTAACTAATAAAAT
GCTTGGATCATGAGGCGTGCTCATTATTTCTTGGCAACCA---------------------------------------T
GACACAGATGATTCCTTCAAAAAGAAGACGAGCCGAATGGAACAGAGGGATAAGCTAGGGCTGAGCCCTCGAGGGAAGGG
GAATACCCGCGAGTACGGCGATGCCACAAATGCCATGGACAAAGTTCAGGTTCGTGCATGCTCTTGACTCACTGGCCTCC
ATGGAGAAGTATCTCCGAAATATAAGTATATTTAGAAGTGCTTTCGTTTCGCCAGTTGGAGAAGAAAAAACAGGATGATG
CCCTCGACGACCTCAGTGGCGTGCTGGGGCAGCTCCAGGGCATGGCTGTTGACATGGGATCAGAGCTTGATAGGTAAAGT
CTTTAGTTTACTGCATATGCGTGGAACCACACTGAAGATTAATCAGAACTTTTGA-----ATCGAGTATCTTATGTGCTA
TCCAACGTTTCAGGCAAAACAAAGCACTCGATGATATGCACGGCGACGTGGAAGAACTCAACTCCAGGGTGAAGCAAGCG
AACCAGCGCGCCCGCAAGATTCTCGCCGATTAGTCGATCGTCAAACATGTCTGCAAGCGTTATTATGAGTAGTTGACAAA
CATGTCTGCAAATGTTATTATAAGTATCAACCATTATTTGCAGAGAAAACGAAAATGAGAGATTGTTGTTGAACAAGCCT
CATTGGAGTAAC-TTTTGGTTATAAGAGCATCTACAAATGGGCACCTAAAACCAGCCCCAAACGCCCCGGCGGGCTGCCC
GTTCACTGGACGGTC-AAAAAAC-GCGACTCATCCGGATGCCTCAAATCGGCCTCAAACGCTCGGGCCGACCGGCACCCC
TCCTATCCACGTCGGATCTAACCCACATTGGCCACCCCGACCCCACATATATTCGTCTCCATTCTTTTGCCGAACAAAAC
CCTAGC-----CATTTCACTCTACTCGGCTTCGCCA-CAAGCTCACTTTCGGCGAGCTCCGGTCTTCTCCGGCATGGCGG
ACAACGGATTTGACTCCGGTCACTTTAGATCTGTCGGCT-GGGTTTCGTCCCATGCCGGATGGAAGAGACTATGGCCGTC
CGCATTGCCCTTCGCCGCTCCTAGGAGGACTACTCCGACCGGATAT--GGATCAGTCCGGCACGCATCCATTGCCTCGGC
GCAACGGCCGCTCGAATTCGCTGGGGCTAGAGCATCGCAGTCCGTTAGCCTCCCCATCTTCGGTCCGCCCAAATATGCAT
GCTACAAGGACCAGTGTGCCCACCGTGGGAAGGAGAGGATGAGGGCTCCGGTGAAGAGCAAATCCGACTTGATCCATTTT
GTGCTTTCGAGCGCTACTTCCACGAGAAAGACGACAAGGGCGCCGGAAAGGGCAAAGGC-AATGCCTGCCGTGGATGATC
CATAGCAGT-----------------------------------------------------------------------
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>chr3D_472
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-----------------------------------------------------------------------TAATAATTT
TAGTACTT-AAAAATCAGTAATACGAATATAAGAGTTAGTACTATATGATTAATTTATACACTAAACATGAGTACTGCAA
TCATATAAGTTAGTA-TATAATACTAATTTTGTTGTTGCCAAACGGCAACCCTAGCTACCTCTCCCTCTCCTCACTCGCT
CGAACAAGAAAGAAGGAAGGAGATGAACAGTGCACATAAGATTTTTCGGCCGGCGCACGAACGCCGCCACGGGTGCACGA
ACGCTCCAATCCTTTTCTTCTTTACAGTGGCTACATGGCTACACTCGGCTCACCCACAAGCAGTACACAGGGGCTTCTTT
TATACCCGACTCGCTAAGCAACTAACTCCAACAGCCCCTCATGCACACATACGCATGAGCTCCTCAAGACCCGGCCTCCT
CTCGTCGTGAGCCATCTACTCTTCCGCAAGAGCCGCACATCGTCCGAGCTTGCCGCTGGATCACGCCCAACGCTCCCGCG
ATCAACGCCTGTGACTAACCTGCACATGCACGTCCACTAACAAACTCTGTGCATGCTAACTTCTAACTACACGCACACAA
CGCACGCACACTGCCCATGCATAGCCGGACTATGCCCATACACCACTCGGACTATGCCTAGACACACACACACGCACGTA
ACGTGGTTTACTCCAACATACTCCCCCTAAACCACGATTTCGCCGTGCCGGAGGCGTGGCAGCGATGGCGGCGCTCGCCG
GCAGCTACGCGACGGAGCTCCGGGCCGTGTGTCGGCCCATGGAGGTAGTCGGCGCTGTGGCTGTCATGGCGCGTGGCGGA
GGCGGCGGGCGGTGACATCGTACGTGCGGCGACCGCGGAGGCTGCCGAGGCGCTGCGTGGTGGCGCGACGGCGCAGCACG
GCGTGGCGGCGTGGAGGCACTGCATGGCGGCATGGAGGCCGCGGCGGTGCAGGGCAATAAGCCGCGGCGGCGAGCCAGGC
GCGACCGGTGCGTGTTATGGGTGCGCACTGGACGCGTCGGGCGCGTCGGGACCGCGGCTGCGCGGTGAGCGCACTGGTGT
GGNNNNNNNNNNTGATGGCAATAAGCCATGCACACGGCCATGGCGACTGGCATGAAGATGACCAGATTGAGTCCGTAGCG
TGTGTGTCCCCCAGCGTGAGCCCGTGGTTGCGTTCGTGAAGTGGAGGAGCTGCATGCGGGGAGCCGTTGCGATCTGTTGG
AGTCAGGTGCGGCGTGCGCGCGGCTGGAGGGAGTTAGTTGCAAGCTAGCTAGATGGTTGGCCCGGCGGGTCATGTGGTCA
TGCATGGGCTAGCCCGGCGGGTCATGTGGTCATGCATGGATATGAATCCTGCATGTAGTGGTTAGCTTAGTGCGTGAGTT
AGTTGCCGGGTGTGCCAGCCGTGTGGTGTGTGTGCACGGGTATAAAAAACCCTCCTCCGTATATTGATCGAGTTGCGCCG
GTGTGGAGCCGAGGGTAGCCATGTAGCCACTGTAAAGAGGAAAAGGATTGGGGCGTTCGTGCGTCCATGGCGGCGTTTGT
GCGCCGGCCCGAAATTTCTTGTGTCTTGTGTCTTCTTCTACCTTTAGCCGTGTGTGAGAGAGGAGGCTGCGGTTCCAACA
ATTGGTATCATGAGCTTAGTGTCTTGGGCGTGCTTGCCGTGACGGAGGCGTGGCAGCGATGGCGGCGCTCGCCGGTGGCT
GCACGACGGAGCTCCGGGCCGTGTGTGGGCCCAAGGAGGTGGGCGGCGTTGTGGCTGTCATGGTGCGTGGCGGAGGCGGC
GGGCGGTGACGTCGTACGTGCGGCGACCGCGGAGGCCGGCGAGGCGCTGCGTGGTGGCGCAGGGGCGCAGCATGGCGTGG
AGGCACTACATGGCGGCATGGAGGCCGCGGCGGTGCAGGGCAATAAGCCGTGGCGGCGAGCCGGGCGCGACCGGTGCGTG
TTATGGGTGCGCACTGGACGTGTCGGGACCGCGGGCGCGCGGTGAGCGTTTGGTGCAGTCGGACTCGTCGAGCGCGTCGG
ATGCGCGCGGGACGTGCGGGACGCACTGGTGTGGTCGGGCTCGTCGGGCGCGTCGGATGCGCGCGGGACATGCGGGACGC
ACTATTGCGGTCGGGCGCGTCGGGTGCGCGCGAGACATGCGGGGCGCCGAGGGACGCCAGGCATGTGTCGCCGGCGGAGA
AGGAGCTCGGCGTGTGTCGCCGGAGTCGTGACGGAGCACGATGCGACCGGCGTCGTTGCGCCAGGTCGGGTCCGCGGACT
GGGTCACGGTCGTGGCGAGATCGATGACGGGAGGTGCAACAACTCCGACGACGACGATGTCATGGCTTAGGGGGTGAGTG
ATGGCAATAAGCCATGCACACGGCCATGGCGACTGGCATGAAGATGACCAGATTGAGTCCGTAGCGTGTGTGTCCCCCAG
CGTGAGCCCGTGGTTGCGTTCGTGAAGTGGAGGAGCTGCATGCGGGGAGCCGTTGCGATCTGTTGGAGTCAGGTGCGGCG
TGCGCGCGGCTGGAGGGAGTTAGTTGCAAGCTAGCTAGATGGTTGGCCCGGCGGGTCATGTGGTCATGCATGGGCTAGCC
CGGCGGGTCATGTGGTCATGCATGGATATGAATCCTGCATGTAGTGGTTAGCTTAGTGCGTGAGTTAGTTGCCGGGTGTG
CCAGCCGTGTGGTGTGTGTGCACGGGTATAAAAAACCCTCCTCCGTATATTGATCGAGTTGCGCCGGTGTGGAGCCGAGG
GTAGCCATGTAGCCACTGTAAAGAGGAAAAGGATTGGGGCGTTCGTGCGTCCATGGCGGCGTTTGTGCGCCGGCCCGAAA
TTTCTTGTGTCTTGTGTCTTCTTCTACCTTTAGCCGTGTGTGAGAGAGGAGGCTGCGGTTCCAACANNNNNNNNNNCGGG
ACGCACTGGGGCGGTCGGGCGCGCCGGGTGCGCGCGGGACGCGCGGGGCGCAGAGGGACGTCAGGCGTGTGTCGCCGGCG
GAGAAGGAGCTCGGCGTATGTCGCGGGGGTCGTGACAGAGCACGGTGCGACCGGCGTCAGTGCGCCAGGTCGGGTCCGTG
GCGGTGCGACCGGCGTCGATGCGCCGGGTCAGGTCCGCGGGCTGGGTCACGGCCGTGACGACGACAATGACAGGAGCTGC
AATAACTCCGGCGACGGCGAAATCGTGGTTTAAGGGGAGTATGTTGGAGTAAACCACGTTACGTGCATGTGTGTGTCTAG
GCATAGTCCGAGTGGTGTATGGGCATAGTCCGGCTATGCATGGGCAGTGTGCGTGCGTATTTTGGGGGTAAAATCAGTAG
TATGAACATCAAAGTTAACATTGGAATACTAATTTCAGTACTAAAAGTCAGTACCACGACCATGCATATTACTACAGTAA
TACAGTACTACTTTCACTATTAACTCAAGTCACAAATGTTA--GAATTTAGAGAATATTTGCTCTTGTCATTTCGTTTTG
TTGCGTTTATAGCATGGA-----------------------------------------AAATGAGGCATGCATTATAGG
ACTTGCATGCAGCCACCTCCTCCCCAATGCTCGGCTACATCCAATGGTGCGCGGGCATATCGCAGGTTGAAGCTAAAATA
AGCACTTACCCTTTTTAGATATCTCGTTTAGCAAATACACCACTATATATAGAGAAGGATTTACATGGTGAAAATAGTTC
ATTGTCAGCTATCCAATAAAGGCAGATAGATTGCTCGCCTCCTCTTTTGCCCTCCAAGGCGGGCGGAGGAACGGGAGGAC
AAAATCTATCTCGTACGAACACTTCTTCTAGACAATTTTGACCTATATCTTCTTTCATTTCTTTCTTTTTTGCGAGGAAA
TTTT-ACCTATGCCATCATGTCTAGTTTCTCTAGCAGTTCAATTTTCTCTTGTTA-CTTTTTGTTCATGATGCTTCCTTG
CCAAACTTTTTAGGATTGTCTTTCTTAGTTTTTA----AGGATGATTTTATGGATCGACAATGTCGATGAACCATGATTT
CCCATTCGCAATTGCAATTGTTGGTCATGTTTTTGCAACGGCAATGTGACCTTCACATGTTTGATTTGCAGGCACCCG-C
CCCTTGTTTACAATAGCATAGAATTATTATTATTATTACTATATTTCCACTTTGACAACAAGATGCCTGTGGCACGAGGC
GCCAAGAAGCCGGGTCCCGTCGACTCCGACTCTGACGACGATGGTCTCGTCTCCAAAAAGCCGACCAAATCGTCCACCTA
TTCGGTTCCTACCGGCAACAAGAAGCAGTACAAGGACGGGTTCAAGGACTCCGGCGGGCTGGAGAACCAGTCGGTGGAGG
AGCTCGAGAACTACGCGGCGTACAAGGCCGAGGAGACCACAGACACGCTCAACGGCTGCCTCCGTATCGCTGAGAACATC
AAGGAGGATGCCACCAACACGATGATAACCCTGCAGAAGCAGGGCGAGCAGATCAGCAGGACCCACGAGAAAGCCGTCGA
GATCGATCAGGACCTCACCAAGGTGCATATG-------CTCCACCATTTTACATTGTTTGTACTCTACTATATATAAACT
ACATGCGCTATGAACAAATTACTGTTCTCATCTTACACCGAGGCCTGTTTGAAATATGTGGAGCGTGATTGTTGTCATGT
GATGT-----TGGTGTTTGAATCTCTAGGGTGAGGGTCTCCTTAATAGCCTTGGAGGGTTCTTCTCCAAGCCATGGAAGC
CCAAGAAAACAAAGAAGATCAAGGGGCCAGTGTCGCGAGGTACGTAGATC------------------------------
------------------------------------------------CAACCTAATATTAGTACACTGACTAAGAAAAC
GCTCGGATCATGAGGCGTGTTCATTATTTCTTGGCAACCAACTCAATGGCATGCTTCTCAAACAAAAAACTCAATGGCAT
GACACAGACGATTCCTTCAAAAAGAAGACGAGCCGAATGGAACAGAGGGATAAGCTAGGGCTGAGCCCTCGAGGGAAGGG
GAATACCCGCGAGTACGGCGAAGCCACAAGTGCCATGGACAAAGTTCAGGTTCGTGCATGCTCTTGACTCACTGGCCTCC
ATGGAAAAGTATCTCCGAAATATAAGTATATTTAGAAGTGCTTTCGTTTCGTCAGTTGGAGAAGAAAAAGCAGGATGATG
CCCTCGACGATCTCAGCGGCGTGCTGGGGCAGCTCCAGGGCATGGCTGTTGACATGGGATCAGAGCTTGATAGGTAAAGT
CTTTAGTTTACTGCGTATGCGTGGAACCACACTGAAGATTAATCAGAACTTTTGAATCGAATCGAGTATCTTATGTGCTA
TCCAACGTTTCAGGCAAAACAAAGCACTCGACGATATGCACGGCGACGTGGAAGAACTCAACTCCAGGGTGAAGCAAGCA
AACCAGCGCGCCCGCAAGATTCTCGCCGATTAGTCGATCGTCAAACATGTCTGCAAGCGTTATTATGAGTAGTCGACAAA
CATGTCTGCAAATGTTATTATAAGTATCAACCATTATTTTCAGAGAAAACGAAAATGAGAGATTGTTGTTGAACAAGCCT
CATTGGCATAGC-TTTTGGTTATAAGAGCATCTACAATCGGGCACCTAAAACCATCCCCAAACACCCCGGCGGGCTGCCC
GTTCATTGGCGGGTAAAAAAAAC-GCGACTTACCCGGGCGCCTTAAATCGGCCTCAAACACTCGGACTGACCTACACCCC
-CATATCCATGTAGGATCTGGCCCACGTTGGCCACCCCGACCTCACATATATTTGT-CCCATTCTTTCGCGGGACAAAAC
CTTAGTCATTCCACTCCACTCCACTCGGCTTCGCCCCCAAGCTCACTTTCGGCGAGCTCCGGTCTTCTCTGGCATGGCAG
ACAACAGATTTGACTCCGACCACTTCAGATTCCTTGACTGGGATTTCGTCCCATGCGGGATGGAAGAGACTATGGCTGTC
CGCATTGCCCTTTGCCGCTCCTGGGAGGACTACGTCCGACCGGTGATGGGATCAGTCCAGCGTGCATCCATTGCGCCGGC
ACAACGGGTGCTCTGATTTGCCGGGGCTGGAGCATCGTGGTCCGTTAGCCTCCCCATCTTCGGTCCGCCCGAGTATGCAT
ACTACAGGGGGTAGTGTGCCCGCCGTGGAAAGGACAGGATGAGGGCTCCGGTGAAGAGCAGATCCGACTTGATCCATTTT
GTGCTTTCGAGCGCTACTTCCACGAGAAAGACGACAAGGGCGCCGGGAAGGGCAAAGGC-AAGGCCGGCCGTGGATGATC
CATAGTAGTATGTAGGTAGAACATGCCAAATTTTGGTAGTCTGATGACATGTGCTTATTTATCCTGATGGATTTAAGTTT
ACGTTACATTGCATGTGTTTGTAT--------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
-----------------------------------------------------------SS----------SS----S--
------------------S---SSSS------------------------------------------------------
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-----------------------S--------------------------------------------------------
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------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
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>forward_272
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------------TGGGGAGGGCCATCAGAATA------------------------------------------------
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>reverse_5469
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----------------------------TGAACCGAATGGAACAGAGGG-------------------------------
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>forward_381
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-----------------------------------------TGTCCAGATGAAGCACACCC-------------------
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>reverse_5472
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-------------------------------ACCGAATGGAACAGAGGGAT-----------------------------
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>forward_382
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------------------------------------------GTCCAGATGAAGCACACCCA------------------
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>reverse_5627
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--------------------------CATATTTAGAAGTGCTTTCGTTTCGT----------------------------
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>forward_387
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-----------------------------------------------GATGAAGCACACCCAGTCCA-------------
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>reverse_5768
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-------CTACTGCATATGCCTGGAACCA---------------------------------------------------
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>forward_403
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---------------------------------------------------------------TCCACCATCCTCCTTAG
CCA-----------------------------------------------------------------------------
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>reverse_5781
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--------------------CTGGAACCACACTAAAGATTAATCAGA---------------------------------
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-----
>forward_419
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-------------------------------------------------------------------------------G
CCAAACAAACAGTGTCCCA-------------------------------------------------------------
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>reverse_5823
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--------------------------------------------------------------TGAGTATCTTATGTGCTA
TCCAACGT------------------------------------------------------------------------
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-----
>forward_3954
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--------------TGGCAAATGAGGCATGCATT----------------------------------------------
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>reverse_6126
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---------------------------------------------ATAAACCATCCCCGAACGCC---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----
