>input_sequence_44904
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--------------------------ATGTGTGGCTGGTGCTGCTGCCTCGAGTGCATCCATAACATCCCTCCCCTCAAT
CTCCTCTTCCTCCACTTCTCCTCGGCTCCACGGACGGGAAGGGACGGAGAAG---GAGCACGAACCCTCAGCCCCATGGC
CTCCATCTCGGTCCCGGACCCTGCCTCTTCCCCAACCGAGGATGCAGAGAACATAAGGAAAGCAGTACAAGGTACAAC--
------AATTCAATCAAGTTTAT-TCGTTTTTGTAGCTCTCCTGGTCAATTCCTTTGTGAGGTGGCTGCTGTTCAAGTCT
GTTTTGTTGTTGTCATTTAAAAAAAATGGAGGGTAGA--------GAGATTGGGACAATGATTGTTCTTGGTGACAAGTG
ATTGCCAGTAGGAGTCCATTGATG-TGATGTTGTTGTTTTT-GCTCCAACGCGAGAAGAATCTGTACTGAAATCGTAAGA
AATGGGCAGGGTGGGGGACGGACGAGAACGCGCTGATCGAGATCCTGGGCCACCGGACGGCGGCGCAGCGCGCGGAGATC
GCCGTGGCCTACGAGGGCCTCTACGACAAGCCCCTCCTCCGCACGCTCCAAGACGAGCTCTCCAGCCACTTCAAGGTAAT
ATACACCTTCA---CCTCCATGGTTGGCGACCTCCTAGCTTCGTTGTCC---------CCGGACACCGTCCAA-----AA
TCTCCATGTCTGCGCGTTGATCTGGTCTGGTGG--TCAGGGCGCGATGACGCTGTGGACGATGGACCCGGCGGCGCGGGA
CGCCAAGCTGGCCTACAAGGCGCTCAGGAAGAAGGGCGGCGACCGGCACGCCTGGGTGCTCATCGAGGTCGCCTGCGCGT
CGTCGCCGGACCACCTCGTCGCCGTCAGGAAGGCCTACTGCTCCGCCTATGACTCGTCGCTCGAGGAGGACGTCGCCGCC
TGCCCGCTCTACAAGGAGCCCCTCAAGCAGGCAAGGCCGTGCCGATCTTGGCATTCTCCTTCTTTTTTGTCGCCGCCGTG
GGTTAATTTCTTGCTCTTGCCGGTC-----------AGTTGAGCGTTCGTGTA----TGGCTGTGCAGTTCTTGGTGCGC
CTGGTGAGCTCGTACCGCGACGGTGGCGACCACGTCGACGGCGAGCTGGCGAGGGCGGAGGCGGCCGAGCTGCACGGCGC
GGTGGCGGCCAAGAAGCAGCCGCTGCACGGGGACGTGGTCCGCATCGTCAGCTCCAGGAGCAAGCCGCAGCTCAAGGCGA
CGTTCCAGCACTACAAGCGAGAGCACGGCAAGGCCATCGACGAGGTCTACTTTCTACGGCGCCATTATTTTTCTACAGTT
TAAAAAAC-CCGAACACACGAAATAAACACTATAGTATCTGTTTTTATGCGCCGCAAATTCGCAGGTTCTCGAGGGGAAT
CGCAACGACAAGCTCTCGGCGATGCTGAAAACTGCGGTCTGGTGCCTGACATCGCCGGAGAAGCACTTCGCAGAGGTGAC
ACTCACAAGTGGACTCCGCCTTTTCCAGGGTGCTTCTGTTCTGACGTTCTCCATGGCTCTGCCTTTTCCAGGTGATCCGG
AGCTCAATCATCGGGCTCGGCACCGACGAGGAATCCCTGACCAGAGCGATCGTCTCGCGCGCCGAGGTCGACTTGAAGAA
AGTCAAGGAGGAATACAAGGTGAGGTACAAGACGACGGTGACCAAGGATGTCGTCGGCGACACTTCCGGCTACTACCAGG
GCATCCTGCTCACCCTCATCGGGGCCGAGTAG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G251900
TTTTTGTGCTCTTCCAAGCAGCTTGCATTGGAACGAAGTGTGGGTTTCACGGAGAAAGCAAAAAAAGGCTTTGAAATGCT
TTGTGAAATGTGGCATGTTCTCACTTCTCAGCTTTTGAACCGGG-CGCATGGAACGTGCAAGCATGTCCTCCGTTTTTCC
GAAAGGCTCTTCAGTTTATCTTGGAACCCATGACGCTTCTAGTTCTAAATGAATGGCTAAAGTAGTAAAGCGTGAGCAAA
TTACACATCTTTGCATGGTGGAAACAGTGTGGTTTTGGAG------------CTCTCTTTTAGAAGGAAACCTTACCGGT
TAAGCAATGCC-ATGTGTTTCCAAGACTTTGCCTCCAGCATGAGAATGTCTGATTTTGTTTGTATGATTATTATTTTTAT
CATTGTTACTGCTAAACCCCTTTGTTGTTGCACATGCTGAGATATCATCTTCCCAGATAGTGGAGGGCGAGTTGGAGCAA
CAGTTAGTTTGAAACTAAAGATGGGAATAGATAGTGTAGAGGAGAAATATGTACATCAAGGCGCCTGTAGCTCAGTGGAT
AGAGCGTCCGTTTCCTAAGCGGAAAGTCGTAGGTTCGACCCCTACCTGGCGCGGTTTGCCTCATAGTATTTGTTG----T
TCTCTTTTGTGCTTAGCTGGTGCACTGTTTTTGAAG-GATTTTTTTTTTCTCA----------------AGAGGAGAAGA
TCTGAAGAAGCA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TGAAACATGTAAAAAAGGGTGTCACGGTGATAACACTCTCCGCCATCTTCTCCAAG
GGAGGGAGTACTCATTTTCCTTAACTCCC---------------------------------AAGTTTCAACAAGAAAAT
GGTGAGGAGAAGTTTGAAAGTGCCCCAAGATCTAAATAAGATATTGTACTACA---------------------------
TAAGTACAGTG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ACTCATGACTAAGAACCTAAAATGAGCCAAGAAAAACGCAA
TCAAAAGAGG--CACGCGAAACACACGAGGAAATAATTAGGCAAAAAGCTCGTTGCCGGCGAAGCTTTCAACCCTGGTGG
TGTGG---------TGTGTGGCTGCCATGTGTGGCTGGTGCTGCTGCCTCGAGTGCATCCATAACATCCCTCCCCTCAAT
CTCCTCTTCCTCCACTTCTCCTCGGCTCCACGGACGGGAAGGGACGGAGAAG---GAGCACGAACCCTCAGCCCCATGGC
CTCCATCTCGGTCCCGGACCCTGCCTCTTCCCCAACCGAGGATGCAGAGAACATAAGGAAAGCAGTACAAGGTACAAC--
------AATTCAATCAAGTTTAT-TCGTTTTTGTAGCTCTCCTGGTCAATTCCTTTGTGAGGTGGCTGCTGTTCAAGTCT
GTTTTGTTGTTGTCATTTAAAAAAAATGGAGGGTAGA--------GAGATTGGGACAATGATTGTTCTTGGTGACAAGTG
ATTGCCAGTAGGAGTCCATTGATG-TGATGTTGTTGTTTTT-GCTCCAACGCGAGAAGAATCTGTACTGAAATCGTAAGA
AATGGGCAGGGTGGGGGACGGACGAGAACGCGCTGATCGAGATCCTGGGCCACCGGACGGCGGCGCAGCGCGCGGAGATC
GCCGTGGCCTACGAGGGCCTCTACGACAAGCCCCTCCTCCGCACGCTCCAAGACGAGCTCTCCAGCCACTTCAAGGTAAT
ATACACCTTCA---CCTCCATGGTTGGCGACCTCCTAGCTTCGTTGTCC---------CCGGACACCGTCCAA-----AA
TCTCCATGTCTGCGCGTTGATCTGGTCTGGTGG--TCAGGGCGCGATGACGCTGTGGACGATGGACCCGGCGGCGCGGGA
CGCCAAGCTGGCCTACAAGGCGCTCAGGAAGAAGGGCGGCGACCGGCACGCCTGGGTGCTCATCGAGGTCGCCTGCGCGT
CGTCGCCGGACCACCTCGTCGCCGTCAGGAAGGCCTACTGCTCCGCCTATGACTCGTCGCTCGAGGAGGACGTCGCCGCC
TGCCCGCTCTACAAGGAGCCCCTCAAGCAGGCAAGGCCGTGCCGATCTTGGCATTCTCCTTCTTTTTTGTCGCCGCCGTG
GGTTAATTTCTTGCTCTTGCCGGTC-----------AGTTGAGCGTTCGTGTA----TGGCTGTGCAGTTCTTGGTGCGC
CTGGTGAGCTCGTACCGCGACGGTGGCGACCACGTCGACGGCGAGCTGGCGAGGGCGGAGGCGGCCGAGCTGCACGGCGC
GGTGGCGGCCAAGAAGCAGCCGCTGCACGGGGACGTGGTCCGCATCGTCAGCTCCAGGAGCAAGCCGCAGCTCAAGGCGA
CGTTCCAGCACTACAAGCGAGAGCACGGCAAGGCCATCGACGAGGTCTACTTTCTACGGCGCCATTATTTTTCTACAGTT
TAAAAAAC-CCGAACACACGAAATAAACACTATAGTATCTGTTTTTATGCGCCGCAAATTCGCAGGTTCTCGAGGGGAAT
CGCAACGACAAGCTCTCGGCGATGCTGAAAACTGCGGTCTGGTGCCTGACATCGCCGGAGAAGCACTTCGCAGAGGTGAC
ACTCACAAGTGGACTCCGCCTTTTCCAGGGTGCTTCTGTTCTGACGTTCTCCATGGCTCTGCCTTTTCCAGGTGATCCGG
AGCTCAATCATCGGGCTCGGCACCGACGAGGAATCCCTGACCAGAGCGATCGTCTCGCGCGCCGAGGTCGACTTGAAGAA
AGTCAAGGAGGAATACAAGGTGAGGTACAAGACGACGGTGACCAAGGATGTCGTCGGCGACACTTCCGGCTACTACCAGG
GCATCCTGCTCACCCTCATCGGGGCCGAGTAGCCATTGCCAGGATCATCCAAGCTCGGAGGATGCAGTTAA---------
TGTT--------------------------------------TGCTACTTAGACCGTTCGATCGATCAGAGTGGCAATGT
CTTGT------GTACAATCTAGAGAGTGAAGTACTTGGTGTTTTGAAATAAGACCCGTGACAGTTCATTTATTGGTGTAT
ACAGCACTAGTTTGAGACAACGG---TACTTCCATAACGATTTGATTTATCCGAAGA--TGCACGGTGCCATGGTATCAT
AAACTCATTTTATGCACAATAGTTGCGGCGATTCGACTCTAAGTAAAACACAGAACGGACGGTAGAACGGTAGAACCAAA
CACACATCCTATTTCGTCAACAGGCGGGTGCAATCTCACTTCTTCCTTGCAAGAGCAGCTGCGATCCCACCAACGATAAG
TCCTACCGCAGTTGTGGCGATTCCTATGCCGATCACACCATCTGCACGGAACAGTGCTATCAGTATCCGTAGCCAGCATA
CA--------------------------------------------------TTGCTTGATTTTGAAAACTCAGCATAAA
TTACTCATAGCGCACTGTTGTCACTTCATCAGATAAAATTATCACA----------------------------------
--------------------------------------------TAGTTTTCTACTGAGAATTGAGGAACATGTAAAAAA
GATCAAACTGCCAATGAATCGTAGAAAAGTATGGTCGATTATT----------CTTATCTTACCTTTAGCAATTTTATCC
TCTATTGCCTTCTTCAGAGATGATGCCTGCCTCCAATCTGGTTGAATCTACAAGAAAGGGGACAAGATAAATTAAAAGGG
GGAATTTATG---------------------------------------------TTCAACTAGTATGGGATATAAAGAT
GATGGTCCCAGATTACTCCTTAAACAGTTGAAAAACATATGCACTTATATTACCCCCATAAAGTTTGTTTTGCATATTTT
TGTCTGAATTTTAATTGTATCCCAAGTTTAAAGTGTATAGG-----TCACATAGATAAGCATGTCTAACTAACATGTCCG
GCACAAAAATGATACTTGGGAATTTGGCTCAAGCATAGCCAAATGTTGAAATGGAGTAGCACACAAGGAATCAGCAAC
>chr1D_36
-----------------------------------AAGTGTGGGTTTCAGAGAGAAAGCAA-AAAAGGCTTTGAAATGCT
TTGCGAAATGTGGCATGTTCTCAGCTTTGGAACC--------GG-CGCATGGAACGTGCAAGCATGTCCACCGTTTTTTT
GAAAGGCTATTCAGTTTATCTTGGAGCCCATGACGCTTCTCGTTCTAAATGAACGGCTAAAGTAGTAAAGCGTGAGCAAA
TTACGCATCTTTGCATGGTGGAAACAGTGTGGTTTTGGAGATTTGTTTGAAGCTCTCCTTTAGAAGGAAACCTTGCCGGT
TAAGCAATGCCCATGTGTTTCCCAGATTCAGCTTCCAGCATGAGAATGTCTACTTTTGTTTC--TGATTATTATTTTTAT
CATTGTTACTGCTAAACTCCTTTGTTGTTGCACATGCT-------CATCTTCCCAAATAGTGGTGGGTGAGTGGGAGGAA
CAGCTAGTTTGAAACTGCAGAACTGAATAGATAGAGGAGAGGAGAAATAAATTCATCAAGGCGCCTGTAGCTCAGTGGAT
AGAGCGTCCGTTTCCTAAGCGGAAAGTCGTAGGTTCGACCCCTACCTGGCGCGTTTTTATTTTCTGTATA----------
TTTCTTTTGTGCTTAGTTGGTGCACTATTTTTTAAGT-ATCTTTTTTTATTTCACAAGAGG--------AGAAGAGAGGG
TATGAACAAGTACTTCTCTTTTTAGTCCGCATATAAGTTTTGGTCAAAGTCAAGCTTTGTAGAGTTTCACTAACTTTATA
TTAAAAAATATAAACATTCACAATATGAAATCAATATTATCAGATGCACCATGATACATTTTTTCATCCTATATAGTTTT
AGTATTGTAGATGTTCATATTTTTTAATGTAAATTTAGTCAAAATTTGTGTAGTTTGACTTTGATCAAATCTTATATGCG
GAGTCAAAAGAAATGGAGGGAGTATGAAACATGTAAGAA-----GTGTGTAAATGATACTCCTACTGATTTTTTT-----
--------------------TTAACTCTC---------------------------------AGGATCCAATAAGAAGAT
GGTGAGGGGAAGTCTGAAAATACA-CAAGTTCTAAATACGATACTTCCTCCGTAAAGAAATATAAGAGCATTTAGATCAC
TAAGTACAGTGCGGCATGAGCAAGTCTGAAAAATAGTTGAGGCAAGCATTAACTTAAGAATTATTACAGCGTGTGTTATA
AGACGGAAGAAGGAATAATTCAGTACTAGTATTATTACCCACCTTTTTCCAGCAAACAAATCTAATTACCTCTTCAATGC
TGATTAAATAGGAGCAATGAACATACCCAAAATGCCCCTCGCATGACCTGTACTACGCAACATCAGCCAGGCTACTACCT
A------ATTACAAGCTGGATAACCGTGGCACCATTAAAACTCATCACTGAGAACCTAAAATGAGCCAAGAAAAACACAA
TCAAAAGATG--CACGCGAAACACACGAGGAAATAACTAGGCGAAAAGCCCATTGCCGGCGAAGCTTTCAACCCTGGTGG
TGCGG---------TGTGCGCCTGCCATGTGTGGCTGGTGCTGCTGCCTCGAGTGCATCCATAACATCCCTCCCCTCAAT
CTCCTCTTCCTCCACTTCTCCTCGGCTCCACGAACGGGAAGCGAGGGAGAAGAAGGAGCGCGAACCCTCAGCCCCATGGC
CTCCATCTCGGTCCCGAACCCTGCCCCTTCCCCAACCGAGGACGCGGAGAGCATAAGAAAAGCAGTGCAAGGTACAAT--
------GATTCAATCGAGTTTACCTCGTTTTTGTAGCTCTCCTGGTCGATTCTTTTGCGAGATGGCTCG------AGTCT
GTTTTGTTGTTGTCATTTGAAAAAATTGGAGGGCAGGGAGATTGGGAGTTTGGGACAATGATTGTTCTTGGTGGCAAGTG
ATTGCCAGTAGGAGTCCATTGATATTGATGTTGTTGTTTTTCGCTCCGACGCGAGAAGAATCCGTACTGAAATCG--AGA
AATGGGCAGGGTGGGGGACGGACGAGAACGCGCTGATCGAGATCCTCGGCCACCGGACGGCGGCGCAGCGCGCGGAGATC
GCCGTGGCCTACGAGGGCCTCTACGACAAGCCCCTCCTCCGCACGCTCCAGGACGAGCTCTCCAGCCACTTCAAGGTAAT
ACACACCTTCA---CCTCCATGGCGACCTCCATGT--GCTTCGTCGTCC---------CCAGACA----CCAA-----AA
TCTCCATGTGCT-----------------------TCAGGGCGCGATGACGCTGTGGGCGATGGACCCGGCGGCGCGGGA
CGCCAAGCTGGCGTACAAGGCCCTCAGGAAGAAGGGCGGGGACCGGCACGCCTGGGTGCTCATCGAGGTCGCCTGCGCGT
CGTCGCCGGACCACCTCGTCGCCGTCAGGAAGGCCTACTGCTCCGCCTACGACTCGTCGCTCGAGGAGGACGTCGCCGCC
TGCCCGCTCTACAAGGACCCCCTCAAGCAGGCAAGGCCGTGCGGATCCTGGCATTCTCCTCCCTTTTTGTCGCCGCCGTG
GGTTGATTTCTTGCTCTTGCCGTTGCCGGTCAGTTGAGCTGAGCGTTCGTGTA----TGCGTGTGCAGTTCTTGGTGCGC
TTGGTGAGCTCGTACCGCTACGGCGGCGAGCACGTCGACGGCGAGCTGGCGAGGGCGGAGGCGGCCGAGCTGCACGGCGC
GGTGGCGGCCAAGAAGCAGCCGCTGCACGGCGACGTGGTCTGCATCGTCAGCTCCAGGAGCAAGCCGCAGCTCAAGGCGA
CGTTCCAGCACTACAAGCAGGAGCACGGCAAGGCCATCGACGAGGTCTACTTTCTGCGGCGCCATTATTTTTCTACAGTT
AAAAAAGAACTGAACACACAAAAATGA-ACTACAGTACCTATTTTTATGCGCCGCAAATTCACAGGTTCTCGAGGGCAAT
CGCAACGACAAGCTCTCCGCGATGCTGAAAACCGCGGTCTGGTGCCTGACATCGCCCGAGAAGCATTTCGCAGAGGTAAT
ACTCAAAAGT----TCAACCTTTTCCAGGCTGCTTCTGTTCTGATGTTCTTCATGGCTCTGCCTTCTCCAGGTGATCCGG
AGCTCGATCATCGGGCTCGGCACCGACGAGGAGTCCCTGACCAGAGCGATCGTCTCGCGCGCCGAGGTCGACATGAAGAA
AGTCAAGGAGGAATACAAGGTGAGGTACAAGACGACGGTGACCAAGGACGTCGTCGGCGACACTTCCGGGTACTACCAGG
GCATCCTGCTCACCCTCATCGGGGCCGAGTAGCCATTGCTAGGATCATCCAAGCTCGGAGGATGCAGTTCAATGGCGTAT
TGTT--------------------------------------TGCTACTTAGACCGTTCGATCCAACAGAGTGACATTGT
CGTGTGTACAAGTACAATCTAGAGAGTGAAGTG-TTGATGTTGTGAAATAAGACCCTTGGCAGTTCATTTATTGGTGTAT
TCAGCACTAGCTTGAGACAATGG---TACTTCCATCACGATTTGACTTATCCGAAGA--TACACGGTGCCATGGTATCAT
AAACTCATTTTATGCACAATAGTTGCGGCGATTCGACTCTAAGTA--ACACAGAACGAACGGTA--------GAACCAAA
CACACATCCTATTTCATCAACAGGCGGGTGCAGTCTCACTTCTTCCTTGCAAGAGCAGCTGCGATCCCACCGACGATAAG
TCCTACTGCAGTTGTGGCGATTCCTATGCCAATCACACCATCTGCACGGAACAGGGCTATCAGTATCTGTAGCCAGCATA
CA--------------------------------------------------TTGCTTGATTTTGAAAACTCAGCATAAA
TTACTCATAGCGCACTGTTGTCACTTCAACAGATAAAATTATCACATACTCCCTCCGTCCCATAATATAAGAGTGTTTTT
TACGCTACAACGCTCAACGCTCTTATATTATGGGACGGAGGGAGTAGTTTTCTACTGAGGATTGAGGAACATATAAAAAA
GATCAAACTGCCAATGGATCGTAGAAAAGTATGGTTGATTAAT--------------TCTTACCTTTAGCAATTTTATCC
TCTATTGCCTTCTTCAGAGATGATGCCTGCCTCCAATCTGGTTGAATCTACAAGAAAGGGGTCAAGATAAATTAAAAGGG
GGAATTTA-AAAGGCGGCAATATCCTTAAACGGTTGAAAAACATATGCACTTGTATTCAACTAGTATGGAATATAAAGAT
GATGGTCCCAGATTACCCCTTAAACAGTTGAAAAACATATGCACTTATATTACCCC-ATAAAGTTTGTTTTGCATATTTT
TGTCTGAATTTTAATTGTATCCCAAGTTTAAAGTGTATACTGTAGCTCACATAGATAAGTATGTCTAACTAACATGTCCG
GCACAAAAATGCTACTTGGGAATTAGGCTCAAGCATAGCCAAATCTTGAAATGGAGTAGCACACAAGGAATCAGCAAC
>chr1A_36
-----------------------------------AAGCGTGGGTTTCACAGAGAAAGCAA-AAAAGGCTTTGAAATGCT
TTGCGAAATGTGGCATGTTCTCCGCTTTCGAACC--------GGGCGCATGGAACGTGCGGGCATGTCCTCCGTTTTTTT
GAAAGGCTCTTCAGTTTATCTTGGAGCCCATGACGCTTCTCGTTCTAAATGAACGGCTAAAGCAGTAAAGCGTGAGCAAA
TTATACATCTTTGCATGGTGGAAACAGTGTGGGTTTGGAGATTTGTTTGGAGCTCTCTTTTGGAAGGAAACCTTACCGGT
TAAGCAATGCCCATGTGTTCCCAAGATTCTTCTTCCAGCGTGAGAATGTCTGT--------------------TTTTTAT
CATTGTTGCTGCTAAACTCCTGTGTTGTTGCACATGCT-------GATCTTCCCAAATAGTGGTGGGTGAGTGGGAGGAA
CAGCTGGTTTGAAGCTGCAGAA-GGAATAGAGAGTGGAGAGGAGAAATAAATTCATGAAGGCGCCTGTAGCTCAGTGGAT
AGAGCGTCCGTTTCCTAAGCGGAAAGTCGTAGGTTCGACCCCTACCTGGCGCGTTCGCCTACTGTTTTTTTTTTGTCTCT
TTTCTTTTGTGCTTAGTTGGTGCACTGTTTTTGAAGCGATTTTTTTTTATTTCCCAAGAAGAGGAGAGTAGAAGAGATGG
TATGAACAAGTA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TGAAACATGTAAAAAAAATGGTGTGTAAATGGTACTCCTACTAATTTTCTT-----
--------------------TAACGCTCAGGTTCCAGTAAGAACACTCGCAAAAAAAAAAAAAGGTTCCAGTAAGAAGAT
GGTGAGGACAAGTCTGAAAACACCCCAAGATCTGAATAAGATACTAGAT-------------------------------
----TACAGTACAGCATGAGCAAGTCTG-AAAATAGATGAGGCAAGCCTTAACTTAAGAATTATTACAACGTGTGCTATA
AGGCGGAAAAGGGAACAATTCATTAAG-----TATTACTCACCCTTTTCCAGCAAACAAATCTAAATACCTCTCCAATGC
TGATTAAGTAGGAGCAATGAACATACCCAAAATGCCCCTCGCATGACCTGTACA---CAACATCAGCCAGGCTACTTACC
CCATTACATTACAAGCTGGATAACAGTGGCACCATTAAAACTCATGACTAAGAACCTAAAATGAGCCAAGAAAAACACAA
TCAAAAGATGCACACGCGAAACACACGAGGAAATAATTAGGCAAAAAGCCCATTGCCGGCGAAGCTTTCAACCCTGGTGG
TGTGCTGTGGTGTCTGTGTGGCTACCATGTGTGGCTGGTGCGGCTGCCTCGAGTGCATCCATAACATCCCTCCCCTCAAT
CTCCTCTTCCTCCACTTCTCCTCGGCTGCACGGACGGGAAGGGAGGGAGAAGAAGGAGCGCGAACGCTCAGCCCCATGGC
CTCCATCTCGGTCCCGGACCCCGCCCCTTCCCCGACCGAGGATGCAGAGAGCATCAGAAAAGCAGTGCAAGGTAAGTACT
TACGAAGATTCAATCAAGTTTAC-TCCATTG-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------ATTGATGTTGTTGTTTTT-GCTCTACCGCAAGAAGAACCTGTGCTGAGATCGTGAGA
AATGGGCAGGGTGGGGGACGGACGAGAACGCGCTGATCGAGATCCTGGGCCACCGGACGGCGGCGCAGCGCGCGGAGATC
GCCGTCGCCTACGAGGGCCTCTACGACAAGCCCCTCCTCCGCACGCTCCAGGACGAGCTCTCCAGCCACTTCAAGGTAAC
ATACACCTTCGCCTCCTCCATGGCCGGCGGGCTCCTAGGCTTCTTCCTTCGTCCCCGGCCGGACACCGTCCGAAATCTAA
TCTCCATGCCTGCGCGTTGGTCTGGTCCGGTGGTCTCAGGGCGCGATGACGCTGTGGGCGATGGACCCGGCGGCGCGGGA
CGCCAAGCTGGCCTACAAGGCCCTCAGGAAGAAGGGCGGCGACCGGCACGCCTGGGTGCTCATCGAGGTCGCCTGCGCGT
CGTCGCCGGACCACCTCGTCGCCGTCAGGAAGGCCTACTGCTCCGCCTACGACTCGTCGCTCGAGGAGGACGTCGCCGCC
TGCCCGCTCTACAAGGACCCCCTCAAGCAGGCAAGGCCGTGCCGATCCTGGCATTCTCCTTC--TTTCGTCGCCGCCGTG
GGTCCATTTCTTGCTCTTGCCGTTGCCGGTCAGTTGAACTGAGCGCTCGTGTGCGTGTGCGTGTGCAGTTCTTGGTGCGC
CTGGTGAGCTCGTACCGCCACGGCGGCGAGCACGTCGACGGCGAGCTGGCGAGGGCCGAGGCGGCCGAGCTGCACGGCGC
GGTGGCGGCCAAGAAGCAGCCGCTGCACGGGGACGTGGTCCGCATCGTCAGCTCCAGGAGCAAGCCGCAGCTCAAGGCGA
CGTTCCAGCACTACAAGCGAGAGCACGGCAAGGCCATCGACGAGGTCTACTTCAT-------CATCATTTTTCTACGGTT
AAAAAAAC-CTGAGCACACAAAATGAACTA-----TATCTATTTTGATGCGC--------CACAGGTTCTCGAGGGCAAT
CGCAACGACAAGCTGTCGGCGATGCTGAAAACTGCGGTCTGGTGCCTGACATCGCCGGAGAAGCACTTCGCAGAGGTAAT
ACTCAAAAG----CTCAACCTTTTCCAGGCTGCTTCAGTTCCGATGCTCTTCATGGCTCTGCCTTTTCCAGGTGATCCGG
AGCTCGATCATCGGGCTCGGCACCGACGAGGAATCCCTGACCAGAGCGATTGTCTCGCGCGCCGAGGTCGACTTGAAGAA
AGTGAAGGAGGAATACAAGGTGAGGTACAAGACGACGGTGACCAAGGATGTCGTCGGAGACACCTCCGGGTACTACCAGG
GCATCCTGCTCACCCTCATCGGGGCCGAGTAGCCATTGGCAGGATCATCCAAGCTCAGAGGATGATGTTCAATGCCATAT
TGTTTGGTACTTAGACCGTTCAGAGGATGATGTTCAATGGCATGGTACTTAGACCGTTCGATCGAACAGAGTGGCATTGT
CGTGTGT------ACAATCTAGAGAGTGAAGTG-TTGGTGTTGTGAAATAAGACCCCTAATAGTTCATTTATTGGTGTAT
TCAGCACTGGTTTGAGACAATGGTACTACTTCCATCACGATTTGATTTATCCGAAAGATTACACGGTGGCATGGTATCAT
AAACTCATTTTATGCAC-ATAGTTGCGGCGATTCGACTCAAGT---AACACAGAACAAACGGTAGAACGATAGAACCAAA
CACACATCCTATTTCATCAACAGGCGGGTGCAGTCTCACTTCTTCCTTGCAAGAGCAGCTGCGATCCCACCGACGATAAG
TCCTACTGCAGTTGTGGCGATTCCTATGCCAATCACACCATCTGCACAGAACAGGGTTATCAAGCAATAAGTGCACACGT
TTTTCAAAATCAAGTAATTTATGAACAGGGTTATCAGTATCTATTTTTACAGTTGCTTGATTTTGAAAACTCAGCATAAA
TTACTCCTAGCTTGCTGTTGTCACTTCAACAGATAAAATTATCGCATA--------------------------------
----------------------------------------------GTTTTCTACTG-----------------------
--------------TGAATCGCAGAAAAGTATGGTCGATTAAACTTATCTAAACTTATCTTACCTTTAGCAATTTTATCC
TCTATTGCCTTCTTCAGAGATGATGCCTGCCTCCAATCTGGTTGAATCTACAAAAAAGGGGACAAGATCAATTAAAAGAG
GGAATTTATAAAGGCGGCAATATCCTTAAACGGTTGAAAAACATATGCACTTATATTCAACTAGTATGGAATATAAAGAT
GATGGTCCCAGATTACCCCTTAAACAGTTGAAAAACATACGCACTTATATTACCCC-ATAAACTTTGTTTTGCATATTTT
TCTCTGAATTTTAATTGTATCCCACGTATAAAGTGTATAGG-----TCACATAGATAAGTATGTCTAACTAACATGTCCG
GCACAA-AATGCTACTTCGGAATTAGGCTTAAGCATAGCCAAATCTTGAAATGGAGTAGCACACAAGGAATCAGCAAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S----------S------------------
---S-------------------SS-S--SSSSSSSSSSSSS------------------------------------SS
-------------------------S--------------S------------S--------------------------
--------------------------------------------------------------------------------
--------------------------S-S---S-------------------S--------SSS----------------
-----------------S--------------------SSSSSSS----------S-------S---S----S----S--
---S------------SS---SS-------------S------------SS-S---------------------------
-----------------------------------------------------S---S-S--SSS------S--------
-S--------------S-------------------------------SS-SS-------------------S----S-S
-S----S---S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------SSSS--SSSSSSSSS-SSSSS--S-SSSS-S--S-SSSSS
SSSSSSSSSSSSSSSSSSSS-------------------------------------------S---S---S-----S--
-------------S-----S-S---------------------S-SS-SSSSS---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------S----------------------------------------S-S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------S--------------S--------------------
-------------------------S------------------------S------S--------S----------S--
------S---------------S------------------------S----S----S---S-----SSSSSSSS-----
------------------S------S-------S--S-----------S------------------------S------
-----------------------S----------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-----------------------SS----S--------------------------------------------------
-------------------S-------S-----------------------------S----------------------
---------------------S----------------------------------------------------------
-------------------------------------------------S------------------------------
-----------------S-----------------------------S--------------S-----------------
----S-----------------S-S-------------S--------------------SS-------------------
------------------S----S-----S--------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
S---------S--------S----S-------S-------S--------------------S--------------S---
-----------------------------------------------------------------------------S-S
-----S----SSS---SS-----------S--------------S-----S-----------------------------
-----S--------------------------------------------------------------------------
---------------------------------------------------------------------S----------
---------------------------------------------------------------------S----------
-----------------------------------------------------------------S----------S---
-S------------------------------SS--------S-------------S-----------------------
S-------------------S--------------S------------------------S-------------------
---------------------------------------------S-----------S-----------S----------
---------------S----------------S--------------------------------------S--------
------S-----------------------S-----------------------S------------S------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
-----------------------------------------------------------S------------S-------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
---------S-----------------------------------------------------------S----------
----------------S---------------------------------------S-----------------------
-----------------------------------------------------------S--------------------
-----------S------------S-------------------S---------------------------------
>forward_1037
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CACTCTCCGCCATCTTCTCC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_2679
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TTGAGCGTTCGTGTATGGCT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_1041
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CTCCGCCATCTTCTCCAAG
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_3022
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GCAGGTTCTCGAGGGGAAT
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_2701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTTGAGCGTTCGTGTATGGC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_3871
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GATCACACCATCTGCACGGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
