>input_sequence_44880
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATGGCGGCGTGCAACGGCCTGTTCGTGTACCACAT
CCTCGGCCTGGCCTCCCTGGTGGCCGTCTTCTACTTCTCCCTCCTCGGCGAGGTGGACCTCCGCTTCCCCGGCCTCCTCC
CGTCCTCCGGCGCGTCCCAGCACTCCCACGACGCGTCCCTGCCGTTCGTGGAGCGGCGCGGCGCGCAGCTCTTCCTGGAG
GGCCGCCCGTTCTACATCAACGGGTGGAACTCGTACTGGCTCATGGACCAGGCGGTGGAGCCGGCCAGCCGCCACCGTGT
GTCCGACATGTTCCGCGCCGCCACCGGGATGGGGCTCACGGTGTGCCGCACCTGGGCCTTCAACGACGGCGCCTACAACG
CGCTCCAGCTCTCCCCGGGACACTTCGACGAGCGCGTCTTCAGGGCGCTGGACCTGGTGGTCGTGGAGGCCCGGCGGCAC
GGCGTGCGGCTCGTCCTCAGCCTGGCCAACAACCTGGAGGCGTACGGCGGGAAGACGCAGTACGTGCGGTGGGCGTGGGA
CGAAGGCGTCGGCCTCACCGCCTCCAACGACTCCTTCTTCTTCGACCCCGCCATCCGTGACTACTTCAAAGTCTACCTCA
AGGTAAATT-------AGTTGCAGCATCGTGCCCACAGCATCAAAGTCTAGCTAGTTGATTTTTTGCTGTTATTTTTAGC
ACCCCAATTGACGGG----AAAAAAGTGTCGGTGGCAATTTTATACAGTAGTTAAAGTTGCAAATTTTACTTTGCTTT--
GGTGCAGGCATTGTTGACGAGGACGAACCACTTGACGGGGGTGCAGTACAAGGACGACCCTACCATCTTGGCGTGGGAGC
TGATGAACGAGCCCAGATGCATCTCCGATCCGTCTGGTAACACTCTGCAGGTGAGTCGGTCGATGCT--------ACTAT
--ATCGCATTTATTGCCGATCTGCGTCCACGAGCCTGTCCGTGCGAATTTGATGCTGTGCATTTGGGTTTCGGGGTGATT
TGTATACCGTATTCTGATTTGGCT--TTGATGTGGGCAGCGCTGGATCGAGGAGATGGCGGGGTACGTGAAATCGATCGA
CCGTCGGCATCTGCTGACCGTCGGCACGGAGGGGTTCTACGGCCCCACGAGCCCTCCGGAGAAGCTGAGCGTGAATCCGG
GGCACTGGTTCAACAACTACGGCCTCGACTTCATCCGCAACTCCAAGATCTCCGACATCGACTTCGCCTCCGTCCACCTT
TACCCGGACACCTGGTAACCATCCCCATCAACAAATTAGCTACTAC---GAGTACTCTGAATTTGTCGAAGCAGTGGATG
AGACGCCAGCTGAATTGCAGGCTGCTGCACGCGGATCTGGAAGAGAAGCTCAAGTTCGTGACGCAGTGGGTGAGCTCCCA
CTTCGAGGACGGCGACACGGAGCTCGGCGGCAAGCCCGTGGTGCTGACGGAGTTCGGGCTGTCGCATTTGGTCAAGGGCT
TCGAGCAGTCGCAGCGCGACGCCTTCTACAAGTCGGTGTACGACATCGTCCACGCGTCGGCCAAGAGGGGCGGCGCCGGC
GCCGGCGCGATAGTGTGGCAGCTCGCCGCCGAGGACATGGAGGAGTACCACGACGGCTTCGCCATCGTGCCCAGCGAGAC
GCCGTCGATGCAGAAGCTGCTGACGGAGCAGTCGTGCCGGCTGGCCGCGCTGAGGCACGGGGAGGAGGAGGCCAAGAGGA
TCCTCAAGGCGGTGTGCGGCTGA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr3D_1_TraesCS3D01G273400
GCCGCCCAAAATCTTTGTCCATCATGGCAGCTTCGGCGAGGAGGGCGGCTTCTACCTCTCGTTGTCTGAGGAGATCAGCT
TCAGCTTGATGTTCGAGGGAGCCGTGGACGCCGAGGGGTACGAAGACCGTGGGCGGCTATGATAGGATCCGGAGCTCCCC
CCTCGAATCCGTACGAGCGCACCGGGAACGACTTGGAGGCGTCGGACTTGCCCATCGCGGCGGTCGGTGGTGGAGGTGTG
CGGATTTGAGAGAAGAGAGGAGATGCGGCAGTGTGGTGGTGTAGGGCTTGCGTCCGCAATCAACCGACTTAAACAGTTGG
GGGCAGCCGGACAGGCTGGCACTGCTTCAATGCGGGCAACTGCAGGAGTAACCTTCTCGGTCGCCGTGCCGGTCAGCTGA
CATGAATGCGGGTAGGCGACCGTCGGATCACATCCGCTTTGGTCGGCATGAATGCGGGATGAAGGAAGAGAGAGGGGTTT
TGAGTGGGTCCGCGTTATCTCTAATGTGGTAGCGGTCTAACTCCTGCAAACCTTCCCTAGTTGGATAGGAATTTGCGGGA
TTTCGATGTCCAGTTCGGTATGGACAAAATTATTGACAGTGGTTGGATGATCAAAATTGTTGGGACCGTGTGGCCCAGAC
ATTTGCGGGTGATTTGATGATCGGTGCTAGAATCGCTCTAATGAAGAGGGCAAGTTGCACTGGAGGAAATCACATTTG-G
AATTTTATAAAGGTCCTGTAAGCAAAGTAATATCACTAGTCTTCAACCCTACTCCCCGCCGAATATAACTGTTTACCTCG
GGCAAAGCTACCACCACCAGTACCACAGTGTGCAGGT-CCCCCCTCCTGCTTCACGCCTCACCGCCGCTGCCTCCCATCC
CACTAGTCCTACT---CTTCACTCCCGCCTTCTAGAAGTAGAGGCTCCATCCCCCACTCGGAATGGCGCTCCTCTAGCAG
TAGCACCGCAAAAGCTCCCCAAGAACACCCCACCGGCACCAAACAATGGCGGCGTGCAACGGCCTGTTCGTGTACCACAT
CCTCGGCCTGGCCTCCCTGGTGGCCGTCTTCTACTTCTCCCTCCTCGGCGAGGTGGACCTCCGCTTCCCCGGCCTCCTCC
CGTCCTCCGGCGCGTCCCAGCACTCCCACGACGCGTCCCTGCCGTTCGTGGAGCGGCGCGGCGCGCAGCTCTTCCTGGAG
GGCCGCCCGTTCTACATCAACGGGTGGAACTCGTACTGGCTCATGGACCAGGCGGTGGAGCCGGCCAGCCGCCACCGTGT
GTCCGACATGTTCCGCGCCGCCACCGGGATGGGGCTCACGGTGTGCCGCACCTGGGCCTTCAACGACGGCGCCTACAACG
CGCTCCAGCTCTCCCCGGGACACTTCGACGAGCGCGTCTTCAGGGCGCTGGACCTGGTGGTCGTGGAGGCCCGGCGGCAC
GGCGTGCGGCTCGTCCTCAGCCTGGCCAACAACCTGGAGGCGTACGGCGGGAAGACGCAGTACGTGCGGTGGGCGTGGGA
CGAAGGCGTCGGCCTCACCGCCTCCAACGACTCCTTCTTCTTCGACCCCGCCATCCGTGACTACTTCAAAGTCTACCTCA
AGGTAAATT-------AGTTGCAGCATCGTGCCCACAGCATCAAAGTCTAGCTAGTTGATTTTTTGCTGTTATTTTTAGC
ACCCCAATTGACGGG----AAAAAAGTGTCGGTGGCAATTTTATACAGTAGTTAAAGTTGCAAATTTTACTTTGCTTT--
GGTGCAGGCATTGTTGACGAGGACGAACCACTTGACGGGGGTGCAGTACAAGGACGACCCTACCATCTTGGCGTGGGAGC
TGATGAACGAGCCCAGATGCATCTCCGATCCGTCTGGTAACACTCTGCAGGTGAGTCGGTCGATGCT--------ACTAT
--ATCGCATTTATTGCCGATCTGCGTCCACGAGCCTGTCCGTGCGAATTTGATGCTGTGCATTTGGGTTTCGGGGTGATT
TGTATACCGTATTCTGATTTGGCT--TTGATGTGGGCAGCGCTGGATCGAGGAGATGGCGGGGTACGTGAAATCGATCGA
CCGTCGGCATCTGCTGACCGTCGGCACGGAGGGGTTCTACGGCCCCACGAGCCCTCCGGAGAAGCTGAGCGTGAATCCGG
GGCACTGGTTCAACAACTACGGCCTCGACTTCATCCGCAACTCCAAGATCTCCGACATCGACTTCGCCTCCGTCCACCTT
TACCCGGACACCTGGTAACCATCCCCATCAACAAATTAGCTACTAC---GAGTACTCTGAATTTGTCGAAGCAGTGGATG
AGACGCCAGCTGAATTGCAGGCTGCTGCACGCGGATCTGGAAGAGAAGCTCAAGTTCGTGACGCAGTGGGTGAGCTCCCA
CTTCGAGGACGGCGACACGGAGCTCGGCGGCAAGCCCGTGGTGCTGACGGAGTTCGGGCTGTCGCATTTGGTCAAGGGCT
TCGAGCAGTCGCAGCGCGACGCCTTCTACAAGTCGGTGTACGACATCGTCCACGCGTCGGCCAAGAGGGGCGGCGCCGGC
GCCGGCGCGATAGTGTGGCAGCTCGCCGCCGAGGACATGGAGGAGTACCACGACGGCTTCGCCATCGTGCCCAGCGAGAC
GCCGTCGATGCAGAAGCTGCTGACGGAGCAGTCGTGCCGGCTGGCCGCGCTGAGGCACGGGGAGGAGGAGGCCAAGAGGA
TCCTCAAGGCGGTGTGCGGCTGACCCGTGATCTGTCTTGCGAGGTGTGGCTTTTTTGCGTGCTCATGTCATGTA---CTG
TTACTGTGTGTCCGTAGGAAATCGACACGAAATGGACCGAAGGGATCCATGAAAGGTGGCGTGCTCGGCGCCGACGTCGG
CAGATCTGCCTCTGTATTTTCCTTGCTGTGTTGTTGTACTCGTACGTGCCCTTGACCTTTGGTGTTTAAGTCATTGTCGA
GTGGCAGCGGAGGCTAGTTATATTCTATAGTCCTCGAATAGTGTTTTGTCTGCACAAGAGATATTTATATGTACGCCTGT
GTACGCATAAGAAAAATGCAGGCATGTTCCGCATGGAAATGGAGCACCGACGAATCCTTGCTCATTGTGCTTGTG-----
---ATCCAGTGATTGTGGCGAGGCATAGTATTGATTTTCATCCATTTGTGACATCTCATTAAGTAACTCGGCATTGAGCA
TGGACATGAGTGGTTAAATTATTTAACTTAAATATGATGAACTCATCGCTGTTGT-------------------------
------GACCACAAAGAACCAACGGCGTGCTGCAAAATAGGGAGATCAAGCAGGCAGGGGTGCTGCAAAAGGTAAAGACG
ACGACATCCAAGATGGGGGAGGAAGCGTATCGTATTCGTGGCGTGAGGACGAGGGCGAGTGAG-TGGGGAT-ACCGGGAA
AGAATAGCAATGTGATGGCCTAGAGCAGGAAGGGGGACCAACTTGCGACACCCGGATTCACGAGGAAAGAAGTGGTAGCA
GTAGGGCACAATTTCGTGTTTTGACCCTTTTAGATACAAATTCAGGATCTGACCCCGGTTTGAAAAAAATTCGGGATTTG
ACCCTTTTGCTACTGCTAGGGGCTCCGACGGTAGGGTTAGACAGCCTACCGCCAGGGCCTCTGGCGTTAGGGTGCGACGG
AGGGGGACGGCGGCCGTTTGTCTGTGCTGACGTGGATAAGTACCTTATCGCCAGATCCCCTGGCGGTAGGCTGTCCAACC
CTACCACCAAAGCCCCTGGCGGTAAGG
>chr3A_550
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AATTTGCGGGA
TTTCGACGTACGGTTTGGTCCGAACAAAATCGATGACACTCGATGGATGATCAGAAGTGTCTGTACTGTCTGGTCCAAAC
ATTTGCGGGTGATTCGATGATCGTGG-TGGAGTTGCCCTAATGAAGGGGGCAAGTTGGACAGGAGGTAATTACA-ATTAG
AATTCTGTGAAGGTCCTATAAGCAAAGTAATAGCACTAGCCTTCAACCCTACTCCTCGCCGAATATAACTGTTTACCTCG
GGCAAAGCTCCCACCACCAGTGTCACAGTGTGCAGGT-CCCCCCTCCTGCTTCACGCCTCACCGCCGCTGCCTCCCATCC
CACTAGTCCACTCCTACTTCACTCCCGCCTTCTAGAAGTAGAGGCTCCACCCCCCACTCGGAATGGCGCTCCTCTAGCAG
TAGCACCGCAAAAGCTCCCCAAGAACACCCCGCCGGCACCACACAATGGCGGCGTGCAACGGCCTGTTCGTGTACCACAT
CCTCGGCCTGGCCTCCCTGCTGGCCGTGTTCTACTTTTCCCTCCTCGGCGAGGTGGACCTCCGCTTCCCCGGCCTCCTCC
CGTCCCCCGGTGCGTCCCGG---TCCCACGACGCGTCCCTGCCGTTCGTGGAGCGGCGCGGCGCGCAGCTCTTCCTGGAG
GGCCGCCCATTCTACATCAACGGGTGGAACTCGTACTGGCTCATGGACCAGGCCGTGGAGCCGGCCAGCCGCCACCGCGT
GTCGGACATGTTCCGCGCCGCCACCGGGATGGGGCTCACGGTGTGCCGCACCTGGGCCTTTAACGACGGCGCCTACAACG
CGCTCCAGCTCTCCCCGGGACACTTCGACGAGCGCGTCTTCAAGGCGCTGGACATGGTGGTCGTGGAGGCCCGGCGGCAC
GGCGTGCGGCTCATCCTCAGCCTGGCCAACAACCTGGAGGCGTACGGCGGGAAGACGCAGTACGTGCGGTGGGCGTGGGA
CGAAGGCGTCGGCCTCACCGCCTCCAACGACTCCTTCTTCTTCGACCCCGCCATCCGCGACTACTTCAAAGTCTACCTCA
AGGTAAA-CACTGAACAGTTGCAGCATCCTGCCCGGAGCATCAATGTCTAGCTAGCTGATTTCTTTTATG--TTTCTAGC
ATCCCATTGACGGAGAAACAAAAAAGTGTCGGTGGCAATTTT--ACAGTGGTTAAAGTTGCATACTTTTACTTTTGTTTC
GGTGCAGGCATTGTTGACGAGGACGAACCACTTGACGGGGGTGCAGTACAAGGACGACCCTACCATCTTGGCGTGGGAGC
TGATGAACGAGCCCAGATGCATTACCGATCCGTCCGGTAACACTCTGCAGGTGAGTCCATCGATGCT--------ACTAT
CTATCACACTTATTGCCGATCTGCATCTA---------CCGTGCGAATTTGATACTAGATGTAA-CTGTGTTCATTTACT
TTCAAGACATTTTCTGATTTGGTTGCGTGATGGGGGCAGCGCTGGATCGATGAGATGGCGGGGTACGTGAAGTCGATCGA
CCGTCGGCACCTGCTGACCGTCGGCACGGAGGGGTTCTACGGCCCCACGAGCCCGCCGGAGAAGCTGAGCGTGAATCCGG
GGCACTGGTTCAACAACTACGGCCTCGACTTCATCCGCAACTCCAAGATCTCCGACATCGACTTCGCCTCCGTCCACCTT
TACCCGGACACCTGGTAACCATCCCCATCAACAAATTAGCTACTACTACGAGTACTCTGAATTCGTGGAAGCAGTGGATG
AGACGCCAGCTAAATTGCAGGCTGCTGGACGCGAATCTGGAAGAGAAGCTCAAGTTCGTGACGAAGTGGGTGAGCTCCCA
CTTCGAGGACGGCGACACGGAGCTCGGCGGCAAGCCCGTGGTGCTCACGGAGTTCGGGCTGTCGCATTTGGTCAAGGGGT
TCGAGCAGTCGCAGCGCGACGCCTTCTACAAGTCGGTGTACGACATCGTCCACGAGTCGGCCAAGAGGGGCGGCGCCGGC
GCCGGCGCGATAGTGTGGCAGCTCGCCGCCGAGGACATGGAGGAGTACCACGACGGCTTCGCCATCGTGCCCAGCGAGAC
GCCGTCCATGCAGAAGCTGCTGACGGAGCAGTCGTGCAGGCTGGCCGCGCTGAGGCACGGGGAGCAGGAGGCCAAGAGGA
TCCTCAAGGCGGTGTGCGGCTGACCCGTGATCTCTCCTGCGAGGTGTGG-TTTTTTGCGTGCTCCTGTCATGTAGTACTG
TTACTGTATGTCCCTAGGAAATCGACACGAAATGGACCGAAGGGATCCATGAAAGGTGGTGTGCTCGGCGCCGACGTCGG
CAGATCTGTCCCTGTATTTTCCTTGCTGTGTTGTTGTACTTGTAGGTGCCCTTGACCTTTGGTGTTTAAGTCATTGTCGA
GTGGCAGCGGAGGATAGTGATATTCTATAGACCTCGAATAGTGTTTTGTCTGCACAAGAGATATTTATATGTACGCCTGT
GTAAGCATAAGAAAAATGTAGGCATGTTCTGCATGGAAATGGAGCACCGACGAATCTTTGCTCATTGTGCTTGTGATCCA
GACATCCAGTGATTGTGGCGAGGCATTGTATTTCCGC----CCATTTGTGACTTTTCAGTAAGTAACTCGCCATTGAGCA
TGGCCGTGAGTAGTTAAAT--------------ATGATGAACTCATCGCTGTTGT-------------------------
------GACCACAAAGAACCAACG--GCGCAACACAATAGCGAGATCAAGGAGAAACGCATGCTGCAAAAGGTAAAGACG
ACGACATCCAAGATGGGG-AGGAAGCGTATCGTATTCGTGGCGTGAGGACGAGGGCGAGTTAGTTGGGGATAACCGGGAA
AGAATAGCAATGTGATGGCCTATAGCAGGAAGCGGGACCATCTTGAAGCACACGGATCCACGAGGAAAGAAGTGG-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr3B_634
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCCAAAC
ATTTGGGGCTGATTGGATTTTTAGCGCTGGAGTTGCCCTAATGAAGAGGGCAAGTTGGACAGGAGGAAATCATATATTAG
AATTCTATAAAGGTCCTATAAGCAAAGGAGTAACACTAGCCTTCAGCCCTACTCCTCGCCGAATATAACTGTTTACCTCG
GGCAAAGCTACCGCCACCAGTATCACAGTGTGCAGGTCCCCCCCTCCTGCTTCACGCCTCACCGCCGCTGCCTCCCTTCC
CACTAGTCCACTCCTACTTCACTCCCGCCTTCTAGAAGTAGAGGCTCCATCCCCCACTCCGAATGGCGCTCCTCTAGCAG
TAGCACCGCAAAAGCACCCCAAGAACACCCCACCGGCACCGAACAATGGCGGCGTGCAACGGCCTGTTTGTGTACCACAT
CCTCGGCCTGGCCTCCCTGGTGGCCGTGTTCTACTTCTCCCTCCTCGGCGAGGTGGACCTCCGCTTCCCCGGCCTCCTCC
CGTCCCCCGGCGCGTCCCAG---TCCCACGACGCGTCCCTGCCGTTCGTGGAGCGGCGCGGCGCGCAGCTCTTCCTGGGG
GGCCGGCCATTCTACATCAACGGGTGGAACTCGTACTGGCTCATGGACCAGGCGGTGGAGCCGGCCAGCCGCCACCGCGT
GTCGGACATGTTCCGCGCCGCCACCGGGATGGGGCTCACGGTGTGCCGCACCTGGGCCTTCAACGACGGCGCCTACAACG
CGCTCCAGCTTTCCCCGGGACACTTCGACGAGCGCGTCTTCAAGGCGCTGGACCGGGTGGTCGTGGAGGCCCGGCGGCAC
GGCGTGCGGCTCGTCCTTAGCCTGGCCAACAACCTGGAGGCGTACGGCGGGAAGACGCAGTACGTGCGGTGGGCGTGGGA
CGAAGGCGTCGGCCTCACCGCCTCCAACGACTCATTCTTCTTCGACCCCGCCATCCGCGACTACTTCAAAGTCTACCTCA
AGGTAAAACACTAAACAGTTGCAGCATCGTGCCCAGAGCATCAATGTCTAGCTAGCTGATTTCTTTTATG--TTTTTAGC
ATCCCATTGACGGAGAAAC-AAAAAGTGTCGGTGGCAATTTT--ACAGTGGTTAAAGTTGCATACTTTTACTTTTGTTTC
GGTGCAGGCATTGTTGACGAGGACGAACCACTTGACGGGGATGCAGTACAAGGACGACCCTACCATCTTGGCGTGGGAGC
TGATGAACGAGCCCAGATGCATCACCGATCCGTCCGGTAACACTCTGCAGGTGAGTCCATCGATGCTACCCATGGACTAT
CTATCACATTTATTGCCGATCTGCATCTA---------CCGTATGAATTTGATACTAGACGTAAACTGCGATCATTTACT
TGTAAGAATTTTTCTGATTTGGTT--GTGATGGGGGCAGCGCTGGATCGAGGAGATGGCTGGGTACGTGAAGTCGATCGA
CAGGAGGCATCTGCTGACCGTCGGCACCGAGGGGTTCTACGGCCCGACGAGCCCACCGGAGAAGCTCAGCGTGAATCCGG
GGCACTGGTTCAACAACTACGGCCTCGACTTCATCCGCAACTCCAAGATCTCTGACATCGACTTCGCCTCCGTCCACCTT
TACCCGGACACCTGGTAACCATCCCCATCAACAAATTAGCTACTAC---GAGTACTCTGAATTTGT--------TGGATG
AGACGCCAGCTCAATTGCAGGCTGCTGCACGCGAATTTGGAAGAGAAGCTCAAGTTCGTGACGCAGTGGGTGAGCTCCCA
CTTCGAGGACGGCGACACGGAGCTCGGCGGCAAGCCCGTGGTGCTCACGGAGTTCGGGCTGTCGCATTTGGTCAAGGGGT
TCGAGCAGTCGCAGCGCGACGCCTTCTACAAGTCGGTGTACGACATCGTCCACGAATCGGCCAAGAGGGGCGGCGCCGGC
GCCGGCGCGATAGTGTGGCAGCTCGCCGCCGAGGACATGGAGGAGTACCACGACGGCTTCGCCATCGTGCCCAGCGAAAC
GCCGTCCATGCAGAAGCTGCTCACGGAGCAGTCGTGCCGGCTGGCCGCGCTGAGGCACGGGGAGGTGGAGGCCAAGAGGA
TCCTCAAGGCGGTGTGCGGCTGACCCGTGATCTGTCTTGCGAGGTGTGGCTTTTTTGCGTGCTCATGTCATGTA---CTG
TTACTGTGTGTCCGTAGGAAATCGACACGAAATGGACCGAAGGGATCCATGAAAGGTGGCGTGCTCGGCGCCGACGTCGG
CAGATCTGCCTCTGTATTTTCCTTGCTGTGTTGTTATACTCGTACGTGCCCTTGACCTTTGGTGTTTAAGTCATTGTCGA
GTGGCAGCGGAGGCTAGTTATATTCTATAGTCCTCGAATAGTGTTTTGTCTGCACAAGAGATATTTATATGTACGCCTGT
GTACGCATAAGAAAAATGTAGGCATGTTCTGCATGGAAATGGAGCACCGACGAATCCATGCTCACTGTGCTTGTG-----
---ATCCAGTGATTGTGGCGAGGCATAGTATTGGTTTTCATCCATTTGTCACTTTTCAGTAAGTAACTCGCCATTGAGCA
TGACCGTGAGTAGTTAAAT--------------ATGATGAACTCATCGCTGTTGTTACACGCAAAAAAAAAAATCGTCGC
TGTTGTGACCACAAACAACCGTCG--GAGCAACACAATAGCGAGATCAAGCAGACACGCATGCTGCAAAAGGTAAAGACG
A---CATCCAAGATGGGG-AGGAAGCGTATCGTATTCGTGGCGTGGGGACGAGGGCGAGTGAGTTGGGGAT-ACAGGGAA
AGAATAGCAATGTGATGGCCTAGAGGAGGAAGGGGGA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
------S--S-S---S---SS-S-------SSS-----S-S-S----------S--S---SS-S--S--S-------S--
--------------S---------S---S--S-S--S--------------------S--S--------------S-S--
----S------------S--------------S------S---------------S------------------------
----------------------S---------------------------------------------------------
---------SSSS-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
-----S--------------SSS---------------------------------------------------------
--------S--------------------------------------------------------------------S--
---S----------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
-------SS--------------------------S--------S----------S------S--SSSSSSS--------
-S----S-SSSS-S----------------------------SS-----S------------S-S---SSS--SSS----
--------------------------------------------------------------------------------
-----------------------S----------S----------------------SS---------------------
-----S------------------S--S-SSSSSSSSS---------------S--SSS-S-SSSSSS-SSSSSS-S-S-
----SSS-S-S-----------S---S-----S--------------------------------------S--------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-----------S---------------------S----------------------------------------------
---------------------------------------------S--------------------------------S-
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S----------S--------------------------------------------------
---------------------------------S------------------S-S---S-----------S---------
---S-S-----S-------SSSSSSSSSSSSSS-----------------------------------------------
------------------------SS-S--SS--S-----S------------S--S-SS--------------------
------------------S-------------------------------------------------------------
----------------------------------------S----SSS---S-----S-----------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_269
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GAGAAGAGAGGAGATGCGGC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_1750
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CTTTGCTTTGG
TGCAGGCAT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_572
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTGCGGGA
TTTCGATGTCCA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_1956
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TGTCCGTGCGAATTTGATGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_1898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AACACTCTGCAGGTGAGTCG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_3628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------ACGGTAGGGTTAGACAGCCT---------------------------------
--------------------------------------------------------------------------------
---------------------------
