>input_sequence_44866
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--------------------------ATGGAGAATGATGCGTCCTACTTTATGCTAGTGCTAGCTCTGTTTCCTCTTGTG
TACATTATTCGGTTCTACTACCTAGCTTCCTCTCGTTGTCACAACCGTGGCCTACGGCTCCCTCCAGGGCCATGGCAGCT
ACCTGTCATCGGCAGTCTCCACCATCTTTTTGGCGCACTCCCACACCGTGCATTACGAGACCTATCAAGGCGACACGGCC
CTCTCATGCTCCTCATGTTCGGCGCGAACCGTCCGGTCATCGTCGTTTCCACCGCCGAGGCTGCCAAGGAGATGATGAAG
ACGCACGACACCACCTTCTGCGCGAGGCCACTGACCTCAGCTCTCAAGGCCATTAGCAAGCATGGCCTGGGGATCGTCTT
CGCCCCGTACGGTGACCACTGGCGGCAGATGCGCAAGATCTGTTTCCTCGAGCTGCTGAGTGCCAAGCGCATCGCCTCGT
TCGGCTCCATCAGGGGAGAGGAGACGGATAGATTCATCCGGTCCATCTCGGCTACGCTAGAGCCGGTCGTGAATCTGAGC
GAGATGCTGGCGGCGTACCTGACAGACACGACGGTGCACATGATCATGGGTGGACAGTTCACGGAGCAGGACACCTTGCT
CCGACACGTTGATGAGGCCGTAGGGATTGTAAGCGGCGTCGCCCTGCCCGACCTGTTCCCGTCGTCGAGGCTGGCGTGCG
CTCTGAGCACCACACTGCGCAGAGCCGAGGTGTTCCGAGAGGCCTTTTTAGCGTTGATGGGCCATGCCATAGATGATCAT
CTGGAGAGCAGGAGGAGCGCTTCTTCCTCTGAACAAGTAGACCAGGAAGACATCATCGATGTGCTCTTGAGGGTGCAGGG
AGAAGGAAACCTTGAGCCACCCCTCACC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----ATGAACAACATCAAAGCAGTTGTCTTCGTAAGTTGTACTACTACTTTAATATGTCCTAAATTTACAAGCACTAGT
TTCTACGTACTATACTTATTTTGAGACGGAGGGAGTACAACTGAATGTGTGCCGTTATAT----ATGCTTATCCTTTGCA
CAGTATG---TATCAATGCATGGTTTTATTCACTAACACAAGAAAGAATACAATACATACAGGACCTTCTTGCAGGGGGG
ACAGAGACAACATCGACAACGCTACAGTGGGCCATGGCAGAGCTGATGCGAAACCCAAGCATCATGTCAAGGGCGCAAGA
TGAGGTCAGGGGAGCCTTCATGGGACAAAACAAGGTTACTGAAGAGGGTCTAGGTGAGCTGAGCTACTTGCAATGCATCA
TCAAGGAGACATTGCGGCTGCACCCTCCTGGGCCACTAGTACCAAGGGAGTGCAGAGAGGACTGCAGAATACTCGGCTAC
GATGTGCCCAAAGGCACCACCGTTCTCGTCAATGTTTGGGCCATCTCTAGAGACCCGGAATGCTGGGATGAGCCCGAAGA
ATTCGTGCCTGAGAGGTTTGTGGCAAGTGCCAGAGATTTCAAAGGCAACAGCTTTGAGTTCATACCATTCGGCGCTGGTC
GTCGGATTTGCCCCGGGATGCTATTTGGGCTCGCTACTATTGAGCTAGCTCTTGCAAGCCTTCTATTTCATTTTGATTGG
AGTCTCCCGGATGGCACTCTTCCTAGTGAACTGGACATGACAGAAACCATGGGAGTGGCGGCCAGGAAGAAGGTGCCTCT
GTGGTTGCGTCCAAGTCCCCATGTATATTTGCCTTGCTGA----------------------------------------
--------------------------------------------------------------------------------
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---------------
>chr1A_1_TraesCS1A01G020800
GTTCAGTTCTGGCCTCATGTGAATCTATTTTTTTGTC-------------------------------------------
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-------------------------------------------------------------------------CTTCCAC
GTAAGAGATTAGTCCTCCGAGTTTTTTAGCAATTATAATTAGTGCCTAACCGGTATCCAAATCCACGACCGGCCGCGGAA
TCACGCAAGGAAGCCGAGCTTTGCTCGC----------------------TCACCAGATGGTGACCCCGCACCGGCTTCC
TTCATCAATGGCTTGGTCTTCGTCGTTTGCCTGGGAGTGCCACACCACGGTCTGCTCATCATTCATGAAGCCAACTTCAA
AATAAT----TCTGGTGGTTTTTGAAGTCGTTGAAGCAGCCGCGCCGCCCTTGGTTGCATCAGTGTAGCCGACGACACTC
ATCCTGGTGAAGCATGTGCAAATTCATTTGTTATAGGGA-----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGTAGATGCGAGTAGCACTTCATAGATTCCCATTAAAA
TACATATATTTTAATTGAAACTCGGAATTTTTAGCTCTTGCTAAGTCAAAACTTTGGGAAATATGAGATTTGGCCAAAGT
AGGGTTTTAGAAAATTGTTGAGGGTTGGTTCACAAGATGACCTTTGCTGGATTCTCAACACAAGAACAATTCACACAGGA
CCGAACAAAACAATGGGAGAGAAAAAGGTTTTAATTACCATTAAAAAAATTCAAAAGTTTTCTGTTGGTTCCGATTTTTA
GATT-ATAAACATTTTGTAGTCCAAACTTTTGGAATGTGACAGTATGAGTCGGACCAACCAAACATATTTAATAGAATCA
TGTCATGGTGTAATAATCTGATAACAGGGAAGAATTGCGGAACCAAACTTGTTCGTAGTAGTATACTAGTTCCCATAGAT
ACTATACATGGATCGCAACAAGCAAACAAAAAAGAAGCAACCTCTAGTTGACTAGAATCATCCATAAATCCTACTCCCTC
CGTCCCATAACCTAAGACGTTTTTGCAAGAACGTCTTAAAATTCTGAGACGGAGGGAGTACTATATAAGACGGCCGAGTA
GTCACTATAGATTCATAGCTAGCACGATGGAGAATGATGCGTCCTACTTTATGCTAGTGCTAGCTCTGTTTCCTCTTGTG
TACATTATTCGGTTCTACTACCTAGCTTCCTCTCGTTGTCACAACCGTGGCCTACGGCTCCCTCCAGGGCCATGGCAGCT
ACCTGTCATCGGCAGTCTCCACCATCTTTTTGGCGCACTCCCACACCGTGCATTACGAGACCTATCAAGGCGACACGGCC
CTCTCATGCTCCTCATGTTCGGCGCGAACCGTCCGGTCATCGTCGTTTCCACCGCCGAGGCTGCCAAGGAGATGATGAAG
ACGCACGACACCACCTTCTGCGCGAGGCCACTGACCTCAGCTCTCAAGGCCATTAGCAAGCATGGCCTGGGGATCGTCTT
CGCCCCGTACGGTGACCACTGGCGGCAGATGCGCAAGATCTGTTTCCTCGAGCTGCTGAGTGCCAAGCGCATCGCCTCGT
TCGGCTCCATCAGGGGAGAGGAGACGGATAGATTCATCCGGTCCATCTCGGCTACGCTAGAGCCGGTCGTGAATCTGAGC
GAGATGCTGGCGGCGTACCTGACAGACACGACGGTGCACATGATCATGGGTGGACAGTTCACGGAGCAGGACACCTTGCT
CCGACACGTTGATGAGGCCGTAGGGATTGTAAGCGGCGTCGCCCTGCCCGACCTGTTCCCGTCGTCGAGGCTGGCGTGCG
CTCTGAGCACCACACTGCGCAGAGCCGAGGTGTTCCGAGAGGCCTTTTTAGCGTTGATGGGCCATGCCATAGATGATCAT
CTGGAGAGCAGGAGGAGCGCTTCTTCCTCTGAACAAGTAGACCAGGAAGACATCATCGATGTGCTCTTGAGGGTGCAGGG
AGAAGGAAACCTTGAGCCACCCCTCACC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----ATGAACAACATCAAAGCAGTTGTCTTCGTAAGTTGTACTACTACTTTAATATGTCCTAAATTTACAAGCACTAGT
TTCTACGTACTATACTTATTTTGAGACGGAGGGAGTACAACTGAATGTGTGCCGTTATAT----ATGCTTATCCTTTGCA
CAGTATG---TATCAATGCATGGTTTTATTCACTAACACAAGAAAGAATACAATACATACAGGACCTTCTTGCAGGGGGG
ACAGAGACAACATCGACAACGCTACAGTGGGCCATGGCAGAGCTGATGCGAAACCCAAGCATCATGTCAAGGGCGCAAGA
TGAGGTCAGGGGAGCCTTCATGGGACAAAACAAGGTTACTGAAGAGGGTCTAGGTGAGCTGAGCTACTTGCAATGCATCA
TCAAGGAGACATTGCGGCTGCACCCTCCTGGGCCACTAGTACCAAGGGAGTGCAGAGAGGACTGCAGAATACTCGGCTAC
GATGTGCCCAAAGGCACCACCGTTCTCGTCAATGTTTGGGCCATCTCTAGAGACCCGGAATGCTGGGATGAGCCCGAAGA
ATTCGTGCCTGAGAGGTTTGTGGCAAGTGCCAGAGATTTCAAAGGCAACAGCTTTGAGTTCATACCATTCGGCGCTGGTC
GTCGGATTTGCCCCGGGATGCTATTTGGGCTCGCTACTATTGAGCTAGCTCTTGCAAGCCTTCTATTTCATTTTGATTGG
AGTCTCCCGGATGGCACTCTTCCTAGTGAACTGGACATGACAGAAACCATGGGAGTGGCGGCCAGGAAGAAGGTGCCTCT
GTGGTTGCGTCCAAGTCCCCATGTATATTTGCCTTGCTGAAGCATGCATTCATGGTTCTGCATCTGTTCTCTTTGGTTCT
ACTGTAC---TATGTTTTAACTAGCAGCACAGCACGTAGCCCGTGCAATCCTATTCCTGGGCATGTTCTGGTCATTCTGT
TCACAAGTTGTGTTTTGAAATAAAAAAAA---TTGGTTGTTGAGATATTTTTAAACATATATATCTCCTCCT-GCCAAAA
AAACA-TATATGTCTCCTGTGTTAGTTATGGATCTGCAATGTGTTTAGTCCTTAGGGCATCTCCAACCCTGACCCTTATA
TTTCCTTCCGCATCCGTCTGCAGACACGGATGCGGGATCCAGCAATCC---GCTATTCGCATATGTCCGGTTTTATTTTG
GAAGAA-TTTTAAAGAAAAGGAACAAATTTCATGCATATTTGAACGC-----ACAAGATTCATTCATATTGGATGAT---
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTTTACA
TAAAACCGGAT--TTTTCATCAAAATCAAAGCAAATTCATTACATTTAGAACAGTTAGATGTACTGCTTGAATCCATACT
TGTACTCCTTATTTGTTTATGCTTCAACGGGGAGAGGAGAACATTGCTGGTCGTGCATGAGCTTTCATTTACAGCCCATT
TATTTATTCATTTACTTTTGGCGTAAAACATTAGCAGCCAGACTTGAGTAATGTTTCTTTTCCTTTAGACACATAATTTG
TCTTTCTGAATCTATCAGGTATAACAAGGATGTCTATTCAGTTCTTGCATCAAGAGTTACTTGAGATGCATGGTTCGGTA
AACTGACAGAGAACGCCCCTCAGCCTAGTTGAAAGACCCGTGTCACGATGTCGTCGTCGCTAATAATGGAAGCGTGTGAA
AAGAAGCAGATTGGATCTCCCCCTCCTCCTCCCGTGACACTCCTGCAAGCGTCCGGGAGGCTAACCCTAGGGCTTCCGCC
GCCCCTCCTCTCCTCACCCCTCCCTCGCCGCTGCCAGGGGGCCCGCGCGGGCGAAGTCTGTAGATTGTCGGCAGCACTAG
GGCCTCCTTCGTGTA
>chr1D_30
ATGCGCAAATTCATTTGTTATAGGGAAATAGATGAGAATAGCACTTCATAGATTCCCATTAAAATACTTATATGTTAATC
ATATTTTTAGGGGAAGTCCGTTAAACATGTAAAAACTTCCTCGTGAGTCTAGCACTTTTCTTTCTAAAAACTAGTTATAG
AAGGCCTAACTGTGTTTATTTGTTCCCAGCATAATACTCCCTCGTCCGTTTTAGTCTGCATATAAGTTTTGTTTAAAGTC
AAAGTATCTTGAATTTGACCAAACCTATAAGAGAGTATCAACATTCACAATATCATTAGATTCATTATTGAATGTATTTT
CATATCATAAATATATTTTGCATTGTACACGTTGATAATTTTTAATAAAAAATTGGCCAAACTTTGTAAAGTTTAACTTG
ACATAAATCTTATATGCAGAGTTAAAAGGACCGAAGGGAGTATTTGTTTTCTATTCTTCAGCAGCCCATGTTTATATTGA
GCCGTGGCTGTACTTGCAAGTCAAGCCGGCGGCTGGATCACCCCTTGACCGGATCATTCAAAAAGAAGCATGATCAAGTT
CATGCATCTAATTGTTCCTTGCTAACCACCCTCACATGGTTGCCTTCAGTTCCTTCCGAAAAAACTCCATTTGCTGAAAG
CATGATCAAGTCCTTATCGCATTTTAAATACTCCTTGCTAGCCATCCTCACATGATTTGCGTTCAGTTCTGACGTCATGT
GAATTTATTTCCTTTTTTAGTGAGGTGTGCTTCGGTACATCCCCCTTAAAATATTGAAAAGAGTATTTTTGTTCTTCCAC
GTAAGAGATTAGTCCTTCGAGTTGTTTAGCAAT--TAATTAGTGCCTAACCGGTATCCAAACCCACGACGGGCCGCCAAA
TCACGCAAGGAAGCCGAGCTTTTCTCGCCTCAGCCGCCCTCGTTGCTCCTTCACCAGATGGTGACCCCGCACCGGCTTCC
TTCATCAATGGCTTGGTCTTCGTCGTTTGCCTGGGAGTGCCACACCGCAGTCTGCTGGTCATTCATCAAGCCAACCTCAA
AATAACCCCGTCTGGTGGTTTTTGAAGCCGTTGAAGCAGCCACGCCGCCCTTGGTTGCATTAGTGTAGCCGACGACACTC
ATGGTGGTGAAGCATGCGCAAATTCATTTGTTATAGGGGAGTACTCCCTCCGTTCCCAAATATAAGTCTTTTTAGAGATT
CCAACAAGTGACTACATACGGAGCAAAATGAGTGAATCTACACCCTAAAATATGTCTACATACATCCGTATGTTGCAGTC
CATTTGAAATCTCTAAAAAGACTTATATTTAGGAACGGAGGGAGTAGATGAGAGTAGCACTTGATAGATTCCCAATAAAA
TACTTATAATTCAATTGAAACTCGGAATTTTTAGTTCTTGCTAAGTCAAAGCTTTGGGAAATATGAGATTTGGCCAAAGT
AGGGTTTTAGAAAATTGTTAAGGGTTGGTTCACAAGATGACCTTTGGTGGATTTTCAATACAAGAACAATTCACACAAGA
CCGAACAAAACAATGGGAGAGAAAAAGGTTTTAATTACCGCT-AAAAAATTCAAAAGTTTATTGTTGGTTCCCATTTTTA
GATTAAAAAACTTTTCCTAGTGCAAACTTTTAAAATGTGACAGTATGCGTCGAACCAACCAAACATATTTAAGAGAATCA
TGTCATGGTGTAATGATCTGATAACAGGGAAGGATTACT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GGAGGGAGTACTATATAAGATGACCCGGTA
GTCACTACAGATTCATAGCTAGCACGATGGAGGATGACGCATCCTACTTTATGCTAGTGCTAGCTCTGGTTCCTCTTGTG
TACATCATTCGGTTCTACTACCTAGCTTCCTCTCGTTGTCACAACCGTGGCCTACGGCTCCCTCCAGGCCCATGGCAGCT
ACCTGTGATCGGCAGTCTCCACCATCTTTTTGGCGCCCTCCCACACCGTGCATTACGAGACCTATCAAGGCGACACGGCC
CTCTCATGCTCCTCATGTTCGGCACGAACCGGCCGGTCATCGTCGTTTCCACCGCCAAGGCTGCCAAGGAGATGATGAAG
ACGCACGATACCACCTTCTGCGCGAGGCCACTGACCTCAGCTCTCAAGGCCATTAGCAAGCATGGCCTGGGGATCGTCTT
CGCCCCGTACGGTGACCACTGGCGACAAATGCGCAAGATCTGCTTCCTCGAGCTGCTGAGTGCCAAGCGCATCGCCACGT
TCAGCTCCATAAGGGGAGAGGAGACGGACAGATTCATCCGGTCCATCGTGGCAACGCTAGAGCCGGTCGTGAATCTGAGC
GAGTTGCTGGCGGCGTACCTGACAGACACAACGGTGCACATGATCATGGGTGGACAGTTCACGGAGCAGGAGACCTTGCT
CCGGCACGTCGACGAGGCGGTGGGGATTGTAAGCGGCGTCGCCCTGCCCGACCTGTTCCCGTCGTCGAGGCTGGCGCGCG
CTCTGAGCACCACACTGCGCAGTGCCGAGGTGTTCCGAGAGGCCTTTTTAGCGTTGATGGGCCATGCCATAGATGATCAT
CTGGAGAGCAGGAGGAGCGCTTCTTCCTCTGAACAAGTAGACCAGGAAGACATCATCGATGTGCTCTTGAGGGTGCAGGG
AGAAGGCAACCTTGAGCCACCCCTCACC----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----ATGAACAACATCAAAGCAGTTGTCTTCGTAAGTTGTACTACTACTTTATTCTGTCCTAAATTTACAACTACTAGT
TTGCGACGAC---ACTTATTTTGGGATGGAGGGAGTACAACTGAATGTGCGCCACTATATATGGATGCTTATCTTTTGTA
CAGTATG---TATCAATCCATGGTTTCATTCACTAACACAAGAAAGAATACAATACATACAGGACCTTCTTGCAGGGGGG
ACAGAGACAACATCGACAACGCTACAGTGGGCCATGGCAGAGCTGATGCGAAACCCAAGCATCATGACCAGGGCGCAAGA
TGAGGTCAGGGGAGCCTTCATGGGACAAAACAAGGTCACTGAAGAGTGTCTAGGTGAGCTGAGCTACTTGCAATGCATCA
TCAAGGAGACCTTGCGGCTGCACCCTCCTGGGCCGTTAGTACCAAGGGAGTGCAGAGAGCAGTGCAGAATACTCGGCTAC
GACGTGCCCAAAGGAACCACCATTCTCGTCAATGTTTGGGCCATCTCTAGAGACCCGGAATGCTGGGATGAGCCCGAAGA
ATTCGTGCCAGAGAGGTTTGTGGCGAGTGCCAGAGATTTCAAAGGCAACAGCTTCGAGTTCATACCATTCGGCACCGGTC
GTCGGATCTGCCCCGGGATGCTGTTTGGGCTTGCTACTATTGAGCTAGCTCTTGCAAGCCTTCTGTTTCATTTTGATTGG
AGTCTCCCTGATGGCACTCTTCCTAGTGAACTGGACATGACAGAAACCATGGGAGTGGCGGCTAGGAAAAAGGTGCCTCT
GTGGTTGCGTCCAACTCCCCATGTATATTTGCCTTGCTGAATCATGCATGCATGGTTCTGCATCTGTTCTCTTTGGTTCT
CTTGGGAGTGAG-------------AGCACAGTACGTAGCCCGTGCAATCCT------GGACATGTTTTTGCCATTCTGT
TCACAAGTTGTTTTTTTGAAATAAAATTAAACTTGGTTATTGAGATATCTTTAAACATATATATCTCCTCCCCGCAAAAA
AAACCGTATATATATCTTGT----GTTATGGATCTGCAATGTGTTTAGTCCATAGGGCATCTCCATCCCTGACCCCCAAA
TTTCCTCCCGCAGCGGTTTGTGGACACGGATGCGGGAGCCGGTCATCCAATGCTATCCGCATA-----------------
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---------------
>chr1B_917
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----------------------TTGCAAGAACGTCTTAC-ATTATGAGACGGAGGGAGCACTATATAAGACGGCCTGGTA
GTCACTACTGATTCATAGCTAGCACGAAGGAGAATTATCCATCCTACTTTACGCTAGTGCTAGCTCTGGTTCCTCTTGTG
TACATCATTCGGTTCTACTACCTAGCTTCCTCTCGTTGTCGCAATCATGGCCTACGGCTCCCTCCAGGCCCATGGCAGCT
ACCTGTCATCGGCAGTCTCCACCATCTTTTTGGCGCCCTCCCACACCGTGCATTACGAGACCTATCAAGGCGACACGGCC
CTCTCATGCTCCTCATGTTCGGCGCGAACCGGCCGGTCATCGTCGTTTCCACCGCCGAGGCTGCCAAGGAGATGATGAAG
ACGCACGATACCACCTTCTGCGCGAGGCCACTGACCTCAGCTCTCAAGGCCATTAGCAAGCATGGCCTGGGGATCGTCTT
CGCCCCGTACGGTGACCACTGGCGGCAGATGCGCAAGATCTGTTTCCTCGAGCTCCTGAGTGCCAAGCGCATCGCCTCGT
TCGGCTCCATCAGGGGAGAGGAGACGGACAGATTCATCCGGTCCATCTCGGCTACGCCAGAGCCGGTCGTGAATCTGAGC
GAGATGCTGGCGGCGTACCTGACAAACACCACGGTCCACATGATCATGGGTGGACAGTTCACGGAGCAGGACACCTTGCT
CCGGCACGTCGACGAGGCGGTGGGGATTGTAAGCGGCGTCGCCCTGCCCGACCTGTTCCCGTCCTCGAGGCTGGCGCGCG
CTCTGAGCACCACAGTGCGCAGAGCCGAGGTGTTCCGAGAGGCCTTTTTAGCGTTGATGGGCCATGCGATAGATGATCAT
CTGGAGAGCAGGAGGAGCGCTTCTTCCTCTGAACTAGTAGAACAGGAAGACATCATCGAGGTGCTC--------------
-------AACCTTGAGCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGATGAACAACATCAAAGCAGTTGTCTTCGTAAGTTGTACTACTACTTTATTCTGTCCTAAATTTTAAACTACTAGT
TTGCG---AC---ACTTATTTTGCAACCGAGGGGGTACAACTGAATATGTGCCGTTATAT----ATGCTTATCTTTTGTA
CAGTACTATATACCAAACCATGGTTTTATTGACTAACACAAGAAAGAATACAATACATACAGGACCTTCTTGCAGGGGGG
ACAGAGACAACATCGACAACGCTACAGTGGGCCATGGCAGAGCTGATGCGAAACCCAAGCATCATGTCGAGGGCCCAAGA
TGAGGTCAGGGGAGCCTTCATGGGACAAGACAAGGTTACTGAAGAGGGTCTAGGTGAGCTGAGCTACTTGCAATGCATCA
TCAAGGAGACATTGCGTCTGCACCCTCCTGGGCCATTAGTACCAAGGGAGTGCAGAGAGCACTGCAGAATACTCGGCTAC
GACGTGCCCAAAGGCACCACCATTCTTGTGAATGTTTGGGCCATCTCTAGAGACCCGGAATGCTGGGATGAGCCTGAAGA
ATTCGTTCCAGAGAGGTTTGTGGTGAGTGCCAGAGATTTCAAAGGCAACAGCTTCGAGTTCATACCATTCGGCGCCGGAC
GTCGGATTTGCCCCGGGATGCTATTTGGGCTCGCTACTATTGAGCTAGCTCTTGCAAGCCTTCTGTTTCATTTTGATTGG
AGTCTCCCGGATGGCACTCTTCCGAGTGAACTGGACATGACAGAAACCATGGGAGTGGCGGCTAGGAAGAAGGTGCCTCT
GTGGTTGCGTCCAACTCCCCATGTATATTTGCCTTGCTGAATCATGCATGCATGGTTCTGCATCTGTTCTCTTTGGTTCT
ACTATAGTAGTATGTTTTAACTAGCAGCACAGTACGTAGCTCGTGCAATCCT------GGGCATGCTTTTGTCATTCTGT
TCACAAGTTGTGTTT-TGAAATAAAATTAAACTTGATTCTTGAGATATCTTTAAACGTATATATCTCCTCCCCGCAAAAA
AAACA-TATATATCTCTTGT----GTTATGGATCTGCAATGTGTTTAGTCCATAGTGCCTCTCCATCCCTGACGCCGAAA
TTTCCTCCCGCACCTGTTCTT--------------GAGCCGGCCATCCAATGCTATCCGCATATGTCCGGTTTCATTTTA
GAATTTTTTTTATCAAAAATGAACCAATTTGATGCATATTTGAACGCACCGGACAATATTCATTCATACTTGGATGATTT
TGGGAAATAAAATTTGGCTCCCAGGGCCATTTTTTTCAAATGTAAAAAAAATGTGACAAACCCTTTTTGTGATCTTTGTC
ACATAAAAATGCTACCTATAAGCATTTTGCCTTGCGCCAAAAAAAATCGAAGACCAAATGTCACCCCAAATTAGTTTTTT
TCACCGATGAAACACCGCTGCTCCGCTCCGCGTAAAAATTATCAAGCATGCTAGCGGCACCAAAATGATCATCTACAAAA
ATTTTCAGATTTTTTCAAAAACATATACTATTTGTTTGGGTATTGTTCACCCGGGAGCCAAAATGCCGTTCCATTTTACA
TAAAACCGGATGCTTTTCATCTAAATCCAAGCAAATTCATTACATTTGGACAAGTTTGTTGTACTGCTTGAATCCATACT
TGTACTCCTTA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>SNPs
S-S-SSSSS-SSSS-SS-SSS-SSSS-S-SSS-SSSS-------------------------------------------
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----------------S------S---------SS--------------------------S-------S------SS--
----------------------S---------------------------------------------------------
----------------------------------------------S-S-------SS--------S--------S----
-----S---------------------S-------------S------------------S-------------------
--SS------------S---------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------S-----------S-----
---S----S--S----------------------S---------------S-----------------------------
-------------------S--------------------------S------S----S------------------S--
---------------------------------------SS-S-----------------SS----------S-------
------S----S---SS----S---------SS--------------S----S-------------------S-------
--------------S-----------------S---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS----------------SS---S-------------------------------SS---
-------S--------------------------------S---------------------------S-----------
-----S--------------------------------------------------------------S-----------
------------------------------------S-------------------------------------------
-------------------------------S------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
-----------------------------S--------------------------------------------------
---S-----S--S-----S--S------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-S----------------SS------
--SSSSSS--SSS----------S-------------------------------------------------S----S-
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-----------------------------------S-----------------------S--------------------
--S------------------S----------------------------------------------------------
---------S--------------S-----------------------------S--------------------S----
----------------------------------------------------------------S---------------
--------------------------------------------------------------S-----------------
--------------S--------------------------S-------S------------------------------
------S-------------------------S-------------------SSSSSS---------S-S----------
----------------SS--SS----SS----------S---------S----------------------S---S----
-----------S----S---SSSS---------------------------S-------------S---------SS-S-
------S-----S-S--S--SS---------------S--S--S------------S----------------S-----S
---SSS------SSS----S----S-----S-------------------------S-----------S-S-SSSSS---
--------------------------------------------------------------------------------
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---------------------S-----S-------------------S--SS----S-S---------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS
>forward_1846
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------------------------------------------------------------------AATCCTACTCCCTC
CGTCCC--------------------------------------------------------------------------
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>reverse_4136
--------------------------------------------------------------------------------
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-------------------------------------------------------CCTGGGCATGTTCTGGTCAT-----
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---------------
