>input_sequence_44846
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------ATAGGGAATAGGTAGCCCAATAACAGATCCGATCCGCCTCC--GCCTCGCGTTCCACTA
CCCGGCCTGTCGCCTAGTCTTCTCCCCCAAATCTCTCTCTCAAACCCTACAGCCGATCCAGCCCTC-CCCACCGCGCCGA
TCGCCATGGCCGCCCCCAACAACGACCCCGCCGCCGCCAGCGCCAGCGCCTCCACCAGCGACGCCGCCCTCGCCGCGCCG
GAGGACACCTCGATCGAGGCGCTGGCGCGGCGCGTGCAGGAGCACATGACCCTCGCCAACAACCCCACCGCCCGCCGCCA
CAAGTTCTGGGAGACGCAGCCCGTGGGCCAGTTCGGCGACGTCGCCGACGTCTCCCTCCCCGACGGCGCCATCGAGCCGC
CCTCCCCGCTCTCCGAGGTCCGCGCCGACCCCTACCCGCTCCCCGCCGCCTTCGAGTGGTTCACCTGCGACCTCGACGAC
GACGCCCTCCTCGCCGACCTCTACGCCCTCCTCGCCCACAACTACGTCGAGGACGACGAGAACATGTTCCGCTTCAACTA
CTCCCCGGCCTTCCTCCGCTGGGCGCTCCGCCCCCCCTCCTTCTTCCGCGCCTGGCACATTGGCGTCCGGGCCAAGGAGT
CCAAGAAGCTCGTCGCTTTCATATCCGGCGTCCCCGCGCGCATCCGTGCGCGCGACGACGTTGTCCGCATGGCCGAGATC
AACTTCCTCTGCGTCCACAAGAAGCTCCGATCCAAGCGCCTCGCGCCAGTGCTCATCCGGGAGGTCACCCGTCGCGTCCA
CCTGGAGAACATCTGGCAGGCTGCCTACACTGCGGGCGTCGTCCTCCCGACCCCCATCACCACCTGCCGCTACTGGCATC
GATCCCTCAACCCAAAGAAGCTCATCGACGTTGGCTTCTCCCGTCTTGGTCCCCGCATGACCATGAGCCGCACGGTCCGG
CTCTACAAGCTGCCTGATGCGCCGCTTACCCCCGGGTTCCGCCAGATGGAGTTGCGGGATGTTGCAGCAGTCACACGCTT
GCTCAGGGCATACCTTGCAAGGTACGTGGTGGCTCCAGATTTTGATGAGCTTGATGTTGAGCACTGGTTGCTGCCCCAGG
AGGATGTGGTGGACAGCTACCTTGTGGAGAGCCCTGAGACGCACGAGGTCACGGATTTCTGCAGCTTTTACACTCTGCCC
TCCTCCGTGCTGAACAATGCCAACTACTCAACACTCAAGGCCGCATACTCATATTACAATGTTGCTGTCAAGACCCCGTT
GCAGCAGCTGATGAATGATGCACTGATTGTGGCCAAGCAGAAGAACTATGATGTGTTCAACGCGCTCGATGTCATGGAGA
ACGAGGGGTTCCTCAAGGAGCTCAAGTTTGGCCCTGGAGATGGGCAGCTGCACTATTATCTCTACAATTATCGCATTCGC
AATGGAATTAAGCCATCTGAGCTTGGGCTTGTGCTTCTATAGGGTGGTCGAGGCTCAGGATGGTGTTTGGGTTATACTCT
TTTCAGCAGGTACTCCTTGTGTGGCTGGTTTAGTATGCGTCTTTCCTGGTTGCTACAGGTGATGGTTTGATTTCGGTCAT
GCTGTATGTTGCCCAGTGTGCAATCCGTCATAGCTCTTTTGTTTATTGTGGTAGCAAATCTTCCATGCCTTTTCATGGGA
ATCCACATTGATTTGCAAATGAGGA---GACTGGAATTAGAAATTCCTTTTCAATTT-AA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G252300
AGACACGGACTGGCCCACATGGGGCACGAGGCGCCGCCATCTTACATGCCCTGCTCTTCCTCGTCGGAACCCATGACCTG
AACGTCACCGGTCGAGGTGAGGTCTATGATAGACGTGGACGGGCGGGCCTCATCCAAGGTGGTTGTGCGACTCCGGCTCC
GCGCCCTCTGTCGTGAGGGCTGGCATGGCCTCCCTCGTCCTCTGCCTCGCACTGCGGCACGCCTCACATCCACAACCCAA
CACCTCGACTCCATAGCGGTCGGGTCGTGAGGGAAGCCACCATTGACCTCCGACTCGGAGCCCGACGCCGTGGGAACACC
GTACCATTGGAGGGGTTGCGGCACCAGGCAGCAGTCACTGCCTTTGGCGAAGCCGTGTTCACGTGCCTCGAGCCTCCAGC
GCCGGCATATCCAAGCACCATTTGAGCGGTCGGGCGCACTCCTCACGGGAGCGGCGGAGAGCCATGCGGACGACCGTCTC
CTC------CACGCAAGGGACAAGGCCATAGTTGACGGATCG-GGGATCTCGGAGTCAGATCCACTGCCCGACATGTCCA
AGACGACCGGAGTTCACCGGAGAGGAGCTTGGGGATGAAGGGGATTGGAGAGGAATGGAGTGACTGGGGTTTGATCCGGA
GTGCGGATATGGATGAATATATGTGGGGTCGAAGTGGGTGATGGTGGGCCTGATCCGACTTGACGGACGCATCTAAGCGT
CATTATATCTGCCCCAATTATAAACTACATATGAGAGGTGCTGGTCAGCTCAGGCGTTTGAGCCAGGTTTGCCATATCCG
ACTATGTGACATATTTTTGTCCAGGCCGAGTCCGGGCGTTTAGGACCTTTACGAAGGCTCGGTTCGGTTGTAGATTCTCT
TAATTCAAAGTGT------------------------------------------TGTATAGAGACTCTTATTTGTGGTT
TTCTTCCGG-TTGTAATAACGCGTGACGTGGAGAGAAACCTTAAAGAAAAGGAGAGGAGAA--------TATAAATAAAC
GTATCCTTGGTACGCTT---AATAGGGAATAGGTAGCCCAATAACAGATCCGATCCGCCTCC--GCCTCGCGTTCCACTA
CCCGGCCTGTCGCCTAGTCTTCTCCCCCAAATCTCTCTCTCAAACCCTACAGCCGATCCAGCCCTC-CCCACCGCGCCGA
TCGCCATGGCCGCCCCCAACAACGACCCCGCCGCCGCCAGCGCCAGCGCCTCCACCAGCGACGCCGCCCTCGCCGCGCCG
GAGGACACCTCGATCGAGGCGCTGGCGCGGCGCGTGCAGGAGCACATGACCCTCGCCAACAACCCCACCGCCCGCCGCCA
CAAGTTCTGGGAGACGCAGCCCGTGGGCCAGTTCGGCGACGTCGCCGACGTCTCCCTCCCCGACGGCGCCATCGAGCCGC
CCTCCCCGCTCTCCGAGGTCCGCGCCGACCCCTACCCGCTCCCCGCCGCCTTCGAGTGGTTCACCTGCGACCTCGACGAC
GACGCCCTCCTCGCCGACCTCTACGCCCTCCTCGCCCACAACTACGTCGAGGACGACGAGAACATGTTCCGCTTCAACTA
CTCCCCGGCCTTCCTCCGCTGGGCGCTCCGCCCCCCCTCCTTCTTCCGCGCCTGGCACATTGGCGTCCGGGCCAAGGAGT
CCAAGAAGCTCGTCGCTTTCATATCCGGCGTCCCCGCGCGCATCCGTGCGCGCGACGACGTTGTCCGCATGGCCGAGATC
AACTTCCTCTGCGTCCACAAGAAGCTCCGATCCAAGCGCCTCGCGCCAGTGCTCATCCGGGAGGTCACCCGTCGCGTCCA
CCTGGAGAACATCTGGCAGGCTGCCTACACTGCGGGCGTCGTCCTCCCGACCCCCATCACCACCTGCCGCTACTGGCATC
GATCCCTCAACCCAAAGAAGCTCATCGACGTTGGCTTCTCCCGTCTTGGTCCCCGCATGACCATGAGCCGCACGGTCCGG
CTCTACAAGCTGCCTGATGCGCCGCTTACCCCCGGGTTCCGCCAGATGGAGTTGCGGGATGTTGCAGCAGTCACACGCTT
GCTCAGGGCATACCTTGCAAGGTACGTGGTGGCTCCAGATTTTGATGAGCTTGATGTTGAGCACTGGTTGCTGCCCCAGG
AGGATGTGGTGGACAGCTACCTTGTGGAGAGCCCTGAGACGCACGAGGTCACGGATTTCTGCAGCTTTTACACTCTGCCC
TCCTCCGTGCTGAACAATGCCAACTACTCAACACTCAAGGCCGCATACTCATATTACAATGTTGCTGTCAAGACCCCGTT
GCAGCAGCTGATGAATGATGCACTGATTGTGGCCAAGCAGAAGAACTATGATGTGTTCAACGCGCTCGATGTCATGGAGA
ACGAGGGGTTCCTCAAGGAGCTCAAGTTTGGCCCTGGAGATGGGCAGCTGCACTATTATCTCTACAATTATCGCATTCGC
AATGGAATTAAGCCATCTGAGCTTGGGCTTGTGCTTCTATAGGGTGGTCGAGGCTCAGGATGGTGTTTGGGTTATACTCT
TTTCAGCAGGTACTCCTTGTGTGGCTGGTTTAGTATGCGTCTTTCCTGGTTGCTACAGGTGATGGTTTGATTTCGGTCAT
GCTGTATGTTGCCCAGTGTGCAATCCGTCATAGCTCTTTTGTTTATTGTGGTAGCAAATCTTCCATGCCTTTTCATGGGA
ATCCACATTGATTTGCAAATGAGGA---GACTGGAATTAGAAATTCCTTTTCAATTT-AAGACTGTATTTTTCAATTAGT
TACATTCAGTGTGTATGGTTCAAAGCATTTTTATGATGGCACTCAGTTTACCAAGGAATTTT-GATAGACTTGTGTTATG
CTAAATCATTCGAGTACCCTTGTGTTTTGAGCTTAT-ACTATGTGGCTTTGTCAATTCATGACATTCACCATTGTTTCAT
CTAGAATACCCCAAAATT------------------------TGTATTACTTGTTTTTACGGATAGTAGCCTAATGCTGC
TATCATATGAGGTCGGTTCATGATGTTTGATGACTTGGATG---------------TTCTTATTAGGCCCTTTT--TTTT
GTATCAGTAATGTTTGGTGCATCATTGCATCAATAAGCCTCTTTGTCAATCTTGTGGCATCCTCTCCCTCCTTTTCTTTT
TC---------TGCCCTGTCTTCAAATCACTGCATTTGTGCACTTATTGTTAACTTCCTCGCTCTCTCTGTTTGAAACAC
A----GTCATCTTTGGTCATTCTGACATTACATAGAACAAGGCACCTTGTTAGATGTCAGCCGATGTTTTACATCATTTA
GTTGCCCAATTAGATTGTGTGCCTAAACTCATCGCATTCCTGGCCTGGAATGATAAGCGAAAACAGCCCAACAAAAAGGT
TGATTATAGGTTTCAAATCCAAGT--------------------------------------------------------
--------------------TACCATTCTGTCAAATGGTATTCATGGTGGTTGCAAAAGTACCAACAGAGTTCCCTTGCA
AACCCTGGAGTTCTTCCAATCTGTGGCCAGACACTAATTGGCTTGGACTTCATGGAACTTCCTCTGATGAGTGAAGTGCC
AGTCCTGTCGTGGACCGGCTCCGAAATCTTGAGTTCCTCCATGCTTCTTCTTTTATTATTAGTCAATATAGTCTCAAAAG
TCCAGTTCCTGTTTCTTGGATCAACGGAACTCATCCAAAAAGCTGGATGAATGATCAGACGGATTTGGTTTCCAAATCTT
CTTTCAGCCGGCAAGCTCTTGGTTCTTCAAATATTTGCCTCCACAGGGTTGTTGGCATGCATTCCCTTTCTC
>chr3B_1
AGACACAGACTGGCCCACATGGGGCACGAGGCCCCACCATCTTACATGCCCTGCTCTTCCTCGTCGGAACCCGTGACCTA
AACGTCGCCGGTTGAGGTGAGATATATGATAGACATGGACGGGCGTGGCTCATCCAAGGTGGTTGTGCGACTCTGGCTCC
GCGCCCTCTGTCATGAGGGCTGCCGTGGCCTCCCTCGTCCTCTACCTCGCACTGGGGCATGCCTCGCGTCCACAACACAA
CGCCTCGACTCCACAACGGACGGGTCGTGAGGGAAGTCACTATTGACCTCCGACTCGGAGCCCAACGCTGTGGGAACACC
GCACGATTGGAGGGGTTGCGGCACCAGGCAGTGGTCGTTGCCTTCGGCGAAGCCGCATTCACGTGCCTCGAGCCTCTAGC
GTCGGCGGATCCAAGCGCCATTTGAGAGGTCGGGCGCACTCCTTCCGGGAGCGACGGAGAGCCATGTGGACAACCATCTC
CTCACCGACCACGCAAGGGACAAGACCCCAGTTGATGGATCGAGGGATCTCGGAGTCAGATCCACTGCCCGACATGTCCG
AGACGGTCGGAGTTCGCCGGAAAGGAGCTTGGGGATGAAGATGATCGGAGCGGAATGGAGTGACTAGGGTTTGATCCGGA
GTGCGGATATGGATAAATATATGTGGGATCGTAGTGAGTCATGGTAGGCCTGATCCGACGTGACGGACACATCTGAGCAT
TCTTTC--------CAGTTATGGACTGCATACAAGAGGTGCCGGTCAGCCCAGGCGTTTGGGCCAGGTTTGCCATATCCG
AATATGTGACATATTTTTGTCCAGGCCGAGTCCGGGCGTCTAGGACCTTCACGAAGA----GTTCGGTTGCAGATGCTCT
TAATTCAAAGTGTCTTCACGAAGAGTTCGGTTGCAGATGCTCTTAATTCAAAGCTTGTATAGGGACTCTTATTTGTGGTT
TTCTTCCGG-TTGTAATATCGCGTGTTGTAGAGAGAAACCATAAATAGAAGGAGAGGAGAA--------AATAAATAAAC
GTATCTTTGGTACGCTT---AC----GAATAGCTAGCCCAATAACAGATCCGATCCGCCCCCTGGCCTCGCGTTCCACTA
CCCGGCCTGTCGCCTAGTCTTCTCCCCCAAA--TCTCTCTCAAACCCTACAGCCGATCCAGCCCTC-CC-ACCGCGCCGA
TCGCCATGGCCGCCCCCAACAACGACCCCGCCGCCGCCAGCGCCAGCGCTTCCACCAGCGACGCCGCCCTCGCCGCGCCG
GAGGACACCTCGATCGAGGCGCTGGCGCGGCGCGTGCAGGAGCACATGACCCTCGCCTCCAACCCCACCGCCCGCCGCCA
CAAGTTCTGGGAGACGCAGCCCGTGGGCCAGTTTGGCGACGTCGCCGACGTCTCCCTCCCCGACGGCGCCATCGAGCCGC
CCTCCCCGCTCTCCGAGGTCCGCGCCGACCCCTACCCGCTCCCCGCGGCCTTCGAGTGGTTCACCTGCGACCTCGACGAC
GACGCCCTCCTCGCCGACCTTTACGCCCTCCTCGCCCACAACTACGTCGAGGACGACGAGAACATGTTCCGCTTCAACTA
CTCGCCGGCCTTCCTCCGCTGGGCGCTCCGCCCCCCCTCCTTCTTCCGCGCCTGGCACATTGGCGTCCGGGCCAAGGAGT
CCAAGAAGCTCGTCGCTTTCATATCCGGCGTCCCCGCGCGCATCCGTGCGTGCGACGACGTTGTCCGCATGGCCGAGATC
AACTTCCTCTGCGTCCACAAGAAGCTCCGATCCAAGCGCCTCGCGCCGGTGCTCATCCGGGAGGTCACCCGTCGCGTGCA
CCTGGAGAACATCTGGCAGGCTGCCTACACTGCGGGCGTCGTCCTCCCGACCCCCATCACCACCTGCCGCTACTGGCATC
GATCCCTCAACCCGAAGAAGCTCATCGACGTTGGCTTCTCCCGTCTTGGTCCCCGCATGACCATGAGCCGCACGGTCCGG
CTCTACAAGCTGCCTGATGCGCCGCTTACCCCCGGGTTCCGCCAGATGGAGTTGCGGGATGTTGCAGCAGTCACACGCTT
GCTCAGGGCATACCTTGCAAGGTACGTGGTGGCTCCAGATTTTGATGAGCTTGATGTTGAGCACTGGTTGCTGCCCCAGG
AGGATGTAGTGGACAGCTACCTTGTGGAGAGCCCTGAGACGCACGAGGTCACAGATTTCTGCAGCTTTTACACTCTGCCC
TCGTCCGTGCTGAACAATGCCAACTACTCAACACTCAAGGCCGCATACTCATATTACAATGTTGCTGTCAAGACCCCATT
GCAGCAGCTGATGAATGATGCACTGATTGTGGCCAAGCAGAAGAACTTTGATGTGTTCAACGCGCTCGATGTCATGGAGA
ACGAGGGGTTCCTCAAGGAGCTCAAGTTTGGCCCTGGAGATGGGCAGCTGCACTATTATCTCTATAATTACCGCATTCGC
AATGGAATCAAGCCATCTGAGCTTGGGCTTGTGCTTCTATAGGTTGGTCGAGGCTCAGGATGGTGTTTGGGTTATACTCT
TTTCAGCAGGTACTCCTTGTGTGGCTGGTTTAGTATGCGTCTTTCCTGGTTGCTACAGGCGATGGTTTGATTTCCGTCAT
GCTGTATGTTGCCCAGTGTGTGATCCGTCATAGCTCTTTTGTTTATTGTGGTAGCAAATCTTCCATGCCTTTTCATGGGA
ATCCACAGTGTTTTGCAAAT---GA---GACTGGAATTAGAAATTCCTTTTCAATTTTAAGACTGTA-TTTTCAATTAGT
TACATTCAGTGTGCACGGTTCAAAGCAT-TTTATGATGGCACTCAGTTTACCAAGGAATTTT-GATAGACTTGTGTTATG
CTAAATCATTTAAGTGCGCTTGTGTTTTGAGGTTATAACTATGTGGCTTTGTCGATTT---------------GTTTCAT
CAAGAATGCTCAAAAATTTGATGTCCTTGTGGTATGCAAATCTGTATTAATTGTTTTTATGGATTGTAGCCTAATGCTGC
TATCATGTGAGGTGGGTTTATGATGCTCGATGACTTGGATGAACAGCTAAAACATATTCTTATTAGGCCATTTCTGTTTT
CTATCAGTAACGTTTGGTGCATCATTGCATCAATATGCCACTTTGTCAATCTTGTGGCATCCTCTCCCTCTC--------
--------------------------------CATCTGTGCACTTGCTGTTAAATTCCTAGCTTTCTCTGTTCGAGACAC
ACATCGTCATCTTTGGTCATTCTGACATTACATAGTCTAAGGCACCTTGTTATATGTTAGCTGATGTTC-ACATCATTTA
GTTGCCCAATTAGATTGTGTGCCTAAACTCATCGTATTTCTGATCTGGAATCATAAGTGAAAACAGCCCAATAAAAAGGT
TAATTGGG--TTTCGCATCCAAATTACTCCCTCTGCAAGGAAATACAAGGTCGTTTAGATCAAGTGATCTAAACGATCTT
ATATTTCCTTGCAGAGGGAGTACCATTCTGTCAAATGGTATTCATGGTTGTTGCAAAAGTGCC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr3A_435
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CGCACTCCTCCCGGGAGCAACGGAGAGCCATGCAGACGGCCATCTC
CTCACCGGCCACGCAAGGGACAAGGCCCTAGTTGACGGATCAGAGAATCTCGGAGTCAGATCCACTGCCTGACACGTCTG
AGACGGTCGAAGTTCGCCGGAGAGGAGCTTGGGGATGGTGAGGATTGGAGCGGAATGGAGTGAATATGGTTTGATCTGAA
GTGTAGATATTGTTGAATATATGTGGGGTCGGAGTGGGTCATGATGGGCCTAATCCGACGGGACGAACGCATCTGAGCGT
CCTTATATCCACTTCAGTTATGGGCTGCATACGAGAGGTGTTCGTTAGCCCAGGCGTTT--GCCAGATTTGTCATATCCA
ACCACGTGACATATTTTTGTGCAGGCCGAGTCCGGGCGTTTAGGACCTTTATGAAGA----GTTCGGTTGTAGATGCTCT
TAATTCAAAGTGT------------------------------------------TGTATACATATTCTTATTTGTGGTT
TTCTTCCGTTTTGTAATATCGCGTGATGTAGAGAGAAACCTTAAAGAAAAAGGAGAAGAGAAAATACCCAATAAATAAAC
GTATCCTTGGTACGCTTACGAATAGGGAATAGGTAGCCCAATAACAGATCCGATCCGCATCC--GCCTCGCGTTCCACTA
CCCGGCCTGTCGCCTAGTCTTCTCCCCCAAATCTCTCCCTCAAACCCTACAGCCGATCCAGCCCTCCCC-ACCGCGCCGA
TCGCCATGGCCGCCCCCAACAACGACCCGCCCGCCGCCAGCGCCAGCGCCTCCACCAGCGACGCCGCCCTCGCCGCGCCG
GAGGACACCTCGATCGAGGCGCTGGCGCGGCGCGTGCAGGAGCACATGACCCTCGCCAACAACCCCACCGCCCGCCGCCA
CAAGTTCTGGGAGACGCAGCCCGTCGGCCAGTTTGGCGACGTCGCCGACGTCTCCCTCCCCGACGGTGCCATCGAGCCGC
CCTCCCCGCTCTCCGAGGTCCGCGCCGACCCCTACCCTCTCCCCGCCGCCTTCGAGTGGTTCACCTGCGACCTCGACGAC
GACGCCCTCCTCGCCGACCTCTACGCCCTCCTCGCCCACAACTACGTCGAGGACGACGAGAACATGTTCCGCTTCAACTA
CTCCCCGGCCTTCCTCCGCTGGGCGCTCCGCCCCCCCTCCTTCTTCCGCGCCTGGCACATTGGCGTCCGGGCCAAGGAGT
CCAAGAAGCTCGTCGCTTTCATATCCGGCGTCCCCGCGCGCATCCGTGCGCGCGACGACGTTGTCCGCATGGCCGAGATC
AACTTCCTCTGCGTCCACAAGAAGCTCCGATCCAAGCGCCTCGCGCCGGTGCTCATCCGTGAGGTCACCCGTCGCGTCCA
CTTGGAGAACATCTGGCAGGCTGCCTACACTGCGGGCGTCGTCCTCCCGACCCCCATCACCACCTGCCGCTACTGGCATC
GATCCCTCAACCCGAAGAAGCTCATCGACGTTGGCTTCTCCCGTCTTGGTCCTCGGATGACCATGAGCCGCACGGTCCGG
CTCTACAAGCTGCCTGATGCGCCGCTTACCCCTGGGTTCCGCCAGATGGAGTTGAGGGATGTTGCAGCAGTCACACGCTT
GCTCAGGGCATACCTTGCAAGGTACGTGGTGGCGCCAGATTTTGATGAGCTTGATGTTGAGCACTGGTTGCTCCCCCAGG
AGGATGTGGTGGACAGCTACCTTGTGGAGAGCCCTGAGACGCACGAGGTCACAGATTTCTGCAGCTTTTACACCCTGCCC
TCGTCCGTGCTGAACAATGCCAACTACTCGACACTCAAGGCCGCATACTCATATTACAATGTTGCTGTCAAGACCCCGTT
GCAGCAGCTGATGAATGATGCACTGATTGTGGCCAAGCAGAGGAACTATGATGTGTTCAACGCGCTCGATGTCATGGAGA
ACGAGGGGTTCCTCAAGGAGCTCAAGTTTGGCCCTGGAGACGGGCAGCTGCACTATTATCTCTACAATTATCGCATTCGC
AATGGAATCAAGCCATCTGAGCTTGGGCTTGTGCTTCTATAGGGTGGTCGAGGCTCAGGATGGTGTTTGGGTTATACTCT
TTTCAGCAGGTACTCCTTGTGTGGCTGGTTTAGTATGCGTCTTTCCTGGTTGCTACAGGTGATGGTTTGATTTCGGTCAT
GCTGTATGTTGCCCAGTGTGCAATCCGTCATAGCTCTTTTGTTTATTGTGGTAGCAAATCTTCCATGCCTTTTCATGGGA
ATCCACATTGATTTGCAAAT---GAGGAGACTGGAATTAGAAATTCCTTTTCAATTTTAAGACTGTA-TTTTCAATTAGT
TACATTCAGTGTGTATGGTTCAAAGAAT-TTTATGATGGCACTCAGTTTACCAAGGAATTTTTGATAGATTTGTGTTATG
CTAAATCATTCAAGTACCCTTGTGTTTTGAGGTTCTAACTATCTGGCTTCGTCGATTTATGACATTCACCATTGTTCCAT
CTAGAATGCCCCAAAATTTGATGTCCTTATGGTATGCAAATCTGTATTACTTGTTTTTACGGATTGTAGCCTAATGCTGC
TATCATATGAGGTGGGTTTATTATGTTTGATGACTTGGATG---------------TTCTTAT-----------------
-------TAATGTTTGGTGCATCATTGCATCAATAAGCCTCTTTGTCAACCTTGTGGCATCCTCCCCCCTCTTTTGTTTT
TGTTTTGTTTTTGCCCTGTCTTCAAATCACTGCATTTGTGCACTTGCTGTTAACTTCCTAGCTTTCTCTGTTTGAAACAC
A----GTCATCTTTGGTCATTCTGACATTACATAGTCTAAGGCACCTTATTAGATGTTAGCCAATGTTC-ACATCATTTA
GTTGCCCAATTAGATTGTGTT--TAAACTTGTCGTATTCCTGACCTGGAATGATAAGTGAAAACAGCCCAACAGAAGGGT
TGATTGGA--TTTCAAATCCAAGT--------------------------------------------------------
--------------------TACCATTCTGTCAAATGGTATTCATGGTGGTTGCAAAAGTATCAACAGAGTTCCCTTGCA
AACTCTGGAGGTCTTCCAATCTGTGGTCGGACACTAAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>SNPs
------S-------------------------S--S------------------------------------S------S
------S-----S--------S-S----------S----------S-S-------------------------S------
------------S---------S-S------------------S----------S----S-----S-S--------S---
-S-----------S-S---S----------------S---S----------------------S----S-----------
-S--S--------------------------SS---SS------S----------SS-------------------S---
-S----SS--------S---------S-----------------S--------S---------------------S----
---------------------------S---------------------------------------------------S
-----SS--------S------------------------S---------S--------------S--------------
-------------------------------S-------S-------------------S--------------S-----
-S-------SS-SS--S----SS---S----S-----------------S----------S-------------------
--------------------------------------------------------SSSSS--------------S----
--------------------------------------------------------------------------------
------------------S-------S--S---------------------------------------S----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------SSS--------------------------------------------S------------
----------------------------S---------------------------------------------------
-----------S-------------------S---------------------S---S----------------------
-------S--------------------------------------------------------S---------------
-------------S----S--------------------------------------------------S---S------
S--------------------------------------------------------------------------S----
-S-------------------------------------------SS------------S---S----------------
-----------------------------------SSS-------------------S----------SS----------
----------------------------------S-------S--------------S----------------------
-----SS-SS----------------------------------------------------------------------
--------------------------------------------------------------------------------
---S------S---------------S-S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_715
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CGACTTGACGGACGCATCTA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2489
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TAAGCCATCTGAGCTTGGGC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_2243
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGCTTTTACACTCTGCCC
TCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_3874
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTTGCCTCCACAGGGTTGTT-------------------
