>input_sequence_44837
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-----------------------------------------------------------ATGGAGGAGGTGACGGAGGGG
GTCAAGAACCTGGCCGTCACGGAGCCGCACAAGAAGAACCGGATCCAGGTCTCCAACACGAAGAAGCCGCTCTTCTTCTA
TGTCAACCTCGCCAAGGTGAATCCCATTTCCTCTCCCCGCCCCTTCGATCTCGGCTTGTTTGTTCCGCCCGGGTATTCGG
GGAGGGCTTTGATCCGCACCGGGGTCCGGTCTAAAACCCTTGGAAAGT-CCTCCCCATCTTGTTTTTCT-GTTGATTCCT
GCGTTTAGTTTAGTTTTAGAACGCCTGTGCTGGGATTAGATTCGCTCTG--TGCACTTTCTGTTGTTGAGTCTGCGTTTC
CGCTGGTCTATGCGGTTTATTTCGGGGCATAGATTTAGTTTTGTGATGTTTTTTTTTTTGCGTGTTTTTGTTGTGAAATC
GGAAGCTAATGCTGTTGTGGCGATGATTTTGCAGAGGTACATGCAGATGCATAACGAGGTGGAACTCTCCGCTCTCGGCA
TGGGTAAGCTCCTCTGCCCTTCAGGATTATTTCAACTGTCTGGTACC----AGGCTACTAGCGATTAGTAATGGCTGCTG
TGCTTCTGCAATGAAGAGCTCATGAGCTTAGAACCGATTATATAAGCCTACCTCGTCATGATTTGTTTTAGTTTTAGATT
TGACCAAAATATTCAGTGGTTGTTCTTGTTCGCGATGTCATTGTGCAAGTTTATTTTTCAGCATTCATGCTGATTGTCCC
AACTTATGGATGGTTAGTGTTCTCCTAAGTCCTTAGGAAGGGTCAGTCGATTCTAATGACTTCTAAAACTAATGTTTAAC
---AGTGTTGTCGCTTACATGTGCTGTCTTACTAATTATGTCTTTCAAACCATCGGGTTGCCTTGATTTCTTATGTGAGA
TGCTGTATATTAAAACCATCGGATATGCAGTTAACTTTTCAAATGCAGCTGAGAATTGCCAGTTACTCCATGTACAGGAG
CTCATTTACGTTATAAATCCATGTACAGGATGCTCTTTGGCTACTATGCAGTACACCCAAGAACTTGAGTAC-TTTTTTA
CCAGCTTGTCTGTGTTGCTTTGGCTGCTGTTATGTTCTTTTCTTGTCAATCCAAATTTTTGGAAATTTAT-TATGTGATC
AAAGTATCATTCATTTTAACATCACAAAACTAATTCATCCTTCGGCTGTTTGTCTGATCCTCTTTGATGTTAAAGCCATC
AAATGCCAGTTT-ATTTGTCTCCTTCGT--------TCTGCTCATTGATTCTTTGTTATGGTGCTTG--AAATGT-CAAC
TGATGAATCTCTTGTC--TATCCTTTCAGCTATCGCCACTGTGGTGACAGTTGCCGAAATTCTGAAAAATAATGGCCTTG
CTGTTGAAAAGAGTAAGACTCAGGTTTCCTTGTTTGTATATTCATC-TTTGCATTTTCGTTCTCTCTAGTTACTCAAAT-
CAAATAAAATCTCTTGCAGAAATCATGACATCCACTGTTGATGTCAATGATGAATCAAGGGGCCGCCCGATGCAGAAGGC
TAAGGTTAGATTTCTTCCTCAATTCCCATGAA-------AGATAGCCGTGTTTTCCAACGG--TATGCCAATGTTTGCTG
ATCCTTTAAACTGTTTCTACACCAGATTGAAATAGTGCTGGGCAAGACGGAGAACTTCGACGAGCTGATGGCCGCCGCCG
CGGAGGAGAGGGAAGTCGCAGCCGCCGAGGAGGGCGAGGAGCAGGGCTAA------------------------------
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>chr7A_1_TraesCS7A01G374500
AGGTGAAAATATTTTTTTATTAAAAAGACGAATAAGAAAAGTGTTTTATCGTTTATGTCACTAGTTGTGTCTCACTACTT
AATTTTACCATTAGAAGTTATAACTACTAAAAAATGCCATTGATACATGAGATGCTTGCTCAAAAATGCCATTGATACGA
TGAGATGCTTGCTCAAAAATGACATTAGATATCTAAAAAATGCCATCGCTCCGTTAGAATATTTGCTCAAAAATGCCATT
AGACATTGTTATTTTCACTTCAAACCCGTTGACCATGTTATATGACAGGAATAAGCCTAGACCCACATGTCAGTCCTCTC
TATCTCACAATGATAAGTGTGGCCCCACTTGTCAGGAGTAATCAAGCAAATAATTTTAC-AGAAAAATAAGAACGATGTC
CGGATCAAGTAGGCCCCACACTTTATTTTAGTGAGATAGAGGGAGAGCTGGCATGTTGGTCCATAGGTATTTATGTCATT
ATAACATGGCAAAAGAGATTTGAGATCACAATAATGATGTCTAGTGGCATTTTTGAGTATGTGTCTAATGAAGCGATGGA
ATTTTTGAGCGGTTG-AAATTTCTCGTGGCAAAACTGAGTAGTGGGACACTATCGGTGGCATAAATGATAAAAACCCATA
AGAAAATGGAGAGAAACAGAAAGAAAAACGAACCAGAAAATAAAAGGAAATAAGAAAGGGAAAGCCGAACTTGGGCCAGG
CCCGGGACAACCCTTCTCATGGATAGGCGCAGCCCG-CAGGACTCGGAGCCCGAGTTGGTGGTGGAACCCAACTCGAAGT
CGCT-GCTCCCGTCCATATAACCC---AACCCAGCCGACCCACAGGA---------TCTCGCCGCGGAATCCCGATATTT
ATTTTTCTTGCGTTCCGGTCCCCAGGCTTCGAGTTATTTCCCTGGTCTGGTGCTCGCGCGGCG---GCGGCGGCGGCGGA
GGGTTTGCGTCGGCGCTCTCGCGAGCTAGGGTTTCGGGCCGAGGAGGAGGAGGAGCGAGATGGAGGAGGTGACGGAGGGG
GTCAAGAACCTGGCCGTCACGGAGCCGCACAAGAAGAACCGGATCCAGGTCTCCAACACGAAGAAGCCGCTCTTCTTCTA
TGTCAACCTCGCCAAGGTGAATCCCATTTCCTCTCCCCGCCCCTTCGATCTCGGCTTGTTTGTTCCGCCCGGGTATTCGG
GGAGGGCTTTGATCCGCACCGGGGTCCGGTCTAAAACCCTTGGAAAGT-CCTCCCCATCTTGTTTTTCT-GTTGATTCCT
GCGTTTAGTTTAGTTTTAGAACGCCTGTGCTGGGATTAGATTCGCTCTG--TGCACTTTCTGTTGTTGAGTCTGCGTTTC
CGCTGGTCTATGCGGTTTATTTCGGGGCATAGATTTAGTTTTGTGATGTTTTTTTTTTTGCGTGTTTTTGTTGTGAAATC
GGAAGCTAATGCTGTTGTGGCGATGATTTTGCAGAGGTACATGCAGATGCATAACGAGGTGGAACTCTCCGCTCTCGGCA
TGGGTAAGCTCCTCTGCCCTTCAGGATTATTTCAACTGTCTGGTACC----AGGCTACTAGCGATTAGTAATGGCTGCTG
TGCTTCTGCAATGAAGAGCTCATGAGCTTAGAACCGATTATATAAGCCTACCTCGTCATGATTTGTTTTAGTTTTAGATT
TGACCAAAATATTCAGTGGTTGTTCTTGTTCGCGATGTCATTGTGCAAGTTTATTTTTCAGCATTCATGCTGATTGTCCC
AACTTATGGATGGTTAGTGTTCTCCTAAGTCCTTAGGAAGGGTCAGTCGATTCTAATGACTTCTAAAACTAATGTTTAAC
---AGTGTTGTCGCTTACATGTGCTGTCTTACTAATTATGTCTTTCAAACCATCGGGTTGCCTTGATTTCTTATGTGAGA
TGCTGTATATTAAAACCATCGGATATGCAGTTAACTTTTCAAATGCAGCTGAGAATTGCCAGTTACTCCATGTACAGGAG
CTCATTTACGTTATAAATCCATGTACAGGATGCTCTTTGGCTACTATGCAGTACACCCAAGAACTTGAGTAC-TTTTTTA
CCAGCTTGTCTGTGTTGCTTTGGCTGCTGTTATGTTCTTTTCTTGTCAATCCAAATTTTTGGAAATTTAT-TATGTGATC
AAAGTATCATTCATTTTAACATCACAAAACTAATTCATCCTTCGGCTGTTTGTCTGATCCTCTTTGATGTTAAAGCCATC
AAATGCCAGTTT-ATTTGTCTCCTTCGT--------TCTGCTCATTGATTCTTTGTTATGGTGCTTG--AAATGT-CAAC
TGATGAATCTCTTGTC--TATCCTTTCAGCTATCGCCACTGTGGTGACAGTTGCCGAAATTCTGAAAAATAATGGCCTTG
CTGTTGAAAAGAGTAAGACTCAGGTTTCCTTGTTTGTATATTCATC-TTTGCATTTTCGTTCTCTCTAGTTACTCAAAT-
CAAATAAAATCTCTTGCAGAAATCATGACATCCACTGTTGATGTCAATGATGAATCAAGGGGCCGCCCGATGCAGAAGGC
TAAGGTTAGATTTCTTCCTCAATTCCCATGAA-------AGATAGCCGTGTTTTCCAACGG--TATGCCAATGTTTGCTG
ATCCTTTAAACTGTTTCTACACCAGATTGAAATAGTGCTGGGCAAGACGGAGAACTTCGACGAGCTGATGGCCGCCGCCG
CGGAGGAGAGGGAAGTCGCAGCCGCCGAGGAGGGCGAGGAGCAGGGCTAATAAACTGTCTTGAGCCGGCTGTTGTAGCTT
TTATTTAGTACTTGCTGCTAGGTTGTGTGTTATCTTCTCTTGGCCAGCAAGAGATAGGTACTTGTGTAACCAAAGAGTTC
TTTGTATTTGTTTCGTCTCCGTGGTAGTTTAATGTCGATGGTATTCTGGTTCACTCAAATGATATGCCTTGTGTTTTATT
CGTTTTATTATTTGGTGCTGTTTGTTAACCTTGTTTTGACGCCTCGCTTGTGAAAGAAACCCTCGGACACAATACTACTC
GGAGTCGTATCTCTAGAATCTGTTTGGGATACTGGACACGGGGTTTCAACTCATAACCAAAGACTATTGCTTGTACGCAA
GTCATATCCTATGAGTTTTGCACAAAAGGTCTATAGATAGATGCCTCAAAAGACCAACTTCCGCGAGCCCCTAAGAGCAT
CTCTAGCAGGTCCTGGCAAAATATTTGTGGGATGAGTTTACATGGTCTGTTCCGAGCCGAAGGCCTCGCGGTACCGTAAA
TTTTCTTGAGCCTCACAACTTTTTGATTTTTAAC-AATATCAACCGAACAGAATTATAATATAAATTAAACGTATGAATA
TAAATGATCCGAAAGGCAATTCACAGTACAACAATC---TTCATTACAACAACCGTTCAAATTCTAATAATTAGTACAAC
AATAAATTGTTC--------------------------------------AATCACACACAAATACATATGAAATTTATA
AAATTAAAATTAAAATGGGAGTCTAATCT----CCCATAGAGTTGCCACT-ATGCTCAACAAGATCATCGCGGAGCTGGT
AGTGTGAAGCACTATTCTCAATCTTCCGGCATGTCTCAAGAAATGCAGTGATCTCACCTGCGTCCCTGCCAGGCTTCACA
TGGCTACCCACATTATCATAATAAAACTCTTAAGTTCAAATTTCTCTCATCCTCGATGATCATATTGTGTAAAATTACAC
ATGCGGCCATGATGTTTTTGAGGGATTTCTT-ATCCTAGAATCGAGCGAGACCTCAAA
>chr2A_31
AATAAAAAATAGGGT----------------------------TTTTATCATTTATGGCACTAGTTGTGTCCCACTACTC
GGTTTTGCCATTAGAAGTTACAAC--------------------------------TGCTCAAAAATGCCATCAATCCA-
TGAGATGCTTGCTCAAAAATGCCATTAGATATCTCAAAAATGCCATCGTTCTGTTAG-ATGTTTGCTCAAAAATGCCATT
AGACATTGTTATTTTTACGTCAAACCTGTTGACCATGTTCTATGACAAAAATAAGCCTAGACCCACATGTTAGTTCTCTC
TATCTCACAATGATATGTGTGGCCCCACTTGTCAGGAGTAACCAAGCAAATAATTTTAC-GGGAAAATAAGAACGCTGTT
GGGATCAAGTGGGCCCCATACTTTATTGTAGTGAGATAGAGGGAGAGCTGGCATGTTGGTTCATAGGTATTTATGTCATT
ATAACATGGCAACAGAGATTTGAGATCACAATAATGATGTTTAGTGGCATTTTTGAGCATGTGTCTAATGAAGCGATGGC
ATTTTTGAGCAGTTG-AAATTTCTAGTGGCAAAACTGAGTAGTGGGACACAACCGGTGGCATAACTGATAAAAACCCTAA
---AAAAT------------------------------------------------------------------------
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>chr1A_137
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--------------------------------------------------------TGCTCAAAAATGCCATCAATCCG-
TGAGATGCTTGCTCAAAAATGCCATTAGATATCTAAAAAATGCCATCGTTCTGTTAG-ATGTTTCCTCAAAAATGCCATT
AGACATTGTTATTTTTACGTCAAACCCGTTGACCATGTTCTATGACAAAAATAAGCCTAGACCCACATGTCAGTTCTCTC
TATCTCACAATGATATGTGTGGCCCCACTTGTCAGGAGTAACCAAGCAAATAATTTTAC-AGGAAAATAAGAACGTTGTT
GGGATCAAATGGGCCCCATACTTTATTGTAGTGAGATAGAGGGAGAGCTGGCATGTTGGTTCATAGGTATTTATGTCATT
ATAACATGACAAAAGAGATTTGAGATCACAATAATGATGTTTAGTGGCATTTTTGAGCATGTGTCTAATGAAGCGATGAC
ATTTTTGAGCAGTTGAAAATTTCTAGTGGCAAAACTGAGTAGTGGGACACAACTGGTGGCATAACTGATAAAAACCCTAT
---AAAA-------------------------------------------------------------------------
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-----------------AATTGGAGA-AGGAGAAA---------------------------------------------
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>chr2A_137
--------------------------------------------------------------------------------
--------------------------------------------------------TGCTCAAAAATGCCATTAATCCG-
TGAGATGCTTGCTCAAAAATGCCATTAGATATCTCAAAAATGCCATCATTTTGTTAG-ATATTTGCTCAAAAATGCCATT
AGACATTGTTATTTTTACGTCAAACCCGTTGACCATGTTCTATGACAAAAATAAGCCTAGACCCACATGTCAGTTCTCTC
TATCTTACAATGATATGTGTGGCCCCACTTGTCAGGAGTAACCAAGCAAATAATTTTAC-AGGAAAATAAGAACGCTGTT
GGGATCAAGTGGGCCCCATACTTTATTGTAGTGAGATAGAGGGAGAGCTGGCATGTTGGTTCATAGGTATTTATATCATT
ATAACATGGCAAAAGAGATTTGAGGTCACAATAATGATGTTTAGTGGCATTTTTGAGCATGTGTCTAATGAAGCGATGGC
ATTTTTGAGCAGTTG-AAATTTCTAGTGGCAAAACTGAGTAGTGGGACACAACCGATGGCATAACTGATAAAACCCCAAA
---CAAA-------------------------------------------------------------------------
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>chr5A_137
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--------------------------------------------------------TGCTCAAAAATGCCATCGGTCCG-
TGAGATGCTTGCTCAAAAATGCCATTAGATATCTCAAAAATGCCATCATTATGTTAG-ATGTTTGCTCAAAAATGCCATT
AGACATTGTTATTTTTACGTCAAACCTGTTGACCAAGTTCTATGACAAAAATAAGCCTAGACCCACATGTCAGTTCTCTC
TATCTCACAATGATATGTGTGGCCCCACTTGTCAGGAGTAACCAAGCAAATAATTTCTATAGGAAAATAAGAACGCTGTT
GGGATCATGTGGGCCCCATACTTTATTGTAGTGAGATAGAGGGAGAGCTGGCATGTTGGTCCATAGGTATTTATGTCATT
ATAACATGGCAAAAGAGATTTGAGATCACAATAATGGTGTTTAGTGGCATTTTTGAGCATGTGTCTAATGAAGCGATGGC
ATTTTTAAGCAGTTG-AAATTTCTAGTGGCAAAACTGAGTAGTGGGACACAACCGGTGGCATAACTGATAAAACCCCAAG
---AAAATGAGAGAAAAAGAGAGAA-------------------------------------------------------
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>chr4A_139
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----------------------------------------------------------CTCAAAAATGCCATCAATCCG-
TGAGATGCTTGCTCAAAAATGTCATTAGATATCTCAAAAATGCCATCGTTCTGTTAG-ATGTTTGCTCAAAAATGCCATT
AGACATTGTTATTTTTACGTCAAACCCGTTGACCATGTTCTATGACAAAAATAAGCCTAGACCCACATGTCAGTTCTTTC
TATCTCACAATGATATGTGTGGCCCCACTTGTCAGGAGTAACCAAGCAAATAATTTTAC-AGGAAAATAAGAACACTGTT
GGGATCAAGTGGGCCCCATACTTTATTGTAGTGAGATAGAGGGAGAGCTGGCATGTTGGTTCATAGGTATTTATGTCATT
ATAACATGGCAAAAGAGATTTGAGATCACAATAATGATGTTTAGTGGCATTTTTTAGCATGTGTCTAATGAAGCGATGGC
ATTTTTGAGCAGTTG-AAATTTCTAGTGGCAAAACTGAGTAGTGAGACACAACCGGTGGCATAACTGATAAAAACCCAAG
---AAAA-------------------------------------------------------------------------
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>chr7B_743
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------------------------AGCCGCAGCCCG-CAGAACTCGGACCCGCCGAGT-TGGAC---CCCAAGTCGAACT
CCCTCGCTCTCGTCCATACGTCCATATAACCCAAGCGACCCACGGGATCTAGACTGTCTCGACGCCGAATCCCGATATTT
ATTTTTCTTGCGTTCCGGTCCCCAGGCTTGGAGTTATTTCC-TAGTCTGGTGCTCGCTCGTCTCGCGAGGCGGCGGCGGA
GGGTTTGCGTCGGCGCTCTTGCGAGCTAGGGTTTCGGGTCGAGGAA------GAGCGAGATGGAGGAGGTGACGGAGGGG
GTCAAGAACCTGGCCGTGACGGAGCCGCACAAGAAGAACCGGATCCAGGTCTCCAACACGAAGAAGCCGCTCTTCTTCTA
TGTCAACCTCGCCAAGGTGAATCCCCTTTTCTCTCCGCTTCATCGAA---------------------------------
------CTTTGATCCGCGCTGGGTTCCGGTCTAAAACCCTTGGAAAGCGCCTACTCATCTTGTCTATAT-ATTGATTCCT
GCGCTTTGTTTTATTTTAGAACGTCTGTGCTTGGATTAGATTTGCTCTG--TGCTCTTTCCGTTGTGGAATTTGCGTTCT
GCCGATCTATATAGTTTG--TTTGGGGCAACGATTTAGTTGTGTGATGTTTTTGTTG---------------GTGAAATC
GGAAGCTAATGTTGTTGTGGTGATGATTTTGCAGAGGTACATGCAGATGCATAACGAGGTGGAACTCTCCGCCCTCGGCA
TGGGTAAGCTCCTCTGCCCTTCAGGGTTATTTCAACTGTTTGCTAGTACTAAGGCTACTAGAGATTAGTAATCGCTGCTG
TGTTGCTGCAATGAAGCGCTCATGGGCTTAGAACCGATTGTATAAGCCTACCTCGTCATGATATGTTTTAGTTTTAGATT
TGACCAAAATATGCATTCG------TTGTTTGCGATGTCATCGTGGAAGTTTATTTTTCAGCATCCAGGCTGATTGTCCC
AGCTCATGGTTGGTTAGTGTTCTCCTAAGTCCTTAGGAAGGGTCAGT----------GACTTCTAAGACTAACACATTTA
ACAAGTCTTGTGCCGGACATGTGCTGTCTTACTAATTGTTTGTTTCAAACCATCGGTTTGCCTTATTTTCTTATTTGAGA
TGCCATATTGTT----------ATA------------------TGCAGCTGAGAATCTCTGTAGT---------------
---------------------------------------------------------------------TAC-TTTTTTA
CCAGCTTATCTGTGTTGCGGTGGCTGTTGTTATGTTCTTATCTTGTCGATCCAACTATTGGAAAAT---T-TATGTGGTC
AAAGTTACATTCATTTA---ATCACAAAACTAATTCATTGTTCGGCTGTTTATCTGATGCACTTTGATGTTAAAGCCAAC
AAATGACAGTTTCATTTGTCTCCTTCCTTTACAT----TGCTCATTGATTCTTTGTTATGGTGCTTGTGAAATGTCGAAC
TGCTGACTCTCTTGTTTATATCCTTTCAGCTACCGCCACTGTGGTGACAGTTGCCGAAATTCTGAAAAATAATGGCCTTG
CTGTTGAGAAGAGTAAGACTCAGGTTTCCTTGTTTGTA-ATTCATCTTTTGCAATTTCGTTCTCTCTAGTTATTCAAAT-
CAATTAAAATGTCTTGCAGAGATCATGACATCCACTGTTGATGTCAACGATGAATCAAGGGGCCGCCCGATGCAGAAGGC
CAAGGTTAGATTTCTTCCTCAGTTCCCATGAACGACATGAGCTAGCAGTGTTTTAGAACAGTATATGCCATTGTTTGCTG
ATCCTTGAAACCGTTTTTACGCCAGATTGAGATAGTGCTGGGCAAGACTGAGAACTTCGACGAGCTGATGGCTGCTGCCG
CGGAGGAGAGGGAAGTCGCAGCTGCCGAGGACGGCGAGGAGCAGGGCTAATAAACTATTTTGAGTCGGTTGTTGTAGCTT
TTATTTAGTACTTGCTGCTAGGTTGTGTGTTATCTTCTCTTGGCCAGCAAGAGATAGGTACTTGTGTAACCAA--GGTTC
TTCGTATTTGATTCGTTTCAGTGCTAGTTTA-TGTTCATGGTATGCTGTTTCACTCACATG--ATACCTTGTGTTTGATT
CGTCTTATTATGTGGT----------------------------------------------------------------
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>chr7D_743
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------------------------AGCCGCAGCCCGCCAGGACTCGGACCCCGAGTTGGTGGAC---TCCAACTCGAACA
CCCTCGCTCTCGTCCATATAACCC---AACCCAACCGACCCACAGGA---------TCTCGACGCCGAATCCCGATATTT
ATTTTTCTTGCGTTCCTGTCCCCAGGCTTCAAGTTATTTCC-TGGTCTGGTGCTCGCTCGTCTCGCGCGGCGGCGGCGGA
GGGTTTGTGTCGGCGCTCTTGCGAGCTAGGGTTTCGGGTCGAGGAA------GAGCGAGATGGAGGAGGTGACGGAGGGG
GTCAAGAACCTGGCCGTGACGGAGCCGCACAAGAAGAACCGGATCCAGGTCTCCAACACGAAGAAGCCGCTCTTCTTCTA
TGTCAACCTCGCCAAGGTGAATCCCCTTTTCTCCCCGCTTCTTCGAC---------------------------------
------CTTTGATCCGCACTGGGTTCCGGTCTAAAACCCTTGGAAAGCGCCTACTCATCTTAGTCTACCCATTGATTCCT
GCGCTTTGTTTTATTTTAGAACGCCTGTGCTTGGATTAGATTTGCTTTGCTTGCTATTTCCGTTGTGGAATTTGCGTTCT
GCCGATCTATAG-GGTTTATTTCGGGGCATCGATTTAGTTGTGTGGTGTTTCTGTTG---------------GTGAAATC
GGAAGCTAACGTTGTTGTGGTGATGATTTTGCAGAGGTACATGCAGATGCATAACGAGGTGGAACTCTCCGCCCTCGGCA
TGGGTAAGCTCCTCTGCCCTTCAGGATTATTTCAACTGTTTGCTAGTACTAAGGCTACTAGCGATTAGTAATCGCTGCTG
TGTTGCTGCAATGAAGCGCTCATGGGCTTAGAACCGATTGTGTAAGCCTACCTCGTCGTGATATGTTCTAGTTTTAGATT
TGACCAAAATATGCATTGGTTGTT------TGCGATGTCATTGTGTTAGTTTATTTTTCAGCATTCATGCTGATTGTGCC
AGCTCATGGTTGGTTAGTGTTCTCCTAAGTCCTTAGGAAGGGTCAGTCAATTCCAATGACTTCTAAGACTAATACATTTG
ACAAGTGTTGTCGCTTACATGTGCTGTCTTGCTAATTATTTGTTTCAAACCATCCGTTTGCCTTAATATCTTATTTGAGA
TGCCATATTGTT----------ATATGCAGTTAACTTTTCAAACGCAGTTGAGAATTGCCGTAGT---------------
---------------------------------------------------------------------TACTTTTTTTA
CCAGCTTATCGGTGTTTTGGTGGCTGCTGTTATGTTCTTATCTTGTCAATCCAGCTATTTGGAAAATTATGTATGTGGTC
AAAGTTACATTCATTTA---ATCACAAAACTAATTCATTGTTAGGCTGTTTATCTGATGCACTTTGATGTTAAAGCCAAC
AAATGACAGTTT-ATTTGTCTCCTTCCTTTACTTCCTCTGCTCATTGATTCTTTGTTATGGTGCTTGTGAAATGT-GAAC
TGATGAATCTCTTGCT--TATCCTTTCAGCTATCGCCACTGTGGTGACAGTTGCCGAAATTCTTAAAAATAACGGCCTTG
CTGTTGAAAAGAGTAAGACTCCTGTTTCCTTGTTTGTA-ATTCATC-TTTGCAATTTCGTTCTCTCTAGTTATTCAAACC
CAATTAAAATGTCTTGCAGAGATCATGACATCCACTGTTGATGTCAATGATGAATCAAGGGGCCGCCCCATGCAGAAGGC
CAAGGTTAGATTTCTTCCTCAGTTCCCATGAACGACACGAGCTAGCAGTGTTTTAGAACAGTATATGCCAATGTTTGCTG
ATCCTTGCAACCGTTTTTACGCCAGATTGAGATAGTGCTGGGCAAGACTGAGAACTTCGACGAGCTGATGGCTGCTGCCG
CGGAGGAGAGGGAAGTCGCAGCTGCCGAGGACGGCGAGGAGCAGGGCTAATAAACTATTTTGAGTCGGTTGTTGTAGCTT
TTATTTAGTACTTGCTGCTAGGTTGTGTGTTATCTTCTCTTGGCCAGCAAGAGATAGCTACTTGTGTAACCAA--AGTTC
TTCGTATTTGATTCGTTTCAGTGCTAGTTTA-TGTTCATGGTATGCTGGTTCACTCACATGATATACCTTGTGTTTGATT
CGTCTTATTATGTGGT----------------------------------------------------------------
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>chr2D_3153
GTCCG---------------------------------------------------------------------------
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---------------GCAAATATTTTGCTGGACATATTTACGGGGTCTGTTCCGCGCCGGAGGGCTCGCAGTACCGCAAA
TCTTGTATAGCTTCGTAAATTAGAGA-ATTCAAC-AAAGAATAACGAATGAAATCATATTATAAATTAAACATATGAATA
TAAATGGTCCGGAAAGCAATTCGAAATGCCACAATCGTTTTCATTACATCAAATATTTAAATTTGAATAATTACAACA--
-CCA-------------------AATTG------------------TTCAAATCACACAAAAATACATG-----------
-------AATAAAAATGGGATTCTATCTCC--CCCCATAGAGTTGCCAACGATGCTCAATAAATTTAAGCTTGAGTTGGT
TGTGTGAATCACGGTCCTCGATCTTCCAGTAGGTCTTAAGAAATGCAGTGATCTCATCTGTGTCCCTGGCAGGCTTCACA
CGGCTACCAACATTGTCATAATTGTACTCC-AAGTCCAAATCCCTCTCATCCTCGATGATCATATTGTGTAAAATTACAC
AACCTGTCATGATATTTCTGAGGGATTTTTTTATCACAGAAGCGAG------------
>chr5A_3159
GCAAA---------------------------------------------------------------------------
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---------------------ATTCTGCTGGACGAGTTTACAGGATCTGTTCCACGGCGGAGGTCTCGCGGTCCCATAAA
TTTTTCGTAGCTTTGCAAATTCATGATTTTCAAC-AATATAAACTTAATAGAATCACAATATAAATCAAACTTAT---TA
GAAATAGTCCGAAAGGCAAATCACAATACAACAATTGTCTTCATTACAACAAATGTTTAAATTTCAATAAATAATACAAC
AACAAATGGTCTGGAAGGCAAATAATTG------------------TTCAAATCACACACAAATACATATGAAATTTATT
AAAATGAAATGGGA-TCT-------ATCT----CCCATAGAGTTGTCACTGATGCTCAACAAGATCATCACGGAGCTGAT
GGTGTTAAGCATTGTTCCCAATTTGCCAGTAGGTATCAAGAAATGCATTGATCTCATCTGCGTCTTTGTCAGGCTTCACA
CGGCTATCAACATTATGATAGTAAAACTCT-AATTTTAAATCCCTCTCTTCCTTGATGATCATGTTGTCTCAAATTACAC
ATGTAGTCATGCTATTTCTGAGGGATTTTTT-ATCCTAGAAGCGAGCTGGACCTC---
>chr5D_3159
GCAAA---------------------------------------------------------------------------
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---------------------ATTTTGTTGGATGAGTTTACAGGATCTGTTCCACGGCGGAGGTCTCGCGGTCCCACAAA
TTTTTCGGAGCTTTGTAAATTCATGATTTACAAC-AATATAAACTTAATAGAATCA--ATATAAATCAAACTTAT---TA
CAAATGGCCCGAAAGGCAAATCATAATACAACAATCGTCTTCATTACAACAAATGTTTAAATTTCAATAAATAATACAAC
AACAAATGGTCTGGAAGGAAAATTATTG------------------TTCAAATCACACACAAATACATATGAAATTTATT
AAAATGAAATGGGA-TCT-------ATCT----CCCATAGAGTTGTCACTGATGCTCAACAAGATCATCACGGAGCTGAT
AGTGTTAAGCATTGTTCCCAATTTGCCAGTAGGTATCAACAAATGCATTGATCTCATCTGCATCTTTGTTAGGCTTCACA
-GGCTACCAACATTATGATAGTAAAACTCT-AATTTTAAATCCCTCTCTTCCTCGATGATCATGTTGTCTCGAATTACAC
ATGTAGTCATGCTATTTCTGAGGGATTTTTT-ATCCTAGAAGCAAGCTGGACCTC---
>chr3B_3159
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---------------GCAAAATTTTTGCGACATGATTTTACAGGATATGATCCGTGCCGGAAGCCTCGCGGTACCACAAA
TTTTCAGGAACTTTGCAAATTCATGTTTTTCAACAAATATAAACTTAATAGAATCAAAATGTAAATCAAACTTATAAATG
GTCC--------AAGGCAAATCACAATACAACAACCGTCTTCATTACAACAAATGTTTAAATTTGAATAGTTAATACCAC
AACA-------------------AATGGGGGGAAGGCAAATAATTATTTAAATCACACACAAATACATATGAAATTTATT
AGAATAAAATGGGACTCT-------ATCT----CCCATAGAGTTGCCACTGATATTCAACAAAATCATCATGGAGCTGGT
AGTACGAAGCACTGTTCTCAATCTTTCGGTAGGTCTCAAGAAATGCATTGATCTCATATGCGTCACTGGCAGGCTTCACA
GGGCTACCAACATTGTCATATCGAAATTCTAG--TTTAAATCCCTCTCATCCTCGATGATCATCTTGTGTAGAATTACAC
ATATAGTCATGATATTGCTGAAGGATTTCTT-ATCCCGTAAGCGAGCAACACCTCAAA
>chr2B_3180
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------------------------------------TTTACGGGGTCTGTTCCGCGCCAGAGGGCTCGCAGTACCGCAAA
TCTTGTATAGCTTCGTAAATTAGAGG-ATTCAAC-AAATAAAAAAGAATGAAATCATATTATAAATTAAACATATGAATA
TAAATGGTCTGAAAAGCAATTCAAAATACCACTATCGTTTTCATTACATCAAATGTTTAAATTTGAATAATTATTACAAC
ACCA-------------------AATTG------------------TTCAAATCACACAAAAATACATG-----------
-------AATAAAATTGGGATTCTATCTCC--CCACATAGAGTTGCCAACGATGCTCAATAAGTTTAAGCTTGAGTTGGT
TGTGTGAATCACGGTCCTCGATCTTCCAGTAGGTCTTAAGAAATGTAGTGATCTCATCTATGTCCCTGGCAGGCTTCACA
CGGCTACCAACATTGTCATAATTGTACTCC-AAGTCCAGATCCCTCTCATCCTCGATGATCATATTGTGTAAAATTACAC
AACCAGTCATGATGTTTTTGAGGGATTTTTT-ATCC-AGAAGCGAG------------
>chr1D_3189
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---------------------------------------------TCTGTTCAGCGCCGGAGGGCTCACGGTACCGCAAA
TTTTGCATAGC-TTGTAAATTAGAGA-TTTCAAC-AAAGAAAACAGAATGGAATCATAATATAAATTAAACATATCAATA
TAAATAGTCCAAAAAGCAATTCACAATATAAAAATCATTTTAAGTACAAGTAATGTTCAAATTCAAATAATTATTACAAC
ATCA-------------------AATTG------------------TTCAAATCACACACAAATACATATGAATA-----
-----AAAATGAGAATCT-------ACCCCCGCCCCATAGAGTTGCCAACGATGCTGAATAAGATCAAGCTTGAGTTGGT
TGTGTGAATCACGGTTCTCGATCTTCTGGTAGGTCTCAAGAAGTGCAGTGATCTCATCTGCGTTACTGGCAGGCTTCACA
CGGCTACCAACATTGTCATAATTATACTCT-ATGTCCAAATCCCTCTCATCCTCGATGATCATATTGTGTAAAATTACAC
AAGCAATCATGATGTTTCTAAGGGATTTTTT-ATCCCAGAAGTGAGCAGGACCTC---
>SNPs
-SSS-------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S------S-------------S-------S
SS----S-------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S--S
---------------------S--------------------------S--S-----S----------------------
---------------S--S--------------------S-------SS-------------------------S-----
---------------S-------------------------S--------------------S------------S---S
S---------S-------S--------S----------------------------------------------------
----------------------------------------S----------------S---------------------S
----------S-------------S-------------------------S-S-----------S-------------S-
SSS---SS--------S---S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS--S---------------------S-------------SSSSS-----------S-
-S-------S-----------------------S---------------------------S---S--------------
-----------------------------------------S---------------S--S-S-----------------
-------------------S------------------S------SSSSSSS----------------------------
-----------------S--------------------------------------------------------------
-------------------------S---S------S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-------------S---S-----------------------S----S-S---------------S---------
---S--S----SS------------------S----------S-----------S-----S-----S--S-S------SS
SS-SSSSSSSS-S-----------------S---------S------------S--SSSSSSSSSSSSSSSS--------
-----------S--------S---------------------------------------------------S-------
---------------------------------------S--S--SS-------------------------S-------
--S-S-----------S-------S--------------S----------------------S-----------------
------------S--S--------S-----S--------------S----------------------------------
-S--S----S--------------------------------------S----S------------S------SSS-SSS
---------------------------------------S-S--------------S-------S---------S-----
---SS---SS-SSSSSSSSSSS--------------------------------------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
-------S----------SS-------------------S--------------S-S--------------------S--
-----SS---------SSSS------------------SS-----------S------S-S-----------------S-
-----S--------------------S-------------------------------------------------S---
---------------S----------------------------------------------------------------
--------------------------------------S--------------S------------------S-------
---S------S---------S-----------------------------------------------------------
S--------------------S-------------------S----S-------SS---S--------------------
------S----S----S---S---------S-----------------S-----------------------S--S----
----------------------S--------S------------------------S-S-----S---S-----------
-------------------------------------------------------------------------SS-----
--S-------S-----S--S---S-------S---SS-------S------------S-------S----------S---
---S-------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-------S-------------------S-----------S----S--------------------
------S----S--S---S--SS-------S---------S-------S-----S----------------S--------
------S------------------S--------------------------SS----------S--------S------
--S----S--SS-------------------------------------------------------------------S
---S------S---------S------------------------------------------------S----------
-------------S---------------S-S------------------------S-----------S-----------
S-------S---------------------S----------SS-------------------------------------
----S-S----------------------------------S-----S----------
>forward_802
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--------------------------------------------------------------TGGAACCCAACTCGAAGT
CG------------------------------------------------------------------------------
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>reverse_1711
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------------------------------CGCGATGTCATTGTGCAAGT------------------------------
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>forward_1180
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----------------------------------------CCCTTCGATCTCGGCTTGTT--------------------
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>reverse_2991
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------------------------------TTGTTTTGACGCCTCGCTTG------------------------------
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