>input_sequence_44832
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---------------------------------------------------------------CTGTAAAT----AACCA
CATA-------------------A------------------------C---ACGGTGCATAAGCCCACACACGACACAC
GTCCGT------------GAACCACTGACACAAAGAAAGAAAGAAAGAAACCATGAACTGCCTACTACGGAACTCGCGCC
GCCTCCTCCTTGTGTGTAAGCAGGCAGGCGGCGTCCGCCGACTGGCTTCGCTGCTGCCGACCCATGCAAACCCGGTGTTC
CGCTTCAGTCAGTGGTACCGTAATCCGCGTACGGTCGCTGCAGTGGCGGCCCTCGCCTCAGGTGCCGGGGCTATGGCCGC
GCTGGGCCTCTACGACCGCGAGGTTGTGCCTTACACGAACCGCACGCACATGGTCATCAGGTCTCCCCAGTCCGAACGCC
AGCTCTGGGAGTCCCGTTACACAAAGGACAAGAAAATCTGGGCTTCCGAATCACGGATCGTCGATCCGCTTCAC-CCAGA
CAGCATTCGTGTACGTCGTATCGCCGAGAAAGTTATTGGCGCCACCTATCGTACCCTCCCTATCAACAGCAGCCACGATG
GCACCAAGAGACCGAAGCCACAGACAAGTCATCTTGAGGGGTTTGAGTGGGAGGTGATACTTGTTAAAGACGACGACCCC
ACTGCAGCGTGCGCTCCTGGTGGCAAGATTGCAGTATTTACCGGATTGCTCGACCGTTTTACCGATGCTGAGATTGCCTT
TGCTATTGCGCATGAGGTACGTAGGTTTAACATTTATA--------------------------------------TCCC
A------------------------GTGCATATTTTATGAGTTTTATTTG---AGGTGCCTAATTTTCTCTCCTTTTTT-
TTGTTCAGATTGGTCACATCGTTGCCAGACACTACTCGGAAATTTGTTACGCCAAGTGGTCTCCAATACCCATGTTTGTG
CCTTTCTTCCGAAGGTATGTATGACTGCA-----------------ATTATATAAATATATAGGCACACACAT-------
---ACACGTACACATTATACTTGTATATATTATATG-CCCAGAAATCATTTAGTCTCTAGGCTACGTCTCTTAATTAATT
AGTTGTGCTGCGCC------CTTATCCACAAATTGGAATTTCACTTTAGAGCAGCAGCGAGAACTCAAGCATGGTAGATA
ATCTATATAAACACATATATAACCCCTGAAAATCACAGTGTGGCTTCAAGAATAACAAGGACAATAGGCAATTAACAGGT
CAAGTTCTTGCAAAATTA--------------------------------------------------------------
-----------------------CACTAGAATTGCCCACACACAAAGGAACGTTAGCAAATTGCCACCTCGCGAGTGAAC
TGGGTACCCACCG-------------------------------------------------------------------
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-----------CGATGCCTCCTTGCTTGGCC-------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------GCTACAGTA
GGATAATGTTCACTAACAATTATTGGTTTCTTAAAGTAA-----CACCGTAACACATGAGTTGTTCTATGACTGCGCCGC
GTACATCATGTTCTGATGATCAATGTTGCCTATATATGCAGGTCGGAGATGGAGGCAGATCACATTGGAACCCTTCTACT
TGGAGCTGCTGGTTTCCATCCATACGCGTCCCTCTTGTACTTCCGGAAGCAGGCAATAATTGAAAGAGAGTC---GGTGT
CACAAGATCACATCCTTTTTAATCCTTCAGATACAACAAGGGCAGAGCGTGTGATGCAACCCAAAATCATGCAGGAGGCA
CTGAAACTATATAAGGAAGCTCCGCCCGACGAAGGTACCAGCTCAGAAGCCCCCGCTGAAGGATTTTCCTTTCGACAAAC
CCTGGGAGATGCATTCCAACTTATATCGACAAGACTGAGGCACGCTCTTACGGGGGGATCAGCAGATTAG----------
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------------
>chr5D_1_TraesCS5D01G520300
ATGAACTAGGGTTTCACATAAACATGCAAAAATAGGGCAAATGTGATGATTTTTCGGATGAATTTTTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAAGGAGAATACCTTACCTCCAGGGATGGATGTGGGACGAAATCCAGGAAAAATATCTTCAGATCTGACT
GATCTGGGTGAAGATTTGAGACAGGGAGAGAGGGGCGCCTCCACAGTGTTCTTCCTCTGTCTCTGTTTCTTTTCGTGCGG
GGGTGAGATGTGGATGGGTGCTTCATATTAGCAGTTCAGCAGAGGCACACACTTCTCGTGTGTTTCCTTGTATTTTGTCG
CCAGATTTGGAGGAGT-AGACATACACCGTGATGCAGTCATGGAGCACCATCGCTCTGGAAGATGAACGGCAAGCAGAGA
GAGCACAGTACGT-------------------------------------------------------------------
-----ACACAGTCTTGTATGT--TACGATCCATCACGTATATACGTACACGGTCTGGTATGTT-ATTAGGATCCGACACG
TGTATGTTAGGCT------CTCGGCCGAATTCCTGTCTAAAGCAGAATCGTATCAGGCCCGCAGGGCCCGAGTCGGTCTG
CACTTGCCGTGCCCAG------------CTCTGTATATAT-TTCCTTGCTCT--------ATACTGTAAAT----AACCA
CATA-------------------A------------------------C---ACGGTGCATAAGCCCACACACGACACAC
GTCCGT------------GAACCACTGACACAAAGAAAGAAAGAAAGAAACCATGAACTGCCTACTACGGAACTCGCGCC
GCCTCCTCCTTGTGTGTAAGCAGGCAGGCGGCGTCCGCCGACTGGCTTCGCTGCTGCCGACCCATGCAAACCCGGTGTTC
CGCTTCAGTCAGTGGTACCGTAATCCGCGTACGGTCGCTGCAGTGGCGGCCCTCGCCTCAGGTGCCGGGGCTATGGCCGC
GCTGGGCCTCTACGACCGCGAGGTTGTGCCTTACACGAACCGCACGCACATGGTCATCAGGTCTCCCCAGTCCGAACGCC
AGCTCTGGGAGTCCCGTTACACAAAGGACAAGAAAATCTGGGCTTCCGAATCACGGATCGTCGATCCGCTTCAC-CCAGA
CAGCATTCGTGTACGTCGTATCGCCGAGAAAGTTATTGGCGCCACCTATCGTACCCTCCCTATCAACAGCAGCCACGATG
GCACCAAGAGACCGAAGCCACAGACAAGTCATCTTGAGGGGTTTGAGTGGGAGGTGATACTTGTTAAAGACGACGACCCC
ACTGCAGCGTGCGCTCCTGGTGGCAAGATTGCAGTATTTACCGGATTGCTCGACCGTTTTACCGATGCTGAGATTGCCTT
TGCTATTGCGCATGAGGTACGTAGGTTTAACATTTATA--------------------------------------TCCC
A------------------------GTGCATATTTTATGAGTTTTATTTG---AGGTGCCTAATTTTCTCTCCTTTTTT-
TTGTTCAGATTGGTCACATCGTTGCCAGACACTACTCGGAAATTTGTTACGCCAAGTGGTCTCCAATACCCATGTTTGTG
CCTTTCTTCCGAAGGTATGTATGACTGCA-----------------ATTATATAAATATATAGGCACACACAT-------
---ACACGTACACATTATACTTGTATATATTATATG-CCCAGAAATCATTTAGTCTCTAGGCTACGTCTCTTAATTAATT
AGTTGTGCTGCGCC------CTTATCCACAAATTGGAATTTCACTTTAGAGCAGCAGCGAGAACTCAAGCATGGTAGATA
ATCTATATAAACACATATATAACCCCTGAAAATCACAGTGTGGCTTCAAGAATAACAAGGACAATAGGCAATTAACAGGT
CAAGTTCTTGCAAAATTA--------------------------------------------------------------
-----------------------CACTAGAATTGCCCACACACAAAGGAACGTTAGCAAATTGCCACCTCGCGAGTGAAC
TGGGTACCCACCG-------------------------------------------------------------------
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-----------CGATGCCTCCTTGCTTGGCC-------------------------------------------------
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-----------------------------------------------------------------------GCTACAGTA
GGATAATGTTCACTAACAATTATTGGTTTCTTAAAGTAA-----CACCGTAACACATGAGTTGTTCTATGACTGCGCCGC
GTACATCATGTTCTGATGATCAATGTTGCCTATATATGCAGGTCGGAGATGGAGGCAGATCACATTGGAACCCTTCTACT
TGGAGCTGCTGGTTTCCATCCATACGCGTCCCTCTTGTACTTCCGGAAGCAGGCAATAATTGAAAGAGAGTC---GGTGT
CACAAGATCACATCCTTTTTAATCCTTCAGATACAACAAGGGCAGAGCGTGTGATGCAACCCAAAATCATGCAGGAGGCA
CTGAAACTATATAAGGAAGCTCCGCCCGACGAAGGTACCAGCTCAGAAGCCCCCGCTGAAGGATTTTCCTTTCGACAAAC
CCTGGGAGATGCATTCCAACTTATATCGACAAGACTGAGGCACGCTCTTACGGGGGGATCAGCAGATTAGAATGCCCAAG
TTGAAG-AACCACCCACAGCCACATCTTCAGCACTTTC-CGATATGAATGGACATCCCTTCCTGGTAGTTTTTGATCGAT
TCCGTGTATTCCACATATTCAAGAGTGGTTAGGAGAGTTAGTTTGCCGGATGTGCCATGACTACCTGAAATTTACTTATA
TAGTACCAGTTTTTTATATTTGTGCCGACTGTTTTTTTTAGTTGAATAACAAAAGAACTAAAACTAAAAGATAAATCCCC
AATTTCCAGAAGGATAGGTGCCACGACAGAACGAGAATTGTGGCGGGTGTTCCAGAGGCCTACTACCTCCAGGCAGTCCA
TCTCCATGACGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CGTTGGTC
CATCCTCTTAGTTTTGCAAGAATAACGCCATCGCGCAAAGATAGCGCTTTGGCAATCAGAGGGTCCATGACACCGTTGTG
AGGCTTACACCAGGCCCCTAGAAACCTTGTCGAAGAACGATCCACACCACCTGCCCCTCCCTTCTCTAGAATGCTCTCAA
TACCAGCATCCGTGTTGATTTTCACAAAATCATCATCTGGGGGTCTCCACCCAAACCCAGGAAGGGTGAGGGTCTGTTCA
ATCGGAAGTTCCAGCACTACTGGAATCGCCACCTTTGCCGAGTGCCGGGAACACTCGGCAAAGGGCCAATAACCGCCGGC
AAAGCCTTTGCCGAGTGTTGCCTCGGCAAAAGGCCACCCGGCGTACACCCCTCAGGCAAACAAAAATCTGCCGAGAGCCA
AAACGTGGGCACTCGGCAAACAGTTTGCCGAGAGCCAAACGACGCCTCTCGGCTAAATAAATTGAACTTACGGACGGCGG
ACGGAGATGGCGCCAGCCATGTGGCACACCTTTGTCGAGTGCCCCTCTCTGCAAAGCGAACCACTAAGAAGCGGCCACGT
GCCGATGACTGGACATGTGGGTCCACAGCCTAGGCTGAGGGCCACCTTTGCCGAGAACCGCTCTCGGCAAAGATAACCAC
TAAGAAGTGGCC
>chr5D_1
ATGAACTAGGGTTTCACATAAACATGCAAAAATAGGGCAAATGTGATGATTTTTCGGATGAATTTTTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------------------------------
-----------AAGGAGAATACCTTACCTCCAGGGATGGATGTGGGACGAAATCCAGGAAAAATATCTTCAGATCTGACT
GATCTGGGTGAAGATTTGAGACAGGGAGAGAGGGGCGCCTCCACAGTGTTCTTCCTCTGTCTCTGTTTCTTTTCGTGCGG
GGGTGAGATGTGGATGGGTGCTTCATATTAGCAGTTCAGCAGAGGCACACACTTCTGGTGTGTTTCCTTGTATTTTGTCG
CCAGACTTGGAGGAGTTAGACATACACCGTGATGCAGTCATGGAGCACCATCGCTCTGGAAGATGAATGGCAAGCAGAGA
GAGCACAGTACGT-------------------------------------------------------------------
-----ACACAGTCTTGTATGT--TACGATCCAACACGTATATACGTACACGGTCTGGTATGTT-ATTAGGGTCCGACACG
TATATGTTAGGCT------CTCGGCCGAATTCGTGTCTAAAGCAGAATCGTATCAGGCCCGCAGGGCCCGAGTCGGTCTG
CACTTGCCGTGCCCAG------------CTCTGTATATAT-TTCCTTGCTCT--------ATATACTGTAAATAAAACCA
CATA-------------------A------------------------C---ACGGTCCATAAGCCCACACACGACATAC
GTCCGT------------GAACCACTGACACAAAGAAAGAAAGAAAGAAACCATGAACTGCCTACTACGGACCTCGCGCC
GCCTCCTCCTCGTCTGTAAGCAGGCAGGCGGCGTCCGCCGATTGGCGTCGCTGCTGCCGCCCCATGCAAACCCGGTGCCC
CGCTTCAATCAGTTGTACCGTAATCCGCGTACGATCGCTGCGGTGGCGGCCCTCACCTCAGGTGCCGAGGCTATGGCCGC
CTTGCGTCACTACGACCTCGAGGTTGTGCCATACACGAACCGCACGCACATCGTAATCAGGTCTCCTCAGTCCGAACGCC
AGCTCTGGGAGCCCCGCTACACAAAGCAGAAGAAAATCTGGGCTTCCAAATCACGGATCGTCGACCCGCTTCAC-CCGGA
CAGCGTTCGTGTACGTCGTATCGCCGAGAAAGTTATTCGCGCCACCTATCGTACCCTCCCTATCAACAGCAGCCACGATG
GCACCAAGAGCCCCAAGCCACAGACAAGTCATCTTGAGGGGTTTGAGTGGGAGGTGATACTTATCAAAGACAACAAGCCC
AATGCATTCTGCGTCCCTGGTGGCCATATTGCAGTAACCGCTGGATTGGTCGAACAATTTACAGATGCTGAGATTGCCTT
TGGTATTGCGCATGAGGTATGAAGTTTTAACATTTTTTATATAATAAATACTAATGAGTTTTA--TGTGTGTGGATTCCC
A------------------------GTGCATATTTTATGAGTTTTAT----GTAGGTGCATAATTTTCTCTCCTTTCTTT
TTTTTCAGATTGGTCACATAGTTGCTAGGCACTACTCGGAAGTTTGTTACGCCAAGTGGTCTCCAACACTCATGTTTTGG
CCTTTCATACGAAGGTATGCATGACTGCA-----------------A-----------------CACATACAT-------
---ACATGTACACATTATACTTGTATATATTGTATGCCCCAGAAATCATTTAGTCTTTAGGCTACGCCTCTTAATTAATT
AGTTGTGCTGCGAC------CTTATCCACAAATGGGAACTTCACTTTACAGCAGTAGCGAGAACGTAAGCATGGTAGATA
ATCTATATAAGCACATATATAACCC-TGAAAATCAGAGTGCGGTTTCAAGAATAACAAGAATAATGGGCAATTAAAAGAT
TAAGTTATTGTAAAATTA--------------------------------------------------------------
-----------------------CACTTCCTCTGATCCACATGATCCACATTAATTGTCGCAGCTTTAGTAACAATTGTA
TTAAAACTGCG---------------------------------------------------------------------
------------------------AGGCACGTCGCTCACCACGCCGCCGCCGGGGACTTGCCGCCGAGCTGCAGCCTACA
CCGAGGCCAC----------------------------------------------------------------------
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----------------------------------------------------CACATGTGTTGTTCCATGACTGCGCCGC
GTACATCATGTTCTGATGATCGATGTTGCCTATATATGTAGGTCCGAGATGGAGGCAGATCACATTGGAACCCTTCTACT
TGGAGCTGCTGGTTTCCATCCATGCACGTCCCTCTTATTCTTGAGGAAGGCCGCAATGATTGAAAGAGCGCTCTGGGTGC
CACGAGATTCCATCCCTCTTCATCCTTCACATAAGAGAAGGGTTGAGCATTTGTACCAACCCAAAATCATGGAGGAGGCG
ATGAAGTTATATAAGGAAGCTCCGCCCGACGAAGGCACCAGCTCACAAGCCACCGGTGAAGGTTTTTCCTTTCGACAAAC
CCTGGGAGATGCATGCAAACTTATATCGACAAGACTGAGACGAGTTCTTACGGGGGGATGAACAGATTAGAATGCCCAAG
TTGAAG-AACCACGCACAACCACATCTTCAGCACATTC-CGATATGAATGGACAT-------------------------
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>chr5B_694
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-----------------------------------------------------TCTGGTGTGTTTCCTTGTATTTTT--G
CCATACTTGGAGGAGTTAGACATACACCGTGATGCAGTCATGGAG---CATCGCTCTGGAACAAGCA-GGCAAGCAGAGA
GAGCACAGTACGTTTTTTTTTTTTGCGGGAAAGAGAGCACAGTACGTTTTTTTTTTTTTTTTTGCAGGCAGAGAGCACAG
TACGTACACAGTCTTGTATGT--TACGATCCAACACGTATATACGTACACGGTCTGGTATGTT-ATTAGGATCCGACACG
TACATGTTAGGCT------CTCGGCCGAATTCGTGTCTAATGCAGAATCGTATCAGGACCGCAGGGCCCGAGTCGGTCTG
CACCTGCCGTGCCCAG------------CTCTGTGTATAT-TTCCTTGCTCTA------TATACTGTAAAT----AACCA
CATA-------------------A------------------------C---ACGGTGCATAAGCCCACAAACGACACAC
GTCCGT------------GAACCACC-ACAC----AAAGAAAGAAAGCAACCATGAACTGCCTACTACGGACCTCGCGCC
TCCTCCTGCTCGTCTGTAAGCAGGCAGGCGGCGTCCGCCGACTGGCTTCGCTGCTGCCGCCCCATGCAAACCCGGTGCCC
CGCTTCAATCAGTTGTACCGTAATCCGCGTACGGT---------------CCTCGCCTCAGGTGCCGAGGCTATGGCCGC
CTTGCTCCACTACGACCGCGAGGTTGTGCCTTACACGAACCGCACGCACATGGTAATCAGGTCTCCTCAGTCCGAACGCC
AGCTCTGGGAGCCCCGCTACACAAAGCAGAAGAAAATCTGGGCTTCCAAATCACAAATCGTCGACCCGCTTCAC-CCGGA
CAGCGTTCGTGTCCGTCGTATCGCCGAGAAAGTTATTCGCGCCACCTATCGTACCCTCCCTATCAACAGCAGCCACGATG
GCACCAAGAGCCCCAAGCCACAGACAAGTCATCTTGAGGGGTTTGAGTGGGAGGTGATACTTCTCAATGACCACGACCAC
AATGCATTGTGCGCCCCTGGTGGCCATATTGCAGTAACCGCTGGATTGGTCGAACAATTTACAGATGCTGAGATTGCCTT
TGGTATTGCGCATGAGGTATGAAGTTTTAACATTTTTTATATAATAC-TAGTAATGATTTTTATGTGTGTGTGGATTCCC
A------------------------GTGCATATTTTATGAGTTTTAT--ATGTAGGTGCATAATTTTCTCTCCTTTCTA-
TTTTTCAGATTGGTCACATCGTTGCTAGGCACTACTCGGAAGTTTGTTTCGCCAAGTGGTCTCCAACACTCATGTTTTGG
CCTTTCATACGAAGGTACGTATGACTGCA-----------------A-----------------CACACACAT-------
---ACACGTACACATTATACTTGTAACCTT--------------------------------------------------
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--------------------------------------------------------------AAAAGAAA----------
-------------------------------------------------------------CGCAGAAATTACTTCGGTA
CGGATGAAATTACACATCTTA-------------------------------GCTCGGTCGAACGATTGGACCCTGGGCT
ACTAACAAAATTTTCTATATAAATATATAAGCCACGACAACATGGAACTCGCTCTTCAGCTAAGATTAATTGCTACAGTA
GGATAATCTTCAGTAAGAATTATTGGTTTCC-----TAA-----CACCGTAACACATGTGTTGTTCTATGACTGCGCCGC
GTACATCATGTTCTGATGATCGATGTTGTCTATATATCCAGGTCAGAGATGGAGGCAGATCACATTGGAACCCTTCTACT
TGGAGCTGCTGGTTTCCATCCATACGCGTCCCTCTTATTCTTCTGGAAGTCTGCAATGATTGAAAGAGCGTCCTGGGTGC
CACGAGATTCCATCCCTCTTCATCCTTCACATAAGAGAAGGGTTGAGCATTTGTACCAACCCAAAATCATGGAGGAGGCG
ATGAAGTTATATAAGGAAGCTCCGCCTGACGAAGGCACCAGCTCACAAGCCACCGGTGAAGGTTTTTCCTTTCGACAAAC
CCTGGGAGATGCATGCAAACTTATATCGACAAGACTGAGACGAGTTCTTACGGGGGAATGAACAGATTAGAATGCCCAAG
TTGAAG-AACCACGCACAGCCACATCTTCAGCACATTC-CGATATGAATGGACAT-------------------------
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>chr5D_818
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----------GTCTAGTATGTTATAGGATACGACACGTATATACGTACACGGTCTAGTATGTTAATTAGGATCCAACACG
TATATGTTAGTCTGTTAGACTCGGCCGAGTTCGTGTCTAAAGCAGAATCATATGAGGCCGGCAGGGCCCGAGTCGGTCTG
TACTTGCTGTGCCCAG------------CTCTAGCTATATCTTCCTTGCTCTA------TATA---TAAAT----AAGAA
CATA-------------------AGCCTACCAGCTGCCTACGTACACGC---ACGGTCCATAAGCCCACACACGACATAC
GTCCGTCTGTGAAGCCGTGAACCA--GACAC----AAAGAAAGAAAGAAACCATGAACTGCCTATTACGGAACTCGCGCC
GCCTCCTCCTCGTCTGTAAGCAGGCGGGCGGCGTCCGCCGACTGGCTTCGCTGCTGCCGCCCCATGCAAACCCGGTGCTC
CGCTTCAGTCAGTTGTGCCGTAATCCGCGTACGGTCGCTGGGGTGGCGGCCCTCGCCTCAGGTGCCGCGGCGATGGCCGC
CTTGGGCCGCTACGACCGCGAGGTTGTGCCTTACACGAACCGCACGCACATGGTCATCAGGTCTCCCGAGGCCGAACGCC
AGCTCTGGGAGTCCCGTTTCACAAAGGACAAGAAAACCTGGGCTTCCAAATCACAAATCGTCGACCCGCTTCAC-CCGGA
CAGCGTTCGTGTACGCCGTATAGCCGATAAAATTATTCGCGCCACCTATCGCACTCTCCCTATTAACAGCAGCCACGATG
GCACCAAGAGCCCGAAGCCACAGACAAGTCATCTTAAGGGGTGTGAGTGGGAGGTGATACTTGTCAAAGACCACTATACC
AGTGCAATGTGCGCCCCTGGTGGCAAAATTGTAGTATATACTGGATTGCTCGACCGTTTTACGGATGCTGAGATTGCCTT
TGGTATTGCGCATGAGGTACGTAGGTTTAACATTTATA--------------------------------------TAAT
AATTAATTACTAATGAGTTTTATGTGTGCATATTTTATGAGTTCT-T--ATGTAGGTGCATAATGTTCTCTCCTTTCTTC
TTTTTCAGATTGGGCACATCGTTGCCAGGCACAGCTCGGAAATTTGGTACGCCAAGTGGTTTCCGTTACCCTTGATTTTG
CCTTTCTTTCAAAGGTACGTATCACTGCAATTAAATAAATACACGA---------------------------GCGCGCG
CGCACACACAC----TATACT----TATATCATATGCCAGATAAATCATTTAGTCTT-----------------------
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-----------------------------------------------------------------------------CCT
GCCACTCACCGCGTACGATATGCTGTGGAAATTCGAAACCGATCCTACCTGATTATTATTAGAACAGAAA----------
-------------------------------------------------------------GGAGGAAATTACTTCGGTA
CGGATGAAATTATACATCTTAAAGCCACAAAAAAAAGAAATTATACATCTTAGCTCGGTCAAATGATTGAACCCTGGGTT
AGTAACAAAATTTTCTGTATAAATATATAAACCACGACAACATGGAACTCGCTCTTCAGCCAAGCTTAATTGCTACAGTA
GGATAATCTTGAGCAAGAATTATTGGTTTCC-----TAAAC--------TAACACATGTTTTGTTCTATAACTTTGCCGA
ATGCTTCATGTTCTGATGATCAATGTTGCCTGTATATGCAGGACGGAGATGGAGGCAGATCACATTGGAACCCTTCTACT
TGGAGCTGCTGGTTTCCATCCATACGCGTCCCTCTTGTTCTTCCGGAAGGCCGCAATGATTGAAAGAGCGTCCTGGACGC
CAGAAGATCCCATCGCTCTTCATCCTTCACATAAGAAAAGGGTTGAGCGTTTGTATCAACCCAAAATCATGGAGGAGGCG
ATGAAGTTATATAAGGAAGCTCCGCCCGACGAAGGAACCAGCTCACAAGCCACTGGTGAAGGTTTTTCCTTTCGACAAAC
CCTGGGAGATGCATGCAAACTTATGTCGACAAGACTGAGACAAGTTCTTACGGGGCGATGAACAGATTAGAATGCCCAAG
TTGAAGGAACCTCCCACATCCACATCTTCAGCACGTTCACGATATGAATGAACAT-------------------------
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------------
>chr5D_818
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----------GTCTAGTATGTTATAGGATACGACATGTATATACGTACACGGTCTAGTATGTTAATTAGGATCCAACACG
TATATGTTAGTC-------------------TGTGTCTAAAGCAGAATCATATGAGGCCGGCAGGGCCCGAGTCGGTCTG
TATTTGCCGTGCCCAG------------CTCT----ATATCTTCCTTG----------CTCTA---TAAAT----AAAAC
ATAAGCCTACCAGCTGCCTACGTA------------------------CAGTACGGTCCATAAGCCCACACACGACATAC
GTCCGTCTGTGAAGCCGTGAACCACCGACAC----AAAGAAACAAAGAAACCATGAACTGCCTATTACGGAACTCGCGCC
GCCTCCTCCTTGTCTGTAAGCAGGCAGGCGGCGTCCGTCGACTGGCTTCGCTGCTGCCGCCCCATGCAAACCAGGTGCTC
CGCTTCAGTCAGTTGTACCGTAATCCGCGTACGGTCGCTGCGGTGGCGGCCGTCGCCTCAGGTGCCGCGGCTATGGCCGC
CTTGGGCCGCTACGATCGCGAGGTTGTGCCTTACACGAACCGCACGCACATGGTCATCAGGTCTCCCCAGGCCGAACGCC
AGCTCTGGGAGTCCCGTTACACAAAGGACAAGAAAATATGGGCTTCCAAATCATGGATCGTCGACCCGCTTCAC-CCAGA
CAGCGTTCGTGTACGTCGGATCGCCGAGAAAGTTATTGGCGCCACCTATCGTACCCTCCCTATCAACAGCAGCCACGATG
TCACCAAGAGCCCCAAGCCACAGACAAGTCATCTTGAGGGGTTTGAGTGGGAGGTGATACTTATCAAAGACAACAGGCCC
AATGCATTCTGCGTCCCTGGTGGCAAAATTGCAGTATTCACTGGATTGCTCAAACATTTTACAGATGCCGAGATTGCCTT
TGTTATTGCGCATGAGGTATGTAGGTCTAACATTTTTTATA---------CTAATGAGTTTTA--TGTGTGTGGATTCCC
A------------------------GTGCATATTTTCTGAGTTTT-T--ATGTAGGTGCATAATGTTCTCTCCTTTCTTC
TTTTTCAGATTGGGCACATCGTTGCCAGGCACTGCTCGGAAATTTGGTACGCCAAGTGGTTTCCGTTACCCTTGATTTTG
CCTTTCTTTCAAAGGTACGTATCACTGCAATTAAATAAATACACACA-----------------CGCACACACGCGCGCG
CCCACACACACACATTATACT----TATATTATATGCCACATAAATCATTTAGTCTTTAGGCTGCGCCTCTTAATTATTT
AGTTGTGCTGCGCCTGAGCTCTTATCCTCAAATTGGAGTTTCACTTTGGAGCAGCAGCAAGAA--CAAGCATGGTAGATA
ATCCATATAAGCACATATATAACCC-TGAAAATCAGAGTGTGGTTTCAA-AATAACAAGAACAATGGGCAATTAAAAGGT
TAAGTTATTGTAAAATTATACTTCCTCCGATCCACATTAAATGTCACAACTTAGTAAAAATTGTATTAAAATTGCGACAA
TTATTATAAATCAGAGGGAGTAGTACTAGAATTGCACACACAAAAGAT---GTTAGCAAATTGCTACCTCGCAAGGGACC
TGGGCACCCACCGTGAGCGGACCGGTGCGCCGGCGGCGTGGTGAGCTGACAGGTGCGCAGCGCCGTCACGACCATGAGCT
GCAGCCTACACCGAGGCCACCGGCAGGCACGTCGCTCACCACGCCGCTGCCGGGGATTTGCTGCCGAGCTGCCGCCTACA
ACGAGGCCACCAGCAGGCACGTCACTCACCATGTCGCTGACCGGGACTTGCCGCCGAGCACCACGCCGTCGAGCCCACCT
GCCACTCACCGTGTACGATATGCTGTGGAAATTCGAAACCGATCCTACCTGATTATTATTAGAACAGAAATGGGGAGTGG
GCGAGCACATAATCCCCACGACCAACAAGAGATAACCGTTTGCGAGTAACCTTAACAGAAAGGCGGAAATTTCTTCGGTA
CGGATGAAATTATACATCTTA-------------------------------GCTCGGTCGAATGATTGGACCCTAGGTT
ACTAACAAAATTCTCTGTATAAATATATAAACCACGACAACATGGAACTCCCTCTTCAGCCAAGCTTAATTGCTACAGTA
GGATAATCCTGAGC------------------------------------AACACATGTGTTGTTCTATAACTTTGCCGT
GTGCATTATGTTCTGATGATCGATGTTGCCTGTATATGCAGGACGGAGATGGAGGCAGATCACATTGGAACGCTTCTACT
TGGAGCTGCTGGTTTCCATCCATACGCGTCCCTCTTGTACTTCCGGAAGGCCGCAATGATTGAAAGAGCGTCCTGGACGC
CAGAAGATCCCATCCCTCTTCATCCTTCAGATAAGAGAAGGGTTGAGCGTTTGTATCAACCCAAAATCATGGAGGAGGCG
ATGAAGTTATATAAGGAAGCTCCGCCCGACGAAGACACCAGCTCACAAGCCACCGGTGAAGGTTTTTCCTTTCGACAAAC
CCTGGGAGATGCATGCAAACTTATATCGACAAGCCTGAGACGAGCACTTACGGGGGGATCAACATATTAGAATGCCCAAG
TTGAAG-AACCACGCACAGACACATCTTCAGCACGTTC-CGATATGAATGGACAT-------------------------
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------------
>chr4A_863
--------------------------------------------------------------------------------
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---------------------------------------------------------TATGTTAATTAGGATCCAACACG
TACGTATATGC----TAGACTCGGCCGACTTTGTGTCTAAAGCAGAATCATATCAGGCAGGCAGGGCCCGAGTCGGTCTA
TACTGTACTTACCGCGCCCAGCTATATACTGTATATATCT-TTCCTTGCTCCCTCTATCTATA---TAAAT----AAAAC
ATAAGTCTACCAGCTGCCTACGCA------------------------C---ACGGTCCATAAGCCCACACACGACATAC
GTCCGTCTGTGAAGCCGTGAAGCACCGACAC----AAAGAAAGAAAGAAACCATGAACTGCCTACTACGGAACTCGCGCC
TCTTCCTCCATGTCTGTAAGCAGGCAGGCGGCGTCCCG--------------------------TGCAAACCCGGTGCTC
TGCTTCAATCAGTTGTACCGCAATCCGCGTACGGTCGCTGCGCTGGCGGCCCTCGCCTCAGGTGCCGAGGCTATGGCCGC
CTTGCGCCACTACGAGCGTGAGGTTGTGCCTTACACGAACCGCACGCACATCGTAATCAGGTCTCCTCAGTCCGAACGCC
AGCTCCGGGAGTCCCGTTACACAAAGCAGAAGAAAATATGGGCTTCCGAATCACGGATCGTCGACCCGCTTCACACCGGA
CAGCGTTCGTGTCCGTCGTATCGCCGAGAAAGTTATTCGCGCCACCTATCGTACCCTCCCTATCAACACCAGCCACGATG
GCACCAAGAGCCCCAAGCCACAGACAAGTCATCTTGAAGGGTTTGAGTGGGAGGTGATACTTGTCAAAAACCACAATCCC
GGTGCAGCTTGCGCTCCTGGTGGCAAGATTGCAGTATATACTGGATTGCTCGAACAATTTACGGATGCCGAGATTGCCTT
TGGTATTGCGCACGAGGTATGTAGGTTTAACACTTCTTATATAATAAATACTAATGACTGTTA--TGTGTGTGGATTCCT
A------------------------GTGCATATTTTATGAGTTTTATTTATGTAGGTGCCTAATTTTCTTTCCTTTT---
TTTGTCAGATTGGTCACATCGTTGCCAGGCACTACTCGGAAATTAGATACGCCGAGTGGTCTTCAACACTCATGTTTTAT
ACTTTCGCACACAGGTATGTATGACTGCAATTATATAAATATATAGA-----------------CACACACAT-------
---ACACGTACACATTATCCTTGTATATATTATATGCCCCAGAAGTCATTTAGTCTTTAGGCTACGCCTCTTAATTAATT
AGTTGTGCTGTGCC------CTTATCCACAAATTGGAACTTAACTTTACAGCAGCAGCTAGAACTAAAGCATGGTAGATA
ATCTATATAAGCACATATATACCCC-TGAAAATCACGGTGTGGCTTCAAGAATAACAAGGACAATAGGCAATTAAAAGGT
TAGGTTCTTGCAAAATTA--------------------------------------------------------------
-----------------------TACTAGAATTGCCCACACACAAAGGAAC----GCAAATTGCCACCACTCGAGGGACC
TGGGCACCCACCG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CGTCCAATTTGTTGTAGAAATTCGAAACCGCTCCTACCTGATTATTATTAGAACAGAAACAGGGAGTGG
GCTAGCACCTAATCCCCACGACCACCAAGAGATAACCGTTTGCGAGTAACCTTAAAAGAAACACAGAAATTACTTCGGTA
CGGATGAAATTATACATCTTA-------------------------------GCTCGGTCGAATGATTGGACCCTGGATT
ACTAACAAAATTTTCTATATAAATATATAAACCACGACAACATGGAACTCACTCTTCAGCTAAGCTTAATTGCTACAGTA
GGATAATCTTCAGTAAGAATTATTGGTTTCC-----TAAACTAACACGGTAACACATGTGTTGTTCTATGACTGCGCCGC
GTACATCATATTCTGATGATCAATGTTGTCTATATATGCAGGGCAGAGATGGAGGCAGATCACATTGGAACCCTTCTACT
TGGAGCTGCTGGTTTCCATCCATACACGTCCCTCTTATTCTTCAGGAAGGACGCAGTGATTGAAAGAGCGTCCTGGATGC
CACGAGATTCCATCCCTCTTCATCCTTCACATAAGAGAAGGGTTGAGCATTTGTACCAACCCAAAATCATGGAGGAGGCG
ATGAGGTTATATAAGGAAGCTCCGCCCGACGAAGGCACCAGCTCACAAGCCACCGGTGAAGGTTTCTCCTTTCGACAAAC
CCTGGGAGATGCATGCAAACTTATATCGACAAGACTGAGACGAGTTCTTACGGGGGGATGAACAGATTAGAATGCCCAAG
TTGAAG-AACCACACACAACCACATCTTCCGCACATTC-CGACATGAATGGACAT-------------------------
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>chr6D_2922
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----------------------------------------GTTGAATAACAAAAGAACTACAACTAGAAGATAAATCCCC
AATTTCCAGAAGGATACGTGCCACAACAGAACGGGAATTGTGGCGAGTGTTCCAGAGGTCTACTACCTCCGGGCAGTCCA
TCTTTTTTTTCCGCAAATACGCAAAGCTTGTGTATCATTTTATTGATAGAAGGAAAAAGAAAGAGTACAATAAAAAATAC
AACACATGACATGAACGCAAGAAGGAAAAATCATGGTGTCCGGCTTCGAATTGCCGTTGACGCCGGCCACCATCCTTCCA
TCCACGTAGGCTCTCTACCCCGCAGCCTCTCCGACCCCGTCCACCTACATGCCATGTCGGTTCCAAAGCTCGCGTTTTTC
CATCCTCTTAGTTTTGCAAGAGTAACGCCATTGCGCAAAGATAGCGCTTCGGCAATCAGAGGGTCTGTGACACCGTCGTG
AGGCTTGCACCAGGCCCCTAGAAACCTTGTCGAAGAACGAGCCACACCACCTGCCCC-CCCTTCTCCAGAATGCTATCA-
--------------------------------------------------------------------------------
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>SNPs
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------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-----S-------------------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
-S------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S---------------------------------------------S-----------------S--
-------------S---------------------------S-------------------------S------------
SS------S-----------------------------------------------------------------------
----------------------------------------------------------------S---------------
----S---------------------------------------------------------------------------
----------S-----------------------------------------------------S------S--------
-S---------------------------------------S--------------------S-----------------
--S-----------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--S-------------------------S------------------------------------------------S--
--------S--------------------------------------SSSSSSSSSSSSSSSSS----------------
--------------------------------------------------------S---------S-------------
--------------------------------------------------------------------------------
----------S--------------S-------------------------------------------------S----
S-------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------SSSSS-SSS-SS-S-SSS-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S----S---S-------------SSSSSS----------------------S---------------------
--------------------------------------------------------------------------------
-------------------------------------------------S-S-----S----------S----------S
---------S-----S-S--S------------SS-S-----SS------S--SSS---------------S-------S
S----SS----------------------------S---------S-----S---S------S-----------------
--------------S-S----------------------S--S------------------S------------------
----------------------------------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S-----S-------------
----------------S-------S--------S-----------S------------S-----------S---------
---SSS-SSSSS--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------SS--
---------------------S---------S-----------------S---------------SS---------S---
------S---------------------------------S----------------S--------S--------S---S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_697
--------------------------------------------------------------------------------
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-------------------------------------AGCAGAGGCACACACTTCTC-----------------------
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>reverse_1691
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----------ACCGAAGCCACAGACAAGTC--------------------------------------------------
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>forward_1374
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--------------------------------------------------------------------------GTGTTC
CGCTTCAGTCAGTG------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_3926
--------------------------------------------------------------------------------
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-----ATGACGACGTTGGTCCATCC-------------------------------------------------------
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------------
