>input_sequence_44745
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------------------------------------------AACGAATCATCCAAGATAGTAGCAGCTAATCCCGCATC
TCGATCTTTCGCGACGCCCACTTACTAGGTAC---------GTACGTGCGGGGATCGATCGATGGTGAGAGATCAGAAGG
CCATGGCGTCGCCGCCGGCCGCGCTCCCGGAGGACGTCGCGCTGGAGATCCTCGCGCGCGTGCCGGACGCCGCGGGCCTG
TTCCGCTGCGCCGCGGCGTGCAGGCGCTGGAGGACGCTGGTGGCCGACCCATCCTTCCTCCGTCGCCGCTGGCCGGACGG
CGCGCGCCACCCGTCCTCGCTCCTCGGCTTCTTCGGCCAGGAGTGGTGCCGCCGCCCCGGCGGAGAGGATCACGGGGACG
TCCCTGATTTGCCGGGCTTCGTCCGCGCGCCGGGGTCGGTCCTCGCGTCCGAACGCCCCTTCCTGGGCTCCTTCGTGCCC
GGCGCTGCCGGCATCTTCGACCGCGCGGTGCCGCTCGCCTCGCATCGCGGCCTCCTCCTCGTGCGCTTCGTCCCAGCCGG
CGGCGAGTCA---------------AGCGCCGACGTGGACCACCTGGCTGTGTGCAACCTGCACTCCGGCGCGTGCGACG
TGCTCCCGCCGCTCGAGCGGGGCTGGTTCTTCGACTACGTGGACGCGAGCGCGTACGCCGTCGTGAACCAGGGGCCGACG
TCCTTCAAGGTGTTCATCGTCGGCTACAACAACGAGGGCAGCCAGCAGTACGACCTCCGCACGTTCTCGTCCGGCGGCGA
GCCGAGCTGGAGCGCGCCCAGCAAGCTCTTCAACCCGATAGAGCACGGCATCTTCGGGCCGTTGAAGCAGCGCGGCGCCG
TGGTGGGCCACGGGACGGTGCACTGGCTCATCTGGGACCTGGTCGACTTCCACGCCATCGACGTGGACGCCATGACCGGC
CGCGTGACCCTACAGAAGCTCCCGGCCCCGAGGCCGCGCGACATGGAATACCACCTCTACGACACGCCACGCCTGCGCGT
CGCGGCCGATGAGACGGCGCTTTCGTCGATCTGCCTGTTCAGGGAGCCCCTCCGAGTAGAGACCTGGACGAGGGGGGACG
GCGGCGAG------------CATTGCGGCCGAGAGTGGTGCCGCGCTAGGGTGGTGGAGCTGCGACCACCCGGGCAGAAG
CAAATCGACACGCCGGTGTGCATGTGCTTGGGGGAGAGGAGCGGCACGCTGCTCATCAAGGACCTTCACCGGTGCATGTA
CATCGCGGATCTGGAAAGTGGCGCCATGGAGGAGACGACGGACAAGCAGTTTTGCCGTGGCCTCGACGGCTGCAAGACGG
CGTTCCCCGTAGAGATCGACTGGCCTGCCTTCTTCATGTGTCGCCTTGGTGGAAAGTCAGATGTTTAATCTGGCGACAAG
TGCGGCAAACTTTGAAGCTTAC---AATAATGCTTCTGGCTTCTTTAGAAAAACATGATTCTATTTTTGAACTAATTGTC
CAATCTATACTTCATTTGCATATTTC-TGTTCTTGAGAATTAGGACTTC-----------------------------GA
AATAAGACAACTCTATAACCTATTTTGACAACTTTTAAAATTTGAATTCTCAATCATGGTGAAGCAAAGATAAAATATGC
AAATATATTATAAACTGGACAATCGGTCAAAAGGATAAAACATATTCAAGCTTGGAGATCACGTG-AAAAAGTAGGGGCA
GATGAAGCATTGCATATCTTGGTGGGTGGAGCACATGCTCCTTGTCTCCACACTTTTGGTAACAATAAA-----------
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>chr3A_1_TraesCS3A01G447400
GTAACCTTCCAGACATGTTTCTGGAGGTTCAAACCCACCACAATTCCATACGGCCAGCCTCATGGTGGTAGTT-GGGGTG
ATTACCTGGAGTGTATGGAATATTCATAATAAACTTGTGATTGAACATGTGATCACTCGTCTGGCTACTGATGCTATTTG
CCAAATGTGCGGATTTTTGCAACTATGGAAGCCACTTAGCAAGCGGCATGCTCGAGACGATATCAACCAGATCACCGTGG
ACCTTCGCTCCATCGTTGCGCGTCTTGCACCACCGCTTCCTCCGCCTCCGCCCGAGCCGGATTTGTTGCTTTGTTTTTAT
TCAGGG-TTGTGTTATGCTGAGCCCCTAGCAAGACTTTGTTTGTTTGTCTTATTTTCTCGCAACTTGAACTCCCCATATG
TCGTACGAACCTTCTTGTTGGCCGTTGCGTTATAATCCAAAGTGGGGAAAACTCGTTTTCGTCATATGTTAGACTCCTGT
AGGTGCT-------------------------------------------------------------------------
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----------------------------------------------------------TGCAAATTTTTGTGACGAAATG
ACCTTGGTAGAAAGAAAAACAAAATCGGATCTAGAAATTATTTCACACCACCTGATAATTTGAAGCTCAGTTTTTTTTTT
TGTACCGAGCTCCTCTGATCTCATCTAAGCACGAATTTTTGCAAGCATGTAGTGTACAAGAGTTGAGCGTCTTTGATGTA
CAAATATTTCAGATCCTTTCGATATTTTTGCTATTTCAT-----------------------------------------
-------------------TTGAATTTACTATTCATCGGGAACATATGACCCACGGATCAGCTAG---TACTATGAATTA
CCGAGCTTATAGTATTTAC-------------------------------------------------------------
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--------------------------------------------------------------TTAAGTGGACAAATTGTC
TCTCCGTGCTAATGACTTGCGTGCAGTAATAATCCCAGGATTAACTTGAGACGAGTCGGAATAGTACTAAGCCGAGATTA
-AATTACAAAAGTAGCAC--------------------------------------------------------------
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----------------ACTTTATGAACCGTGACATGCCGGGGCAGTCGGACCCGGACCGGCGATTACGCAGACGTAATCG
TG--TTCACTATATAATGCGGCGCCCTC-TG-ATCGACCAGCAACGAATCATCCAAGATAGTAGCAGCTAATCCCGCATC
TCGATCTTTCGCGACGCCCACTTACTAGGTAC---------GTACGTGCGGGGATCGATCGATGGTGAGAGATCAGAAGG
CCATGGCGTCGCCGCCGGCCGCGCTCCCGGAGGACGTCGCGCTGGAGATCCTCGCGCGCGTGCCGGACGCCGCGGGCCTG
TTCCGCTGCGCCGCGGCGTGCAGGCGCTGGAGGACGCTGGTGGCCGACCCATCCTTCCTCCGTCGCCGCTGGCCGGACGG
CGCGCGCCACCCGTCCTCGCTCCTCGGCTTCTTCGGCCAGGAGTGGTGCCGCCGCCCCGGCGGAGAGGATCACGGGGACG
TCCCTGATTTGCCGGGCTTCGTCCGCGCGCCGGGGTCGGTCCTCGCGTCCGAACGCCCCTTCCTGGGCTCCTTCGTGCCC
GGCGCTGCCGGCATCTTCGACCGCGCGGTGCCGCTCGCCTCGCATCGCGGCCTCCTCCTCGTGCGCTTCGTCCCAGCCGG
CGGCGAGTCA---------------AGCGCCGACGTGGACCACCTGGCTGTGTGCAACCTGCACTCCGGCGCGTGCGACG
TGCTCCCGCCGCTCGAGCGGGGCTGGTTCTTCGACTACGTGGACGCGAGCGCGTACGCCGTCGTGAACCAGGGGCCGACG
TCCTTCAAGGTGTTCATCGTCGGCTACAACAACGAGGGCAGCCAGCAGTACGACCTCCGCACGTTCTCGTCCGGCGGCGA
GCCGAGCTGGAGCGCGCCCAGCAAGCTCTTCAACCCGATAGAGCACGGCATCTTCGGGCCGTTGAAGCAGCGCGGCGCCG
TGGTGGGCCACGGGACGGTGCACTGGCTCATCTGGGACCTGGTCGACTTCCACGCCATCGACGTGGACGCCATGACCGGC
CGCGTGACCCTACAGAAGCTCCCGGCCCCGAGGCCGCGCGACATGGAATACCACCTCTACGACACGCCACGCCTGCGCGT
CGCGGCCGATGAGACGGCGCTTTCGTCGATCTGCCTGTTCAGGGAGCCCCTCCGAGTAGAGACCTGGACGAGGGGGGACG
GCGGCGAG------------CATTGCGGCCGAGAGTGGTGCCGCGCTAGGGTGGTGGAGCTGCGACCACCCGGGCAGAAG
CAAATCGACACGCCGGTGTGCATGTGCTTGGGGGAGAGGAGCGGCACGCTGCTCATCAAGGACCTTCACCGGTGCATGTA
CATCGCGGATCTGGAAAGTGGCGCCATGGAGGAGACGACGGACAAGCAGTTTTGCCGTGGCCTCGACGGCTGCAAGACGG
CGTTCCCCGTAGAGATCGACTGGCCTGCCTTCTTCATGTGTCGCCTTGGTGGAAAGTCAGATGTTTAATCTGGCGACAAG
TGCGGCAAACTTTGAAGCTTAC---AATAATGCTTCTGGCTTCTTTAGAAAAACATGATTCTATTTTTGAACTAATTGTC
CAATCTATACTTCATTTGCATATTTC-TGTTCTTGAGAATTAGGACTTC-----------------------------GA
AATAAGACAACTCTATAACCTATTTTGACAACTTTTAAAATTTGAATTCTCAATCATGGTGAAGCAAAGATAAAATATGC
AAATATATTATAAACTGGACAATCGGTCAAAAGGATAAAACATATTCAAGCTTGGAGATCACGTG-AAAAAGTAGGGGCA
GATGAAGCATTGCATATCTTGGTGGGTGGAGCACATGCTCCTTGTCTCCACACTTTTGGTAACAATAAAACATGAAGCTG
ATGTTCTCTTCCTCTAT---CACTTGCTCCATTTTCTTGCTGATGAGGTCAAGAGTGAATATTCTACGTACCACACTTCT
TTTGCCCCACGAGTACTACACATGTGCTCTCTGCAAAGGACAAGATTTCAATTCCCTCGACTTGCCGGGGCATCAGCTCG
GACCGCACCCATCCTTCCATACCCTCATAGCTATGATCATTGTCTTGTTCTTGCTTGGTCCAAAGTTCAAGGATATATTT
T-TCTCTGATATGAAAAAATGAAAGCTTTTCTTTCTCAAGGATGCATGGGAACGGGGGTGGCAAGCCATGTTTGATTTTA
ATTGGGATCTTGGCTAA---------------------------------------------------------------
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---------------------------------------------------------------------GGTAACATTTG
TCGTGTCAGCAGTTATATATGTTGAGCGTGTAGAAGTTTGTATTGTCTCAGTACAACCAATGCACAATGTCACCGTTCAC
CACGCCGGCGCGCGGCCCAGACACTACCGGATTCGCAACCTATGCCGACGGCCCGTGGCCGTCGGCATAGGCCGACTGCC
GTCGGCTTAGATCTATGCTGACGGCGGCCGTCAGCATACCCCCGTCGGCATAGATCACGTCAGCGTAGTCTGCCAGACCG
TCGGCATAGTTTAGCCGTCGGCATAGGGACCTATGCCGACGGCTTTCGTACGGCTGTCGGCATAGTTTAGCCGTCGGCAG
AAATTTTCACCTGACAGCAACAAACGGCGCCGTCAAAAGCGCTGACGAATCATGGACCACCGCGTGGCAGAGGTATGCCG
ACGGCCAAGCCGTCAGCATAGATGAAAATCTATGCCGACGGTCAGGCCGTCGGCATAAATCTGCCACGCGGCAGCCGCTG
GGCGCTCCTGTCAGCATCTATGCCGACGGCCTGGCCGTCGGCATAGA--TGCTGCCACGTGTCATAGCATGCGAGCTCTG
GTTGCATGTCTATGCGGACAGCAAAGCCGTCGGCATAGTCAAGCTATGCCGAGGGCAATGCCGTCGGCATACTTGCTGCC
CAGAAGC
>chr3B_1
GTAACCTTCTAGACATGTTTCTGGAGATTCAGACCTACCACACTTCCATACGGCCAGCCCTAAGGTGGTAGTTGGGGGTG
CTTATCTGGACTGTATAGAATATTCATAATAAACTTGTAATTAAACTTGTGATCACTCGTCCGGCTACTGATGCTTTTTG
CAAAATATGCGGATTTCTGCAGTTATGGAAACCGCTTAGCAAGCGACATGCTCGAGACGACATCGACCAGATCACCGTGG
ACATTCGCTCCACCCTTGCGCGTCTTGCACCACCACTTCATCCGCCTCCGCCCGAGCCGGATTAATTGCTTAGTTTTTAT
TCAGGGTTTGTGTTATGCCGAGCCCCTAGCAAGACTTTGTTTGTTTGTCTTATTTTCTCGCAACTTGAACTCTTCATATG
TCGTAAGAACCTTCTTGTTGGCCGTTGCGTTATAATCTAAGG---------CTCGTTTTCATCATATGTTAAACTCTTGC
AAAAA---------------------------------------------------------------------------
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------------------------------------------------------------------TTTGTGACGAGATG
ACCTTGGTAGAAAGAAAAACAAAATCGGAGCTCGAAATTTTTTCACACCACCCGACATTTGGAAGCTTAG---TTTTTTT
TGTACCGAGCTCCTCT-----CATCTATGCACGAAATTTTGCAAGCATGTAGTAG--AAGAGTTGAGCGTCTTTGATGTA
CAAAATTTTTAGATTCTTTTGATATTTTTGCTATTT--------------------------------------------
----------------TAATTGAATTTATTATTCTTCTGAAACATATGACCCA---------------------------
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>chr3D_70
---------------------------------------------------------------------AGTT-GGGGTG
CTTACCTGGACTGTATGGAATATTCATAATAAACTTGTGATTGAACATGTGATCACTCGTCTGGCTACTGATGCTATTTG
CAAAATATGCGGATTTTTGCAGCTATGGAAGCCACTTAGAAAGCGGCATGCTCGAGACGATATCGACCAGATCACCACGG
ACCTTCGCTCCATCGTTGCGCGTCTTGCACCACCGCTTCCTCCGCCTCCACCCGAGCCGGATTAGTTGCTTAGTTTTTAT
TCAGGG-CTGTGTTATGCTGAGCCCCTAGCAAGACTTTGTTTGCTTGTCTTATTTTCTCGCAACTTGAACTCCCCATATG
TCGTACGAACCTTCTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAATTTTTTGT-ACGAGATG
ACCTTGGTAGAAAGAAAAACAAAATCAGATCTGGAAATTTTTTCACACCACCGGACAATTTGAAGCTTAGT--TTTTTTT
TGTAGCGAGCTCCTCTGATCTCATCTAAGCACGGAATTTTGCAAGCATGTAGTAG--AAGAGTTGAGCGTCTTTGATGTA
CAAAAATTTCAGATCCTTTTGATATTTTTGCTATTTTATTTGAATTTACTATTCACCGGGAACGTATGACCCACGGATTT
GATATTTTTGCTATTTTATTTGAATTTACTATTCATCGGGGACGTATGACCCAGGGATCAGCTAGTACTACTATGAATTG
CCGAGCTTATATTTACTTATTCACAATAGCTACATGTAAGTTGACTGAATTTACAATTTGAGTAAGTCAGATTTTGTAAA
AGCATGAACGGTTGAAGGAGGAAGCAAGTTGGAGGAAGAAGAAAGAAGGTCGACCGTTGAATCTTTAATCTATTGGCTCA
GAAAATCGACTTACCCCAAAATAAATTTTCAGGCGACTTACATATAGCCTGTCCCTTACTTATTAAGTGGACATATTGTC
TCTCCGTGCTAATGACTTGCGTGCAGTAATAATCCTAGGATTAACTTGAGACGAGTCGGAATAGTACCAAGCCGTAAGAA
TAAATTACGAAACTACTCCCTCTGTTATTAAATATTTGTCTTTGTAGAGATTTCAAACGGACTACCACATACGGATGTAT
ATAAATATATTTTAAAGTGTAGATTCACTCATTTTGCTTCGTATGTAGTCACTTGTTGAAATATCTAGAAAGACAAATAT
TTAGGAATGAGGGAGTACTTTATGCAGCGTGACATGCCGGGGCAGTCGGACCCGGACCGGCGATTACGCAGACCAAATCT
TG--TTCACTATATAATGCGGCGCCCTCTTG-ATCGATCAGCAACGAATCATCCAAGATAGCAGCAGCTAATCCCGCATC
TCGATCTTTCGCGACGTCCACTTACCA--TAC---------GTACGTCCGGGGATCGATCGATGGTGAGAGATCAGAAGG
CGATGGCGTCGCCGCCGGCCGCGCTCCCGGAGGACATCGCGCTGGAGATCCTCGCGCGCGTGCCGGACGCGGCGGGCCTC
TTCCGCTGCGCCGCGGCGTGCAGGCGCTGGAGGACGCTGGTGGCCGACCCGTCCTTCCTCCGCCGCCGCTGGCCGGACGG
CGCGCGCCACCCCTCCTCGCTCCTCGGCTTCTTCGGCCAGGAGTGGTGCCGCCGCCCCGGCGGAGAGGATCGCGGGGACG
TCCCTGATTCGCCGGGCTTCGTCCGCGCGCCGGGGTCGGTCCTCGGGTCCGAACACCCCTTCCTGGGCTCCTTCGTGCCC
GGCGCCGCCGGCATCTTCGACCGCGCGGTGCCGCTCGCCTCGCATCGCGGCCTCCTCCTCGTGCGCTTCGTCCCAGCCGG
CGGCG------CGGGCGCGGACCCGAGCGCCGACGTGGACCGCCTGGCCGTGTGCAACCTGCACTCCGGCGCATGCGACG
TGCTCCCCCCGCTCGAGCGCGGCTGGTTCTTCGACTACGTGGACGCGAGCGCGTACGCCGTCGTGAGCCAGGGGCCGGCG
TCCTTCAAGGTGCTGATCGTCGGCTACAACAACGAGGGCAGCCAGCAGTACGACATCCGGACGTTCTCGTCCGGCGGCGA
GCCGAGCTGGAGCGCGCCGAGCAAGCTCTTCAACCCGATAGAGCACGGCATCTTCGGGCCGTTGAAGCAGCGCGGCGCCG
TGGTGCGCCACGGGACGGTGCACTGGCTCATCTGGGACCTCGTCGACTTTCACGCCATCGACGTGGACGCCATGACCGGC
CGCGTGTCCCTGCAGAAGCTCCCGGCCCCGAGACCGCGCGACATGGAATACCACCTCTACGACACGCCACGCCTGAGCGT
CGCGGCCGACGAGACGGCCCTGTCGTCGCTCTGCCTGTTCAGGGAGCCCCTCCGAGTAGAGACCTGGACGAGGGGGGACG
TCTGCGAGGAGGGCGATGGGCATTGCGGGCGAGACTGGTGCCGTGCTAGGGTGGTGGAGCTGCGACCACCCGAGCAGAAG
CAAATCGACACGCCGGTGTGCATGTGCTTGGGGGAGAGGAGCGGCACGTTGCTCATCAAGGACCTTCACCGGTGCATGTA
CATCGCGGATCTGGAAAGTGGCGCCATGGAGGAGACGACCGACAAGCAGTTTTGCCGTGGTCTCGACGGCTGCAAGACGG
CGTTCCCAGTGGAGATCGACTGGCCTGCCTTCTTCAAGTGTCGCCTTGGTGGAAAGTCAGGTGTTTAATTTGGCGACAAG
CGCGGCAAACTTTGAAGCTTATGATAATAATGCTTCTGGCTTCTTTGACAAAACATGATTCTATTTTTGAGCCAATTGTC
CAATCTATACTTCATTTGCATATTTTGTGTTCTTGAGAATTAGGACTTCTTTTTGCGGAGCTCGAAAACTAGGACTTCGA
AATAAGACAGCTCTAGAACCTATTTTGACAAGTTTTGAAATTTGAATTCTGAATCATGGTGAGACAAAGATAAAATATGC
AGACATGTTATAAATTGGACAATCAGTCAGAAAGATAAAACATATTCAAGCTTGGAGATCACGTGAAAAAAGTAGGGGCA
GATGAAGCATTGCATATCTTGGTGGGTGGAGCACATGCTCCTTGTCTCCCCACTTTTGGTAACAATAAAACATGAAGCTG
TTGTTCTCTTCCTCTATGATCACTTGCTCCATTTTCTTGCTGATGAGGTCAAGAGTGAATATTC----TACCACACTTCT
TTTGCCCCACGAGTACTACACATGTGCTCTCTGCAAAGGACAAGATTTCAATTCCCTCGACTTGCTGGGGCATCAGCTCG
GACCGCACCCATCTTTCCATACCCTCACAACTATGATCATTGTCTTGTTCTTGCTTGGTCCAAAGTTCAAGGATATTTTT
TCTCTCTGATATGAAGAAATGAAAGCTTTTCTTTCTCAAGGATGCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAACATTTG
TCGTGTCAGCAGTTAT----GTTGAGCGTGTAGAAGTTTGTATTGTCTCTGTACAACCAATGCACAATGTCACCGTTCAC
CACGCCGGCACGCGGCCCAGAC----------------------------------------------------------
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>chr3B_778
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-------------ATTTGC-------------------------------------------------------------
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--------------------------------------------------------------TTAAGTGGAAAAATTGTC
TCTCCGTGCTCATGTCTTGCGTGCAGTAATAATCCCAGGATTAACCTGAGACGAGTCGGAATAGTACTAAGCCGTAAGAA
TAATTACGAAAGCAGTAC--------------------------------------------------------------
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----------------ACTTTATGCAGCGTGACATGCCGGGGCAGTCGGACCCGGACCGGCGATTACGCAGACGTAATCG
TGTCTTCACTATATAATGCGGCGCCCTCTCTAATCGATCAGCAACGAATCATCCAAGATAGCAGCAGCTAATCCCGCATC
TCGATCTTTCGCGACGTCCACTTACCA--TACCATACATACGTACGTGCGGGGATCGATCGATGGTGAGAGATCAGAAGG
CCATGGCGTCGCCGCCGGCCGCGCTCCCGGAGGACGTCGCGCTGGAGATCCTCGCGCGTGTGCCGGACGCCGCGGGCCTC
TTCCGCTGCGCCGCGGCGTGCAGGCGCTGGAGGACGCTGGTGGCCGACCCGTCCTTCCTCCGCCGCCGCTGGCCGGACGG
CACGCGCCACCCCTCCTCGCTCCTCGGCTTCTTCGGCCAGGAGTGGTGCCGCCGCCCCGGCGGAGAGGGTCACGGGGACG
TCCCTGATTCGCCGGGCTTCGTCCGCGCGCCGGGGTCGGTCCTCGGGTCCGAACGCCCCTTCCTGGGCTCCTTCGTGCCC
GGCGCCGCCGGCATCTTCGACCGCGCGGTGCCGCTCGCCTCGCACCGCGGCCTCCTCCTCGTGCGCTTCGTCCCAGCCGG
CGGCGCGGGCGCGGGCGCGGAGCCGGGCGTCGACGTGGACCACCTGGCCGTGTGCAACCTGCACTCCGGCGCGTGCGACG
TGCTCCCGCCGCTCGAGCGCGGCTGGTTCTTCGACTACGCCGACGCGAGCGCGTACGCCGTCGTGAACCAGGGGCCCACG
TCCTTCAAGGTGCTGATCGTCGGCTACAACAACGAGGGCAGCCACCAGTACGACCTCCGGACGTTCTCGTCCGGCGGCGA
GCCGAGCTGGAGCGCGCCCAGCAAGCTCTTCAGCCCGATGGAGCACGGCATCTTCGGGCCGTTGAAGCAGCGCGGCGCCG
TGGTGCGCCACGGGACGGTGCACTGGCTCATCTGGGACCTGGTGGACTTCCATGCCATCGACGTGGACGCCGTGACCGGC
CGCGTGTCCCTGCAGAAGCTCCCGGCCCCGAGGCCGCGCGACATGGAATACCACCTCTACGACACGCCACGGATAAGCGT
CGCGGCCGACGAGACGGCGCTATCGTCGCTCTGCCTTTTCAGGGAGCCCCTCCGAGTAGAGACCTGGACGAGGGGGGACG
GCGGCGAG------------GAGTGTGGCCGAGACTGGTGCCGAGCTGGGGTGGTGGAGCTGCGACCACCCGGGCAGAAG
CAAATCGACATGCCGGTGTGCATGTGCTTGGGGGAGAGGAGCGGCACGTTGCTGATCAAGGACCTTCACCGCTGCATGTA
CATCGCCGATCTGGAAAGCGGCGCAATGGAGGAGACGACCGACAAGCAGTTTTGCCGTGGTCTCGACGGCTGCAAGACGG
CGTTCCCAGTGGAGATCGATTGGCCCGCCTTCTTCACGTGTCGCCTTGGTGGAAAGTCAGATGTTTAATTTGGGGACAAA
TGCGCCAAACTTTGAAGCTTAC---AATAATGCTTCCGGCTTCTTT----------------------------------
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>chr5B_3169
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----------------CCAGGCACTACCGGATTTGCCACCTATGCCGACGGCCACGGGCCGTCGGCATAGGCCGTTTGCC
GTCGGCTTAGATCTATGCTGACGGCGGCCGTCGGCATACCCCCGTCAGTATAGATCACGTCAACGTAGTCTGTCAGACCG
TCGGCATAGTTTAGCCATCGGCATAGGGACCTATGCCGACGGCTTCCTTATGGCCGTCGGCATAGTTTAGCCGTCGGCAG
GAATTTTCACCTGACGGCAACAGACGGCGCCGTCAAAAGCGCTGACGAATCACGGGCCGCCGCGTGGCAGAGGTATGCCG
ACGGCCAAGCCGTC-------------------------------------GGCATAAATCTGCAACGCGGCAACCGCTG
GGCGCTCCTGGCAGCATCTATGCTGACGGCCTGGCCGTCGGCATACCTCTGCTGCCACGTGTCATGGCATGCGAGCTCTG
GTCGCATGTCTATGCGGACAGCAAAGCCGTCGGCATAGTCAAGCTATGCCGAGGGCAATGCCGTCGGCATACTTGCTGAC
TAGAA--
>chr4A_3174
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---------------------CACTACCGGATTCACCACCTATGCCGACGACCATGGGCCGTCGGCATAGGTCGTTTGCC
GTCGACTTAGATCTATGCCGACGGCCT--------------CCATCGGCATAGATCACGTCAGCGTAGTTTGTGAGACTG
TCGGCATAGTTTAGCCATCGGCATAGGGACCTATGTCGACGACTTCCGTACGGCCGTCGGCATAGTTTAGCCGTCGGCAG
TGATTTTCACCTGACGGCAACGGACGACGCCGTCAAAAGCGCTAACGAATGACGGGCCACCGCCTGGCAGAGGTATGCCG
ACGGTC--------------GATGAAAATCTATGCCGACGGCCAAGCCGTCGGCATATCTGTTGTACGTGGCAGCCGCTG
AACGCTCCTTGCAGCATCTATGCTGACGGCCTGGCTGTCGGCATACCTCTGCTGCCACGTGTCATGGCATGCGAGCTCTG
GTTGCATGTCTATGCGGACAGCAAAGCTGTCGGCATAGTCAAGCTATGCCGAGGGCAATGCCGTCGGCATACTTGCTGAC
GAGAAGC
>SNPs
---------S----------------S----S---S------S----------------SS-S-----------------
S---------S---------------------------------------------------------------------
-S----S--------------S------------------------------------------S---------------
---------------------------------------------------------------S-------S--------
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-------------------------------------S--S-SSSSSSSSS---------S----------S----S--S
-SSSSSS-------------------------------------------------------------------------
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---------------------------------------------------------------S------------S---
--------------------------------S------S------------S--S-----------S---SS-------
-----------------------------------S-----------------SSSS-----------------------
----S--------------S----------------S-------------------------------------------
-----------------------------------------------------S-------------------------S
-----------S-----S--------------------------------------------------------------
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--------------------------------------------------------------------------SS-SS-
-------S----S-------------------------------------------------------------------
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------------------------S-S-----------------------------------------------------
-------------------------------------S-----------------------S------------------
----------------S--------S-SS---------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------S-----------S-----------------
------------S-------------------------------------------------------------------
---------S-----------------------------------S----------------------------------
-----S--------------------------------------------------------------------------
-----S-SSS--------------------------------------S-------------------------------
-------------------S------------------------------------------------------------
------------S-S--------------------------------------------S--------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------S----S---------------------------------------------------------------S----
---------S-----------S------S---------------------------------------------------
----------------------------------S--------S------------------------------------
------------------------------------------------S-------------------------------
---------------------------------------S--------------------S-------------------
-------S--S-------------------------S--------------------------------S----------
----------------------------------------------SSS---------------------S-S-------
-------------------------S------------------------------------------------------
---------S-----S---------------S----S-------------S-----------SS----------------
-S-S--S-------S---------S----S--S-----------------------------------------------
-------------------------------------------------S------------------------------
S---------------------------------------------------------------SSSS------------
-----------------------------------------------------------------S--------------
-------------S-------------S-S----------------------------------------------S---
---------------S--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS---------------------------------------------------------------
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----------------SSSS-----------------------------S------------------------------
---------S--------------------------S----------------SSS------------------SS----
--------------------------------S---------------------------------------S-------
----------------S----------------------------S--------S-------------------------
S--------------S------S-----------------------------S--S------------------------
--------------SSSSSS---------------------S--S-------------------S---------------
----------S------------S---------------------SS------------------S--------------
------------------------------------------------------------------------------S-
S------
>forward_61
-----------------------------------------AATTCCATACGGCCAGCCTC-------------------
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>reverse_2335
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--------------CATCGTCGGCTACAACAACG----------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>forward_312
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CGAGCCGGATTTGTTGCTTT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>reverse_2968
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CGTAGAGATCGACTGGCCTG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>forward_1697
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATC
TCGATCTTTCGCGACGC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
>reverse_3737
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GGTGGCAAGCCATGTTTGAT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------
