>input_sequence_44744
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---------------------------------------------ATGGAGAAGGAAGCGACGACGCCGCGGCCGGTGTG
CGCGCAGGAGGCGCTGGCGCTGCTCAACTGCGCCGCCGAGAACCCCTACGACCGCGACAAGTGCCTCGCCCTCCTCGACG
CGCTCCGGGAGTGCATCGCCCAAAAGGTAATTATAGGCCCAAGTGCATC---GCGTTTGGTGGACCGTTTGCTCATTCTT
GCCGATACAACTATGATTGATACAAACTATGATTTGTGATCCTGTACTGAAGGTCTTACATCTTAATAATTCCTTGGAAG
G--AAGATATTACCCACCACTGAGTAATCTTATCTTTGTGCCTAGCTGTTTTTAGGATGGACAATTG---TGGGACTCCA
TAGCTCCCAAACATGTGTATCTCACATCAT-TGCTTCCGTGTAATTTCGAGCAAAATGAGCACCATGTCACATAATTCCT
TGTCCAGTTGGAACAATCTTGCATGCTAAAGGGATACATACTTTTGTTGGATGGTAGAGATATCAACTTGCCGATCAAAG
CCTGGTTAAGTGTGAGAAGTTAGAAAGGCTTAGTTAAATCACTTGTTTGTACTCGGAGTTACAAGTCTGAAACTACTTGT
CTGTACCACTTAGCCAGTAA---CAATTTATTAGTGCTCGAGGTAATTCCCCTTTGAAA-AGCAAAGTGGAAATAC-CAA
AGTCTTTTAATAGTTTGTCTCCTTTGAGGATTCTGTGATATTCGGTACCGGTAGTTAAATGACGCCGTATTATTAAAAAG
CAACTTGTCTAAAATATGTTCGTCAGGTGGATATGTGTTAT-----CTAGCAGAATGACTACTCCAAAAAGTTATCAACA
ACAACAACAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTAGGCTAGAGCTGAAACTCATAAGATCTTTCTTTTGGG
TTTCATCTCCATAAGAGTGGCTGAGTTTTGACGTTGGCTCGCCAAGCCTATCACAACCCTCCTCCTTTACCCGGGCTTGG
GACTGGCTATGTCGAGAAAACATAGGCGGAGTTCCAAAAAGTTATCAAAACATGCAAAATAAATTGACAACACGAGATGC
ACCTATTATGTCATGACATTTTTAAC----------------ACATTGAGAGAAAAAAAATC--GATGCAATCAATAGTA
GCTGAACAACCGGAACCGAATCCTCTGCAAACCTTTAAAGCCTCCTGTTTTTCTCGTCTCTCAGCTCCTCTTGTCCACTG
TCTTGGTCCCACAGTTAGTCGAACCCTAGGTCGCCTCCT-----------------------------------------
-------------GTTTCTCAATGTATGGGCA----ATTTTGATATGAAAATTTGTCACATTATCCATCTGCCTACATTG
CATGGAATGCACCTTTCGATTTTATACTGGTTGCTCCCTATTGTTGCAGTGTCGTTTTCTATTTTTCCCC----------
--TGTGGCCATGAGAAGTTACTACATCACAATATGGCTACA--CTCTGCAGAAATTGGGTGCTAACAGAAATAATAATAT
TAGTCACGATCAGTTTGTTTCATAAAGAAGATGCAACTGGTCTTTGTGTGGATGTATTTTTGCTGTTATTATCCAACTAA
ATTTGTCTTTTCTTGTCTCATGTTTTCCTCCAGGTAAGTCATCGCGAAGTATATTTCTGTCTTATAAGATGTATTGTCTT
GTTCAAATTTCTCTAAATCCCCCTCATTTTGTTGAAATGCAGAAAGTGAAGAAATTTTCGTTGGCTGAAGCAGGCTCCAC
CAGCACCACGGAAGCTCCAAAAAGCAAATAG-------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>chr3A_1_TraesCS3A01G149200
CAGTCGGTTGAATTTACCAACATCTCTACCCACAGCGAGCCTCTCCACAGTTTACAGAAACATCCTACCAACCAAACTAA
CCACTTCGACACTCGGTTCAAACCAATCAACATATAGCGAAGGCCACGCGCGGAACACAGTACAGATCAAACCACGCGAA
CAAGAGAGAGGGTCTGAGCAGGGGATAAGGAGAGGGGTTTGAGAGGCTCACGAGAAAGCACTCGAATTGGTCCTCGAGGT
CCTCGAGCGCGGCGCGGATAGCGTGGAGGCTCCTCGCCTCCTCGGCCACCGCATTCAGGTCGGCCGCCTCGTCGCCGTCC
GCGGGGACCCCCTTGATGTGGACGACGCCCGCGGGCTTGCCCCCGGCGCGGCGGCGCACGGCGCGCAGGAAATGGGCGCG
CGAGAGGGCGTGTATGGCGTCGCTGACCTTGTCGTGGAGGTCCCAGATGGTCTCCAGCACGGCCTCCGCCTCCTCGGGCT
CCATCCGAAACCCTAGCGCCGCCCCGGAAAATTCCAGACGGCGCTGGCCGCTTTGCTTGGGTTGTTGCGGGGTTTCCGAA
CTGCTTGGAGGGAGAGAGAGAGAGGGGCAGGTAAAATTTTGCTGAGCA---ATGATGATGGTGCTGACAGTGACTAAGAC
ATGGGCCATCGGCCGTCTGCAACATTCATTAAATGGCGGCCCTCTTAAATTCTGGGCCTGATTT-CCAAGCCCTCAGGGC
TCTGTCTTGGATCTGGGCTCTAGCGGGCCGGGC-TCGGAAAGGGAAAAACTCGAGAGCTTTCAGAATCCTTCCTTCTATG
CCATCAACGGCCGCCGGGGCGCCGCTGGTTTTCTTTCTTCTCGCCCAAGCCGCCGCCGCCGACACACCAAACCGGCAGCT
GCCTGGTCGCCGGGGCCGACCCTAGAATAAATTACGAAGCAGCGCCGCGGTCTCCAGGTAGTAGCAGCTCCCCCCAGAGC
CACACATCTCTCCTACGTGCTGTTGGTTGGTTGGATTGGATCGGCATGGAGAAGGAAGCGACGACGCCGCGGCCGGTGTG
CGCGCAGGAGGCGCTGGCGCTGCTCAACTGCGCCGCCGAGAACCCCTACGACCGCGACAAGTGCCTCGCCCTCCTCGACG
CGCTCCGGGAGTGCATCGCCCAAAAGGTAATTATAGGCCCAAGTGCATC---GCGTTTGGTGGACCGTTTGCTCATTCTT
GCCGATACAACTATGATTGATACAAACTATGATTTGTGATCCTGTACTGAAGGTCTTACATCTTAATAATTCCTTGGAAG
G--AAGATATTACCCACCACTGAGTAATCTTATCTTTGTGCCTAGCTGTTTTTAGGATGGACAATTG---TGGGACTCCA
TAGCTCCCAAACATGTGTATCTCACATCAT-TGCTTCCGTGTAATTTCGAGCAAAATGAGCACCATGTCACATAATTCCT
TGTCCAGTTGGAACAATCTTGCATGCTAAAGGGATACATACTTTTGTTGGATGGTAGAGATATCAACTTGCCGATCAAAG
CCTGGTTAAGTGTGAGAAGTTAGAAAGGCTTAGTTAAATCACTTGTTTGTACTCGGAGTTACAAGTCTGAAACTACTTGT
CTGTACCACTTAGCCAGTAA---CAATTTATTAGTGCTCGAGGTAATTCCCCTTTGAAA-AGCAAAGTGGAAATAC-CAA
AGTCTTTTAATAGTTTGTCTCCTTTGAGGATTCTGTGATATTCGGTACCGGTAGTTAAATGACGCCGTATTATTAAAAAG
CAACTTGTCTAAAATATGTTCGTCAGGTGGATATGTGTTAT-----CTAGCAGAATGACTACTCCAAAAAGTTATCAACA
ACAACAACAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTAGGCTAGAGCTGAAACTCATAAGATCTTTCTTTTGGG
TTTCATCTCCATAAGAGTGGCTGAGTTTTGACGTTGGCTCGCCAAGCCTATCACAACCCTCCTCCTTTACCCGGGCTTGG
GACTGGCTATGTCGAGAAAACATAGGCGGAGTTCCAAAAAGTTATCAAAACATGCAAAATAAATTGACAACACGAGATGC
ACCTATTATGTCATGACATTTTTAAC----------------ACATTGAGAGAAAAAAAATC--GATGCAATCAATAGTA
GCTGAACAACCGGAACCGAATCCTCTGCAAACCTTTAAAGCCTCCTGTTTTTCTCGTCTCTCAGCTCCTCTTGTCCACTG
TCTTGGTCCCACAGTTAGTCGAACCCTAGGTCGCCTCCT-----------------------------------------
-------------GTTTCTCAATGTATGGGCA----ATTTTGATATGAAAATTTGTCACATTATCCATCTGCCTACATTG
CATGGAATGCACCTTTCGATTTTATACTGGTTGCTCCCTATTGTTGCAGTGTCGTTTTCTATTTTTCCCC----------
--TGTGGCCATGAGAAGTTACTACATCACAATATGGCTACA--CTCTGCAGAAATTGGGTGCTAACAGAAATAATAATAT
TAGTCACGATCAGTTTGTTTCATAAAGAAGATGCAACTGGTCTTTGTGTGGATGTATTTTTGCTGTTATTATCCAACTAA
ATTTGTCTTTTCTTGTCTCATGTTTTCCTCCAGGTAAGTCATCGCGAAGTATATTTCTGTCTTATAAGATGTATTGTCTT
GTTCAAATTTCTCTAAATCCCCCTCATTTTGTTGAAATGCAGAAAGTGAAGAAATTTTCGTTGGCTGAAGCAGGCTCCAC
CAGCACCACGGAAGCTCCAAAAAGCAAATAGAAGCCCGCAATATTTCAGTGCCACTTACATAACATGTTCTAGGCCGGCC
ATACTGGTTTAGTGTTGGATCTGTCCTTTGTAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAAGGATGAATGTACTTTCGCTAGATTTCCTGCTGCCGTTCCTATCTAGTTTCATGATTGCAGGTGTCTGAAAAAGTCG
CATGAACAGTTGCCATCTCTTCACAGGTTTATGCTGGTAATTGTTCTGTGCCAAATCGTCGATAAAAGGGTAACTTGATG
ATTTCGAAGCATATTTTTGGCCTGTTTAGTATCCGATC------------------------------------------
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-----------------------------------CTGACATGTGCAATTTGATGCGTTCATGGAGATTTCTTGTACTGC
GTCGACGCTGATGTTTCTTGTCTTGTCTTACCTTTGTCTGTCTGGCAAGTATATATTCTTTCAGCTCCGGTCGTGAAGCA
AAGCCATGTTGTCCCTGGGCTTATGTGATCCGCACAAGTAGGAATATGAAAGAACATTGCTGGTTTTT
>chr3D_1
CAGTCGGTCGAATTTACCAACATTTCTACCCACAGCGAGCCTCTCCACAGTTTACAGAATCATCCTACCAACCAAACTAA
CCACCTCGACACTCGGTTCAAACCAAT-AACATATAGCGAAGGCGACGCGCGGAACACAGTACAGATCAAACCACGCGAA
CAAAAGTGAGGGTCTGAGCAGGGGATAAGGAGAGGGGTTTGAGAGGCTCACGAGAAAGCACTCGAATTGGTCCTCGAGGT
CCTCGAGCGCGGCGCGGATAGCGTGGAGGCTCCTCGCCTCCTCGGCCACCGCGTTCAGGTCGGCCGCCTCGTCGCCGTCC
GCGGGGACCCCCTTGATGTGGACGACGCCCGGGGCCTTGCCCCCGGCGCGGCGACGCACGGCGCGGAGGAAATGGGCGCG
CGAGAGGGCGTGTATGGCGTCGCTGACCTTGTCGTGGAGGTCCCAGATGGTCTCCAGCACGGCCTCCGCCTCCTCGGGCT
CCATCCGAAACCCTAGCGCCGCCCCGGAAAATTCCAGACGGCGCTGGCCGCTTTGCTTGGGTTG---------------A
CTGCTTGGAGGGAG-----GAGAGAGGTAGGTAAAATTTTGCTGAGCA---ATGATGATG---CTGACAGTGAC-AAGAC
ATGGGCCATCGGCCGTCTGCAACATTCATTAAACGGCGGCCCTCTTAAATTCTGGGCCTGATTTTCCAAGCCCTCAGGGC
TCTGTCTTGGATCTGGGCTCTAGCGGGTCGGGCTTCGGAAAGGGGAAAACTCGAGAGCTTTCCAAATCCTTCCTTGTATG
CCATCAACGGCCGCCGGGGCGCCGCCGGTTTTCTTTCTTCTCGCCCAAGCCGCCGCCG---ACACACCAAACCGGCAGCT
GCCTGGTCGCCGGGGCCGACCCTAGAATAAATTGCGAAGCAGCGCCACGGGCTGCAGGTAGTAGCAGCTCCCCTCGAGC-
--CACATCTCTCCCGCGTGC----GGTTGGTTGGATTGGATCGGCATGGAGAAGGAGGCGACGACGCCGCGGCCGGTGTG
CGCGCAGGAGGCGCTGGCGCTGCTCAACTGCGCCACCGAGAACCCCTACGACCGCGACAAGTGCCTCGCGCTCCTCGACG
TGCTCCGGGAGTGCATCGCCCAAAAGGTAATTATAGGCTCAAGCGCCTTA---CGTTTGGTGGGCCGTTTGCTCATTCTT
GCCGATACAGCTATGATTTC----------------TGATCCTGTACTGAAGGTCTTACATCTTAATAATTCCTTGGAAA
GAAAAGATATCACCCACCACTGAGTAATCTTATCTTTGTGCCTAGCTGTTTTTTGGATGGACAATTG---TGGGACTCCA
TAGCTCCCAATCATGTGTATCTCACATCATGTGCTTCCGTGTAATTTCGAGCAAAATGAGCACCATGTCACATAATTCCT
TGTCCAGTTGGAACAATCCTGCATGCTAAAGGAATACATACTTTTGTTGGATGGTAGAGATATCAACTTGCCGATCAAAG
CCTGGTTAAGTGTGAGAAGTTAGAAAGGCTTAGTTAAATCACTTGTTTGTACTCGGAGTTACAAGGCTGAAACCTTATTC
--GTACCACTTAGCTAGTACTAACTT----TTATTACCTGAGGTAATTCCCCTTTGAAATAGCAAAGAGGAAATATTCAA
AATCTTTTAATAGTTTCTCTCCTTTGAGGATTGTGTGATATTCGGTACTGCTAGTTAAGTGAGGCCGTATTGTTAGGGAG
TAACTTGTCTAGAATCTGGCTCTTAGGTGGATATGTGCTATCTAAGGCCATCTCCAACGCCAGGCGCTATGCCCTTTTCC
TCCACGAGCTGAGACGAAGCGCTGTCTCCAATCCAAGTATTTAGCGTCGGTGGTTAGCGCCTAGCGTTGGAACAGATGGC
ACTTAGTATTTTTTTTAAATTTTTGGTATTTTTTTTCTGTTTAAGCGCCTAGATAAGTGCCCCCATTGTATTT-------
--------------------------------------------------------------------------------
-------------------------ATCAGAAGTCG----------------------------------ATCAATAGTA
GCCGAACTCTAGGAACCGAATCCTCTGCAAACCATAAGC-CCTCCTGTTTTTCTTGCCTCTCAGCTCCTCTTGTCCACTG
TCTTGGTCCCACAGTTAGTCGAACCATAGGTCACCACTTTCTTTACAAAAAGAATTAGTTAGGTACCATTCACGGCGAAT
TTTGTCATTTTCAGTTTCTCAATGTATGGGCTT---ATTTTGCTATGAAAATTTGTCACATTACCCACCTGGCTAAATTG
TATGGAATGCACCTTTAGATTTTATACTAGTTGCTCCGTACTGTTGCAGTGTCCTTTTCAAGTTAAATTTCTGGTTATTT
TTTGTGATCATGAGAAGTTATTGCATTACAATGTAGCTGGACTCTGGAA--AAATTGGGTGCTAACAGAAACAATCATAT
TAGTCATTATCTGTTTGTTTCATAAAGAAGCTGCAGCTGATCTTTGTGTGGATGTATTTTCGCTGTTACTATCCAACTAA
ATTTGTCTTTTCTTGTCTCATGTTTTCCTCCAGGCAAGTCATCGCGAAGTATATTTCTGTCTTAGAAGATGTATTGTCTT
GTTCAAATTTCTCTAAATCCCCCTCATTTTGTTGAAATGCAGAAAGTGAAGAAATTTTCGTTGGCTGAAGCAGGCTCCAC
CAGCACCACGGAAGCTCCAAAAAACAAATAGAAGCCCGCAATATTTCAGTGCCACTTACATAACATGTTCTAGGCCAGTC
ATACTGGTTTAGTGTTGGATCTGTCGTTTGTAGTTCATTTCTGATTTAGATCCCCCCCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNN-----GTCGAGTTGTCAACTGTTGATTATATGTAATTTTTACGCAGTTTGAGCAGAC---------
--AAGGATGAATGTACTTTCGCTAGATTTGCTGCTGCCGTTCCTACCCAGTTTCATGATTACAGGTGTCTGAAATAGATG
CATGAACAGGTGCCATCTCTTCACAGATTTAAGCTTGTAATTGTTCTGTGCCAAATCGTCGATGAAAGGGGAACTTGATG
ATTTCGAAGCTAATTTTTGGCCTGTTTAGTATCTGATC------------------------------------------
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-----------------------------------CTGACATGTGCAATTTGATGCGTTCATGGAGATGTCTTGTACTGC
GCCGATGCTGATGTTTCTTGCCTTGTCTTACCTTTGTCTCTCTGGCAAGTATATATTCTTTCAGCTCCGGTCGTGAAGCA
AAGCCATGTTGTCCCTGGGCTTATGTGATCCACACAGGTAGGAGTATGGAAGAACGTTG---------
>chr3B_3
--GTCGGTTGAATTTACCAACATTTCTACCCACAGCCAGCCTCTCCACAGTTTACAGAAACATCCTACCAACCAAACTAA
CCACTTCGGCACTCGGTTCAAACCAATCAACATATAGCGAAGGCGACGCGCGGAACACAGTACAGATCAAACCACGCGAA
CAAGAGTGAGGGTCTGAGCAGGGGATAAGGAGAGGGGTTTGAGAGGCTCACGAGAAAGCACTCGAATTGGTCCTCGAGGT
CCTCGAGCGCGGCGCGGATAGCGTGGAGGCTCCTGGCCTCCTCGGCCACCGCATTCAGGTCGGCCGCCTCGTCGCCGTCC
GCGGGGACCCCCTTGATGTGGACGACGCCCGCGGGCTTGCCCCCGGCGCGGCGGCGCACGGTGCGCAGGAAATGGGCGCG
CGAGAGGGCGTGTATGGCGTCGCTGACCTTGTCGTGGAGGTCCCAGATGGTCTCCAGCACGGCCTCCGCCTCCTCGGGCT
CCATCCGAAACCCTAGCGCCGCCCCGGAAAATTCCAGACGGCGCTGGCCGCTTTGCTTGGGTTGTTGCGGGGTTTCCGAA
CTGCTTGGAGGGAG-----GAGAGAGGTAGGTAGAATTTTGCTGAGCAATGATGATGATG---CTGACAGTGAC-AAGAC
ATGGGCCATCGGTCGTCTGCAACATTCATAA-----CGGGCCTCTTAAATTCTGGGCCTCATTTTCTA------------
-----CTTGGATCTGGGCTCTAGCGGGTCGGGCTTCGGAAAGGGGAAAACTCGAGAGCTTTCCAAATCCTTCCTTCTATG
CCATCAGCGGCCGCCGGAGCGCCGCTGGTTTTCTTTCTTCTCGCCCAAGCCGCCGCCG---ACACACCAAACCGGCAGCT
GCTTGGTCGCCGGGGCCGACCCTAGAATAAATTACGAAGCAGCGCCACGGTCTCCAGGTAGTAGCAGCTCCCCTCGAGC-
--CACATCTCTCCCGCGTGCTGTTGGTTCGGTGGATTGGATCGGCATGGAGAAGGAAGCGACGACGCCGCGGCCGGTGTG
CGCGCAGGAGGCGCTCGCGCTGCTCAACTGCGCCGCCGAGAACCCCTACGACCGCGACAAGTGCCTCGCCCTCCTCGACG
CGCTCCGGGAGTGCATCGCCCAAAAGGTAATTATAGGCTCAAGCGCCGCCTTGCGTTTGGTGGACCCTTTGCTCATTCTT
GCCGATACAACTA----------------TGATTTGTGATCCTGTACTGAAGGTCTTACATCTTAATAATTCCTTGGAAG
G--AAGATATCACCCACCACTGAGTAATCTTATCTTTGTGCCTACCTGTTTTCTGGATGGACAATTGTGGTGGGACTCCA
TAGCTCTCAAACATGTGTATCTCACATCATGTGCTTCCGTGTAATTTCCAGCAAAATGAGCACCATGTCACATGATTCCT
TGTCCAGTTGGAACAATCCTGCATGCTAAAGGAATACATACTTTTGTTGGTTGGCAGAGATATCAACTTGCCGATCAAAG
CCTGGTTAAGTGTGAGAAGTTAGAAACGCTTAGTTAAATCACTTGTTTGTACTCGGAGTTACAAGGCTGAAACTACTTGT
CTGTACCACTTAGCTAGTAGTACCAATTTATTAGTACCCGAGGTAATTCCCCTTTGAAA-ATCAAAGTGGAAATAC-CAA
AGTCTTTTAATAGTTTGTCTCCTTTGAGGATTGTGTGATATTCGGTACCGCTAGTTAAATGACGCCATATTATTGGAGAG
CAACTTGTCTAAAATATGTTTGTCAGGTGGATATGTGTTATCTAAACTAGCAGAATGACTACTCCAAAAAGTTATG----
--AACAACAACAACAAAGCCTTTAGTCCCGAACAAGTTGGGGTAGGCTAGAGCCGAAACTCATAAC-TCTTTCTTTTGGG
TTTCATCTCCATAAGAGTGGCTGAGTTTTGACGTTGGCTCGCCAAGCCTATCACAACCCTCCTCCTTTACCCGGGCTTGG
GACTGGCTATGTCGAGAAAACATAGGCGGAGTTCCAAAAAGTTATCAAAACATGCAAAATAAATTGACAACACAAGATGC
ACCTATTATGTCATGACATTTTTAAATCAGAAGTCGATCTATACATTGAGAGAAAAAAAACAATGATGCAATCAATGGTA
GCTGAACAACCGGAACCGAATCCTCTGCAAACCTTTAACGCCTCCTGTTTTTCTCGCCTCTCAGCTCCTCTTGTCCACTT
TCTTGGTCCCACAGTTAGTCTAACCCTAGGTCGCCATTCTCTTT---AAAAAAACTAGGTAGGTGTCATTCACAACAACA
AAAATCAGTTTCAGTTTCTCAATGTATATATGACCGATTTTGATATGAAAA-TTGTCACATTATCCATCTGCCTACATTG
TATGGAATGCACCTTTCGATTTTCC-----------------------------------------CCCC----------
--TGTGGCCATGAGAAGTTACTACATCACAATGTAGCTAGACTCTCTGCAGAAATTGGGTGCTAACAGAAATAATTATAT
TAGTCACGATCAGTTTGTTTCATAAAGAAGATGCAACTGGTCTTTGTGTGGATGTATTTTTGCTGTTATTATCCAACTAA
ATTTGTCTTTTCCTGTCTCATGTTCTCCTCCAGGCAAGTCATTGCGAAGTATATTTCTGTCTTATAAGATGTATTGTCTT
GTTCAAATTTCTCTAAATCCCCCTCATTTTGTTGAAATGCAGAAAGTGAAGAAATTTTCGTTGGCTGAAGCAGGCTCCAC
CAGCACCACGGAAGCTCCAAAAAGCAAATAGAAGCCCGCAATATTTCAGTGCCACTTACATAACATGTTCTAGGCCAGTC
ATACTGGTTTGGTTTAGAGTTGGATTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACA
ACAAAATCCAATATGTTATGTCGAGTTGTCGACTGGAGATTATATGTAATTTTTACGCAGTTTGAGCAGAC---------
--AAGGATGAATGTACTTTCGCTAGATTTGCTGCTGCCGTTCCTATCCAGTTTCATGATCGCAGGTGTCTGAAATAGTCG
CATGAACAGTTGCCACCTCTTCACAGATTTATGTTTGTAGTTGTTCTCTGCCGAATCGTCGATAGAAGGGGAACTTGATG
GTTTCGAAGGTAATTTTTGTCCTGTTTAGCGAAGTTAGTAGTACAAAATTGAGTCATTTATTTGTCCTGTTTATGTGGAT
CTCTATGGCTGCTTCTCCCCTCGTGCTTCGGGCTTCTCACCCCATGTTGGGTCCAGTTCGACGCCCCAAGTGTTACCGGA
CTTCGAGGGGGTGGCCTCCGTCGAGGTAGTGTCTCCGGTGTTGCAGATCATGCTCGAGCTGCAGATGTTGAGTGGGGAAC
TTGTTTCACCTTTGTCGATGGAGCAACTCAAGTTGGACTCTCCCCAGGCTTCGGAGGTGGACTTGGTGTCCTCACCACCC
CCCATGGAGCCTTGTCAGGCGTCAAACAGCCTACCTCTCGACGTCATGGAGAGCGGCGTTTTAGATGCTGTCGTCGTTCC
CTCGTCTGTGACCATCGGGCAGGTGATGCCTGTGAGTGGCATGACCACGGAGCCACTTGTGTTGGCACCTACCCCAAATT
CAAATGCTCTCTTCGCGAAGGAACTTTGTGACTTGCCAGTGTTGAAGTTGCTAGACCTGGTTTAGGTAGGTCGATTGCTT
GCCTCCTAAGAGAGACGCCAATAAGGGACAAACAAAAGAAGGTGGGCAATCGCAAGAGTGGCGCCAAAGACAAAACGTCT
TTGGCTGCTTGATTGGGTTGTCATTTCTGGTTGGGAGGTGCCTCTGGGTTTGTGGATGTTGTGTATTCGGCGAGTGTGAC
AGACCGTTTGTGCGGTTGTGGGGTTTCATGTCGTGTGAGTAGTTCGTTTGTGCTCAGTTTGTATTGGTTTTCGCCCGGTT
TCCCGTTAATTAACTGGGCAATTCTCTTCTTCTTAATTAATCGATGAGGTAAAACTTTTGCCTCCGTTTTGAAAATTTTT
TTAAGACGGAGGGAGTATCTGATCGCAAGGGCTGACTGGCATGTGCAATTTGGTGCGTTCATGGAGATAGCTTGGACTGC
GTCGATGCTGATGTTTCTTGTCTTGGCTTACCTTTGTCTGTCTGGCAAGTATATTCTTTG--AGCTCCGGCCGTGGAGCA
AAGCCATGTTGTCCCTGGGCTTTATGTGATT-CACAGGTAGGAATATGAAAGAAC-------------
>SNPs
-----------------------S--------------------------------------------------------
--------------------------------------------S-----------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------SSSSS-----S--S--------------------------------SSS-----------S-----
---------------------------------S----------------------------------------------
---------------------------S----------------S-----------------SS----------------
----------------------------------------------------------SSS-------------------
----------------------------------------------S--------------------------S-SSSSS
SS-----------SS-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S----S--S---------------------------------
------------------SSSSSSSSSSS---------------------------------------------------
----------S------------------------------------------S--------------------------
--------------------------------------------------------------------------------
------------------S-------------S-----------------------------------------------
-----------------------------------------------------------------S--------------
--------------S----S---------------S-S------------------------------------------
--------------------------------S-----------------S------------------------S-S--
--------------------S------------------------------------------------------SSS-S
S-----------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-------------------------S----------------------------------SS------------------
--------------------------------------S-----------------S-----------------------
-----------------------------------S-S------------------------------------------
-------------------------------S------------------------------------------------
S---------------------------S--------S--S------------S-----S-S--SS--------------
--------------------------------S-S----S-----------------------------------S----
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S-S-
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS---------------------------S-----------------S--------------------------S-----
--------------------------S--------S----------------------------------S---------
----------SS---------------------S----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------S-----------
-----S--------------------------------------------------------------------------
-------------------------------S----S------------------S---SSSSSSSSS
>forward_576
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------CGAA
CTGCTTGGAGGGAGAG----------------------------------------------------------------
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>reverse_2462
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-------------------------------------------------------------TTTTTCCCCTGTGGCCATG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>forward_579
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-------------------------------------------------------------------------------A
CTGCTTGGAGGGAGAGAGA-------------------------------------------------------------
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>reverse_2520
--------------------------------------------------------------------------------
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---------------------------------------CACTCTGCAGAAATTGGGTGC--------------------
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>forward_927
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------TAAATTACGAAGCAGCGCCG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_2675
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TAAGTCATCGCGAAGTATATTTCTGT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>forward_954
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------AGGTAGTAGCAGCTCCCCC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_3470
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CCTGCTGCCGTTCCTATCTAG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
