>input_sequence_44741
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-----------------------------------------------------------------ATGGTCGTCCTCGCC
CCCGCCTCCTCCTTCCACCACCAGAGGGCCGCTGCTGCTGCCGCCGCG---GCGGACGCCGCCGACCAAGGGTTCGCCCT
CCTCTCCGCGGGGCAGTGCGGGCTCGCCGACCCTGGCGCTCCCAAGTCCGGCAGCGCCATCCAATTCTGGCAGTCGCACT
CGCAGCCCCACACGACGCCGCCCGCCGCTGCCCCCGCCGACAAGAAGCAGGTCGTCTCCGCGGTGGACTACGGCGGCGTC
TCCTCCGGATCCGGCGGCTCCACCACGTGCAACGACTGCGGCAACCAGGCGAAGAAAGACTGCCCCCACCAGCGCTGCCG
GACGTGCTGCAAGAGCCGCGGCTTCGACTGCACGACGCACGTCAGGAGCACCTGGATCCCGGCCGCCCGGCGCCGCGAGA
AGCACCCGCTCGGCGGCGACCTTTCCCCTCCCGCCGCTCCTGCCACGGCGGCCACCAAGAAACCGCGGTTCCACTCCTCC
CAGACCACCACCACCACCACCACCTCTCGCACCTCCACCTCCAACGGCACCTCCTCGAGCCAACAAGGTGATCGACCAGC
ACAGACGCAC--------ATCCCAAGTCTCAGCAGTCAGCACACATAATTCAAGAAACTTGCACACTAATCACATCTTCT
AT-CCCATCCTCTGCAGACGCGCCGTTCAGGGACAGCCTGCCGCGGCACGTGCGCGCGCCGGCGGTGTTCCGGTGCGTGC
GGGTGACCTCCGTCGACGACGGCGCGGACGAGTTCGCGTACCAGGCGGCGGTGAGCATCAACGGCCACATGTTCAGGGGG
TTTCTCTACGACCAGGGCGCCGACAACGGCCGCACCAGCAACGACGAGCCCAGCCACGCGCACGCGGCCGCCGTGCGTAG
CATCTCCGACCTCCACCTCGGCAACGCCTCCACGGTGCCGCCGGACATGTACAACACCGTCAGCGGGGCGCTCATTCTCG
GCGGGATGGGCTATGGTAACACCATGAACTGAAAACTAT------TAGTGC---TAGCTAGTAAGCCTGGTGCAATAATG
GTAGACATCCATCTTGTTACTACATGTCACCTCATTTCTTTCATCTCAA--TCACCAGTAGTGGTACTACCCTGTCTTCC
ATTTTGCTGCTGCATGCTGTGTGCCGGTGCCACAGCTAACTTCCAAGTCTTTTGT---TACTAGAGGTTGGAAAGAAAAT
GAAAGGAAAACCAATCAGTATTTCCAAGGTAAACTG-------------------------------------------G
CTGTTGTGTTACCATTTTTTT--ACTGAACATGTTTGCATATGTTGGGAACTGCAAATTATATACAGTTAAAATCACCAT
GGTCTGTGGGTC----------------------------------------CTTCTTTAGAGTAAT-TTTTTTAGACAA
AACCTTATTTGTAGTAATCACTTGACGCCATGGAGAGGTTGATGGTAGC---ACTATTGTTAA-TTTGGCAGCTGAAAAG
TTTGACTCTTTGATGCTCTTCCTAGTCCCCACGCTATCGACCACTTCACTTCATCCTCTTGCGTGCTATGGCTTCCGAAT
T---GCCAGTCTTGTTTACCTTGTTCAGCTAG---TAGCACGTATACT---CTATCGCTTCCCCAAATTTACGGGGTTGG
TAGGA-TAGCAAGACCATGGGTTGGATTCTTACTTGCTTTGTATGTGCTGTTAAGCATCTTATCCGTGCATTGGAACTTG
TAGCGGGAAAAAGAGAGCCAATGTGCAATGCATGTGGTGATAAGAATTCTCTTGCCCTCTTAAAATAA------------
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>chr1B_1_TraesCS1B01G253200
TAACGCGGGGGCAGAGCTGCAAACGGCGGCAGCGGCAG------AGCAGGAGGGAGAAG--AGAA----GGGAGCCGGGC
GGGCGCGTCAGTGAAAGCTGCCAG------GCTGCGCTGCGTGCCCGGTGC----GGTGCCCCCACAAGAAGTCTCGATC
CCCCACTGGGCGCAG------GCGCAGCGAGCGAAAGATGAGATCCCGTGGCCGATCGCAGCCGGTCGCGCAGAGGAATT
TTTCAGCCGCAGACCCCACCCGCAGCCACTTCTTCAGACCTCACACACGCTGAACGCTGAAGCAGCACCCGGCCGGCCCC
TCTCTCCTTCTCT--------CCTATCTTCACGAGCACACAGCATACACACG----CTCTCTCCCTCTCAC-----GTTG
TCCTGTGGAAAGTAGAGGGATAAAGAACACAAGCGGCTAGCCCCTGTGTCCTGTAGGCCGTAGGCG--TACACACACA--
--GATACTCCAAAAGGGAGGAG-----AGAGAAGGCTACCTA----GAAAGCTATGCTAACCTAGCTAGGGTAGGCTGTA
GAGACTAGAGAG-----------------AGGGTAGCTAGGTGGTAGTAGGGTAGAGTCTTTTGTGTTTTCTTTTCTTTA
CTCTTGGATGCCCCTTCCTTCGCTGAGAAGAGAGATTCTTCTTTAAAGTGGATGGAGAGGAGGGGTT-----TCCATCCG
TAGGCTCACTCAACTCAGCTGCTAGCCGCTACTCCTCAGA----------GGAGCATCTTCGTCTGCTCTTGCGCCTTTT
CTGCTCGCTCGCTGCCTGCCTGCCT----TTGGAGCTAAGCTTAGCCTAGGTAGGCGTAGCGGCT--AGCT----AGCCA
GGGAGGGGAAGCTACTGCCCCCAGCCAGCAAGCGTGGCGTCGTCGGGGAGGCGCTTCCCATCGGTCTCCGCGGCCTACGC
GGACTGGATCGCGTCGGCCGGCGGCGACGACCTCTCGCTCGGCTTCAATGCCGCTGGCGCGTCCGCCAACGGCCTTTGGG
GACCAGCCTCGCGCCAGTCCGCCGCGCTCAACTACGGGATAA---CGGCTGCTGGTGATGTCGGCATGGTCGTCCTCGCC
CCCGCCTCCTCCTTCCACCACCAGAGGGCCGCTGCTGCTGCCGCCGCG---GCGGACGCCGCCGACCAAGGGTTCGCCCT
CCTCTCCGCGGGGCAGTGCGGGCTCGCCGACCCTGGCGCTCCCAAGTCCGGCAGCGCCATCCAATTCTGGCAGTCGCACT
CGCAGCCCCACACGACGCCGCCCGCCGCTGCCCCCGCCGACAAGAAGCAGGTCGTCTCCGCGGTGGACTACGGCGGCGTC
TCCTCCGGATCCGGCGGCTCCACCACGTGCAACGACTGCGGCAACCAGGCGAAGAAAGACTGCCCCCACCAGCGCTGCCG
GACGTGCTGCAAGAGCCGCGGCTTCGACTGCACGACGCACGTCAGGAGCACCTGGATCCCGGCCGCCCGGCGCCGCGAGA
AGCACCCGCTCGGCGGCGACCTTTCCCCTCCCGCCGCTCCTGCCACGGCGGCCACCAAGAAACCGCGGTTCCACTCCTCC
CAGACCACCACCACCACCACCACCTCTCGCACCTCCACCTCCAACGGCACCTCCTCGAGCCAACAAGGTGATCGACCAGC
ACAGACGCAC--------ATCCCAAGTCTCAGCAGTCAGCACACATAATTCAAGAAACTTGCACACTAATCACATCTTCT
AT-CCCATCCTCTGCAGACGCGCCGTTCAGGGACAGCCTGCCGCGGCACGTGCGCGCGCCGGCGGTGTTCCGGTGCGTGC
GGGTGACCTCCGTCGACGACGGCGCGGACGAGTTCGCGTACCAGGCGGCGGTGAGCATCAACGGCCACATGTTCAGGGGG
TTTCTCTACGACCAGGGCGCCGACAACGGCCGCACCAGCAACGACGAGCCCAGCCACGCGCACGCGGCCGCCGTGCGTAG
CATCTCCGACCTCCACCTCGGCAACGCCTCCACGGTGCCGCCGGACATGTACAACACCGTCAGCGGGGCGCTCATTCTCG
GCGGGATGGGCTATGGTAACACCATGAACTGAAAACTAT------TAGTGC---TAGCTAGTAAGCCTGGTGCAATAATG
GTAGACATCCATCTTGTTACTACATGTCACCTCATTTCTTTCATCTCAA--TCACCAGTAGTGGTACTACCCTGTCTTCC
ATTTTGCTGCTGCATGCTGTGTGCCGGTGCCACAGCTAACTTCCAAGTCTTTTGT---TACTAGAGGTTGGAAAGAAAAT
GAAAGGAAAACCAATCAGTATTTCCAAGGTAAACTG-------------------------------------------G
CTGTTGTGTTACCATTTTTTT--ACTGAACATGTTTGCATATGTTGGGAACTGCAAATTATATACAGTTAAAATCACCAT
GGTCTGTGGGTC----------------------------------------CTTCTTTAGAGTAAT-TTTTTTAGACAA
AACCTTATTTGTAGTAATCACTTGACGCCATGGAGAGGTTGATGGTAGC---ACTATTGTTAA-TTTGGCAGCTGAAAAG
TTTGACTCTTTGATGCTCTTCCTAGTCCCCACGCTATCGACCACTTCACTTCATCCTCTTGCGTGCTATGGCTTCCGAAT
T---GCCAGTCTTGTTTACCTTGTTCAGCTAG---TAGCACGTATACT---CTATCGCTTCCCCAAATTTACGGGGTTGG
TAGGA-TAGCAAGACCATGGGTTGGATTCTTACTTGCTTTGTATGTGCTGTTAAGCATCTTATCCGTGCATTGGAACTTG
TAGCGGGAAAAAGAGAGCCAATGTGCAATGCATGTGGTGATAAGAATTCTCTTGCCCTCTTAAAATAA--TATGCAGCTG
A-----TAGTAAATTACTTGGGTCACGATCGTGGAAGCCAATAATGGTACAGTGCTCCATACATTAGCCTTGGCCTGTTT
GCTAGTCCTAGTAGCTGCTTGTTAACAATATGATGAAGGGACATCTTCTCTTAAACTTTTGTTGCGAGCCCCCATATTTA
TTCCCCCTGCTGCCGGATCCCAAATCCAGAATGAAAACATGTACCCCTTTTTTCC--------AGGTGTTTTTCCGAGCT
AACATATTTTGCAAAAATAAAACGTCTTATATTGTGGGACGGATGAAGT-------------------------------
------------------------------------ACTAAGGAGTGGCCATATCTCAATCAACACAGAACTAAATCTGT
CTCCGCAAGTACACTTATAGAGATATATTTCCGACCAAGATTTCGCATCCATTCCATACTTGTAA-AATCTCTAATTTTG
ATCAGATTGTTCTTAGCTGCGAGAAATAAAAAGATCATATTTTTATG----------------------------AGATT
TGTTAGTTTCAGTCTGTTTTTTT--TTTCTTCATTCGTAAGCAGGCCAAGTTATCACACAATAAAGTCATCTTGTGCTGT
GGATCTGTTCTACAACTTC----------------------------AGTTTTAGGAGTGCAAATTACAAATGATTTCTG
AAAATGG--TACACCTAATTTTTCTTCCATGGGGAACCAACGATGTTTAGATCTGTATCGTAAGTTTATGGGTGTACCGA
AGCACTGCTCTTTGTAGATTTTAAGCACTTCTAGAATGTCTACTATGTATTGAAAAATATATCAGTTA------------
-------------------------------AA---ATAGATAAAGAACCACAGGGTTAATTTGGTGGCTATTTCCACCT
TGTTGTGTCATGTCAAATGTGAGTTTGGTCGATTTGCTTGAGCCACCGCAACTTGAGGACGAAATTTATGCTGCGGTAGC
TGGTCGAAGGGGTTGGGTAAGTCATCTTGTCATCAGCAAAGCCGCTGTTATCTCATGTGTTGTTTCTATGGGGATCTTTT
GGCCCATGCTGCCGTGCCTAACTTTCGGGAGCACGGCTACTGTGCAGGGCGCTTGTT
>chr1D_1
TAACGCGGGGGCAGAGCTGCAAACGGCGGCAGCGGCAG------AGCAGGAGGGGAGAAGAAGAA----GGGAGCCGGGC
GGGCGCGTCAGTGAAAGCTGCCAG------GCCGCGCTGCGTGCCCGGTGCATGCGGCGCCCCCACAAGAAGTCTCGATC
CCCCACTGGGCGCAG------GCGCAGCGAGCGAAAGATGAGATCCCGTGGCCGATCACAGCCGG-CGCGCAGAGGAATT
TTTCAGCCGCAGACCCCACCCGCAGCCACTTCTTCACGCTGAAGCAGC-------------GCAGCACCCGGCCGGCCCC
TCTCTCCTTCTCTGCTTCTCTCCTATCATCACCAGCACACAGTATACACACG----CTCTCTCCCTCTCACACTCCGTTG
TCCCGCGGAAAGTAGAGGGATAAAGAACACAAGCGGCTAGCCCCTGTGTCCTGTAGACCGTAGGTGTATACACACACA--
--GATACTCCAAAAGGGAGGAGGAGAGAGAGAAGGCTACCTA----GCAAGCTATGCTAACCTAG----GGTAGGCTCTA
GAGACTAGAGAGAG----GCTGGCTAGCTAGGGTAGCTAGGTGGTAGTAGGGTAGAGCCTTTTGTGTTTTCTTTTCTTTA
CTCTTGGATGCCCCTTCCTTCGCTGGGAAGAGAGATTCTTCTTTAAAGTGGA----GAGGAGGGGTT-----TCCGGCCG
TAGGCTCACTCAACTCAGCTGCTAGCCGCTACTCCTCAGA----------GGAGCATCTTCGTCTGCTCTTGCGCCTTTT
CCGCTCGCTCGCTGCCTGCCTGCCTGCCTTTGGAGCTAAGCTTAGCCTAGGTAGGCGTAGCGGCT--AGCTAGCCAGCCA
GGGAGGGGAAGCTACTGCCCCC-ACCAGCAAGCGTGGCGTCGTCGGGGAGGCGCTTCCCATCGGTCTCCGCGGCCTACGC
GGACTGGATCGCGTCGGCCGGCGGCGACGACCTCTCGCTCGGCTTCAATGCCGCTGGCGCGTCCGCCGCCGGCCTCTGGG
CCCCCGCCTCGCGCCAGTCCGCCGCGCTCAACTACGGGATAGCGGCGGCTGCAGGTGATGTCGGCATGGTCGTCCTCGCC
CCCGCCTCCTCCTTCCACCACCAGAGGGCCGCTGCTGCTGCCGCGGCG---GCCGACGGCGCCGACCAAGGGTTCGCGCT
CCTCTCCGCGGGCCAGTGCGGGCTCGCCGACCCTGGCGCTCCCAAGTCCGGCAGCGCCATCCAGTTCTGGCAGTCGCACT
CGCAGCCCCCCACGACGCCGCCCGCAGCTGCCCCCGCCGACAAGAAGCAGGTCATCTCCGCGGTGGACTACGGCGGCGTC
TCCTCCGGATCCGGCGGCTCCACCACGTGCAGCGACTGCGGCAACCAGGCGAAGAAGGACTGCCCCCACCAGCGATGCCG
GACGTGCTGCAAGAGCCGCGGCTTCGACTGCACGACGCACGTCAGGAGCACCTGGATCCCGGCCGCCCGGCGCCGCGAGA
AGCACCCGCTCGGCGGCGACCTTTCCCCTCCCGCCGCTCCTGCCACGGCGGCCACCAAGAAACCGCGGTTCCACTCCTCC
CAGACCACCACCACCACCACCCCCTCTCGCACCTCCACCTCCAACGGCACCTCCTCGAGCCAACAAGGTGATCGACCAGC
ACAGACGCACGCACGCACATCCCAAGTCTAAGCA-------CCCACAATTCAAGAAACTTGGACACTGATCACATCTTCT
ACCCCCATCCTCTGCAGACGCGCCGTTCAGGGACAGCCTGCCGCGGCACGTGCGCGCGCCGGCGGTGTTCCGGTGCGTGC
GGGTGACCTCCGTCGACGACGGCGCGGACGAGTTCGCGTACCAGGCGGCGGTGAGCATCAACGGCCACATGTTCCGGGGG
TTTCTCTACGACCAGGGCGCCGACAACGGCCGCGCCAGCAACGACGAGCCCAGCCACGCGCACGCGGCCGCCGTGCGTAG
CATCTCCGACCTCCACCTCGGCAACGCCTCCGCCGTGCCGCCGGACATGTACAACACCGTCAGCGGGGCGCTCATTCTCG
GCGGGATGGGCTATGGTAACACCATGAACTGAAAACTAT------TAGTGCTAGTAGCTAGTAAGCCTGGTGCAATAATT
GTAGACATCCATCTTGTTACTACATGTCACCTCATTTCTTTCATCTC-A--TCACCAGTAGTGGTACTACCCTGTCTTCC
ATTTTGCTGCTGCATGCTGTGTGCCTGTGCCACAGCTAACTTCCA-GTCTTTTGT---TAGTAGAAGTTGGAAAGAAAAT
GAAAAGAAAACCAGTCAGTATTTCCAAGGTAAACTTGCTGTACAACATACTACCATATGGCTTTTCTTATGTGGCTGATG
CTGTTGTGTTACCATTTTTTT--AAT-------TTTGCATATGTTGGGAACTGCAAATCATATACACTTAAAATCACCAT
GTTCTGCGGGTC----------------------------------------CTTCTTTGGAGTAATTCTTTTTAGACAA
AACCTCATTTGTAGTAATCACTTGACGCCATGGAGAGGTTGATGGTAGT---ACTATTGTTAAATTTGGCAGCTGAAAAG
TTTGACTCTTTGATGCTCTTCCTAATCCCCACGCTATCGACCACTTCACTTCATCCTCTTGCGTGCTATGGCTTCCGAAT
T---GCCAGTCTTGTTTACCTTGTTCAGCTAGTACTAGCACGTATACTCT--TATCTCTTTCCCAAATTTACGGGGTTGG
TAGGAATAGAAAGACCATGGGTTGGATTCTTACTTGCTTTGTATGTGCTGTTAAGCATCTTATCCGTGCATTGGAACTTG
TAGCGGGAAAAAGAGAGCCAATGTGCAATGCATGTGGTGATAAGAATTCTCTTGCCCTCTTAAAATAA--TATGCAGCTG
A-----TAGTAAATTACTTGGGTCACGATCATGGAAGCCAATAATGGTACAGTGCTCCATGCATTAGCCTTGGCCTGTTT
GCTAGTCCTAGTAGCTGCTTGTTAACAATATGATGAAGGGACATCTTCTCTTAAACTTTTGTTGCGAGCCCCCATATTTA
TTCCCCCTGCTGCCGGATCCCAAATCCAGAATATACATG---ACCCCTTTGTTCCGTAATATAAGATGTTTT-CCAAGCT
AACATAATTTCCGATCAAGATTTTTCATATATATTCTGTCTGAGCAAGTACACATAGAGATATATTTCCAAGCTAACAAA
GGGGTACACATAGAGATATATTCCCCCTGCTTGAGGACTAAGGAGTGGCCATATCTCAATCAACACAGAACTAAATCTGT
CTGAGCAAGTACAC--ATAGAGATATATTTCCGATCAAGATTTTTCATCCATTCCATACTTGTAAGAATCTCTAATTTTG
ATCAGATTATTCTTAGCAGCGAGAAATAACAAGACCATATTTTTATG----------------------------ATATT
TGTTAGTTTCAGTCTGA-TTTTT--TTTCTTCATTCCTAAGCAGGCCAAGTTATTACACAACAAAGTCATCTTGTGCTGC
GGATCTATTGACTGTAAAACTTGCATAAAGAATTTTTCTGTAACTTAAGTTTTAGGAGTGCAAATTACAAATGATTTCTG
AAAATGCACTATACCTAATTTTTCTTGCATGAGAAACCAACGATGTTTAGATCTGTATCGTAAGTTTGT-----------
---------------AGATTTAAAGTACTTCTAGAATGTCTACTATGTATTGAAAAATATATCAGTTCGGTTCGTCTAAG
ATTGGCAGGTGATCATTGGATCAAAGGAAATAA---ATAGATAAAGAACCAGAGGGTTAATTTGGTGGCTATTTCCACCT
TGTTGTGTCATGTCAAATGTGAGTTTGGTCGATTTGCTTGAGTCACCGCAACTTGAGGACGAAATTTATGCTGTGGTAGC
TGGTCGAAGGGGTTGGGTAAGCCATCTTGTCATCAGCAAAGACGCTGTTATCTCATGTGTTGTTTCTATGGGGATCTTTT
GGCCCATGCTGCCGTGCCTAACTTTCGGGAGCACGGCTACTGTGCAGGGCGCTTGTT
>chr1A_1
TAACGCGGGGGCAGAGCTGCAAACGGCGGCAGCGGCAGCGGCAGAGCAGGAGGGAGAAG--AAGAGAAGGGGAGCCGGGC
GGGCGCGTCAGTGAAAGCTGCCAGCAGGCTGCCGCGCTGCGTGCCCGGTGC----GGCGCCCCCACAAGAAGTCTCGATC
CCCCACTGGGCGCAGCCGCAGGCGCAGCGAGCGAAAGATGAGATCCCGTGGTCGATCAGAG--------------GAATT
TTTCAGCCGCAGACCCCACCCGCAGCCACTTCTTCAGACCTCACACACGCTGAA-------GCAGCACCCGCCCGGCCCC
TCCCTC-----------CTCTCCTATCTTCACCAGCACACAGCATACACATGCTCCCTCTCTCTCACACACACTCCTTTG
TCCTGAGG-AAGTAGAGTGATAAAGAACACAA-------------GTGTCCTGTAGGCCGTAGGTGTATACACACACAGA
CAGATACTCCAAAAGGGAGGAGGAGAGAGAGGAGGCTACCTACGTAGCAAGCTATGCTAACCTAG----GGTAGGCTCTA
GAGACTAGAGAGAGGGTAGCTAGCTAGCTAGGGTAGCTAGGTGGTAGTAGGGTAGAGTCTTTTGCGTTTTCTTTTCTTTA
CTCTTGGATGCCCCTTCCTTCGCTGGGAAGAGAGATTCTTCTTTAAAGTGGATGGAGAGGAGGGGTTTCCGGTCCGTCCG
TAGGCTCACTCAGCTCAGCCGCTAGCCGCTACGCTACCTCACTCTCAGAGGGAGCATCTTCGTCTGCTCTTGCGCCTTTT
CCGCTCGC-------------------CTTTGGAGCTAAGCTTAGCCTTGATAGGTGCAGGTGCAGCAGCT----AGCTA
GGGAGGGGGAGCTACTGCCCCC-GCCAGCAAGCGTGGCGTCGTCGGGGCGGCGCTTCCCATCGGTCTCCGCGGCCTACGC
GGACTGGATCGCGTCGGCCGGCGGCGACGACCTCTCGCTCGGCTTCAATGCCGCGGGCGCGTCCGCCGCCGGGCTCTGGG
CCCCCGCCTCGCGCCAGTCCGCCGCTCTCAACTACGGGATAGCGGCGGCCAACGGTGATGTCGGCATGGTCGTCCTCGCC
CCCGCCTCCTCCTTCCACCACCAGAGGGCCGCTGCTGCTGCCGCCGCGGCGGCCGACGGCGCCGACCAAGGGTTCGCGCT
CCTCTCCGCGGGCCAGTGCGGGCTCGCCGACCCTGGCGCTCCCAAGTCCGGCAGCGCCATCCAGTTCTGGCAATCGCACT
CGCAGCCCCCCGCGACGCCGCCCGCGGTTGCCCCCGCCGACAAGAAGCAGGTGGCCTCCGCGGTGGACTACGGCGGCGTC
TCCTCCGGATCCGGCGGCTCCACCACGTGCAGCGACTGCGGCAACCAGGCGAAGAAGGACTGCCCTCACCAGCGATGCCG
GACGTGCTGCAAGAGCCGCGGCTTCGACTGCACCACGCACGTCAGGAGCACCTGGATCCCGGCCGCCCGGCGCCGCGAGA
AGCACCCGCTCGGCGGCGACCTTTCCCCTCCCGCCGCTCCTGCCACGGCGGCCACCAAGAAACCGCGGTTCCACTCGTCC
CAGACCACGACCACGACCACCACCTCTCGCACCTCCACCTCCAACGGCACCTCCTCGAGCCAACAAGGTGATCGACCAGC
ACAGACGCACGCACGCACATCCCAAGTCTCAGCA-------CACATAATTCAAGAAACTTGGACACTAATCACATCTTCT
AT-CCCATCCTCTGCAGACGCGCCGTTCAGGGACAGCCTGCCGCGGCACGTGCGCGCGCCGGCGGTGTTCCGGTGCGTGC
GGGTGACCTCCGTCGACGACGGCGCGGACGAGTTCGCGTACCAGGCGGCGGTGAGCATCAACGGCCACATGTTCAGGGGG
TTCCTCTACGACCAGGGCGCCGACAACGGCCGCACCAGCAACGACGAGCCCAGCCACGCGCACGCGGCCGCAGTGCGTAG
CATCTCCGACCTCCACCTCGGCAACGCCTCCGCGGTGCCGCCGGACATGTACAACACCGTCAGCGGGGCGCTCATTCTCG
GCGGGATGGGCTATGGTAACACCATGAACTGAAAACTGTTACTCGTAGTGC---TAGCTAGTAAGCCTGGTGCAATAATG
GTAG----CCATCTTGTTACTACATGTCACCTCATTTCTTTCATCTC-ACATCACCAGTAGTGGTACTACCCTGTCTTCC
ATTTTGCTGCTGCATGCTGTGTGCCAGTGCCACAGCTAACTTCCAAGTCTTTTGATAGTAGTAGAAGTTGGAAAGAAAAT
GAAAGGAAAAGCAGTCAGTATTTCCAAGGTAAACTTGCTGTACAACATGCTACTATCTGATTTCTC-TATGTGGCTGATG
CTGTTGTGTTACCATTTTTTTTAACTTAACATGTTTGCATATGTTGGGAACTGCAAATCATATACAGTTAAAATCACCAT
GTTCTGTGGGTC----------------------------------------CTT---TGGAGTAAA-TTTTTTAGACAA
AACATTATTTGTAGTAATCACTTGACGCCATGGAGAGGTTGATGGTAGTAGTACTATTGTTAA-TTTGACAGCTGAAAAG
TTTGACTCTTTGATGCTCTTCCTAGTTCCCACGCCATCGACCACTTCATTTCATCCTCTTGCGTGCTATGGCTTCCGAAT
T---GCCAATCTTGTTTACCTTGTTCAGCTAG---TAGCACGTATACTCTACTATCTCTTTCCCAAATTTACGGGGTTGG
TAGGAATAGCTAGA-CATGGGTTGGATTCTTACTTGCTTTGTATGTGCTGTTAAGCATCTTATCGGTGCATTGGAACTTG
TAGCGGGAAAAAGAGAGCCAATGTGCAATGCATGTGGTGATAAGAATTCTTTTGCCCTCTTAAAATAACATATGCAGCTG
ATACTCTAGTAAATTACTTGGGTCACGATCATGGAAGCCAATAATGGTACAGTGCTCCATACATTACCCTTGGCCTGTTT
GCTAG---TAGTAGCTGCTTGTTAACAATATGATGAAGGGACATCTTCACTTAATCTTTTGTTGCGAGCCCCCATATTTA
TTCCCCCTGCTGCCGGATCCCAAATCCAGAATGAAAACATGCACCCCTCTGTTTCATAATATAAGATGTTTTTTCAAGCT
AACATGGTTTATAAAAATA-----TCTTATATTATGAGACGGATGAAGT-------------------------------
------------------------------------ACTAAGGAGTGGCCATATCTCAATGAACACAGGACTAAATTTGT
CTCATCAAGTACAGTGATAGAGATATATTTCCGATCAAGATTTTTCATCCATTCCATACTTGTAAGAATCTCTAACTTTG
ATCAGATTGTTCTTAGCGGCGAGAAATAACAATATCATATTTTTATGGGATTTCTTTTCTCAATTTTTTTTAATGAGATT
TGTTAGTTTCAGTCTGA-TTTTGTCTTTCTTCATTCCTAAGCAGGCCAAGTTATTACACAACAAAGTCATATTGTGCTGT
GGATCTATTGACTCTAAAGCTTGCATAAAGAAGTTTTCTGTAACTTCAG-TTTAGGAGTGCAAATTACAAATGATTTATG
AAAAT-CACTATACCTAATTTTTCTTGCATGAGAAACCAACGATGTTTAGATCTGTATCGTAAGTTTATGGGTGTACCGA
AGCACTGCTCTTTGCAGATTTAAAGTACTTCTAGGATGTCTACTATGTATTGAAAAATATATCAGTTCGGTTCCTCTAAG
ATTGGCAGGTGATCATTGGATCAAAGGAAATAATAAATAGATAAAGAACCACGGGGTTATTTTTTTGGCTATTTCCACCT
TGTTGTGTCATGTCAAATGTGAGTTTGGTCGATTTGCTTGAGCCACCGCGGCTTGAGGACGAAAATTATGCTGTGGTAGC
TGGTCGAAGGGGTTGGGTAAGCCATCTTGTCATCAGCAAAGCCGCTGTTATCTCATGTGTTGTTTCTACGGGGATCTTTT
GGCCCATGCTGCCGTGCCTAACTTTCGGGAGCACGGCTACTGTGCAGGGCGCTTGTT
>chr2D_2136
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-----------------------CCAGTGCCACAGCTAACTTCCAAGTCTTTTGATAGTAT---AAGTTGGAAAGAAAAT
GAAAGGAAAACCAATCACCATG----------------------------TTCCATGGGTAATTTTTTTCGTGGCTGATG
CTGCGAACCATGTT---------------------------------------CAAATCATATACAGTTCAAAGTGGCTC
ATGCTGCAACCCATGTTTCTTGGTTTTTCAAAGTGGCTGATGCTGTTAGTTTCTTCTTTGGAGTAATTTTTTTTAGACAA
AACATTATTTGTAGTAAGCACTTGACGCCATGGAGAGGTTGATAGTAGTACC---ATTGTTAA-TTTGGCAGCTGAAAAG
TGTGACTCTTT-ATGCTCTCCCTAGTCCCCACGCCATCGACCACTTCACTTCATCCTCTAGCGTGCTATGGCTTCCGAAC
TGCGGCCAGTCTTGTTTACCTTGTTCAACTAG---GAG----TATACT---CTATCTCTTTCCCAAATTTACGGGGTTGG
TAGGAATAGCAAGGCCAGGGGTTGGATTCTTACTTGCTTTGCATGTGTTGTTAAGCATCTTATCCATGCATTGGAACTTG
TAGCAGGAAAAAGAGAGCCAATGTGCAATGCATGTGGTGATAACAATTCTCTTGCCCTCTT-------------------
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>SNPs
--------------------------------------------------------------------------------
--------------------------------S------------------------S----------------------
---------------------------------------------------------S-------S--------------
------------------------------------------------------SSSSSSS-------------------
--------------------------------S-----------------------------------------------
-----S----------------------------------------------------------S---------------
-----------------------------------------------S-----------------SSSS--------S--
--------------------------------------------------------------------------------
-------------------------S-------------------------------------------------S----
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-------------------------------------------------------------------SS------S----
SS--S------------------------------------S----------S---------------------------
-----------------------------------------------------S----S------------------S--
------------S--------------------------------------------------S----------------
---------S---------------S------------------------------------------------------
-------------------------------S------------------------S-----------------S-----
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----------------------------------SSSSSSS--------------------S------------------
--------------------------------------------------------------------------------
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-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------------------------S----------------------------------S----S--------------
-----------------------------------S--------------------------------------------
--------------------------S-------------------------------S---------------------
-S---------------------------------------------------------S--------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S---S-------------------
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------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------S--------------S---------S----
------S---S---------SSSS---------S--S-------------------------------------------
--------------------------------------------------------------------------------
---S-----------S------------------S--------SS-----------------------------------
-----------------S-----------S--------------------------------------------------
----------------SS------------------S-----------------S------S------------------
------S--SSSSSSSSSS-------------------------------------------------------------
------S----S--------------S----S-S----------------------------------------------
--------------S------S---S-----------------------------------------S------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
---------------------S----------------------------------------------------------
---------------------------------------------------------
>forward_716
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--------------------------------------------------------ATGGAGAGGAGGGGTTTCCA----
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>reverse_2266
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-------------------------GGTGCCACAGCTAACTTCCA-----------------------------------
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>forward_1082
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----------------------CGCGCTCAACTACGGGATAA--------------------------------------
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>reverse_3171
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--------------------------------------------------TTTCCAGGTGTTTTTCCGAGC---------
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