>input_sequence_44630
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-----------------------------------------------------------ATGGAGATTTTCTTAAGTTTG
TGCTTAGTTACCGTAGCCACGGTGCTAGTCCTTTGGTTTCTTAGTTCTTCCAACGACAAAACCAAGACCAAGAAGAGGTT
GCCTCCTGGACCATGGACCCTTCCGATCATCGGCAGCCTCCACCACCTCGTCGGCCAGCTCCCGCACCGAGCCCTGGCGG
AGCTGTCTCGCCGGCACGGCCCGCTCATGTACCTCAAGTTCGGCGAGGTCCCCACCGTGGTGGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTCATGAAGACCAACGACCCTACCTTCGCGGACCGGGGAAGCGGCGTCGCGCTGGACATCGCCGGCTGCGG
CGGGAAGGGGATCATGCTGGCTCCCTACAGCGACCGTTGGCGGCAGATGCGGAAGGTCTGCATCGTGGAGCTTCTCAGCG
CCGCCCAGGTGAGGCGCATGGCGTCCATCAGGGTGGAGGAGGTGGCCGGCCTCGTCCGCTCCCTGGCCGCCTCGC---CC
GCTGGTAGCACCGTCAACCTCAGCGAGAAGTTGCCGGTGCTGGCGAACGACATCGTCGCGAGGGCCGCGTTCGGCGGGAA
GTGCGCGCAGCAGGGCGAGTATCTCCGTGAGCTCGACGACGTGATGACGCTGCTGGGGGGCTTCATCCTCGCTGACCTCT
TCCCGACGTCAAAGCTGGTGCGGTGGCTGGGCACCGGCGAGCGCCGCCTTAGGAGGAGCTGTGGCCGGATCCAGCGCATC
A------------TCGACGACCGCAGGGCGAGGCGTGCAGCC------------------GACGGTCCCCGCAGCACCGA
TGACGAGGACCTGCTAGACGTGCTGCTCAGGTTGCAGGAAGAGGACTCGTTGACATTCCCTTTAACCGCCGAAATAATTG
GCGCGGTCATCTTTGTGAGTACTG---TTATTCCATTCCTCGTCTCTTAATTTATTCTGTCCTATACTCT-----TATG-
--CCATGAAACCAGGAATACTAGGCGTGGTTATTACCTAACTACTCCCTCCGTCCCATGATATAAACACCTTTTTAACAA
TACGCTCATGTTAAAAACGCTCTTATATTATGAAACAGAGAAAATAATACTTACTATTGTTTCTTTTTGTATTCCATATG
TAGGACATGTTTGCAGCTGCTAGTGAGACCACAGGAACGACGTTGGAGTGGGCAATGTCGGAGCTCATGAACAATCCCAA
AGTCATGGCAAAGGCACAACTAGAGGTGCAGGAAGTGCTAGGTCCAGAACGAGCAGCCATCACAAACTCCGACCTCGGTG
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CTCCACTACCTTCGGATGGTGAT
CATGGAGACCCTGAGGCTGC------------------------ATCCTGCGGGTGTTATCATCCTCCGAGGGGCCAGAG
AGGATTGTGAAATATTAGGTTAAGACATTCCTAAAGGCACCAAGGTGCACATTAACGTCTTCGCAATATCGAGGGATTCT
CGATATTGGGAAGACCCTGAAGTTTTTCAACCAGAGAGGTTTGAGAACAGCGAC--------------------------
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----------------AAAGATTATAAGGGCATACACTTTGATTTCATCCCCTTTGGGGCTGGGAGACGGCAGTGCCCAG
GAATTCTGTTTGGTATGTCAACCCTGGAGCTAGCACTGGCGAACCTTCTCTACCACTTTGACTGGATGCTCCCTGATGCG
GTGATGACAAAGCCGGTGGACATGTCCGAAAAGTTTGGACTCACTGTATCTAGGAGGTCTGACCTCCTGCTTAGGGCTAT
TCCGCGTGCATGCTCCAAAGCTGCATAG----------------------------------------------------
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----------------------------------------------------------------------------
>chr5D_1_TraesCS5D01G470700
GCCTGTAACTACACTTGCACGCCCATTCGGCCAGAGGCGTAATTGCAGTTGCACGCCCACTTACATGTGTGCAACTGTGG
CTGCACGCTTGTTTGCAACACATGTTAATTGGTCGCGCGTAAGTGTAGTTGCACGCCCACCGGCTGTGTGCAACTGCGCG
CATGTCCACCGACCACGTGCAACCACATTTGCACGTCAGCTCACCGGCTGGTGTGTAATTGATGTTGTACGCTTGCCGGA
TGTGCCCAACTACATGTTTACTTGTCGTGCACAACTACAGTTGCATGTCCATGCACCCTGTGCGCTGTATATCTACCAAC
CGCTCACAACTAGATTTACGTGTTTTGTAGAAAAACAAAAACAGTAAAAGGTGAGGAAACAACAATAATTAGAGGGAAAG
TGAAAAAGAAGGAAAACAAAAAAGCAAAAAAATAATAATCTATGTTGATGTAAGCTGGATGAAATGTACTAGTTATTAAT
ATAAAAATAAGATGACATGCGCAGGCCACTTTGCCAGTTGAAATATCAACTTAAACAACCCCCTTCCATTTGCTTAAGCA
GCTGGAGTACTAAGTTTAGTGAAATCATTATTTGTCCATTGCTGAACATAGCTTCTTTGTTTGCACTTG-CACCAATAAG
TGAAGGACTTGTTGCGACCCATTCATGTATCATTGACATTGAGATTGATGGAGAGGGTCAAAATAAAATATCGGGACATC
GATGTCTCGACTTAGTAACGAAGAGGGTATATACCTGTTGAATGGAAGTTAGTATTAACACGTTATGTTTCTTTTT----
--------------CAGTATATTTGTTTTCACGATCAACAAGGTGATCCGCAGCTGCAAGGTAAGGTCCAAGCCCAAGCA
TCCGTTGACGCCGAATTACTTGCAATTATCTAGTCTACTACTTGTTGGGTTGGATGTATGCAGTATGCTATAAAGTTAGT
TGTTAGGCTCAAAGGCCAGCATCTAAAACACCGACCACTTGCTAATTAAGCTGTGCGCCATGGAGATTTTCTTAAGTTTG
TGCTTAGTTACCGTAGCCACGGTGCTAGTCCTTTGGTTTCTTAGTTCTTCCAACGACAAAACCAAGACCAAGAAGAGGTT
GCCTCCTGGACCATGGACCCTTCCGATCATCGGCAGCCTCCACCACCTCGTCGGCCAGCTCCCGCACCGAGCCCTGGCGG
AGCTGTCTCGCCGGCACGGCCCGCTCATGTACCTCAAGTTCGGCGAGGTCCCCACCGTGGTGGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTCATGAAGACCAACGACCCTACCTTCGCGGACCGGGGAAGCGGCGTCGCGCTGGACATCGCCGGCTGCGG
CGGGAAGGGGATCATGCTGGCTCCCTACAGCGACCGTTGGCGGCAGATGCGGAAGGTCTGCATCGTGGAGCTTCTCAGCG
CCGCCCAGGTGAGGCGCATGGCGTCCATCAGGGTGGAGGAGGTGGCCGGCCTCGTCCGCTCCCTGGCCGCCTCGC---CC
GCTGGTAGCACCGTCAACCTCAGCGAGAAGTTGCCGGTGCTGGCGAACGACATCGTCGCGAGGGCCGCGTTCGGCGGGAA
GTGCGCGCAGCAGGGCGAGTATCTCCGTGAGCTCGACGACGTGATGACGCTGCTGGGGGGCTTCATCCTCGCTGACCTCT
TCCCGACGTCAAAGCTGGTGCGGTGGCTGGGCACCGGCGAGCGCCGCCTTAGGAGGAGCTGTGGCCGGATCCAGCGCATC
A------------TCGACGACCGCAGGGCGAGGCGTGCAGCC------------------GACGGTCCCCGCAGCACCGA
TGACGAGGACCTGCTAGACGTGCTGCTCAGGTTGCAGGAAGAGGACTCGTTGACATTCCCTTTAACCGCCGAAATAATTG
GCGCGGTCATCTTTGTGAGTACTG---TTATTCCATTCCTCGTCTCTTAATTTATTCTGTCCTATACTCT-----TATG-
--CCATGAAACCAGGAATACTAGGCGTGGTTATTACCTAACTACTCCCTCCGTCCCATGATATAAACACCTTTTTAACAA
TACGCTCATGTTAAAAACGCTCTTATATTATGAAACAGAGAAAATAATACTTACTATTGTTTCTTTTTGTATTCCATATG
TAGGACATGTTTGCAGCTGCTAGTGAGACCACAGGAACGACGTTGGAGTGGGCAATGTCGGAGCTCATGAACAATCCCAA
AGTCATGGCAAAGGCACAACTAGAGGTGCAGGAAGTGCTAGGTCCAGAACGAGCAGCCATCACAAACTCCGACCTCGGTG
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CTCCACTACCTTCGGATGGTGAT
CATGGAGACCCTGAGGCTGC------------------------ATCCTGCGGGTGTTATCATCCTCCGAGGGGCCAGAG
AGGATTGTGAAATATTAGGTTAAGACATTCCTAAAGGCACCAAGGTGCACATTAACGTCTTCGCAATATCGAGGGATTCT
CGATATTGGGAAGACCCTGAAGTTTTTCAACCAGAGAGGTTTGAGAACAGCGAC--------------------------
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----------------AAAGATTATAAGGGCATACACTTTGATTTCATCCCCTTTGGGGCTGGGAGACGGCAGTGCCCAG
GAATTCTGTTTGGTATGTCAACCCTGGAGCTAGCACTGGCGAACCTTCTCTACCACTTTGACTGGATGCTCCCTGATGCG
GTGATGACAAAGCCGGTGGACATGTCCGAAAAGTTTGGACTCACTGTATCTAGGAGGTCTGACCTCCTGCTTAGGGCTAT
TCCGCGTGCATGCTCCAAAGCTGCATAGATTTGGACCTTGTTAAGTATGTCAACATATGTACACCTCCCTTTTATACCGA
CATGATCTTCTGTATACAAATAAGCTTAACGAAAATTATG----------------------------------------
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-----------------------GTTTTTTCTATCATTGCTCATAGAGTACTCTTCTTCACATATGCTCAAAAGCTGCGT
AGATTGGGATTGTGTTAAGTGTGTCAACATATCTACACTTCCCTTTTAACATACACCGACATCACCTGTTGTATACATAT
AAGCTTAACAAAACATTA-TGGTTTCACAATGTTGAACATGTATTTGAAAAATAAGTTCATGACATTTAGAAAAATATTC
TCATGCTCATGATGTTTTTGAAAATGTTCAACGTGTGTATAAAAGATGTTCAGTGTGTATTTGACAAATATGTTCATGAT
ATTTT--AAAAATATTCGCATGGTCGTG--ATATTTTTGAAAAATATTCAACATGTGTTTAGAAAATGTTCAACTTGTGT
TCCGAAAATGTTCAACACGA------TTTTTTTTAAATG---GACATGTATCTAAAAAATGTTTTACATGTATCTGAATA
TTGTTTGACGTGTATTTGAAAAAGAATTAACGTGCATTTCAAAAAATAAAAAAGCAAAAATTAACAAAAAAAGGAAAAAG
T---------AATTAGAGAACCAAAAAGAAAACCATTGAAAAACAATACAGATAGAAAATCGGGCGGAACCTTTACAAAC
TCGGTGGAAGGTTCCTAAATTCGGTCCATACCGGTTGGCCGACCAGTAAGGAAGAGGTTGTAGGCAAGGCTTCCTTCGGT
TGCAAATAAACAATACACAGC-CTGATGCAAAAAACAAATTTGGTTGTCTTAAAAAATCCGCTTCCAAAATTATTTTGAA
A-ATGAAAAACATATTCAACGTGAAAAATTGTTCGAAAAATGAAATAATGATCCAGAACTTTAAAATTGTTCACAAAACA
AAAAATTGTTCTTTAATTTTTAAATTGTTCATTAAAATACAAAAAAAACAAAATTCCAAAAACCTTTACAAAAACA
>chr5A_569
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--------ACTAAGTTTGGTGAAATCATTATTTGTCCATTGCTGAACACAGCTTCTTTATTTGCAACTTACACCAACAAG
TGAAGGACTTGTTGCGACCCATTCATGTATCATTGACATTGAGATTAATGGAGAGGGTCAAAATAAAATATAAGGACGTC
AATGTCTCGACTTAGTAATGAAGAGAGTATATACCTATTGAACGGAAGTTCGTATTAACACGTTATGTTTCTTGCAAAAA
ACAAACACGTTATGCAGTATATTTGTTTTCACGATCAGG------------------------------AAGCCCAAGCA
TCCGTTGACGCCGAATTACTTCCAATTAGCTAGTCTACTACTAGTTGGGTTGGATGTATGCGGTATGCTATAAAGTTGGT
TGTTAGCCTCAAA-GCCAGCAGCTAAAACACG--------------------GTGCGCCATGGAGATTTTCTTAAGTTTG
TGCTTATTTATCGTAGCCACGGTGCTAGTCCTTTGGTTTCTTAGCTCTTCCCATGACAAGTCCAAGACCAAGAAGAGGTT
GCCCCCCGGACCATGGACCCTTCCGATCATCGGCAGCCTCCACCACCTCGTCGGCCACCTCCCGCACCGAGCCCTGTCGG
AGCTGTCTCGCCGGCACGGCCCGCTCATGTACCTCAAGTTCGGCGAGGTCCCCACCGTGGTGGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTCATGAAGACCAACGACCCTACCTTCGCGGACCGGGGAAGCGGCGTCGCGCTGGACATCGCCGGCTGCGG
CGGGAAGGGGATCATGCTGGCCCCCTACAGCGACCGTTGGCGGCAGATGCGGAAGGTCTGCGTCGTGGAGCTTCTTAGCG
CCGCGCAGGTGAGGCGCATGGCGTCCATTAGGGCCGAGGAGATGGCCGGCCTCGTCCGCTCCCTGGCCGCCTCGC---CC
GCGGGTGGCACCGTGAACCTCAGTGAGAAGTTGCCGGTGCTGGCGAACGACATCGTCGCTAGGGCCGCGTTCGGTGGGAA
GTGCGCGCAACAGGGAGAGTATCTCCGCGAGCTCGACGAGGTCATGACGCTGCTGGGGGGCTTCATCCTCGCTGACCTCT
TCCCGTCGTCAAAGCTCGTGCGGTGGCTGGGCACTGGCGAGCGCCGGCTGAGGAGGAGTTGTGGCCGGATCCAGCGCATC
ATCGACAACATCATCGACGACCGCAGGGCGAGGCGTGCAGCC------------------GACGGTCCCCGTAGCACCGA
CGACGAGGACCTGCTAGACGTGCTGCTCAGGTTGCAGGAAGAGGACTCGTTGACATTCCCTTTAACCGCGGAAATAATTG
GCGTGGTCATCTTTGTGAGTATGCCGATTATTCCATTCCTTTTCTCTCAATTTCC-------TATACTCCTATGCCATGA
GCCCATGACACAAGGAATAATAGGCGTGGTTATCTAACTACAGTATC---------------------------------
--------------------------------------------TAATAAGTACTATTGTTTGTTTCTAAAATCTAAAAA
GTGGCCGCGCGCTATATGGA------------------------------------------------------------
--------------------------------------------CAGAACGAGCGGCCGCGTTCTGACCGCTCGATCTCG
CTCGTTGCACGTGGATGACAAGGCCCACCACTACCCGAAGGACCAACCCACCCCCGGTTTCCCCTAGCTAGCCGCCACTC
CCTCACCCCTCTCTCTCCCGCGCGCGGCCATGGCAGCCGTCGGCGCACCTTCTGCCTAGCTGTTCCTGCCGCTGGTCCTC
TGCATCTTCCGCTGCTGCAGGTCATCACCGTAGGTCGCCTTTGGTCAAGGTTGGCCGCGCCACCGCCTCTGGTCGAACAC
TCAGGACACCCCGCCGCCCTGATCGACCGGACAGCCCGACACATAGCGGGCTGTTGTGCTGGTGCTCCTAGGTGTAACAC
GGGAAGAAGCGCAGATCGGCGGCCGGCCTTCTCTGTCAACTTGAATTTGGGGTACACCGTACACCACCGCCGCCCCCAGT
GGTGGAGCTGGGTGCGGATGCTGCTGCTGCTTTGTGCCGCTGGCAGCTGCCATGAGGAGGCGCAGGCAAGGAATCGTGAT
AGAAATAGTCGTGTTTCTGTGATTGATTGACAGTGGCTCTCTGTGCTGAGACTTGAGAGAGAGAGAGAGAGAGAGAGAGA
GGTGAGATGGGAAGGTTGGTGGCATGGTTCGTTGTGTATATGCACGTAGGTGTTGCCATGGTGATGGATGAAGTGGTTTA
GTTAGATTTTAAGACTTGGTTTGTGAGGAGAGAAGTGAGGAAGAGATTGTTGGATGGAATTAAGCCGGCCGACCATGCAT
GCATACGTGTAGGTAGGAAGAAGTGTAGCTTAGCTTGCAAGTTATGTATACATCGAGACATGACCTCATGGTTTAATCTG
CTGGCTAATTACAAGCTAACCGAATCCATGCAGTGATGTTTAGTTGGCTTGTAATGTAGTCTAGTTGTACATATGTTGAT
GTTTAGTTGGCAGAGAAGACTAGTTGAACACATATATGCTCAGTTGGTTTGTAACCTAGTCCAGTTGCACACACATTAAT
ATTTAGTTGGCTTGTAATATAGTCTAGTTGCACACACATTGATGTTTAGTTGGCAGAAAATACTAGTTGCACATACATTC
TCAGTTGGCTTATAATGTAGTCTACTTGCACACACATTGATGCTTAGTTGACAGTGAAGACTAGTTGCACACACATATGC
TCAGTTGGCTTGTAATGTAGTCTAGTTGCACACACATTAATGTTTAGTTGGCTTATAATGTAGCCTAGTTACACACACAT
TGATGTTTAGTTGGCAGAGAAGACTAGTTGCACACACATATGCTCAGTTGGCTTGTAATTTAGTCTTGTTGCACACACAT
TGATGTTTAGTTGGCAGGACTATTGGCACACGCATATACTCAGTTGGCACCGCAATGTAGTCTAGTTTGCACACACATTG
ATGTTTAGTTTGCAGGACTATTGGCACACACATATGCTCAGTTGGCGCGACAATGTAGTCTAGTTGCACACATATTGATG
TTTAGTTGGCAGAAAGACTAATTCGTCGAAACATCTACTTTTGAAGAGCACGTCACAAGGGTTTTAACAATAAAAAGGAT
CTGAATTTCGACACGCGGTTTAATTTTTTTTTATAATTCTGAAAACAAAAAATTAATGCACTAGGGACGAACATGGGGAA
TATGCATCCATCACGTGAGAAAAGACCACATAAGGTGATTAATTAGCAGTGTC------------CTTTTGAAAATATAT
GGAGAGAAAATTAGAAGATATATTTTTTTTATAA----------------------------------------------
---------------TTTTGAAAATGTTCAGCGTGTGTATAAAAGATATTCAGTGTGTATTTGGCAAATATGATCATGAT
ATTTCTAAAAATA--TCGCATGGTCGTG--ATATTTTTGAAAAATATTCGACATGTGTTCAGAAAATGTTCAACTTGTGT
TCGGAAAATGTTCAACGTGATTGTTTTTTTTCTTAAATT---GACATGCATCTAAAAAATGTTTTACATGTATCTAAATA
TTGTTTGACATGTATTTGAAAAA-AAATAAAGTGCATTGCAAAAAATAAAAAAAG------TAACAACAAAACGGAAAAA
GAAAAGTGGAAATTAGAGAA--AAAAAGAAAACCATTGAAAAACAATACAGATAGAAAATCGGGCGGAACCTTTACAAAC
TCGGTGGAAGGTTCCTAAATTCGGTCCACACCAGTTGGCCGACCAGTAAGGAAGAGGTTGTAGGCAAGGCTTCCTTCGGT
AGCAAATAAACAATACACAGCTCTGATGCAAAAATCAAATTTGGTGGTCTTAAAAAATCCGCTTGCGAAATTATTTTGAT
ACATGAAAAACATATTCAACGTGAAAAATTGTTCGAAAAATGAAATAATGTTCAAGAACTTTAAAATCGTTCAGAAAACA
AAAAAATGTTCTTTAATTTTGAAATTGTTCATTAAAAT---AAAAAAACACAATTCCAAAAACCTTTTCGAAAAAC
>chr5B_1071
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-------------------------------------------------CCAGCGACAAAACCAAGACCAAGAAAAGGTT
GCCCCCTGGACCATGGACCCTTCCGATCATCGGTAGCCTCCACCACCTTGTCGGCCAGCTCCCGCACCAGGCCCTGGCGG
AGCTGTCTCGCTGGCACGACCCGCTCATGTACCTCAAGTTCGGCGAGGTCCCCACCGTGGTAGTCTCCAGCGCCGAGGCG
GCGGCACTGGTCATGAAGACCATCGACCCTACCTTCGCGGACCGGGGAAGCGGTGTCACGCTGGACATCGCCGGCTGCGA
CGGGAAGGGGATCATGCTGGCCCCCTACAGCGACCGTTGGCGGTAAATGCGGAAGGTCTGCATCGTGGAGCTTCTCAGCG
CCGCATAGGTGAGGCGCATGGCGTCCATCAGGGCGGAGGAGGTGGC-GGCCTCGTCCGCTCCCTGGCCGCCTTGC---CT
GCGGGTAGCACCGTCAACCTCAGCGAGAAGTTGTCGATGCTCGCTAACGACATCGTCGCGAGGGCCGCGTTCGGCGGGAA
GTGCGCGCAGCAGGGAGAGTACCTCCGCGAGCTCGATGAGGTGATGATGCTGTTGGGGGGCTTCATCCTCGCCGACCTCT
TCCCGTCGTCGAAGTTGGTGTAGTGGCTGGGCAGCGGCGATCGACGGCTGAGGAGGAGCT--------------------
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>chr2B_1101
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-------------------------------------------------------------------------------T
GCCTCCTGGGCCATGGACTCTTCCCTTCATCGGAAGCCTCCACCACGTCGCCAGCGTGCTCCCGCACCGCAAGATGATGG
AGATGTCTCGCCGGCATGG-CCGCTGATGCACCTTATGCTCGGCGAGGTCCCAACGGTGATCGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTGATGAAGACCAACGACCTTGCCTTTGCTGGCCGGCCTCGCAGCGCGACGCTGGACATCTTCGGCTGCGG
CGGGAGGGGCATCGTCTTCGCCCCCTACGGTGACCCATGGCGCCAGATGCGCAAGGTCTGCACCATGGAGCTCCTCAGCT
CCAAGCAGGTGAGGCGTATGGACGGTATCAGGCCAGACCAGGTGGTCAGCCTTCTCCATTATGTCGCAGACGCGGCATCC
ATGGGTGCCGTCGTCAACGTCAGCGAGAAGGTGATGGCGCTCAGCAACGACGTGGTGTCGCGGGCGGTGTTTGGTGGCAA
GTTCCCGCAGCAGGAGGAGTACCTCCGGGAGCTGGATGAGGCGTTCGTGCTGCTAGGTGGTTTCTGCCTCGTCGACCTCT
TCCCGTCATCGCGGCTGGTGCGGTGGCTGTGCAAGGGAGAGCGCCACATGAGGAGGAGCTATGGCCACATCCAACGTATC
A------------ACGCCAACGTCATCGAGGGGCATAAGGCGGCGCGAGATGCCACACAGGACGGTGCCTCCAGCACCGA
CGATGATGACTTGCTGGACGTGCTACTCAGGCTCCAGGAGAAGGACGCGTTCACATTCCCTATGACCACGGAGAGTATAG
GTGCCGTCTTATTTGTGAGTA-----------------------------------------------------------
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>chr2B_1101
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-------------------------------------------------------------------------------T
GCCTCCTGGGCCATGGACTCTTCCCTTCATCGGAAGCCTCCACCACGTCGCCAGCGTGCTCCCGCACCGCAAGATGATGG
AGATGTCTCGCCGGCATGGGCCGCTGATGCACCTTATGCTCGGCGAGGTCCCAACGGTGATCGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTGATGAAGACCAATGACCTTGCCTTTGTTGGCCGGCCTCGCAGCGCGACGCTGGACATCTTCGGCTGCGG
CGGGAGGGGCATCGTCTTCGCCCCCTACGGTGACCCATGGCGCCAGATGCGCAAGGTCTGCACCATGGAGCTCCTCAGCT
CCAAGCAGGTGAGGCGTATGGACGGTATCAGGCCAGACCAGGTGGGCAGCCTTCTCCATTATGTCGCAGACGCGGCATCC
ATGGGTGCCGTCGTCAACGTCAGCGAGAAGGTGATGGCGCTCAGCAACGACGTGGTGTCGCGGGCGGTGTTTGGCGGCAA
GTTCCCGCAGCAGGAGGAGTACCTCTGGGAGCTGGATGAGGCGTTCGTGCTGCTAGGTGGTTTCTGCCTCGTCGACCTCT
TCCCGTCATCGCGGCTGGTGCGGTGGCTGTGCAAGGGAGAGCGCCACATGAGGAGGAGCTATGGCCACATCCAACGTATC
A------------ACGCCGACGTCATCGAGGGGCATAAGGCAACGCGAGCTGCCACACAGGACGGTGCCTCCAGCACCGA
CGATGATGACTTGCTGGACGTGCTACTCAGGCTCCAGGAGAAGGACGCGTTCACATTCCCTATGACCACGGAGAGTATAG
GTGCCGTCTTATTTGTGAGTA-----------------------------------------------------------
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>chr2B_1101
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-------------------------------------------------------------------------------T
GCCTCCTGGGCCATGGACTGTTCCCTTCATCGGAAGCCTCCACCACGTCGCCAGCGTGCTCCCGCACCGCAAGATGATGG
AGATGTCTCGCCGGCATGG-CCGCTGATGCACCTTATGCTCGGCGAGGTCCCAACGGTGATAGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTGATGAAGACCAACGACCTTGCCTTTGCTGGCCGGCCTCGCAGCGCGATGCTGGACATCTTCGGCTGCGG
CGGGAGGGGCATCGTCTTCGCCCCCTACGGTGACCCATGGCGCCAGATGCGAAAGGTCTGCACCATGGAGCTCCTCAGCT
CCAAGCAGGTGAGGCGTATGGACGGTATCAGGCCAGACCAGGTGGGCAGCCTTCTCCATTATGTCGCAGACGCGGCATCC
ATGGGTGCCGTCGTCAACGTCAGCGAGAAGGTGATGGCGCTCAGCAACGACGTGGTGTGGCGGGCGGTGTTTGGCGGCAA
GTTCCCGCAGCAGGAGGAGTACCTCCGAGAGCTGGATGAGGCGTTCGTGCTGCTAGGTGGTTTCTGCCTCGTCGACCTCT
TCCCGTCATCGCGGCTGGTGCGGTGGCTGTGCAAGGGAGAGCGCCACATGAGGAGGAGCTATGGCCACATCCAACGTATC
A------------ACGCCAACGTCATCGAGGGGCATAAGGCGGCGTGAGCTGCCACACAGGACGGTGCCTCCAGCACCGA
CGATGATGACTTGCTGGACGTGCTACTCAGGCTCCAGGAGAAGGACGCGTTCACATTCCCTATGACCACGGAGAGTATAG
GTGCCGTCTTATTTGTGAGTA-----------------------------------------------------------
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>chr2B_1101
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-------------------------------------------------------------------------------T
GCCTCCTGGGCCATGGACTCTTCCCTTCATCAGAAGCCTCCACCACGTCGCCAGCGTGCTCCCGCACCGCAAGATGATGG
AGATGTGTCGCCGGCATGGGCCGCTGATGCACCTTATGCTCGGCGAGGTCCCAACGGTGATCGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTGATGAAGACCAACGACCTTGCCTTTGCTGGCCGGCCTCGCAGCGCGACGCTGGACATCTTCGGCTGCGG
CGGGAGGGGCATCGTCTTCGCCCCCTACGGTGACCCATGGCGCCAGATGCGCAAGGTCTGCACCATGGAGCTCCTGAGCT
CCAAGCAGGTGAGGCGTATGGACGGTATCAGGCCAGACCAGGTGGGCAGCCTTCTCCATTATGTCGCAGACGCGGCATCC
ATGGGTGCCGTCGTCAACGTCAGCGAGAAGATGATGGCGCTCAGCAACGACGTGGTGTCGCGGGCGGTGTTTGGCGGCAA
GTTCCCGCAGCAGGAGGAGTACCTCCGGGAGCTGGATGAGGCGTTCGTGCTGCTAGGTGGTTTCTGCCTCGTCGACCTCT
TCCCGTCATCGCGGCTGGTGCGGTGGCTATGCAAGGGAGAGCGCCACATGAGGAGGAGCTATGGCCACATCCAACGTATC
A------------ACGCCGACGTCATCGAGGGGCATAAGGCGGCGCGAGCTGCCACACAGGACGGTGCCTCCAGCACCGA
CGATGATGACTTGCTGGACGTGCTACTCAGGCTCCAGGAGAAGGACGCGTTCACATTCCCTATGACCACGGAGAGTATAG
GTGCCGTCTTATTTGTGAGTA-----------------------------------------------------------
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>chr2B_1101
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-------------------------------------------------------------------------------T
GCCTCCTGGGCCATGGACTCTTCCCTTCATCGGAAGCCTCCACCACGTCGCCAGCGTGCTCCCACACCGCAGGATGATGG
AGATGTCTCGCCGGCAT-GGCCGCTGATGCACCTTATGCTCGGCGAGGTCCCAACGGTGATCGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTGATGAAGACCAACGACCTTGCCTTTGCTGGCCGGCCTCGCAGCGCGACGCTGGACATCTTCGGCTGCGG
CGGGAGGGGCATCGTCTTCGCCCCCTACGGTGACCCATGGCGCCAGATGCGCAAGGTCTGCACCATGGAGCTCCTCAGCT
CCAAGCAGGTGAGGCGTATGGACGGTATCAGGCCAGACCAGGTGGGCAGCCTTCTCCATTATGTCGCAGACGCGGCATCC
ATGGGTGCCGTCGTCAGCGTCAGCGAGAAGGTGATGGCACTCAGCAACGACGTGGTGTCGCGGGCGGTGTTTGGCGGCAA
GTTCCCACAGCAGGAGGAGTACCTCCGGGAGCTGGATGAGGCGTTCGTGCTGCTAGGTGGTTTCTGCCTCGTCGACCTCT
TCCCGTCATCGCGGCTGGTGCGGTGGCTGTGCAAGGGAGAGCGCCACATGAGGAGGAGCTATGGCCACATCCAACGTATC
A------------ACGCCAACGTCATCGAGGGGCATAAGGCGGCGCGAGCTGCCACACAGGACGGTGCCTCCAGCACCGA
CGATGATGACTTGCTGGACGTGCTACTCAGGCTCCAGGAGAAGGACGCGTTCACATTGCCTATGACCACGGAGAGTATAG
GTGCCGTCTTATTTGTGAGTA-----------------------------------------------------------
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>chrUn_1101
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-------------------------------------------------------------------------------T
GCCTCCTGGGCCATGGACTCTTCCCTTCATCGAAAGCCTCCACCACGTCGCCAGCGTGCTCCCGCACCGCAAGATGATGG
AGATGTGTCGCCGGCATGGGCCGCTGATGCACCTTATGCTCGGCGAGGTCCCAACGGTGATCGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTGATGAAGACCAACGACCTTGCCTTTGCTGGCCGGCCTCGCAGCGCGACGCTGGACATCTTCGGCTGCGG
CGGGAGGGGCATCGTCTTCGCCCCCTACGGTGACCCATGGCGCCAGATGCGCAAGGTCTGCACCATGGAGCTCCTGAGCT
CCAAGCAGGTGAGGCGTATGGACGGTATCAGGCCAGACCAGGTGGGCAGCCTTCTCCATTATGTCGCAGACGTGGCATCC
ATGGGTGCCGTCGTCAACGTCAGCGAGAAGATGATGGCGCTCAGCAACGACGTGGTGTCGCGGGCGGTGTTTGGCGGCAA
GTTCCCGCAGCAGGAGGAGTACCTCCGGGAGCTGGATGAGGCGTTCGTGCTGCTAGGTGGTTTCTGCCTCGTCGACCTCT
TCCCGTCATCGCGGCTGGTGCGGTGGCTGTGCAAGGGAGAGCGCCACATGAGGAGGAGCTATGGCCACATCCAACGTATC
A------------ACGCCGACGTCATCGAGGGGCATAAGGCGGCGCGAGCTGCCACACAGGACGGTGCCTCCAGCACCGA
CGATGATGACTTGCTGGACGTGCTACTCAGGCTCCAGGAGAAGGACGCGTTCACATTCCCTATGACCACGGAGAGTATAG
GTGCCGTCTTATTTGTGAGTA-----------------------------------------------------------
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>chrUn_1101
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
GCCTCCTGGGCCATGGACTCTTCCCTTCATCAAAAGCCTCCACCACGTCGCCAGCGTGCTCCCGCACCGCAAGATGATGG
AGATGTGTCGCCGGCATGGGCCGCTGATGCACCTTATGCTCGGCGAGGTCCCAACGGTGATCGTCTCCAGCGCCGAGGCG
GCGGCGCTGGTGATGAAGACCAACGACCTTGCCTTTGCTGGCCGGCCTCGCAGCGCGACGCTGGACATCTTCGGCTGCGG
CGGGAGGGGCATCGTCTTCGCCCCCTACGGTGACCCATGGCGCCAGATGCGCAAGGTCTGCACCATGGAGCTCCTGAGCT
CCAAGCAGGTGAGGCGTATGGACGGTATCAGGCCAGACCAGGTGGGCAGCCTTCTCCATTATGTCGCAGACGCGGCATCC
ATGGGTGCCGTCGTCAACGTCAGCGAGAAGATGATGGCGCTCAGCAACGACGTGGTGTCGCGGGCGGTGTTTGGCGGCAA
GTTCCCGCAGCAGGAGGAGTACCTCCGGGAGCTGGATGAGGCGTTCGTGCTGCTAGGTGGTTTCTGCCTCGTCGACCTCT
TCCCGTCATCGCGGCTGGTGCGGTGGCT----------------------------------------------------
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>chr5B_1714
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-------------------------------------------------------GAGCTGCGGCCGGATCCAGCGCATC
A------------TCGACGACCGCAGGGCGAGGCGTGCAGCC------------------GACGGTCCCCGCAGCACCGA
CAATGAGGACCTGCTAGACGTGCTCCTCAGGTTGCAGGAGGAGGAATCGTTGACATTCCCTTTAACCACGAAAATAATTG
GCGTGGTCATCTTTGTGAGTACTG---TTATTCCATTCCTCCTCTCCTAATTTCTTCTGTCGTATACTCCGATCCTATG-
--CCATGAAACCAAGAATAATAGGCATGGTTACCAACCACCTAATTT---------------------------------
--------------------------------------------------------------------------------
-----------------TGCTAGTGATACCACAAGAACGACGTTGGAGTGGGCAATGTCAGAGCTCTTGAACAACCCCAA
AGTCATGGCAAAGGCACAACTAGAGTTGCAGGAAGTGCTAGGTCCGGACCGAGCAGCCATCACAAACTCCGACCTCGGTG
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CTCCACTACCTTTGGATGGTCAT
CATGGAGACCCTGAGGTTGC------------------------ATCCTGCGGGTGTTATCATCCTCCGAGGGGCCAGAG
AGGATTGTAAAATATTAGGTTATGGCATTCCTAAAAGCACCAAGGTGCACATTAACGTCTTCGCAATATCGAGGGACTCT
GGATATTGGGAAGACCCTGAAGCTTTTAAACCAGAGAGGTTTGAGAACAACGAC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------ATAGATTATAAGGGCACACACTTTGATTTCATCCCCTTCGGGGCTGGGAGACGGCAGTGCCCAG
GAATTCTATTTGGTATGTCAACCCTGGAGCTAGCACTAGCGAACCTTCTCTATCACTTTGACTAGATGCTCCCTGATGCG
GCCATCACACAGTCGGTGGACATGTCCGAAAAGTTTGGACTCACTGTATCTAGGAGGTCTGACCTTCTGCTTAGGGCTAT
TCCGCGTGTATGCTCCAAAGATGCGTAGATTTGGACCTTGTTCATTGTGTCAACATATCTACACCTCCCTTTTACACCGA
CATCATCTTCTGTATACAAATAAGCATAACGAAAATTATG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTTTTTTTTATCATTGCTCATAGAGTACTCTTGTTCACATATGCTCCAAAGCTGCGT
AGATTTGGATTGTGTTAAGTGTGTCAACATATCTACACTTCCCCTTTAACATACACCGACATCATCTTTTGTAAACATAT
AAGCTTAACAAAAACATTTTGGTTTCACAATGTTGAACATGTATTTGAAAAATAAGGTCATGACATTTAGAAAAATAT-C
TCATGCTCATGATG-TTTTTAAAATGTTCAACGTGTGTATAAAAGATGTTCAATGTCTATTTGAAAATTATGTTCATGGT
ATTTAGAAAAAATATTCACATGGTCGTGATATATTTTAGAAAAATGTTCAACGTGTGTTTAGAAAATGTTCAACTTGTGT
TCCGAAAATATTCAACGCGA------ATTTTAAAAAAAATTCGACATGTATCTAAAAAATGTTTTACATGTATCTGGATA
TTGTTTGACGTGTATTTGAAAAA-AATTAACGTTTATTTCAAAAAAGAAAAAAGAAAAAAGAAACAACAAAACAGAAAAG
GTAAAGCGGAAATTAGAGAACGAAAAGGAAAACCATTGAAAAACAATAGAGATAGAAAATCGGGTGGAACATTTACAAAC
TCGGTGGAAGGTTCCTAAATTCGGTCCTTACCGGTTGGCCACCCAGTAAGGAAGACGTTGTAGGCAAGGCTTCCTTTGGT
TGCAAATAAACAATACACAGCTCTGATGGAAGAAACATATTTGGTAGTCTTAAAAAATCCGCTTCGAAAATTATTTTGAT
ACATGAAAAAAATATTCAACATGAAAGATTGTTTGAAAAATGAAATAATGTTCCAGAACTGTAAAATTGTTC--------
----------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS---------S------------------------------S---------S------SS-S-------S---
----------------------------------------------S------------------------SS----S--
S-----------------S------S----------S-----S-------S----------------------SSS----
-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
---------------------S------S-------------S------------------S---------------S--
------S------S-------S---------SSSSSSSSSSSSSSSSSSSSS----------------------------
------S---S---------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
----S----------------------------S----------------------------------------------
--S-----------------------------------------------------------------------------
---------------S-----------S-----------S----------------------------------------
-----S-------------------------------------------S------------------------------
--------------------------------------------------------------------------------
S--------------------------------------------------------------------S----------
-----------------------------------------S-----------S-------S-------S----------
-------------------S-------------S-S-S-----S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SS-----------S---S-SS-S--S-S-SS
SS--S-SS-SSSSSSSS---------S------S-------------------------S------S-------S-----
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S-------S--
--------------------------------------------------------------------------------
----------------------S-S----------S----------------------------------------S---
S---------------------S----S---------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------S---------------------S-------------------------
-------------------------------------S--------------S---------------------------
-SS--S---S--S----------------------------------------------------S--------------
--------S-----------S---S-----------------S-S-S-----------S---------------S-----
---S---------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S------S------------------------S------------------------
-----S----------------------------------------------------------S--S-----S------
-------------S-S----------------------------------------S---------------------S-
--------------S-----------------------------------------------------------------
----S---------------------------------------------------------------------------
----------------S--------------S------S-----------------------------------------
-----------------------S------------------------------S-----S------S----S-S-----
S--------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S---------------------------------S
--------------------------------------------------S----------------------S------
-----S--------------S-----------------SSS---------S----------------S-S----SS
>forward_200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AACCACATTTGCACGTCAGC----------------------------------------
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----------------------------------------------------------------------------
>reverse_2171
--------------------------------------------------------------------------------
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----------TTGCAGCTGCTAGTGAGACC--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_2060
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CTACTCCCTCCGTCCCATGA--------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_3896
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------CTTCACATATGCTCAAAAGCTGC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------
