>input_sequence_44618
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--------------------------------------------------------------ATGTCGTCCTCCTCCTTG
TCCAAGGCCAGATTCGAGGTCAGTAATCTCCTCTTCCCCCTCTCTCAAGTCAA--TTCCTCTACCCTACCCTACCTACTT
CATCATCTTCATCATCATCATCATCATCATCATCTCATATACACTAGAT--AGATAAGATGATAATTCACAGGGCAAGAC
CAGA-----AATCGAATCTGACATCAATTGCAACCTCAATTGTCTTGCTAATTATACATTACATACCATACATACATACA
TAC-TACTAGTAATTGCACTAAGTA-------------AAGAGGATGGGATGGATTACCTCTCCTCTCCTCACCTCAACA
ATTGCTAGGCCTAGTACCAGTACCAGGGGGTGCTGATTCTTTCCAAGCAAGCAGAGTAAAGCTTGCAATTGCACTTGAGC
TTCAACACCAGCCATGCCGTGTCCGTCTCATCTCATCCGCTCTCTTGTCTTCTCTTCTCTTGTCG----------TTGGC
GTGCGTGCAGGGTAAAGGAG------------GCGGAGCCGGGAGATCCATATCGCTGGCCGCCTCCAGGGCCAAGCT--
-------CGCCGCAGCCACCAAGAAAGCTACTACTACTAGTACAGCCGGAGGC---GGGCGGGGCAAGGGCAAGGC---G
GCCAAGAAGGTCTTCTCCCTCACCGGCCAGAAGTTCGAAACACCAGAGGAGGTC--TCTCTCAAATTC------------
--TTCTTTCATCATACTCC---TACTTGTAGTATGTATCT------------CATCTGATCTGCA-----------CAAG
A--AAATTCTCTACTGATTTGATTTCACTCGCAGAGGGAGCCCCTGAGGATCTTCTATCAATCGCTCTCCAACCAGATCC
CATCCAGCGACATGGCCGAATTCTGGTACCTAC----CCAC-CCCAC---------------CTCTGCTCCACCAATTGC
TCACCTGTTACTA--TACTAGTGCTTGCTTGACCACA-------------------------------------AGTTAC
TAGT-----GCTAGTCTGATCCATCCATCCATTGATTTCTCTTCTCTGAATGTCACTCAATCTAGATACGTCCATTTTCG
AGACAAGTAATTTCGAACGGAGGCACATC-----TACAGTTTGCGACCTAATTACACTA-GTAGTAGTATTCACAGACAA
CTTCACTCTCAAACTCTGAATTACACCTCCATAGTT---------------CACACACACTTGAAAAATGTATCCTCTTC
CAAATTTACTACTCCATCAATATTATACTGCTGCTGCAGACTTCCCTATACTGCTACTCCACCAATATTTTACTACAGCA
ACAACAGTCGGACCTCACCTCAAGGGGTTACACACAGAATCACCTACTAGTAG---TTTACTGCAGCAATATGTATGTTA
TACCACCACACCATTGCTCTGCA------------ATGTATGTATGTATGTATGTATGTATATATGTGTGTATGTAATAA
TACTTACCTGACAGACACAACACACACACACACACATCTTGCAGGCTAATGGAGCACGGCCTGTTATCTCCGGAGAGAGC
CAAGAAAGCCTACGACAGGAAGCTCAAACGGCAGCAGCAGATCAAATCAGGGATCCCCATCAAGTCGTCAAATTCCACCA
CTGTCAACAAGCACAATAACAACAATAA---------ACCTGCAGAGAGCTGGAAGAAACCTGTACCAGTGGTTTCTTCT
TCTTCCACAGCGCGTCACAACACAGATCATTCCGCCGGCAAGGCCAAGAGAAGAGTCGAGTACAGCAGCGACGACGACGA
CGACGACAAAGAATTCATTGTCAAGCTCAAGAGACCCAATTTCAACTCCAACTCCAATTCCACTTCCAGGGGTGGCTGA-
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>chr1B_1_TraesCS1B01G479600
GCCCCCTTCATCCACCAGTGCATGTCATGCCATCTGTCTTTTCCTTCCATCTCTTTTATTTCGACATCGAAAGTCGTCGT
CGTCTTCTTCTTCTTCTTCCTCTTCTTCTTCACCGGACCGCCGGATCATACATACGCAAGGGCGGCCACATATATGATTT
GATGTCGCCTGTCATTTTTCTTCATCAA---TTTTTCTGTCATGACAAGTACCTATCGATCGATGGTGTATGAGCTAGTA
TATCATTTTTCTTCTTCTGATAAACATAGGTTTTATTGACTTTTGACGTC-GCATCGATGCCATGTAACCATACATAATT
CACACTCAGCTACCC--------------TGTGCACAACTCATATTGACCCACGCAAACATTTTGACCAACGGTTTGACA
AAATGAAGG-AAAGCCAGTTCAACAAGACAAGACATGCCCGGTAAA-AAATCCTCCTTGCTTCTATTTCTACCTTGTGCT
CCAGCGGATGTAATACTGGGAATGAACTACCTAGTAGTACTACAGAGCCAATGTAAGTATACACGTGTGTTTGATCTCCG
AGTCTCATGTATGATGACTTGTTGTGGCCGCATGCAATGCGTTTGTGTAATGAATATATATGTGTTTATTTCAGAAAGAA
AAAAAAAAGATCTTTTGTTTTCTATACTAGGGAAGATGTGTGTGTTGTTGGGTTGGCAAAAAAACAAGGAGTTGTGGGCT
TAGCTTAGCGTAGCTGGGCTGGGTAGTTTGCCCAATGGATGTGTGATTTGGATTGGATTGAAGGGAAAAAAAAGTGTTGA
TGGGTTGGGGTGGGGGAAAGGAAAGGAAAGGAAGTTTGTGTCCGTGTCGCACTGAAATCCACGCCACCCCGCCCCCAACC
CCACCCCACGCCAAGCGCGTGCTATTATATCCTCTGCACCGCTCCTGATCTGAATTTCCCCTTTCCTCTTCTTCTTCTTC
TTCTTCTTCTTTTCTTCTTCTTGTGTCTGTCGCTCGCAGCTCGCAGTTGAGCTGCCGGAG--ATGTCGTCCTCCTCCTTG
TCCAAGGCCAGATTCGAGGTCAGTAATCTCCTCTTCCCCCTCTCTCAAGTCAA--TTCCTCTACCCTACCCTACCTACTT
CATCATCTTCATCATCATCATCATCATCATCATCTCATATACACTAGAT--AGATAAGATGATAATTCACAGGGCAAGAC
CAGA-----AATCGAATCTGACATCAATTGCAACCTCAATTGTCTTGCTAATTATACATTACATACCATACATACATACA
TAC-TACTAGTAATTGCACTAAGTA-------------AAGAGGATGGGATGGATTACCTCTCCTCTCCTCACCTCAACA
ATTGCTAGGCCTAGTACCAGTACCAGGGGGTGCTGATTCTTTCCAAGCAAGCAGAGTAAAGCTTGCAATTGCACTTGAGC
TTCAACACCAGCCATGCCGTGTCCGTCTCATCTCATCCGCTCTCTTGTCTTCTCTTCTCTTGTCG----------TTGGC
GTGCGTGCAGGGTAAAGGAG------------GCGGAGCCGGGAGATCCATATCGCTGGCCGCCTCCAGGGCCAAGCT--
-------CGCCGCAGCCACCAAGAAAGCTACTACTACTAGTACAGCCGGAGGC---GGGCGGGGCAAGGGCAAGGC---G
GCCAAGAAGGTCTTCTCCCTCACCGGCCAGAAGTTCGAAACACCAGAGGAGGTC--TCTCTCAAATTC------------
--TTCTTTCATCATACTCC---TACTTGTAGTATGTATCT------------CATCTGATCTGCA-----------CAAG
A--AAATTCTCTACTGATTTGATTTCACTCGCAGAGGGAGCCCCTGAGGATCTTCTATCAATCGCTCTCCAACCAGATCC
CATCCAGCGACATGGCCGAATTCTGGTACCTAC----CCAC-CCCAC---------------CTCTGCTCCACCAATTGC
TCACCTGTTACTA--TACTAGTGCTTGCTTGACCACA-------------------------------------AGTTAC
TAGT-----GCTAGTCTGATCCATCCATCCATTGATTTCTCTTCTCTGAATGTCACTCAATCTAGATACGTCCATTTTCG
AGACAAGTAATTTCGAACGGAGGCACATC-----TACAGTTTGCGACCTAATTACACTA-GTAGTAGTATTCACAGACAA
CTTCACTCTCAAACTCTGAATTACACCTCCATAGTT---------------CACACACACTTGAAAAATGTATCCTCTTC
CAAATTTACTACTCCATCAATATTATACTGCTGCTGCAGACTTCCCTATACTGCTACTCCACCAATATTTTACTACAGCA
ACAACAGTCGGACCTCACCTCAAGGGGTTACACACAGAATCACCTACTAGTAG---TTTACTGCAGCAATATGTATGTTA
TACCACCACACCATTGCTCTGCA------------ATGTATGTATGTATGTATGTATGTATATATGTGTGTATGTAATAA
TACTTACCTGACAGACACAACACACACACACACACATCTTGCAGGCTAATGGAGCACGGCCTGTTATCTCCGGAGAGAGC
CAAGAAAGCCTACGACAGGAAGCTCAAACGGCAGCAGCAGATCAAATCAGGGATCCCCATCAAGTCGTCAAATTCCACCA
CTGTCAACAAGCACAATAACAACAATAA---------ACCTGCAGAGAGCTGGAAGAAACCTGTACCAGTGGTTTCTTCT
TCTTCCACAGCGCGTCACAACACAGATCATTCCGCCGGCAAGGCCAAGAGAAGAGTCGAGTACAGCAGCGACGACGACGA
CGACGACAAAGAATTCATTGTCAAGCTCAAGAGACCCAATTTCAACTCCAACTCCAATTCCACTTCCAGGGGTGGCTGAA
CTGCTCCTCAAC-TTGATGAATGGGCCTGTCTGTCTGTTTGTTTGTTTCTTTCCGGCT-AGCACATATCCTACTACATGG
ATCATCAAGCAATACCATCTCTGATTCAGATTCAGATCACTAACTCGACTTTTATTTATTT----TGTTTTTCACCCTAC
AAGTACAACAACGAATTGGCTCTTCTGTTCTGACTAC---ATATATATGTCTGTCTGTGTATTTGATTTCAGAGACAAGA
TAGACC-T---TACCTTTTTGTTGTAAGCAATGCCTATATTGTGAAAATAATGAATGAATGAATAAATGAACACACTCAG
T-----------------------CTGTTTCTTCCCGATGAGGAAGAGGAGTTTTTTTTTTTTGGATTGATAAAGAGCTT
TTTTTGTTAACTCACTCATAATGCAGCATCAAGCTGATAGA----------------ATGCAGCCCCTGCATGATTAGGA
TGCACACTAGCATAACC---TGATAAGAAATAAAAAGGAAATATAGGAAACAGTAAAGCCACATGAGGCCGAAACTATGC
CTATGTCGAAGAGGATGGTGGTCCTATTCAGAGAGTATGCCGCTATCCATGATGGATAAAGGACCCTAATAAGTGCCACA
CGTGTGGCACCAACACATGCCAACTCCAAAGTTTTTGATAGCAATTTTAGTGACGC--GAGGATGACAACTTTAGTTGTC
AAGCATCGCAATTTTTTTTTCAGATAGCAAGTTCCAGTTTTTCTA--GTTTGTTTTTTCTTTTCGAATGACAACTTTAGC
TGTAAAAAAACATCAGGACCGGAGTGAGGGAGTCCTGGACTAGGGGATCCTCGGGCTGCCGTTCTATCTTTTATGGGCCG
GACAGGTGGGCCGCTCTGTGATTATTATTGGAAGGCCGAGCTATAAGGCGACTCTGTGTTCACC---AAGGAAACCTCCA
AAGCCTTGGTGTGTCCTCCAACTCAAGATGGTAGAATCGGCAAGATTATTCCGTGATGGCAACCAACCATGTGTAACCCT
AGGTACCCCTGATGTCTATGT
>chr1D_46
---------------------------------------------TCCATCTCTTTTATTTCCATATTGAAAGTCGC---
CGTCTTCTTCTTCTTCTTC------TTCTTCATCGGACCGCCGGATCATACATACGCAAGGCCGGCCACATATATGATTT
GATGTCGCCTGTCATTTTTCTTCTTCAGTTTTTTTTTTGTCACGACAAGTACCTATCGATGGTGTATATATGAGC---TA
TATCATTTTTCTTCTTATGATGAACATAGGTTTTATTGACTTTTGACGTCCGCATCGAGGCCATGTAACCGTAAAGAATC
CACACTCAGCTAGCCTGTGCATAATGAGATGCGCACAACTCATATTGACTCACGCAAACATTTTGACCAACGGTTTGACA
AAATAAAGGAAAAGCCAGTTCAACAAGACA-----TGCCCGGTAAACAAATCCTCCTTGCTTCTATTTCTACTTTGTGCT
CCAGTGGATGTAATACTGGGAATCAACTACGTAG------TACAGAGCCAATATAAGTATGCACGTGTGTTTGATCTCTG
AGTCTCATGCATGATGACTTGTTGTGGCTGCATGC---------------------------------------------
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>chr1D_989
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------------------------------------------------GAGCTGCCGGAGCCATGTCGTCCTCCTCCTTC
TCCAAGGCCAGATTCGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCCTCTGCTCAACCCTACCTACTT
CTTCATCATCATCTCATAGACTCATACATAGATACTCCTCCTGCTAGATAAAGATAAGATGATAATTCACCAGACCAGAT
ATAGAATCCAATCGAATCTGACATCAATTGCAACCTCAATTGCCTTGCTAATAATACAC-------------TACATACA
TACATACTAGTAATTGCCCTGCAGCAGCAGCACTAAGTAAGAGGATGGGATGGATTACATCTCCTCTCCTCTCCTCACCT
AAACAAACAATTACAAGTGCTGAT--------------------------------------------------------
----------------------------------------------------TCTTCTCTTTTGATTTGCTTGGCTTGCC
GTGCGTGCAGGGTAAAGGAGTAGGAGGC---GGCGGAGCCGGGAGATCCATATCGCTGGCCGCCTCCAGGGCCAAGCTCG
CCGCGGCCACCGCCAGCGCCAAGAAAG---CAGCTGCTACTACAGCTAGCGGGCGGGGCAAGGGCAAGGGCAAGGC---C
GCCAAGAAGGTCTTCTCCCTCACCGGCCAGAAGTTCGATATCCCAGAGGAGGTGATTCCCTCAAATTC------------
--TTCTTTCAT----------------GTA-------TGCTTTCAGTTCAAGCATCTGATTTGGGAACCATTTTTGCAAT
C--AATTTCTCTTGGCTGGGCTG-------GCAGAGGGAGCCCCTTCGGATCTTCTACGAATCGCTCTCCAAGCAGATCC
CATCCAGCGACATGGCCGAATTCTGGTACCTACCAACCCCATCTCACCTCTGCTCTTCTCTGCTCTGCTCCACCAATTAA
TCACCACTTACTACTTACTAGTGCTTGCTTGCTTGTCCACAAGTCAAGTTATCCCCACCCAGTT------ACTCAGTTAC
TAGG-----ACTGTTCTCATCGATGCATCCATTGATTTC-----TCTGAATGTCACTCAAATCCTTAGCTAGCTTCCC--
--TCCCTCCCTGCA---------CACACC-----TA------GCTACCTAATTACACTA----GTGGTCTTCACAAACAA
CTTC--------ACTCTGAATTACCCCTCCCTCATT-------------CACACACACTTCA-AAAAATGTATCCTCTTC
CAAATTTACTACTCCA---------------------------------------------CCAATATTTTACTACAGCA
ACATCATTCAGGCCTGACCTCACGGACGGGCTTACAGAATCACCTACTACTAGTTTTTTACTGCAGCAA----TATGTTA
TACCACCACACCATTGCTCTGCA------------ATGTATGTATGTATGTATGTG-----------------------A
TACTTATCTGACAGACACGACATACATAAAACCTCTTC--GCAGGTTAATGGAGCATGGGCTGTTATCTCCGGAGAGAGC
CAAGAAAGCCTATGACAGAAAGCTCAAACGGCAGCAGCAGATCAAATCAGGGACCCCGATCAAGTCGTCAAATTCCAACA
CTGTCAGCAAACAC---AACAACAACAA---------ACCTGCAGAGACCTGGAAGAAACCGGCACCAGTGGTTTCTTCT
TCTTCCACAGCGCGTCACAACACGGATCATACCGCCGCCAAGGCCAAGAGAAGAGTCGAGTACAGCAGCGA------CGA
CGACGACAAAGAATTCATTGTCAAGCTCAAGAGACCCAATTTCAACTCCAACTCCAACTCCAGTTCCAGGGGTGGCTGAA
CTGCTCCTCAAC-TTGATGAATGGGCCTGTCTGTCTGTCTGTTTGTTTCTTTCCAGCT-AGCACATATCCTACTACATGG
ATCA---AGCAATACCGTCTCAGATTCAGATTCAGATCACTAACTCGACTTTTTTATATTTATTTTGTTTTTCACCCTAC
AAGTACAACAATGAATTGGCTCTTCTGACTACATACATATATATATATGTCTGTCTGTGTATTTCAGTTCAGAGAGAAGA
TATACCAT---TACATTTTTGTTGTAAGCAATGCCCGGTGAAAAT--------AATGAGTGAATAAATGAACACACTCAG
TAAGTTCGTCTGC--ATATTGTGTCTGTTTGTTCCCGATGAGGAAGAGGGAGTC-------------------------T
TTTTTGTTAACTCACTCATAATGCAGCATCAAGCTGATAGA----------------ATGCGGCCTCTGCATGATTAGGA
TGCGCACTAGCATAACCTGATGATAAGAAATAAAAAGGACATATAGGAAACAGTAGAGCCACATGAGACCGAAACTATGC
CTATATTGAAA------------CTATTCAGAGAGTATGCCGCTATCCATGATGGACAAAGGACCCTGATAAGTGCCACA
CGTGTGGCACCAACACATGCCAATTCCAAAGTTTTTGATAGCAAATTTAGTGACGCGAGAGGATGACAACTTTAGTTGTC
AAGCATGGCGATTTTCTTTCCAGATAGCAAGTTCCAGTTTTTTTTTTGTTTGTTTTTTCTTTTCGGATGACAACTTTAGC
TGTAAAAAACG-TCAGGACCGGAGTGAGGGAGTCCTGAACTAGGGGATCCTCGGGTTGCCGTTCTATCTTTTATGGGCCG
GACAGGTGGGCCGCTCTGTGATTATTATTGGAAGGCCGAGCTATAAGGTGACTCTGTGTAGTTCAGGAAGGAAACCTCCA
AAGCCTTGGTGTGTCCTCCAAGTCAAGATGGTAGAATCGGCACGATTATTCCGTGATGGCAACCGACCATGTGTAACCCT
AGGTACCCCTGGTGTCTAT--
>chr1A_1181
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-----------TCGAATCTGACATCAATTGCAACCTCAATTGC-----TAATAATACAC-------------TACATACA
TAC-GACAAGTAATTGCTCTCT----------------------------------------------------------
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----------------------------------------TCTCTTCTCTTCTCTTCTCTTTTGATTTGC---------C
GTGCGTGCAGGGTAAAGGAGGAGGAGGAGCAGGCGGATCCGGGAGATCCATATCGCTGGCCGCCTCCAGGGCCAAGCTCG
CCGCCGCCACCGCCGCCGCCAAGAAAGCCGCTACTACAGCTA---------GC---GGCCGGGGCAAGGCCAAGGCCAAG
GCCAAGAAGGTCTTCTCCCTCACCGGCCAGAAGTTCGACACCCCAGAGGAGGTA-------CAATTTC------------
--TTCTTTCATCATACTTATCATACTTGTA-------TGCTTCCAGTTCAAGCATCTGATTTGGGAACCCTTTTTTGCAA
TGGAATTTGGCTTTGCTTGGCTG-------CCAGAGGGAGCCCCTGAGGATCTTCTACGAATCGCTCTCCAAGCAGATCC
CATCCAGCGACATGGCCGAATTCTGGTACGTCTCTG----------CCTCTGCTCTCCTCTGCTCTGCTCCACCAATTAA
TCGCCACTTACTGC---------------TGCTTGCCCACAAGTTACTAGTAGAGTAGGCTGCAATCCCAACCCAGTTAC
TAGTAGAGTACTAGTCTCTGATTG--ATCCATTGATTTC-----TCTGAATGTCACTCAAATCCTTCCTTAGCT------
CTTCCCTCCCTGCA---------CACATCACGTATA------GCTACCTAATTACTACA----CTAGCATTCACAAACAA
CTTCACTCTCAAACTCTCAATTATCCCTCCCTGATGATTCACACACACACACACACACACTTCAAAAATGTACCCTCTTC
CAAATTTACTACG----------TATACTGCTG---CCGAGTACTACTACTCC--ACTCCACCAATATTTTACTAAAGCA
ACAACAGTCACACCTG-----------------------------------------------------TATGTATGT--
-----------------------ATGTATGTATGTATGTATGTATGTATGTATGTG-----------------------A
TTCTTACCTGACAGACACAACATACACACATA------TTGCAGGTTAATGGAGCATGGGCTGTTATCTCCGGAGAGAGC
CAAGAAAGCCTATGACAGAAAGCTCAAACGGCAGCAGCAGATCAAATCAGGGACCCCCATCAAGTCGCCAAATTCCACCA
CTGTCACCAAAC------------ACAA---------ACCTGCAGAGAGCTGGAAGAAACCGGTACCACTGGTTTCTTCT
TCTTCCACAGCGCGTCACAACACAGATCATTCCGCCGCCAAGGCCAAGAGAAGAGTTGAGTACAGCAGCGACGATGACCA
CGACGACAAAGAATTCGTTGTCAAGCTCAAGAGACCCAATTTCAACTCCAACTCCAATTCCAATTCCAGGGGTGGCTGAA
CAACTCCTCAACATTGATGAATGGGCC----CGTCTGTCTGTTTGTTTCTTTCCAGCTAAGCACATATCCTACTACATGG
ATCA---AGCAATACCATCTCAGATTCAGACTCAGATCACTAACTCGACTTT----TATTTATTTTGTTTTTCACCCTAC
AAGTACAACAATGAATTGGCTCTTCTGACTACATACATATATATGC----CTGTCTGTGTATTTGAGTTCAGAGACAAGA
TAGACATTTACTACCTTTTTGTTGTAAGCAATGCCTGGTGAAAAT--------AATGAATGAATAAATGAACACATTCAG
TAAGTTCGTATGTGTATATTGTGTCTGTTTGTTCCCGTTGACGAAGAGGGAGTTTTTTTTTGG---TTGATAAAGGGCG-
TTTTTGTTAACTCTCTCATAATGTAGCACCAACCTGATAGAAAGCATAACGAGTGACATGCGGCCTCTGCATGATTACGA
TGCGCACAAGCATAACC---TGATAAGAAATAAAAAAGACATATAGAAAACAATAAAGCCCTATGAGACCGAAACTATGC
CTATGTCGAAGAGGATAGTGG-----------------------------------------------------------
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>chr1B_1543
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------------------CCAAGAAAG---CTGCTACTAGTACAGCTGGAGGC---AGCCGGGGCAAGGGTAAGGC---G
GCCAAGAAGATCTTCTCCCTCACCGGCCAGAAGTTCGAAACCCCAGAGGAGGTA-------CTCTACTAATTCCCTCACA
AATTCTTTCATCATACTCC---TACTTGTA-------TCT------------CATCTGATCTGCA-----------CAAG
A--AAATTCTCTACTGATTTGATTTCACTCGCACAGGGAGCCCCTGAGGATCTTCTATGAATCGCTCTCCAACCAGATCC
CATCCAGCGACATGGCCGAATTCTAGTACCCAC----CCTACCCCACCTCTGCTCTTCTCTGCTCTCATCCACATATTAA
TCGCTTGTTACTG--TACTAGTGCTTGCTTGCTTGTCCACATGTTAAGTTA-----AGGCTGCAATCCCCTCCCAGTTAC
TAGG-----ACTAGTCTGATCGATCCATCCGTTGATTTC-----TTTGAATGTCACTCAAATCCTTAGCTAGCCAGCTAG
CTTCCCTCCCTGCA---------CACATC-----TA------CCTACCTAATAACACTA-CTAGTAGTATTCACAAACAA
CTTCACTCTCAAACTCTGAATTACCCCTCCCTCATT-------------CACACACACACTTGAAAAATGTATCCTCTTC
CAAATTTACTACTAG-----TATTATACTACTG---CAAACTTCTCTGTACCACTACTCCACCAATATTTTACTACAGCA
ACTACAGTCAGACCTCACCTCAAGGGGTTACACACAGA------------------------------------------
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>chr7B_1543
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------------------CCAAGAAAG---CTACTACTAGTATAGCCGGAGGC---GGCCGGGGCAAGGGCAAGGC---G
GCCAAGAAGGTCTTCTCCCTCACCGACCAGAAGTTTGAAACCCCAGAGGAGGTA-------CTCTACTAATTCCCTCTCA
AATTCTTTCATCATACTCC---TACTTGTA-------TCT------------CATCTGATCTGCA-----------CAAC
A--AAATTCTCTACTGATTTGATTTCACTCGCAGAGGGAGCCCCTAAGGATCTTCTATGAATCGCTCTCCAACCAGATCC
CATCCAGCGACATGGCCGAATTCTGGTACCCAC----CCCA-CCCACCTCTGCTCTGCTCTGCTCTCATCCACATATTAA
TCGCCTGTTACTA--TACTAGTGCTTGCTTGCTTGTCCACATGTTAAGTTA-----AGGCTGCAATCCCCACCCAGTTAC
TAGG-----ACTAGTCTGATCGATCCATCCATTGATTTC-----TCTGAATGTCACTCAAATCCTTAGCTAGCCAGCTAG
CTTCCCTCCCTGCA---------CACATC-----TA------CCTACCTAATAACACTA-CTAGTAGTATTCACAAACAA
CTTCACTCTCAAACTCTGAATTACCCCTCCCTCATT-------------CACACACACACTTGAAAAATGTATCCTCTTC
CAAATTTACTACTAG-----TATTATACTGCTG---CAGACTTCTCTGTACCACTACTCCACCAATATTTTACTACAGCA
ACAAAAGTCAGACCTCACCTCAAGGGGTTACACACAGA------------------------------------------
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>chr7B_1543
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------------------CCAAGAAAG---CTACTACTAGTATAGCCGGAGGC---GGCCGGGGCAAGGGCAAGGC---G
GCCAAGAAGGTCTTCTCCCTCATCGGCCAGAAGTTCGAAACCCCAGAGGAGGTA-------CTCTACTAATTCCCTATCA
AATTCTTTCATCATACTCC---TACTTGTA-------TCT------------CATCTCATCTGCA-----------CAAG
A--AAATTCTCTACTGATTTGATTTCACTCGCAGAGGGAGCCCCTGAGGATCTTGTATGAATCACTCTCCAACCAGATCC
CATCCAGCGACATGGCCGAATTCTGGTACCCAC----CCCACCCCACCTCTGCTCTGCTCTGCTCTCATCCACATATTAA
TCGCCTGTTACTA--TACTAGTGCTTGCTTGCTTGTCCACATGTTAAGTTA-----AGGCTGTAATCCCCACCCAGTTAC
TAGG-----ACTAGTCTGATCGATCCATCCATTGATTTC-----TCTGAATGTCACTCAAATCCTTAGCTAGCCAGCTAG
TTTCCCTCCCTGCA---------CACATC-----TA------CCTACCTAATAACACTA-CTAGTAGTATTCACAAACAA
CTTCACTCTCAAAATCTGAATTACCCCTCCCTCATT-----------CACACACACACTTG---AAAATGTATCCTCTTC
CAAATTTACTACTAG-----TATTATACTGCTA---CAGACTTCTCTGTACCACTACTCCACCAATATTTTACTACAGCA
ACAACAGTCAGACCTTACCTCAAGGGGTTACACAGAGA------------------------------------------
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>chr7B_1543
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------------------CCAAGAAAG---CTACTACTAGTACAGCCGGAGGC---GGCCAGGGCAAGGGCAAGGC---G
GCCAAGAAGGTCTTCTCCCTCACCGGCCAGAAGTTCGAAACCCCAGAGGAGGTA-------CTCTACTAATTCCCTCTCA
AATTCTTTCATCATACTCC---TACTTGTA-------TCT------------CATCTGATCTGCA-----------CAAG
A--AAATTCTCTACTGATTTGATTTCACTTGCAGAGGGAGCCCCTGAGGATCTTCTATGAATCGCTCTCCAACCAGATCC
CATCCAGCGACATGGCCGAATTCTGGTACCCAC----CCCACCCCACCTCTGCTCTGCTCTGCTCTCATCCACATATTAA
TCGCCTGTTACTA--TACTAGTGCTTGCTTGCTTGTCCACATGTTAAGTTA-----AGGCTGCAATCCCCACCCAGTTAC
TAGG-----ACTACTCTGATCGATCCATCCATTGATTTC-----TCTGAATGTCACTCAAATCCTTAGCTAGCCAGCTAG
CTTCCCTCCCTGCA---------CACATC-----TA------CCTACCTAATAACACTA-CTAGTAGTATTCACAAACAA
CTTCACTCTCAAACTCTGAATTACCCCTCCCTCATT-----------CACACACACACACTTGAAAAATGTATCCTCTTC
CAAATTTACTACTAG-----TATTATACTGCTG---C-------------------------------------------
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>chr5B_1543
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------------------CCAAGAAAG---CTACTACTAGTACAGCCGGAGGC---GGCCGGGGCAAGGGCAAGGC---G
GCCAAGAAGGTCTTCTCCCTCACCGGCCAATAGTTCGAAACCCCAGAGGAGGTA-------CTCTACTAATTCCCTCTCA
AATTGTTTCATCATACTCC---TACTTGTA-------TCT------------CATCTGATCTGCA-----------CAAG
A--AAATTCTCTACTGATTTGATTTCACTCGCAGAGGGAGCCCCTGAGGATCTTCTATGAATCGCTCTCCAACCAGATCC
CATCCAGCGACATGGCTGAATTCTGGTACCCAC----CCCACCCCACCTCTGCTCTGCTCTTCCCTCATCCACATATTAA
TCGCCTGTTACTA--TACTAGTGCTTGCTTGCTTGTCCACATGTTAAGTTA-----AGGCTGCAATCCCCACCCAGTTAC
TAGG-----ACTACTCTGATCGATCCATCCATTGATTTC-----TCTGAATGCCACTCAAATCCTTAGCTAGCCAGCTAG
CTTCCCTCCCTGCA---------CACATC-----TA------CCTACCTAATAACACTA-CTAGTAGTATTCACAAACAA
CTTAACTCTCAAACTCTGAATTACCCCTCCCTCATT-----------CACACACA--CACTTGAAAAATGTATCCTCTTC
CAAATTTACTACTAG-----TATTATACTGCTG---CAGACTTCTCTGTACCACTACTCCACCAATATTTTACTACAGCA
ACAACAGTCAGACCTCACCTCAAGGGGTTACACACAGA------------------------------------------
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>chr6B_1698
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--------------------------------------CT------------CATCTGATCTGCA-----------CAAG
A--AAATTCTCTACTGATTTGATTTCACTCGCAGAGGGAGCCCCTGAGGATCTTCTATGAATCGCTCTCCAACCAGATCC
CATCCAGCGAGATGGCCGAATTCTGGTACCCAC----CCCACCCCACCTCTGCTCTGCTCTGCTCTCATCCACATATTAA
TCGCCTGTTACTA--TACTAGTGCTTGCTTGCTTGTCCACATGTTAAGTTA-----AGGCTGCAATCCCCACCCAGTTAC
TAGG-----ACTAGTCTGATCGATCCATCCATTGATTTC-----TCTGAATGTCACTCAAATCCTTAGCTAGCCAGCTAG
CTTCCCTCCCTGCA---------CACATC-----TA------CCTACCTAATAACACTA-CTAGTAGTATTCACAAACAA
GTTCACTCTCAAACTTTGAATTACCCCTCCCTCATT-------------CACACACACACTTGAAAAATGTATCCTCTTC
CAAATTTACTACTAG-----TATTATACTGCTG---CAGACTTCTCTGTACCACTACTCTACCAATATTTTACTACAACA
ACAACAGTCAGACCTCACCTCAAGGGGTTACACACAGA------------------------------------------
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>chr6A_2012
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----------------------------------------------CCTAATTACACTAGCTAGTAGTATTCACAAACAA
CTTCACTCTCAAACTCTGAATTACCACTCCCTCGTTG---------------ACACACACTTCAAAAATGTATCCCGTTC
CAAATTAACTACG----------TATACTGCTG---CTAAGGACTAC-----------------------TACTACAGCA
ACAACATTCAGGCCTGAC-----GGACGGGGTTATAGAATCACCTACTAG------TTTACTGCAGCAA----TATGTTA
TACCACCACACCATTGCACTGCAATGTATGTATGTATGTATGTATGTATGTATGTG-----------------------A
TACTTACCTGACAGACACGACATACATACAACCTTTTC--GCAGGTTAATGGAGCATGGGCTGTTATCTCCGGAGAGAGC
CAAGAATGCCTACGACAGGAAGCTCAAACGGCAGCAGCATATCAAATCAGGGACCCTGATCAAGTCGTCAAATTCCAACA
CTGTCAGCAAAC------------ACAATAACAACAAACCTGCAGAGACCTGGAAGAAACCGGCACCAGTGGTTTCTTCT
TCTTCCACAGCGCGTCACAACGCGGATCATTCCGCCGGCAAGGCGAAGAGAAGAGTCGAGTACAGCAGCGACGACGAC--
-GACGACAAAGAATTCATTGTCAAGCTCGAGAGACCCAATTT------CAACTCCAATTCCAGTTCCAGGGGTGGCTGAA
CTGCTCCTCAAC-TTGATGAATGGGCT----TGTCTGTCTGTTTGTTTCTTTCCAGCT-AGCACATATCCTACTACATGG
ATCA---AGCAATACCGTCTCA--TTCAGGTTCAGATCACTAACTCGACTTT-TTATATTTATTTTGTTTTTCACCCTAC
AA------CAATGAATTGGCTCTTCTGACTGCATATATATTTATTTAT--------------------------------
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------------------------------------------------TTTGTTTTTCACCCTACAA-------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S-S--S--------SSSS
-------------------SSSSSS-------S----------------------------S------------------
-----------------------S---S--------S-----S-----------------S-SSSS-S-------SSS--
----------------S----S------------------------------------S-----------S--S-S---S
------------S------------------S-----------------S------------------------------
----S-------------------------SSSSS-------------------------------------S-------
----S------------------S------S---SSSSSS------------S-------S-----------------S-
---------S------------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------S
---------------------SS-SSSSSS----SS-S-SSSSSSSSSS--SS---------S-S-S-------------
-S-----S-----SSSSSS-SSSSS-SSSSS--SSSSSSSSSS---------------------------SS-S-S---S
SSSS--------------------------------------S---------S-----SSSSSSSSSSSSSS--------
-----------------S--SSSSS---------------------------------S------------S-----S-S
-SSSSS-SSSS--SS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--------------S-SS-------------S-
--------------------------------------------------------------------------------
--------S----S---S----------SS----------------------------S---------------------
-----------------------------------------S-----------S----S---------------------
------------------------------SSSSSSS-------------------------------------------
----------------------------------------------------------S---------------------
---------------------------------------SS-------------------------------------SS
-------------------------------SSSS-S-------------------------------------------
---------S-----------S-----------------SSSSS----------------SSSSSSSS-SSS-S-SS-S-
SSS-SSSSSS-SSSSSSSSSSSS-------------SSSSSS--S---------------S--------------S----
------------------------S-----S-S-----------------------------------------------
----------------SSSS-------------SSS--------S--S---SS---------------------------
---------S----------------------------------------------------------------------
-------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS-
----------------------S-------S--S-S---------S----------S--S--------------------
-----------------------------------------------------S--------------------------
------S---S---SSS--------S-----------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------S---------------S-------------------------
----SSS--------------S-------------------------------S-S------------------------
-----------S---------------SSSSS-SSSS-----------------------------S-------------
------------------------------------SSSSSSSSSSSSSSSSS---------------------------
------------------------------S------------------SSS---------SSSSS---------S--S-
-------------------------------------------------------------S---S--------------
---S-----------------------------------S---------------------------S------------
----------------S----SS---------------------------------S----------S------------
-----------------------S--------------------S-----------------------------------
------S--S-----S---S----------------------S-S-----------------------------------
---------SSS-------------------------S-----------------S------------------------
------------------------------------------------S----------SSSS-----------------
---------------------S--------------------S---------------------S---------------
-----------S-------SS
>forward_23
---CCCTTCATCCACCAGTGCAT---------------------------------------------------------
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>reverse_1463
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----------------------CCGTCTCATCTCATCCGCTC--------------------------------------
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>forward_1405
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-------------------------GGGGGTGCTGATTCTTTCCA-----------------------------------
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>reverse_2606
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---------------------------------------------CTAATGGAGCACGGCCTGTT---------------
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>forward_1454
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--------------------------------------------------------------------------TTGAGC
TTCAACACCAGCCA------------------------------------------------------------------
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>reverse_3422
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-------------------------------------------------------------AGCCCCTGCATGATTAGGA
TG------------------------------------------------------------------------------
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---------------------
