>input_sequence_44599
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ATGTCTGGACGTGAGGTTCGTGAGTACACTAAC
CTCAGCGACCCTAAAGGTTAGTGATTTCATCATTCTCCAGTCCCAGTGTGGACAAGTGGTTCTTCTCCTTTTTGGTTTAT
TGGACATTTTCTTAAATCAAATCATCACCTTTGGGGTTATGCATATGCAGATAGAAAGTATGGGAAGGGGAAGGACAAGA
TCGACGATGAGGATGTCACCTTCCAGCGCATGGTAGCAAAGGTTAACCGGAATGCTCTTGCAAAAATAATTCTGATTAAA
TTGTGAATAAATTGAGTTATAATTACTTAGTAGCATTGTCCTGGTAGGTATCTTATTTTTAGGAAA-TTAGTTTAGCTAT
CAAAATCTAAGTTACATTATCGATTCTCACATTCGAATATTGGATAC--------TTTGAAATGAGGGTCATGGAAAGAA
AGAGGTCTGTTT--GAGTTTTGACATGGTATTGTGCTT-GTACAGATATAGATAAGTGCAGAAGGCCTTTGATATGTTTG
TACCAATGAGCTTAAATTCAGGGAATTTACTTTGGATTGTGAGAAATCATTCAACGTGATCAGGAAAAAGATCAAGGCTG
TCTTAGGTTTAGGTAGCATACATTATCTCCTCTTATCAGTGTTGTGTTCGGGACAGCATTTAACTTGCTGGCAGTTGTGG
GCTTGTGGCCATGAGATTACTCGCTCTTCTTGAAAAATTGATCCCATTACTCAGTATGCCTGCAATAGGCATTGATTTAC
GATGTTCTGATAACATGCCCTGACAGGGATTTTGGCTTTCTACTGGGCGGTTGATGCCAACAGATGCAGGATGTTGCTGG
TGAGCGGGGAGGCTACCTTCATGGGCGAGGAGGTATTCCATGCTTCTTTAATGAAGAATTCATGCTGGCTCCTTGTTAAC
CTTGTTTACTTCGATGTTGTTCAGCATTGGACAGTGATGATTTGCTTTACCTTAAAGAGCAAATGGAGGCTGAGGAAGAT
GCAGAGCGTCTCCTCCGTCGTACAGAGAAGCGGGCATTTGCTGCCTTTAAGATATCCTCTCTTGCATGA---TACATTAT
AGCATCTCCCACACCTTTTACAAGATAATATTTAGTATAACCCAAGCGTTCTTGCTATGCATGCATGCTATTTTCCACAT
CTATTATTTGATTTTCTTGTCATTGGTCATGCAGTTGCAGCACAATATTCACATGCCTAGGGGTAGTTTCACATCTTATC
GCAGCTTGCAGCGTTCCACATTTCGATAACTCTGTCAGTTTGTTTGTTTGATTTCTTTAACTCTGGCATTACCAAGCAGC
AGTTCTAGCTGATTCTGCACCTCCTATTCCCGCGGCTCTTCGGGTCGAGCCTAGACCCAAAAGTGATATAAGGTAAGCCG
TGCGCGAC-AAAGACTCTGTTTCCATCAATGATACTTTTGCCTTCTGATTTGGCACATACCTTGTTATGGGCAGGCAACG
TGATCTCTTGAAGAAGATTGTCGAGATCAAACCAAAGCGAGCAAAAGTCAGCAGCCCTCGACAAACAGCAGAGGGTGATA
GACCTAAGCAGGAACAAGAAGATTCTATGAGGAAAATGTCTACGCATGAAGGTGAAAATGAACTGTCTCAAGGGTCTGTC
ATCTTTGTGCAACCTCTGTCAAAACCAGGTGATCCAGCGGAGGCCAAGTCGCAGAATGCAGCTGTAAGCTTACTTGGTTT
AGCGTATGAGAGTTCGGACGAGGAATAG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr2A_1_TraesCS2A01G167000
TTAAGGGTACCCTCCCCAAACCCCAAGCCTCACATCAAGTCTGCCTCTGCATGACTGCTTC-AATTTGGGGATTCCTTCA
TCAACCTTGATGCTGATTTTGCTGCAGCAC----TATCTCCTGTTTGCACCTTGCATTGCATCTGTCATGTCAGCCACAC
CTGAAACTGCATCTTGATCACATGTCCCAGGCTCGCCCACAGCTGCAACAAAT-TCCTCAAACACTTGCATATATTATCT
CCTGCCAAATTATTCTGCTTTTTATGAGCTGAAATCACTGTATCAGGAGTGAATATTGGATCCATCTCCTATGCTCATTT
GCTATGTTTTTAAGGCGACGCCTTACCGCCTTAGGGAGGGGGGGGCGCTTTGGCGCCTAGGCGACGCCTAGGCGGGCGCT
TTGGACGCCTAGGCGCCCAAAGCGGTCGATTTTCCAAAGCGGAGGGGGAGCGCTTCGACGCCTAGGCGTCGCCTAGGCGT
CGCCTTAGGGACGCTTTAAAAACATAGCTCATTTGAATGTGCTTTACTGTAAGAGCTCAGAGAATGAGCATAGGAGATGG
ATCCAATACTGGATACTGGGTCCATCTTAAATAGTTGTTAGAAATTATCTGTCACGTGTCCAGATTGCAAATGTTGTACA
GTATAGCACATTCAATTGCCATGTAGTGAGATGTCAAGTTGTCTTGTAGAAAAAGTACTTTCTGACAACAAAGTCACATG
ATTGCTAAT-TTAGAAACTGCCGGCCATGGCAAGTTAACACCATTTGTGTTTGGACGGTAGTTTGAGACGGTAAGAGCTC
AACTACCAATTCATTTCTTGAGTGAAACTACCAATTGGTTGACCCAGTTGAGTCATACTATTTCTCTTTGAAGGGTTCTT
TATTGTTTTTCCTATATGAATTATTGTTTTTTCAAAAAACTCTGTTCAAACTTTTACACTTCTCGGTTCGAAAAATCGTA
CCTAATGTTGGATCTGAATATAAATAGGGCCAGCCGAGCTCTCACACATGTCTGGACGTGAGGTTCGTGAGTACACTAAC
CTCAGCGACCCTAAAGGTTAGTGATTTCATCATTCTCCAGTCCCAGTGTGGACAAGTGGTTCTTCTCCTTTTTGGTTTAT
TGGACATTTTCTTAAATCAAATCATCACCTTTGGGGTTATGCATATGCAGATAGAAAGTATGGGAAGGGGAAGGACAAGA
TCGACGATGAGGATGTCACCTTCCAGCGCATGGTAGCAAAGGTTAACCGGAATGCTCTTGCAAAAATAATTCTGATTAAA
TTGTGAATAAATTGAGTTATAATTACTTAGTAGCATTGTCCTGGTAGGTATCTTATTTTTAGGAAA-TTAGTTTAGCTAT
CAAAATCTAAGTTACATTATCGATTCTCACATTCGAATATTGGATAC--------TTTGAAATGAGGGTCATGGAAAGAA
AGAGGTCTGTTT--GAGTTTTGACATGGTATTGTGCTT-GTACAGATATAGATAAGTGCAGAAGGCCTTTGATATGTTTG
TACCAATGAGCTTAAATTCAGGGAATTTACTTTGGATTGTGAGAAATCATTCAACGTGATCAGGAAAAAGATCAAGGCTG
TCTTAGGTTTAGGTAGCATACATTATCTCCTCTTATCAGTGTTGTGTTCGGGACAGCATTTAACTTGCTGGCAGTTGTGG
GCTTGTGGCCATGAGATTACTCGCTCTTCTTGAAAAATTGATCCCATTACTCAGTATGCCTGCAATAGGCATTGATTTAC
GATGTTCTGATAACATGCCCTGACAGGGATTTTGGCTTTCTACTGGGCGGTTGATGCCAACAGATGCAGGATGTTGCTGG
TGAGCGGGGAGGCTACCTTCATGGGCGAGGAGGTATTCCATGCTTCTTTAATGAAGAATTCATGCTGGCTCCTTGTTAAC
CTTGTTTACTTCGATGTTGTTCAGCATTGGACAGTGATGATTTGCTTTACCTTAAAGAGCAAATGGAGGCTGAGGAAGAT
GCAGAGCGTCTCCTCCGTCGTACAGAGAAGCGGGCATTTGCTGCCTTTAAGATATCCTCTCTTGCATGA---TACATTAT
AGCATCTCCCACACCTTTTACAAGATAATATTTAGTATAACCCAAGCGTTCTTGCTATGCATGCATGCTATTTTCCACAT
CTATTATTTGATTTTCTTGTCATTGGTCATGCAGTTGCAGCACAATATTCACATGCCTAGGGGTAGTTTCACATCTTATC
GCAGCTTGCAGCGTTCCACATTTCGATAACTCTGTCAGTTTGTTTGTTTGATTTCTTTAACTCTGGCATTACCAAGCAGC
AGTTCTAGCTGATTCTGCACCTCCTATTCCCGCGGCTCTTCGGGTCGAGCCTAGACCCAAAAGTGATATAAGGTAAGCCG
TGCGCGAC-AAAGACTCTGTTTCCATCAATGATACTTTTGCCTTCTGATTTGGCACATACCTTGTTATGGGCAGGCAACG
TGATCTCTTGAAGAAGATTGTCGAGATCAAACCAAAGCGAGCAAAAGTCAGCAGCCCTCGACAAACAGCAGAGGGTGATA
GACCTAAGCAGGAACAAGAAGATTCTATGAGGAAAATGTCTACGCATGAAGGTGAAAATGAACTGTCTCAAGGGTCTGTC
ATCTTTGTGCAACCTCTGTCAAAACCAGGTGATCCAGCGGAGGCCAAGTCGCAGAATGCAGCTGTAAGCTTACTTGGTTT
AGCGTATGAGAGTTCGGACGAGGAATAGTTTGTGGCGTGAAGAAATTGTTGTAGACTCCGTGTTGAAGTTTTTCT-GTTC
TCTTGCTAGACTGTGTTGTATCATCAGAAGGATAAAGAACTTATGCCGGCACTGATTAGGTGTCACTGCTGGAAATCAAG
CCTGAGTTACTTATTGGGTAGACTATATTCTTGCAGAACTATATATGTGATTGCTAATGCTAATGTATATAGGCCCTGTT
TGGATACTTTAACTTAGCTAGAGGTTAGAGTTTGTTTCTAGCTCATGACTAACCCTGAACTAATTCTAGCCAAAGAGGTG
TTTGGACGATAGGGTTAGATTGACAATAAATGCACAGGAGAACAAGCTCCTATTAGCACCTCTTGGGTGGGATAGTTTTT
TTTTGGATGGGTTAGATGCAACTAGCTCAAACTATCCCTCATGTTTGGATACTTTAGGGCTAGTTGAGCCCAAACTAGCT
CTAACCCATTGATCCAAACATGGCCATAAAAGTAAGTGAAATCTCAAATAATAGAAAAACTAAATTTACTAGCTCCTTTA
TTTAAGAAAAAATATATTCACCGTAGCAAATGGTATCAAGTTGAAGAGGCTTTATAAACTCGTTATCTACTTGAATGGTC
AGGAACATTTGGGTTCACTAAACTCGGTGCTTTTATCTCCATTACTGTACTATACTATTAATATACAGTTTATACCACAT
GCCCATACTAATAATACTAATAAAAGCATGAGTCCTGAAACTAATCAAACTTGTGCAGGTGTATTTGTTCGGGTGTCACA
TTGATTGATACTATGGAGAAGATTTCTACTAAAGACTTGAATCTAATTTTTAGTTTCAGAATTTATCTT-GTACTCCGTT
CACTATTATAAAATGTTCTGACTTTTTTCTAAATTGGATGTATGTAGACATGTTTTTGTGTGTTTGTTTACTTATTTCAC
TTTGTGTCTAGTCCATATTGAAATATCCAAAACATCTTACAATAGTGAATGGAGGGAGTATTTCTTATTT
>chr2B_14
-------------CCCCAAACCCCAAGCCTCACATCAAGTCTGCCTCTGGGTGACTGCTTCAAATTTGGGGATTCCTTCA
CCAACCTTGATGCTGATTTTGCTGCATCACTAATTATGTCCTGTTTGCACCTTGCATTGCATCTGTCTTATCAGCCACAC
CTGAAACTGCATCTTGATCACATGCCCCAGGCTCGCCCACAGCTGCAACAAACATCCTCAAACACTTGCATACATCATCT
CCTGCCAAATTATTCTGCTTTTTATGAGCTAAAATCACTGTACCAGGAGTG--TATTGGATCCATCTCCTATGCTCATTT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AATGTCCTTTACTGTAAGAGCTCAGAGAATGAGCATAGGAGATGG
ATCCAATACTGGATACTGGGTCCATCATAAATAGTTGTTAG-AATTATCTGTCACATGTCCAGATTGCAAATGTTGTACA
GTATAGCACATTCAGTTGCCATGTATTGAGATGTCAAGTTGTCTTATAGAAAAAGTACTTTCTGACAACAAAGTCACAGG
ATTGCTAAAGTTAGAAACTGCCAGCCATGACAAGTTAACACCATTTGTGTTTGGACGGTAGTTTGAGACAGTAAGAGCTC
AACTACCAATTCATTGCTTGAGTGAAATTGCCAATTGGTTGACTCAGTTGAGTCATACCATTTCTCTTTGAAAGGTTCTT
TATTGTTTTTCCTATACCAATTATTGTTTTTTCAAAAAACTCTGTTCAAACTTTTACCCTTCTCGGTTCGAAAAATTGTA
CCTAATGTTGGATCTGAATATAAATAGGGCTACCTGAGCTCTCAGACATGTCTGGACGTGAGGTTCGTGAGTACACTAAC
CTCAGCGACCCTAAAGGTTAGTGATTTCATCATTCTCCAGTCCCAGTGTGGACAAGTGGTTCTTCTCCTTTTTGGTTTAT
TGGACATTTTCCTAAATCAAATCATCACCTTTGTGCTTATGCATATGCAGATAGAAAGTATGGGAAGGGAAAGGACAAGA
TCGACGATGAGGATGTCACCTTCCAGCGCATGGTAGCAAAGGTTAACCGGAATGCTCTTGCAAAAATAATTCTGATTAAA
TTCTGAATAAATTGAGTTATAATTACTTAGTAGCACTGTCCTGGTAGGTATCTTATTTTTTGGGAAATTAGTTTAGCTGC
CAAAATCTAAGTTACATTATCGATTCTCACAT-CGAATATTGGATAGTTTTGATATTTGAAATGAGGGTCATGGAAAGAA
AGTGGTCTGTTTTTGAGTTTTGACACGGTATTGTGCTGGGTACAGATATAGATAAGTGCAGAAGGCCTTTGATATGTTTG
TACCAATGAGCTTAAATTCAGGGAGTTTACTTTAGATTGTGAGAAATCATTCGATGTGATCAGGAAAAAGATCAAGGCTG
TGTTAGGTTTAGGTAGCATACATTATCTGCTCTGATCAGTGTTGTGTTCGGAACAGTATCTAACTTGCTGTCAGTTGTGG
GCTTGTGGCCATGAGATTACTCGCTCTTCTTGAAAAATTGATCCCATTACTCAGTGTGTCTGCAATAGGCATTGATTTAC
GATGTTCTGATAACATGCCCTGACAGGGATTTTGGCTTTCTACTGGGCGGTTGATGCCAACAGATGCAGGATGTTGCTGG
TGAGCGGGGAGGCTACCTTCATGGGCGAGGAGGTATTTCATGCGTCTTTAATGAAGAATTCGTGCTGGCTCCTTGTTAAC
CTTGTTTACTTTGATGTTGTTCAGCATTGGACAGTGATGATTTGCTTTACCTTAAAGAGCAAATGGAGGCTGAGGAAGAT
GCAGAGCGTCTCCTCCGTCGTACAGAGAAGCGGGCATTTGCTGCCTTTAAGATATCCTCTCTTGCATGATAGTACATTAT
AGCATCTCCCACACGTTTTACAAGACAATCTTTAGTATAATCCAAGCGTTCTCGCTATGCATGCATGCTATTTTCCACAT
CTATTATTTGATT-TCTTGTCATTGGCCATGCAGTTGCAGCACAATATTCACATGCCTAGGGGTAGTTTTGCATCTTATC
GCAGCTTGCAGCATTCCACATTTCGATAACTCTGTCAGTTTGTTTGTTTGATTTCTTTAACTCTGGCATTACCAAGCAGC
AGTTCTAGCTGATTCTGCACCTCCTATTCCTGCGGCTCTTCGCGTCGAGCCTAGACCCAAAAGTGATATAAGGTAAGCCG
TGTGCGAGAAAAGACTCTGTTTCCATCAATGATACTTTTGCCTTCTGATTTGGCACATACCTTGTTATGGGCAGGCAACG
TGATCTCTTGAAGAAGATTGTTGAGATCAAACCAAAGCGAGCAAAAGTCAGCAGCCCTCGACAAACAGCAGAGGGCGATA
GACCTAAGCAGGAACAAGAAGATTCTGTGAGGAAAATGTCTACGCCTGAAGGTGAAAATGAACCGTCTCAAGGGCCAGTC
AGCTTTGTGCAACCTCTGTCAAAACCAGGTGATCCAGCGGAGGCCAAGTCGCAGCATGCAGCTGTAAGCTTACTTGGTTT
AGCGTATGAGAGTTCGGACGAGGAATAGTCGGTGGCGTGGAGAAATTGGTGTAGACTCCGTGTTGAAGTTTTTTAAGTTC
TCTTGCTAGACTCTGTTGTATCATCAGAAGGATAAAGAACTTATGCCGGCATTGATTAGGTGTCGCTGCTGGAAATCAAG
CCTGAGTTACTGATTGGGTAGACTATAATCTTGCAGAACTATATATGTGATTGCTAATGGTA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TACAAGTAAATGAAATTGAAAATAATAGAAAAACTAAATTTACTAGCTCCTTTA
TTTAAGAAAAAT-ATATTCACCATAGCAAAT-GTATCAGGTTGAAGAGGCTTTATAAATTCGTTATCTACTTGAATGGTC
AGCAACATTTGGATTCACTAAACTCACTGCTTTTATCTC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr2D_17
----------------CAAACCCCAAGTCTCACATCAAGTCTGCCTCTGGATGACTGCTTC-AATTTGGGGATTTCTTCA
TCAACCTTGATGCTGATTTTGCTGCAGTACTAATTATGTCCTGTCTGCACCTTGCATTGCATCTGTCATATCAGCCACAC
CTGAAACTGCATCTTGATCACATGTCCCGGGCTCGCCCACAGCTGCAACAAACATCCTCAAACACTTGCATATATTATCT
CCTGCCAAATTATTCTGCTTTTTATGAGCTGAAATCACTGTATCAGGAGTGAATATTGGATCCATCTCCTATGCTCATTT
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AATGTGCTTTACTGTAAGAGCTCAGAGAATGAGCATAGGGGATGG
ATCGGATATTGGATATTGGGTCCATCTTAAGTAGTTGTTAG-AG--------CACGTGTCCAGATTGCAAATGTTGTACA
GTATATCACATTCAATTGCCATGTATTGAGATGTCAAGTTGTCTTATGGAAAAAGTACTTTCTGACAACAAAGTCACAGG
ATTACTAAT-TTAGAAACTGCCGGCCATGCCAAGTTAACACCATTTGTGTTTGGACGGTAGTTTGAGACAGTAAGAGCTC
AACTACCAATTCATTTTTTGAGTGAAATTACCAATTGGTTGACCCAGTTGAGTCATACCATTTCTCTTTGAAGGGTTCTT
TATTGTTTTTCCTATACCAATTCTTGTTTTTTCGAAAAACTCTGTTCAAACTTTTAGCCTTCTTGGTTCGAAAAATTGTA
CCTAATGTTGGATCTAAATATAAATAGGGCCAGCCGAGCTCTCAGCCATGTCTGGACGTGAGGTTCGTGAGTACACTAAC
CTCAGCGACCCTAAAGGTTAGTGATTTCATCATTCTCAAGTCCCAGTGTGGACAAGTGGTTCTTCTCCTTTTTGGTTTAT
TGGACATTTTCTTAAATCAAATCATCACCTTTGGGGTTATGCGTATGCAGATAGAAAGTATGGGAAGGGGAAGGACAAGA
TCGACGATGAGGATGTCACCTTCCAGCGCATGGTAGCAAAGGTTAACCGGAATGCTCTTGCAAAAATAATTCTGATTAAC
TTGTGAATAAATTGAGTTATAATTACTTAGTAGCACTGTCCTGGTAGGTATCTTAATTTTAGGAAA-TTAGTTTAGCTGC
CAAAATCTAAGTTACATTATCGATTCTCACATTCGAATATTGGATAGTTTTGATATTTGAAATGAGGGTCATGGAAAGAA
AGAGGTCCGTTTTTGAGTTTTGACACGGTATTGTGCTTGGTACGGATATAGATAAGTGCAGAAGGCCTTTGATATGTTTG
TACCAATGAGCTTAAATTCAAGGAATTTACTTTGGATTGTGAGAAATCATTCAATGTGATCAGGAAAAAGATCAAGGCTG
TCTTAGGTTTAGGTAGCATACATTATCTG-----------------TTCGGGACAGTATTTAACTTGCTGGCAGTTGTGG
GCTTGTGGCCATGAGATTACTCGCTCTTCTTGAAAAATTGATCCCATTACTCAGTGTGCCTGCAATAGGCATTGATTTAC
GATGTTCTGATAACATGCCCTGACAGGGATTTTGGCTTTCTACTGGGCGGTTGATGCCAACAGATGCAGGATGTTGCTGG
TGAGCGGGGAGGCTACCTTCATGGGCGAGGAGGTATTTCATGCTTCTTTAATGAAGAATTCATGCTGGCTCCTTGTTAAC
CTTGTTTACTTCGATGTTGTTCAGCATTGGACAGTGATGATTTGCTTTACCTTAAAGAGCAAATGGAGGCTGAGGAAGAT
GCAGAGCGTCTCCTCCGTCGTACAGAGAAGCGGGCATTTGCTGCCTTTAAGATATCCTCTCTTGCATGA---TACATTAT
AGCATCTCCCACACCTTTTACAAGATAATCTTTAGTATAATCCAAGCGTTCTTGCTATGCATGCATGCTATTTTCCACAT
CTATTATTTGATTTTCTTGTCATTGGTCATGCAGTTGCAGCACAATATTCACATGCCTAGGGGTTGTTTCGCATCTTATC
GCAGCTTGCAGCGTTCCACATTTCGATAACTCTGTCAGTTTGTTTGTTTGATTTCTTTAACTCTGGCATTACCAAGCAGC
AGTTCTAGCTGATTCTGCACCTCCTATTCCCGCGGCTCTTCGCGTCGAGCCTAGACCCAAAAGTGATATAAGGTAAGCTG
TGTGCGAC-AAAGACTCTGTTTCCATCAATGATACTTTTGCCTTCTGATTTGGCACATACCTTGTTATGGGCAGGCAACG
TGATCTCTTGAAGAAGATTGTCGAGATCAAACCAAAGCGAGCAAAAGTCAGCAGCCCTCGACAAACAGCAGAGGGCGATA
GACCTAAGCAGGAACAAGAAGATTCTGTGAGGAAAATGTCTACGCCTGAAGGTGAAAATGAACGGTCTCAAGGGGCAGTC
AGCTTTGTGCAACCTCGGTCAAAACCAGGTGATCCAGCAGAGGCCAAGTCGCAGAATGCAGCTGTAAGCTTACTTGGTTT
AGCGTATGAGAGTTCGGACGAGGAATAGTCGGTGGCGTGGAGAAATTGTTGTAGACTCCGTCTTGAAGTTTTTCT-GTTC
TCTTGCTAGACTGTGTTGTATCATCAGAAGGATAAAGAACTTATGCCGTCA--------------CTGCTGGAAATCAAG
CCTGAGTTACTTATTGGGTAGACTATATTCTTGCAGAACTATATATGCGATTGCTAATGCTAATGTATATAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AAGTAAATGAAATCTCAAATAATAGAAAAACTAAATTTGCTAGCTCCTTTA
TTTAAGAAAAAA-ATATTCACCATAGCAAATGGTATCAGGTTGAAGAGGCTTTATAAACTCCTTATCTACTTGAATGGTC
AGGAACATTTGGATTCACTAAACTCAGTGCTTTCATCTCCATTACTGTACTATACTACTAATATACAGTTTATACCACAT
ACCCATACTAATAATACTAATAAAAGTATGAGTCCTGAAACTAATCAAACTTGTGCAGGTGTATTTGTTCGGGTGTCACA
TTGATTGATACTATGGAGAAGATTTCTACTAAAGACTTGAATCTAATTTTCAGTTTCTGAATTTATCTTGGTACTCCGTT
CACTATTATAAGATGTTCTAACTTTTTTCTAAATTGGATGTATGTAGACACGTTTTTGTGTATTTTTT-ACTCATTTCAC
TCTGTATCTAGTCCATATTGGAATATCCAAAACATCTTACAATAGTGAACGGAGGGAGTATTTCTTATTT
>SNPs
SSSSSSSSSSSSS------------------------------------S------------------------------
-------------------------------------S-------------------------------S----------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------
-----------------------------------------S--------------------------------------
-------------------------S-------------------S--------------------------------S-
-----------------------------S---------------------------------------S----------
---------------------------S------------------------------S---------------------
----------------SS---------------------------------------S------------------S---
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S------------------------------------------SS
----------------------------------------------S---------------------------------
-------------------------S------------------------------------------------------
------------------------------------------------------S-------------------------
----------------------------S----S----------------------S-----------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S----------S---------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--S-----------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------S------------------S-----------------S----------S-S---
-S------------------------------------------------------------------------------
-----------------------------SS--------S----------------------------------------
---------------------------------------------------S------------S---------------
------------------------------------------------------------------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS--S------S--------------------------------------------
------------S---------S---------------S-----------------------------------------
------------S------------S-------------------------------S----------------------
S-------------------------S-----------------------------------------------------
--------------------------------------------------S------S----------------------
-----------S-------S------------------------------S----------S---S--S---S-------
-S---S--------------S----------------------------S--------------------
>forward_435
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CCCAAAGCGGTCGATTTTCC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_2403
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CGCGACAAAGACTCTGTTTCC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_498
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GT
CGCCTTAGGGACGCTTTA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_2556
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGATA
GACCTAAGCAGGAACAAGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_750
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TTAGAAACTGCCGGCCATGG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_2751
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TGTGGCGTGAAGAAATTGTTGT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
