>input_sequence_44586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ATGGCTCCCGCTATTGAGGCAGTG
GAGAAGGTCAAGGTGGCAAGCACACCCGTTAAGCCTCCTGTTCTTAATGAAAGAATACTGTCATCCATGACCCGCAGACC
TGGTTCAGCGCATTCATGGCATGATCTTGAGATAGGTATTTGACATTTGATCTTCACAAAACATCGATTTCATTGCTTCC
CTCTTCTGAGAACTTACGTTTTGGACTTCTTTGTGCAGGCCCTGATGCACCAACTATCTTCAACTGTGTAAGGCCA--CC
CTAATATATTCCTACTGATTTCCCTTTCCTTCTAATTTT---GTTGTATAATTATCTGAAAGAAATTGCTGTATATTTAT
GCTACAAGTCCATATCAATAGCATGGCCCCTTTACTTCTGTTAACTTGAAAAGCAAGGGTTCCACCTCATATAAAATATA
------------------TATGTCACTTCAAGCTTCTCAATTTTGTTTAATTAGTTAATATCCTACATGCTTAGGAGTTC
TGAACAACAAACTAAAAAATAGATGCTATTTTATGCCAGGTCATTGAGATACCTAGGGGCAGCAAGGTTAAATATGAACT
TGACAAGAAAACTGGACTGATAATGGTAAAGCACTGCTATTCATTTTCCCCTCCTATTTTGA-TCTCTCTTGCCCAATCG
TTCTTATGGTTTTCGTTGGCTATACGCATGTGTGCAGGTGGACCGTGTGCTTTATTCATCAGTGGTGTACCCTCACAACT
ATGGATTCATTCCCCGCACGCTGTGTGATGACAGTGATCCGATGGATGTGCTAGTTATTATGCAGGTATGTCTTACTACT
TCCCTTTTGTGGTGTACCCTCACCAAAAGGGCAGAAGGTCGTTGTACTTCCTACTGTAGAATCTGTTAGTTGGTTGTAGA
ACATTAACAATCTGCATTCGCAAATCTTTGTAATTTG-----------TTGTTTGGGT-----TTTAAAATGTTATC-TT
TGTTGATACAGGAGCCAGTTGTGCCGGGCTGTTTCCTCCGCGCAAAGGCCATTGGCCTCATGCCTATGATTGACCAGGTT
TGCTTTCATCCTTC--------AACCCTGCAGTCCAAAGGAGGCAGAGATCCTAATCAGTATTTTCTTTGAACAGGGAGA
GGCAGATGATAAGATCATTGCAGTGTGCGCTGACGACCCTGAGTACAAGCATTTCAATGATATCAAGGAGCTCCCACCTC
ACCGGTTGGCTGAAATCAGACGCTTCTTTGAGGACTGTATCCTTGTTGATCC----------------------------
-------------------------------------------ACTTATATTCAGATATGACTAGCAAGCATTCCACCCA
A-AAAATGTCTGCCTATTTTGGTTTTACTTGCAAAAAGA---GCCCTAAGATTGAACCTGCAGGGTATTTGTAGGAAAAT
TACTGC-TCCTCGCCTCTTTGATGCAGTACTGCTACATAGCTATGTGCAT------TTGTAGTTTGTTGATAGCTGAAAC
ATCGATATTATATCATGCATAAACTGTCAAATTAGTGCGAACTTGATAATATCTGCCTCCTCTTGGATCGAATGATTTCT
TTAACCGTGACGTCCAGACAAGAAGAATGAGAACAAGGAAGTTGCTGTGAACGACTTTCTGCCCGCGACTGCTGCTTACG
AGGCCATTCAGCATTCCATGTGAGTGTTTCTTCCTTGAATCC--TCGGCATGGC--TGTCCTATATGATCTTGGTGCTGA
ACTGACGCCGTTCTTC-TTGGTGTTCTGTTCACAGGGATCTGTATGCTACTTACGTCGTGGAGGGCCTGCGGAGGTAG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr1D_1_TraesCS1D01G040000
TTTGGGTATGCGTTAGACATTGGTTTCCCATGGATGCTGACACCATGAAGCCTTCACCATACGGATTGTATTGTTGCATC
CTCATGATTCATGTGGGTGATAGGCGAATTTCATAAGAAATGATTCATTCTTAGTGTGGCGTTTTCTGTACACAGATTCG
GTAGGCAGTCTTATTTATTAACGGTTTCTGCCAAGGAAACAGCTTCCTAGTCTCACTTATTTAATGGTTGCTAAAAAATT
ATCAGTCTTGTCCTCCAAAAAATTCGCTAGTTCTGCTTATTCATGGTTTCTAAATCATTTATCTGGGTAATAAGAAATAG
TCTTCTCCTCCAAAAAAAATCACTAGTCCTACTTATTAATGATTAAAATAATTTATCTGGTTAATAAGAAACAGCCTTCT
CATGTTTCTACATCATTTATTTGATCGATAAGAAATGGTCTTGTCCTGCACATCTTTATCCTCAGCTGTAAACTGAACGG
TGTGTGGTAGTCATTTTCTATGTACATAAGTGGGTCGATTTCATCGCTGCACATTCAAAACATGTATGTT-GTTCATACA
GTTAATAATTAATTACAGGATGTTGATCCATTTGCCTATGCTTGTTCTGTAAACAAAATAAAATGGGTACTAAATTTAAT
CCAAGG-------ACACGAAAACCCATCCATCTCTATTCAGTACCTACTTTTGTCAGGTTGCTCGGGTCAGTTACTATTG
TTTGGTAGTTGCTCTCAACATAGCCATTCATTGTCTGCCAGTTTGTTTATTCTTTTGAGGGTCCCAGGTTACCACTTTCT
TATTTATTATCGTTTGCTCATTTGTGCCTATAATCTC--------GTGTTATCATAGATTGCCTTTATTCAAAGCTTGAC
GATTAATTTTTCCAGTTAACATTGTTGTATCTTCTATGATGACATTGACTTCACTTCTGTTGGACAGCTTTAATTGGAAT
TTCTGTATTTAGTTTTCTAAAATAAGCAAACATGCAATTGTTTTCAGGTTTTTGTGATGGCTCCCGCTATTGAGGCAGTG
GAGAAGGTCAAGGTGGCAAGCACACCCGTTAAGCCTCCTGTTCTTAATGAAAGAATACTGTCATCCATGACCCGCAGACC
TGGTTCAGCGCATTCATGGCATGATCTTGAGATAGGTATTTGACATTTGATCTTCACAAAACATCGATTTCATTGCTTCC
CTCTTCTGAGAACTTACGTTTTGGACTTCTTTGTGCAGGCCCTGATGCACCAACTATCTTCAACTGTGTAAGGCCA--CC
CTAATATATTCCTACTGATTTCCCTTTCCTTCTAATTTT---GTTGTATAATTATCTGAAAGAAATTGCTGTATATTTAT
GCTACAAGTCCATATCAATAGCATGGCCCCTTTACTTCTGTTAACTTGAAAAGCAAGGGTTCCACCTCATATAAAATATA
------------------TATGTCACTTCAAGCTTCTCAATTTTGTTTAATTAGTTAATATCCTACATGCTTAGGAGTTC
TGAACAACAAACTAAAAAATAGATGCTATTTTATGCCAGGTCATTGAGATACCTAGGGGCAGCAAGGTTAAATATGAACT
TGACAAGAAAACTGGACTGATAATGGTAAAGCACTGCTATTCATTTTCCCCTCCTATTTTGA-TCTCTCTTGCCCAATCG
TTCTTATGGTTTTCGTTGGCTATACGCATGTGTGCAGGTGGACCGTGTGCTTTATTCATCAGTGGTGTACCCTCACAACT
ATGGATTCATTCCCCGCACGCTGTGTGATGACAGTGATCCGATGGATGTGCTAGTTATTATGCAGGTATGTCTTACTACT
TCCCTTTTGTGGTGTACCCTCACCAAAAGGGCAGAAGGTCGTTGTACTTCCTACTGTAGAATCTGTTAGTTGGTTGTAGA
ACATTAACAATCTGCATTCGCAAATCTTTGTAATTTG-----------TTGTTTGGGT-----TTTAAAATGTTATC-TT
TGTTGATACAGGAGCCAGTTGTGCCGGGCTGTTTCCTCCGCGCAAAGGCCATTGGCCTCATGCCTATGATTGACCAGGTT
TGCTTTCATCCTTC--------AACCCTGCAGTCCAAAGGAGGCAGAGATCCTAATCAGTATTTTCTTTGAACAGGGAGA
GGCAGATGATAAGATCATTGCAGTGTGCGCTGACGACCCTGAGTACAAGCATTTCAATGATATCAAGGAGCTCCCACCTC
ACCGGTTGGCTGAAATCAGACGCTTCTTTGAGGACTGTATCCTTGTTGATCC----------------------------
-------------------------------------------ACTTATATTCAGATATGACTAGCAAGCATTCCACCCA
A-AAAATGTCTGCCTATTTTGGTTTTACTTGCAAAAAGA---GCCCTAAGATTGAACCTGCAGGGTATTTGTAGGAAAAT
TACTGC-TCCTCGCCTCTTTGATGCAGTACTGCTACATAGCTATGTGCAT------TTGTAGTTTGTTGATAGCTGAAAC
ATCGATATTATATCATGCATAAACTGTCAAATTAGTGCGAACTTGATAATATCTGCCTCCTCTTGGATCGAATGATTTCT
TTAACCGTGACGTCCAGACAAGAAGAATGAGAACAAGGAAGTTGCTGTGAACGACTTTCTGCCCGCGACTGCTGCTTACG
AGGCCATTCAGCATTCCATGTGAGTGTTTCTTCCTTGAATCC--TCGGCATGGC--TGTCCTATATGATCTTGGTGCTGA
ACTGACGCCGTTCTTC-TTGGTGTTCTGTTCACAGGGATCTGTATGCTACTTACGTCGTGGAGGGCCTGCGGAGGTAGGC
TGCTGCCTGGAGGCAA-----------CTGCTCCTTGTCGTCGGA-GCGGGACGATGTTGGCGAAAACCGGAGAATGAGA
CACTGTCACCTTACGAACTAAGTACTGTTATTTTGTTGGTGTTGGCATATGTACCACTGGTT-TAATGACCTTGAAAG--
-TAGTAGTTAGCACAAGAAAGAGTTGCGAAATATTCTTTTGTGGCCTCAGTGCCCCTATGTTGTTATTACCTCGATGTTG
TTGATTCTCTTGACGATTCAAGTCAGGCATAAGAAATTCATTGTCAATTTCTCATGGTCAGAAAATCAAATATGTCATGG
CTGTTGATTCCTTCACACCATAAAA---ACAGAGATGGTTCTTGATGGCAGAATTTCAACCAGAATGACATAAATTTCAG
CTACAGAAAATAGATTGGCATATCTAGCACTCCCTTAATTATAAATCAGCACACAGAATGGTT-----------------
-ATTTAGTAGTACATGGCAGCGGCAAGCCTTATTTGCAAAACAAGAACCATGTCTCTCCGTTTAGCAAT-----------
-----------------A--CTGTTACCTTGCAAAATACTACTCCCTCCATCCCAAAAAGCTTGTCTTAGATTTGTCTAC
ATTTGGATGTATGAAACACTAAAAC-TGTCTAGATTCATCCGTATATAGACAAATCTAAGACAAACTTTTTGGGACGGAT
GGAGTACTAAATACTGTAGATTTGTTAGTGTGAGTTGAGCATGCAC-AGCGAATCATCTTGAAATATTTATTTTGTAGCC
TTTTGCCCCTTCAAGTCAGGCATGAAAAATGCAATCTGTACGCAACCATCTAAATTTGTACTATCACGCTTCAAAGATTC
AGTCTATTTGTGACTCTTGCAAGAATGCAGAGATGAACGCTGTAACTAATTAACAAAATCAGAAGCTATTCCCAGATAAA
ACTTTCCGTGTAATCGACTGCAGAAAATCAGTCGGAATCAATCATGAAATTTGCAGCAATAGCAATTATCTCAAACGTGC
AACAGATGCAAATACAGTTAAAATAGA
>chr1B_517
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GATTTCATCGCTGTACATTCACAACATGTATGTTTGTTCATATA
TTTAATCATCAATTACAAGATGTTGATGCATTTGCCCATGCCTGCTCTGTAAATAAACTGAAGAAGGTGCTAGCATTCAT
CATACAGGGATATACATGAAAAACCATCCATCGATATCAAGTTCCTGGTTTCGTTGGGTTGCTTGGGTCAATTA-TATTG
TTTGGTTGCTGCTGTCAACGTAGTTG----------GACAAGTTGTTTTTTCATGAGAGTGCCAATTTTGTATTACTGT-
-----------GTTTGCTCATTTGTGCCTATGATCTCCTGACATGGTGTTATCATATCTAGTCTTTATTCAAAGCTCGAC
GATCG-CTTTTTCAGTTAGCATTCTTGTATCTTCTATGATGGCATTAACTTAACTTCTGTTGGGATGGC-----------
TTCTGTATTTAGGGTTCTAATAGAAGCAAACATACAATTGTTTCCAGGTTTTTGTGATGGCTCCCGCTATTGAAGCAGCA
GAGAAGGTCAAGGTGGCAAGCGCACCTGTTAAGGCTCCTGTTCTTAATGAAAGAACACTATCATCCATGACCCGGAGACC
TGGTTCAGCGCATTCTTGGCATGATCTTGAAATAGGTATTTGGCATTTGATCTTGACAAGATGTCGATATCATTGTTTCC
CTCTTCTGAAAACTTATGTTTTGGACTTCTTTGTGCAGGCCCTGATGCACCAACTATCTTCAACTGTGTAAGGCCGCGCC
CTAATATATTCCTACTGATTTTTCTTTCCTTCTAATTTCGTTGTATAATAATTATCTAAAATAAATTTCTGTGTATTTAC
GCTACAAGTCCATATCAATAGCATAGCCCCTTTCCTTCTGTTAACTTGAAAAGCAAGGGTTCCACCTCATATAAAATATA
------------------TATGTCATTTCAAGCTTCTCAATTTTGTTTAATTAGTTAATATCCAACATGCCTAGGAGTTC
TGAACGACAAACTAAAAAATAGATGCTATTTTATGCCAGGTCATTGAGATACCTAGGGGCAGCAAGGTTAAATATGAACT
TGACAAGAAAACTGGACTGATAATGGTAAAGCATTGCTGTTCATTTCCCC-TCCTATTTTGAATCTCTCTTGCCCCATCG
TTCTTATGGTTTTCGTTGGCTATATGCACGCGTGCAGGTGGACCGCGTGCTTTATTCATCAGTGGTGTACCCTCACAACT
ATGGATTCATTCCCCGCACACTGTGCGATGACAGTGATCCGATGGATGTGCTAGTTATTATGCAGGTATGTCTTACTACT
TCCCTTTTGTGGTGTACCCTCACCAAATGGGTAGAAGGCCGTTGTACTTCCTACTGTAGAGTCTGTTGGTTGGTTGTAGA
ACATTACCAATCTGCATTCGCAAATCTTTGTAA---------------------------------------------TT
TGTTGATACAGGAGCCAGTTGTGCCGGGCTGTTTCCTCCGTGCAAAGGCGATCGGCCTCATGCCTATGATTGACCAGGTT
TGCTTTCATAGTTTCATCGCTCAGCCCTGCAGTCCAAAGAAGGCAGAGATCCTGATCAGTATTTA-TTTGAACAGGGAGA
AGCAGATGATAAGATCATTGCAGTGTGCGCTGACGACCCTGAATACAAGCATTTCAATGATATCAAGGAGCTCCCACCTC
ACCGGTTGGCTGAAATCAGACGCTTCTTTGAGGACTGTATCCTTGTTGATCAACTTATATTCTCTCACCTTTTCAATGAA
ATGAAACGCAAAGAGTCCTTTGCGTTTTCTCGAGAAAAAAAAAACTTATATTCAGATATGAATAGCAAGTATTCCACAAA
ACAAAAAGTTTGCTTATTTTGGTTTTACTTGCAGAAAAGAGCCCCCTAATTTTTAACCTGCAGGATACTTCTAGGAAAAA
TCACCAGCCCTCGCCTCTTTTATGAATTACCGGTGCATGGCTATGTGCAT------TTGTAGTTTGTTTAGAGCTGAAAC
ATGGATA--------------AATGGACAAGGCAGTGCAAGTTTGTAGTACATGTCTCCCTCTTAGATCGAATGATTTCT
TTAACCGCGACGTCTAGACAAGAAGAATGAGAACAAGGAGGTCGCTGTGAACGACTTTCTGCCGGCGACTGCTGCTTACG
AGGCCATTCAGCATTCCATGTGAGTGTTTCTTTCTTGAATCCCCTCAGCATGGC--TGTCCTAGATGATCTTGGTGCTGA
GCTGACGCCGGTCTTC-TTGGTGTTCTGTTCACAGGGATCTGTATGCTACTTACGTCGTGGAGGGCCTGCGGAGGTAGGC
TGCTGCCCGGAGGTTCGGCTCGACGCGCTGCTCCTTGTCGTCGGGGCCGGGACGATGTTGGCGAAAACCGGAGAATGAGA
CACTGTCACCTTACGAACTAAGTACTGTTATTTTGTTGGTGTTGGCATATGTACCACTGGTTCTTATGACCTTGAATGTA
CTAGTAGTTAGCACAAGAAAGAGTGGCGCAATATTCTTTTGTGGCCTCGGTGCCCCTATGTTGTTACCTTCA------TG
TTGATTCTCTTGACGATTCAAGTCAGGCATAAAAAATTCGTTGTCAATTTCTCACGGTCAGATAATCAAGTATGTCATGG
CTGCTGATTCCTTTACACCACAAAGAATACAGAGATGGTTCCTGATAGCAGAATTTCAACCTAAATGACATAAATTTCAC
CTACAGAAAATAG-TTGGCATATCTGGTACTCCCTTATTTATAAATCAACACACAGAATGGTCACTTAGTAGTACCCCCT
TATTC--------------------------ATTTGCAAAACAAGAACCATGTCTCTCCCTTAGA---AAATCAACAAAC
ACAATGCCCATTTAGACA--CTGTTACCTTGCAAAATACTACTCCG----TCCCAAAAAGCTTGT-----ATTTGTCTAG
ATTTGGATGTATCTAATACTAAAACGTGTCTACATTCATCCATATCTAAGCAAATGTAAGGCGAACTTTTTGGGACGGTT
GGAGTACGAACTACTATAGATTTGCTAGTGTGACTTGAGCATGCACCAGCGAATCATCTTGAAATG-TTATTTTGTAGCC
TTTTGCCCCTTCAAGTCAGGCATGAAA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr1A_853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------TCAAAGCTTGGC
GATTG-TTTTTTCAGTTAACATTGCTGTATCTTCTATGATGATATTGACTTAACTTCTGTTGGACAGCTTTAATTGGAAT
TTAAGTATTTAGTTTTCTAAAATAAGCAAACATACACTTGCTTTCAGGTTTTTGTGATGGCTCCTGCTATTGAAGCAGCG
GAGAAGGTCAAGGTGGCAAGCACACCCATTAAGCCTCCTGTTCTTAATGAAAGAATACTGTCATCCATGACCCGGAGACC
TGGTTCAGCGCATTCATGGCATGATCTTGAGATAGGTATT-GACATTTGATCTTCACAAAACATCGGTTTCATTGTTTCC
GTCTTCTGAAAACTTATGTTTTGGACTTCTTTGTGCAGGCCCTGATGCACCAACTATCTTCAACTGTGTAAGGCCGC--C
CTAATATATTCCTGTTGATTTTCCTTTCCTTCTAATTTC---GTTTTATAATTATCTAACAGAAATTGTTGTATATTTAT
GCTACAAGTCCATATCAATAGCATAGCCCTTTTCCTTCCCTTAACTTGAAAAGCAAGGGTTCCACCTCATAAAATAGTAT
ATCATCTTTTAAGCCACCTATGTCATTTCAAGCTTTTCAATTTTGTTTAATTAGTTATTGTCCTAAATGCTCATGAGTTC
TGAACCACAAACTAAAAAATGGATGCTATTTTATGCCAGGTCACTGAGATACCTAGGGGCAGCAAGGTTAAATATGAACT
TGACAAGAAAACTGGACTGATAATGGTAAAGCATTGCTATTCATTTTCCC-TCCTATTTTGAATCTCTCTTGCCCAATCG
TTCTTATGGTTTTCGTTGGCTATATGCATGTGTGCAGGTGGACCGTGTGCTTTATTCATCAGTGGTGTACCCTCACAACC
ATGGATTCATTCCCCGCACACTGTGTGATGACAGTGATCCGATGGATGTGCTAGTTATTATGCAGGTATATCTTACTACT
TCCCTTTCGTGAACACTGGA-----------CAGAAGGTCGTTGTGCTTCCCACTTTATAATCTGTTAGTTGGTTGTAGA
ACATTAGCAATCTGCATTTGCAAATCTTTGTATTTGTCACTTCTACACTTGTTTGGGTCAGTGTTTAAAATGTTCATTTT
TGTTGATACAGGAGCCTGTTGTGCCGGGCTGTTTCCTTCGCGCAAAGGCCATTGGCCTCATGCCTATGATTGACCAGGTT
TGTTTTCATAATTTCATCTCTTAACCATGCAGTCCAAAGAAGACAGAGATGCTGATCACTATTTA-TTTGAACAGGGAGA
AGCAGATGATAAGATCATTGCAGTGTGTGCTGATGACCCTGAATACAAGCATTTCAATGATATCAAGGAGCTCCCACCTC
ATCGGTTGGCTGAAATCAGACGCTTCTTTGAGGACTGTATCCTTGTCGATCC----------------------------
-------------------------------------------ACTTATATTCAGATATGACTAGCAAGTATTCCACCCA
A-AAAAAGTCTGCTTATCTTGGTTTTACTTGTCAAAAGT---CCCCTAGGCTTGAACATGCAGAATATTTCTAGGAAAAA
ATACTGGTCCTCGCCTCTTTGATGCACTACTCGTACACAGCTATGTACATTTGTGCTTGTAGTTTGTTGATAGCTAAAGC
ATGGATCTTATATCATGCATAAATGGTCAAGGCAATGCAAGTTTGATTATATATGCCAATTCTTCGATCAAATGATTTCT
TTAACCTGGACATCCAGACAAGAAGAATGAGAACAAGGAGGTTGCTGTGAACGACTTTCTGCCTGCGACTGCTGCTTATG
AGGCCATTCAGCATTCCATGTGAGTGTTTATTTCTTGAATCC--TCAGCATGGCTGTGTCCTCAATGATCTTGGTACTGA
GCTGACGCCGGTCTTCTTTGGTGTTCTGTTCATAGGGATCTGTATGCTACTTACGTCGTGGAGGGCCTGCGGAGGTAGGC
TGCTGCCTGGAGGCTCGGCTCGACGCGCTGCTCCTTGTCGTCGGA-CCGGGGCGATGTTGATGAAAACCGGAGAATGAGA
CACT-TCACCTTACGAACTAAGTACTGTTATTTTGTTGGTGTTGGCATATGTACCACTGGTT-TTATGACCTTGAATG--
-TAGTAGTTAGCACAAGAAAGAGTGGCGAAATATTCTTTTGTGGCCTTGGTGCCCCTGTGTTGTTGTTACCTTGATGTTG
TTGATTCTCTTGACGATTCAAGTCAGGCATAAGAAATTCATTGTCAATTTCTCATGGTCAGAAAATCAAGTATGTCATGG
CTGCTGATTCCTTCACACCATA---AAAACAGAAATGGTTCTTGATGGCAAAATTTCAACCAGAATGACATAAATTTCAG
CTACAGAAAATAGATTGGCATATCTAGTACTCCATTAATTATAAATCAACACACATAATGGTC-----------------
-ATTC--------------------------AGTTGCAAAACAAGAACCATGTCTCTCCCGTACTTATAAATCAACAAAC
ACAATGGCCATTTAGACATACTGTTGCCTTGCAAAATACTAAACCCTCCATCCCAAAAAGCTTGTCTTACAGTTGTCTAG
ATTCGGATGTGTCTAACACTAGAACGTGTCTACATTCATCCATATCTAAGCAAATGTAACACAAACTTTTTGGGACAGTT
GGAGTACTAACTACTGCAGATTTGTTGGTGTGACTCGAGCATGCACCAGCAAACAATCTTGAAATG-TTATTTTGTAGCC
TCTTGCGCCTTCAAGTCAGGCATAAGAACAAAAATCTGTACACAACCATCTAATTTGTATTTGTCACGTTTCAGATTCTA
TTTGTAA--------CTTGCAACAATGCAGAGAGGAACACTGT-------------------------------------
--------------------------------------------------------------------------------
---------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-------S--------------------S-
S-----S--S-------S---------S--------S----S--S--------S---S-S--SSS---S---SSS--S--
-SS-SS----------S-----S---------SS---SS---S---SS---S--SS-------S------S---S-----
------S-S----S-----S---SSSSSSSSSSSSS-S--SS------S---S-SS---S-S-SSSSS-SSSSSSS-SSS
SSSSSSSSSSS--------------------S------------------------SS-S-S------------------
----SS-----S---------------------------------------S----------------------------
---------------------------------S---------------------------------------S----S-
--------------------------------------------------------------------------S-----
---------------------------------------------------------------------------S----
---------S------S----------------------------------------------------------S----
---------------------S----------------S------S-----------S----------------------
------------------------S--------S----------------------------------------------
-------------------------S------------------------------------------------------
-----S--------------------------------------------------------------------------
---------------------------------S----------------S-----------------------------
------------------------S-------------------------------------------------------
-------------------S------------------------------------------------------------
---------------------------S----------------------------------------------------
------S----------------------------SS-------------------------------------SSS---
--------------------------------------------------------------------------------
---------SS--S-------------------------S-------------S----------SS--------------
S-----------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
------S------S------------------------S---S-------S-------------S-----S--------S
-SSSSS--------------------S-----S-----------------------------------------------
--S--------------------SS-----SSS-----S-SS-----S----S----S------S---------------
-------S-------------------------------S-----------------------S----------------
--------------------------------S-------------S----------------S----------------
S---------S---------------------------------------------------------------------
--------------SS------------------------------S---------------------------------
----------------------------------------------------------------S-----------S---
------------------------S-----------------------S-----------------------S-------
---------------------------------------------------------------------S----------
---S--------------------S-------------------------------------------------------
---------------------------S--------------------S-------------S-----------------
----SSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S--SSSS-SS-----------
---------------------------------------------------------------------S---------S
------------SS------------------S--------S---S--SS-----S----------------------S-
----------S----------------------S-------------------------------SS-------------
----------------------------SSSS---------S-----------S--SSSSS-S-----S----S-SSS-S
SS-S--SSSSSSSSS-------S----------S----S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_44
------------------------TTCCCATGGATGCTGACACC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_2090
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CCTTCAACCCTGCAGTCCAA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_794
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TTGAGGGTCCCAGGTTACCA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_2486
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CTCCTCGCCTCTTTGATGCA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_2120
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TCAACCCTGCAGTCCAAAGG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_3634
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------GTTGAGCATGCACAGCGAAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
