>input_sequence_44576
--------------------------------------------------------------------------------
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----------------------------------------------------------------------TTATATATAG
CGCTAGCCCCCACCCCCTCTTTTACCTCATCCGCTTAATTGCACCGGCCCGGTCCCTGCCTCCATCTGTGCCTAGCCAGC
CAAGAAGATACTTTTCGTCACCAACCCGGCCGGCCACCGTGCGAGCTGAGAACGCGGCGGCGGCGCCATGGGGAGGCCTC
CGTGCTGCGACAAGGTGGGCGTCAAGAAGGGGCCCTGGACGCCGGAGGAGGACCTCATGCTCGTCTCCTACATCCAGGAG
CACGGCCCCGGGAACTGGCGCGCCGTGCCGACCAACACCGGTACGCACGGGATAGCGTAGGGGATCATGGATCGTCCGTG
GA--------TCGGGGCTCGATCTTGTGTGCAGGTGAATCGGAATTGGAA---------CTAACAAAGCTTTGTTGATTT
GGGGGCGT-TGCAGGGCTGATGCGGTGTAGCAAGAGCTGCCGGCTTCGGTGGACCAACTACCTCCGGCCGGGGATCAAGC
GCGGCAACTTCAACGACCAGGAGGAGAAGCTCATCGTCCACCTCCAGGCGCTCCTCGGCAACCGGTGATGATAGCTTCCA
TCTCATCTTCTCATGATTTCCGTCTTGTTGTTTGTTTGTTTCTTCCGTGGACGTAAAGTACAGAATTGCTGATATGAGCT
TGCGGTTGACGCCATGCGCAGTTGGGCGGCGATAGCGTCCTACTTGCCCGAGAGGACGGATAACGACATCAAGAACTACT
GGAACACCCACCTCAAGAAGAAGCTCAAGAAGATGCAGGACGCCGGAGGGAACGACGGCGGCTCGGAGGGCGCCGGCGCC
GGGGGTGTCGGTGGTGGCGTCCCGAAGGCGGCCGCTCCCAAAGGGCAGTGGGAGCGCCGGCTGCAGACGGACATCCACAC
TGCGCGGCAGGCCCTGCGCGACGCGCTCTCTCTAGAGCCCTCACAGCCCGCCGCGCTGGCGGCGCCGGCGCTGCCGACGC
CTAGTCCGGGGTCGGTGACGACGTACGCGTCGAGCGCGGACAACATCGCGCGCCTACTGGAGGGCTGGATGCGCCCCGGG
AGCAGCAGCAAGGGGCCGGAGGCGTCGGGGTCGACGTCGTCCACTACGGCGACGACCCGCCAGCAGCCGCAGTGCTCCTG
GGACGGCGCGGCGTCCGCGTCGGCGAGTCACAGCGGCGGCGCGGCCGGGGCGGCAGCAGCGCACACCCCCGAGGGCTCAA
CCGAGACGAGCAAGATGGCCGGCGCCGGGGCCGGCGGCGCCCCGCCGGCGTTCTCCATGCTTGAGAACTGGCTTCTTGAC
GACGGCATGGGCCACGGCGAGGCGGGACTCATGGACGACGTGGTGCCACTAGGGGACCCCAGTGAGTTCTTCTAAGTACG
GCGCGCGCGTACCAACCGGGAATTGATCGACTAGAGCAAGAACAAAAATTTAAGAAAGGCGCGGCGATCGCCGATCGAGT
AGCTGAGCAGAAACAACAAAAGGCCGGGGGGCTTCG---------AATCCTCGGTGATTTAGATCGAGCTGGGTGTCGAT
CCAGTTTGCTTAATCGTTTTAGATTTCAATTAGTTGCTCTTTGCGATGTTAATTAGGGTTTGAAACTGATCATGTCCTAA
ATGGATCGTGCAGGAGGGATAAAGAAAGAAATGTACATCT--TATAAAAGAAAGATCTATATAGATGCTTAATTTATAAT
TACTTACTTATAGTATACTCTTTATATTAATTTTACCTCATTAGTCATTTCTCCCATCGAGCTGAA--------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------
>chr5A_1_TraesCS5A01G227400
CATATGGATATACACACATTTATCATTAGTAACAATTGTGTATGTGCAATGCAAGTTTGCACATCATACATCACATGCTG
ATCTAACTTATTATTGACCATACTCATCTTTTTACTAAGAAGAAAATGTTTAAGTTATCAAATCATAAAAAACACTATGA
ATTAATTTGATAGCCAAATAATAAATTTATTAGGTAGAATCATGAAAGTCACAAAACACATATAATGTGTTTAGAAATAT
CACACAAGAATCAATCTAAATCGTCTATCATGAATTAACAAGTCAAAAAAAAAACTACTCAGACAAGTGCTAATTTTCAA
TGATCTAACTATCATGAGCCCATTAGATTAAAATTGGAT----------------------TCTACTAACTCGTATATTT
TTGTAGGTATATATTTCGCATTCCTTAACCAGAT--GCTGCACCACAATTTTCTGCTCATCTATGTAACTTTTTACTCCT
CGATCGTGTACACAGAAAAATGATGTTTTGACGAATTTGACTGCCTATATCATTCTAAATACCTATCGTTTGTGAA----
--CCGGAGATAGTAACCTAGATGCAGCGATCAATTACCCAACAAAAGAAAAATCTTCCCATTTAATTCCTCACAATAAAA
GGACACACCACACAACCAATACGAATCATTCAAAATCCATCCATAGCAAGATATAAAGCACAATTCACTCCACATTTCCA
AGTGTGCTCATTTATGAGGGAAACAAAAATGGCAGATATCCTGAAGCAGCGAGGCACTATACCAAACCCATCACCAGATT
CACTCGGCGGGTTACAATAATTCTGCTGACGGCCTGCAGCTGCTGTGTGGCTGCCCTGCGCCCCCTCCTCATTTTCGTGT
GCATGCCTAGTATACATGTTGCTGTAACATGTGTCAAAGTCACGTCGCAGTGGGTTAGCTCAGCATTCTACTCCGGGTCA
AACCTCAGTAGATAGTGTGGTAGCTAGCATTTCTCCTTCCCCCCAAGCCAGCCCGAGGCCACGCCACGGCTTATATATAG
CGCTAGCCCCCACCCCCTCTTTTACCTCATCCGCTTAATTGCACCGGCCCGGTCCCTGCCTCCATCTGTGCCTAGCCAGC
CAAGAAGATACTTTTCGTCACCAACCCGGCCGGCCACCGTGCGAGCTGAGAACGCGGCGGCGGCGCCATGGGGAGGCCTC
CGTGCTGCGACAAGGTGGGCGTCAAGAAGGGGCCCTGGACGCCGGAGGAGGACCTCATGCTCGTCTCCTACATCCAGGAG
CACGGCCCCGGGAACTGGCGCGCCGTGCCGACCAACACCGGTACGCACGGGATAGCGTAGGGGATCATGGATCGTCCGTG
GA--------TCGGGGCTCGATCTTGTGTGCAGGTGAATCGGAATTGGAA---------CTAACAAAGCTTTGTTGATTT
GGGGGCGT-TGCAGGGCTGATGCGGTGTAGCAAGAGCTGCCGGCTTCGGTGGACCAACTACCTCCGGCCGGGGATCAAGC
GCGGCAACTTCAACGACCAGGAGGAGAAGCTCATCGTCCACCTCCAGGCGCTCCTCGGCAACCGGTGATGATAGCTTCCA
TCTCATCTTCTCATGATTTCCGTCTTGTTGTTTGTTTGTTTCTTCCGTGGACGTAAAGTACAGAATTGCTGATATGAGCT
TGCGGTTGACGCCATGCGCAGTTGGGCGGCGATAGCGTCCTACTTGCCCGAGAGGACGGATAACGACATCAAGAACTACT
GGAACACCCACCTCAAGAAGAAGCTCAAGAAGATGCAGGACGCCGGAGGGAACGACGGCGGCTCGGAGGGCGCCGGCGCC
GGGGGTGTCGGTGGTGGCGTCCCGAAGGCGGCCGCTCCCAAAGGGCAGTGGGAGCGCCGGCTGCAGACGGACATCCACAC
TGCGCGGCAGGCCCTGCGCGACGCGCTCTCTCTAGAGCCCTCACAGCCCGCCGCGCTGGCGGCGCCGGCGCTGCCGACGC
CTAGTCCGGGGTCGGTGACGACGTACGCGTCGAGCGCGGACAACATCGCGCGCCTACTGGAGGGCTGGATGCGCCCCGGG
AGCAGCAGCAAGGGGCCGGAGGCGTCGGGGTCGACGTCGTCCACTACGGCGACGACCCGCCAGCAGCCGCAGTGCTCCTG
GGACGGCGCGGCGTCCGCGTCGGCGAGTCACAGCGGCGGCGCGGCCGGGGCGGCAGCAGCGCACACCCCCGAGGGCTCAA
CCGAGACGAGCAAGATGGCCGGCGCCGGGGCCGGCGGCGCCCCGCCGGCGTTCTCCATGCTTGAGAACTGGCTTCTTGAC
GACGGCATGGGCCACGGCGAGGCGGGACTCATGGACGACGTGGTGCCACTAGGGGACCCCAGTGAGTTCTTCTAAGTACG
GCGCGCGCGTACCAACCGGGAATTGATCGACTAGAGCAAGAACAAAAATTTAAGAAAGGCGCGGCGATCGCCGATCGAGT
AGCTGAGCAGAAACAACAAAAGGCCGGGGGGCTTCG---------AATCCTCGGTGATTTAGATCGAGCTGGGTGTCGAT
CCAGTTTGCTTAATCGTTTTAGATTTCAATTAGTTGCTCTTTGCGATGTTAATTAGGGTTTGAAACTGATCATGTCCTAA
ATGGATCGTGCAGGAGGGATAAAGAAAGAAATGTACATCT--TATAAAAGAAAGATCTATATAGATGCTTAATTTATAAT
TACTTACTTATAGTATACTCTTTATATTAATTTTACCTCATTAGTCATTTCTCCCATCGAGCTGAAATAAATCATTTCGT
ATCTTGTTTTCATG---TATTTGTTTCAAGTTTGATTGACACTGATCATATGCAGTTAAGTGGA-GTTTAATTGATTTCC
AACAATAATTTGTTTTCAAGATCAGATGCATCAAATGGACATGTTATCGGAAATTTTA-GTTTTGGATAATTTGGTAAAG
ATAAGTTTAAT-----------------------ATTATATAAAAAAA-TTGGTTCTTCCATGAGGTTCCCAAATGTAAA
GCCAAGTCCCACA----A-AAAAAGTTCGGGTTAAACTGGGATCTCATTTGTGAATCATGCATGTTTGTAATTTCTGTAA
TATTTAACATATCAAAATGAGTGGAAGGCTTGAAGTTCCCAAATTTACATCTGGAAGAATCGCCACATTAAAATGGTAC-
-GCTAGTATATATGCTCAAATCTTTTCATATTTGACTCAACTAGACATAGAGCTGTCATGCATTTATTTGATGGCATTTA
ATGCTTGAAAATCACATGTTGTACTGGATCCTTTCTTTACTTCAGCTGATATATTGAATTCTTTTAGGGACATCGATAGT
TAACATATACTATTGGATTTGATAATGTAGAAAATCACAGTTAAACTCACACACACACACACATACATACATACATACAT
ATATATATATATATATATATATATATATATATATGGAAAATACATCCTACCATATAGTGGTAGGTACCTCCACCCCTGTT
GCCGTCCGATCTGACCCGATCGTGGCGTGATGATTAACGGGTTTGGGTGGAGTAATTTTCTCTCCACCCGATAAATCAAC
CAGTAATATTGTTCCGATTTTTATGCATGGCTACGGTATAACAACCTCACATCCAACAATAAAGCCAATTTTAAAATCTG
GTCGCCGGCGTGCAACCCATCTCGTCGGGACTCACCAGATTTTATTCGTCGGCCGCCGCCTAAATCCATACCCGATTGGA
TCTGGAGCATGGATGCATGATACTACAAGGTACTCATTCTGGGACGGGATCGGAGACACTTT
>chr5D_4
---ATGGATACAAGCATATTTATCATTACTAACAATTGTGTATGTGCAATGCAAGTTTGCACATCATACATCGCATGCTG
ATCTAACTTATTATTGACAATACTCATCTT---ACTAAGAAGAAAATGTTTAAGTTATCGAATAGTAATAAACACTATGA
ATTAATTTGATACCCAAATAATAAGTTTATTAGGTAGAATCATGAAAGTCGCGAAATGCATATAATGTGTTTAGGAATAT
CGCAATAGAATCAATTTAAATCGTCTATGATGAATTAACAACTAAAAAAGAAA---------------------------
--------CTATCATGAG-CCATTAGATTAAAATTGGATGGGCGATTCAGATTTTTTGCATTCTACTAACTCGTATAGTT
TTGTAGGTATATATTTCGCATCCCTTAACCAGATACGCTGCACCACAATTTTCTGATCATCTAGGAAACTTTTTACTCC-
---TCGTGTTCACAGAAAAATGATGT---------TTTGACTGCCTATATCATTTTAAATACCTATCGTTT-TGAA----
--CTGGAGATAGTAACCTAGATGCAGTGATCAATTACCAAACAAAAAAAG-ATCTTCACATTTAATTCCTCACAATAAAA
GGACACACCACACAACCAATACGAATCATTTAAAATCCATTCCTAGCAAGA--TACAGCACAATTCACTCCACATTTTCA
AGTGTACTCATTTATTTGGGAAACAAAAATGGCAGATATCCTGAAGCAGCAAGGCACTATGCCAAACCCATCACCAGATT
CACTCGGCCGGTTACAATAATTCTGCTGACGGCCTGC-GCTGCTGTGTGGCTGCACTGCGCCCCCTTCTCATTTTCGTGT
G-------------CATGTTGCTGTAACATGTGTCAAAGTCACGTCGCAGTGGATTAGCTCAGCATTCTACTCCGGGTCA
AACCTCAGTAGACAGTGTGGTAGCTAGCATTTCTCCTTCCCCCCAAGCCAGCCCGAGGCCACGCCACGGCTTATATATAG
CGCTAGCCCCCACCCCCACTTTTACCTCATCCGCTTAATTGCACCGGCCCGGTCCCTGCCTCCATCTGTGCCTAGCCAGC
CAAGAAGATACTTTTCATCACCAACCCGGCCGGCCACCGTGCGAGCCGAGAACGCGGCGGCGGCGCCATGGGGAGGCCTC
CGTGCTGCGACAAGGTGGGCGTCAAGAAGGGGCCGTGGACGCCGGAGGAGGACCTCATGCTCGTCTCCTACATCCAGGAG
CACGGCCCCGGGAACTGGCGCGCCGTGCCGACAAACACCGGTACGCACGGG--------------CAACGATCGTTCATG
GATCGGGAGTTCGGGACTCGATCTTGTGTGCAGGTGAACTGGAATTGGAATAATTGGAATTAAC-AAGCTTTGTTGATTT
TGGGTGTTCTGCAGGGCTGATGCGGTGCAGCAAGAGCTGCCGGCTTCGGTGGACCAACTACCTCCGGCCGGGGATCAAGC
GCGGCAACTTCACCGACCAGGAAGAGAAGCTCATCGTCCACCTCCAGGCGCTCCTCGGCAACCGGTGATGATAGCTTCCG
TCTCATCTTTTCTTAATTTCCGTCTTGTTGTTTGTTTGTTTCTTCCGTGGACGTCAACTACAGAATTGCTGATATGAGCT
TGCGGTTGACGCCATGCGCAGTTGGGCGGCGATAGCGTCCTACTTGCCCGAGAGGACGGACAACGACATCAAGAACTACT
GGAACACCCACCTCAAGAAGAAGCTCAAGAAGATGCAGGACGCCGGAGGGAACGACGGCGGCTCGGAGGGCGCCGGCGCC
GGGGGTGTCGGTGGTGGCGTCACGAAGGCGGCCGCTCCCAAAGGGCAGTGGGAGCGCCGGCTGCAGACGGACATCCACAC
TGCGCGGCAGGCCCTGCGCGACGCGCTCTCTCTAGAGCCCTCACAGCCCGCCGCGCTGGCGGCGCCGGCGCTGCCGACGC
CTAGTCCGGGGTCGGTGACGACGTACGCGTCGAGCGCGGACAACATCGCGCGACTACTGGAGGGCTGGATGCGCCCCGGG
AGCAGCAGCAAGGGGCCGGAGGCGTCGGGGTCGACGTCGTCCACTACGGCGACGACCCGCCAGCAGCCACAGTGCTCCTG
GGACGGCGCGGCGTCCGCGTCGGCGAGTCACAGCGGCGGCGCGGCCGGGGCGGCAGCAGCGCAGACCCCCGAGGGCTCGA
CCGAGACGAGCAAGCTGGCCGGCGCCGGGGCCGGCGGCGCCCCGCCGGCGTTCTCCATGCTGGAGAACTGGCTTCTTGAC
GACGGCATGGGCCACGGCGAGGCGGGACTCATGGACGACGTGGTGCCACTAGGGGACCCCAGTGAGTTCTTCTAAGTACG
GCGCGCGCGTACCAACCGGGAATTCATCGACGAGAGCAAGAAC-AAAATTTAAGAAAGGCGT---GATCGCCGATCGAGT
AGTTGAGCAGAAACAACAAAAGGCC-GGGGGCTATAGTTCTGATTAATCCTCGGTGATTTAGATCGAGCTGGGAGTCCGT
CCAGTTTGCTTAATCGTTTTAGATTTTAATTAGTTGCTCTTTGCGATGTTAATTAGGGTTTGAAACTGATCATGTCCTAA
ATGGATCGTGCAGGAGGGATAAAGAAAGAAATGTACATCT--TATAAAAGAAAGATCTATATAGATGCTTAATTTATAAT
TACTTACTTAAAGTATACTTTTTATATTAATTTTACCTCATTAGTCATTTCTCTCATCGAGCTGAAATAAATCATTTTGT
ATCTTGTTTTCATGTAGTATTTGTTTCAAGTTTGATTGACACTGATCATATGCAGTTAAGTGGAGGTTTAATTGATTTCT
AACAATATCTTGTTTTCAAGATCAGATGCATCAAACGAACCTGTTATCGGAAATTTTAA-TTTTGGATAATTTGGTAAAG
ATAAGGTTAAT-----------------------ATTATATAAACATATTTGGTTCTTCCATGAGGTTCCCAAATGCAAA
GCCAAGTCCCTCAAAATA-AAAATGTTCGGGTTAAACTGGGATCTCATTTGTGAATCATGCATGTTTGTAATTTCTGCAA
TATTTAACATATCAAAATGAGTGGAAGGCTTGAAGTTCCCAAATTTACATCTGGAAGAACCACCACATTAAAATGGTACT
AGCTAGTATATGTGCTCAAATCTTTTCATATTTGACTCAACTAGACATAGAACTGTCATGCATTTATTTGATGCCATTTA
ATGCTTGAAAATCACATGTTGTACCGGATCCTTTCTTTACTTCAGCTGATATATTGAATTCTTTTAGGGACAACGATAGT
TAACATAT------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------
>chr5B_481
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------GTTTTGACGAATTTGACTGCCTATATCATTTTAAATACCTATCGTTT-TGAACTAG
AACTGGAGATAGTAACCTAGATGCAGTGATCAATTACCAAACAAAAAAAG-ATCTTCACATTTAATTCCTCACAATAAAA
GGACACACCACACAACCAATACGAATCATTTAAAATCCATTCCTAGCAAGA--TACAGCACAATTCACTCCATATTTTCA
AGTGTACTCATTTATGAGGGAAACAAAAATGGCAGATATCCTGAAGCAGCAAGGCACTATACCAAACCCATCACCAGATT
CACTCAGCGGGTTACAATAATTCTGCTGACGGCCTGCAGCTGCTGTGTGGCTGCCCTGCGCCCCCTTCTCATTTTCGTGT
GCATGTAGTAC-TACATGTTGCTGTAACATGTGTCAAAGTCACGTCGCAGTGGATTAGCTCAGCATTCTACTCCGGGTCA
AACCTCAGTAGACAGTGTGGTAGCTAGCATTTCTCCTTCTCCCCAAGCCAGCCCGAGGCCGCGCCACGGCTTATATATAG
CGCTAGCCCCCACCCCCACTTTTACCTCATCCGCTTAATTGCACCGGCCCGGTCCCTGCCTCCATCTGTGCCTAGCCAGC
CAAGAAGATACTTTTCATCACCAACCCGGCCGGCCACCGTGCGAGCTGAGAACGCGGCGGCGGCGCCATGGGGAGGCCTC
CGTGCTGCGACAAGGTGGGCGTCAAGAAGGGGCCGTGGACGCCGGAGGAGGACCTCATGCTCGTCTCCTACATCCAGGAG
CACGGCCCAGGGAACTGGCGCGCCGTGCCGACCAACACCGGTACGCACGGGATAGCGTA-GGGATCATGGATCGTTCACG
GA--------TCGGGACTCGATCTTGCGTGCGGGTGAACTGGAATTGGAA---------TTGAC-AAGCTTTGTTGATTT
GGGTGTGT-TGCAGGGCTGATGCGGTGCAGCAAGAGCTGCCGGCTTCGGTGGACCAACTACCTTCGGCCGGGGATCAAGC
GCGGCAACTTCAACGACCAGGAGGAGAAGCTCATCGTCCACCTCCAGGCGCTGCTCGGCAACCGGTGATGATAGCTTCCA
TCTCATCTTTTCTTAATTTCCGTCTTGTTGTTTGTTTGTTTCTTCCGTGGACGTCAACTACAGAATTGCTGATATGAGCT
TGCGGTTGACGCCATGCGCAGTTGGGCGGCGATAGCGTCCTACTTGCCCGAGAGGACGGACAACGACATCAAGAACTACT
GGAACACCCATCTCAAGAAGAAGCTCAAGAAGATGCAGGACGCCGGAGGGAACGACGGCGGCTCGGAGGGCGCCGGCGCC
GCCGGTGTCGGTGGTGGCGTCGCCAAGGCGGCCGCTCCCAAAGGGCAGTGGGAGCGCCGGCTGCAGACGGACATCCACAC
TGCGCGGCAGGCCCTGCGCGACGCGCTCTCTCTAGAGCCCTCACAGCCCGCCGCGCTGGCGGCGCCGGCGCTGCCGACGC
C---TCCGGGGTCGGTGACGACGTACGCGTCGAGCGCGGACAACATCGCGCGCCTACTGGAGGGCTGGATGCGCCCCGGG
AGCAGCAGCAAGGGGCCGGAGGCGTCGGGGTCGACGTCGTCCACTACGGCGACGACCCGCCAGCAGCCACAGTGCTCCTG
GGATGGCGCGGCGTCCGCGTCGGCGAGTCACAGCGGCGGCGCGGCCGGGGCGGCAGCAGCGCAGACTCCCGAGGGCTCGA
CCGAGACGAGCAAGCTGGCCGGCGCCGGGGCCGGCGGCGCCCCGCCGGCGTTCTCCATGCTGGAGAACTGGCTGCTTGAC
GACGGCATGGGGCACGGCGAGGCGGGACTCATGGACGACGTGGTGCCACTAGGGGACCCCAGTGAGTTCTTCTAAGTACG
GCGCGCGCGTACCAACTGGGAATTGATCGACTAGAGCAAGAACAAAAATTTAAGAAAGGCGTGGTGATCGCCGATCGAGT
AGTTGAGCAGAAACAACAAAAGGCC-GGGGGCTTCG---------AATCCT-GGTGATTTAGATCGAGCTGGGTGTCGAT
CCAGTTTGCTTAATCGTTTTAGATTTTAAGTAGTTGCTCTTTCCGCTGTTAATTAGGGTTTGAGACTGATCATGTCCTAA
ATGGATCGTGCAGGAGTGATAAAGAAAAAAATGTACATCTTATATAAAAGAAAGATCTATATAGATGCTTAATTTATAAT
TA-------------TACTCTTTATATTAATTTTACCTCATTAATCGTTTCTCCCATCGAGCTGAAATAAATCATATCGT
ATCTTGTTTTCAT---GTATTTGTTTCAAGTTTGATTGACACTGATCATATGCAGTTAAGTGGA-GGTTTAATGATTTCT
AACAATAATTTGTTTTCAAGATCAGATGCATCAAAATGGACCTCTTATCAAAAAATGCTGTTTTGAATAATTTGGTAAAG
ATAAGTTTAATCTTATATAAATTTTTTTGAGGGAATTATATAAAAATATTTGGTTCGTCCATGAGATTCCCAAAAGC---
GCCAAGTCCCTCA----AGAAAAAGTTCAGGTTAAACTAGGATCTCATTTGTGAATCATGCATGTTTGTAATTTCTGCCA
TATTTAACATATCAAAATGAGTGGAAGGCTTAAAGTTCCCAAATTTACCTATGAAAGAACTGCCACATTAAAATGGTACT
AGCTAGTATATATGCTCAAATCTTTTCATATTTGACTCAACTAGACATAGAGCTGTCATGCATTTATTTGATGCAATTTA
ATGCTTGAAAATCACATGTTGTACCGCATCCTTTCTTTACTTCAGCTGATATATTGAATTCTTTTAGGGACATCGATAGT
TAAACATA--TATTGAATTTGATAATGAAAAAAATCACAGTTAAACTCACA-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------
>SNPs
SSS-------S-SS--S-----------S-------------------------------------------S-------
------------------S-----------SSS--------------------------S---SS---S-----------
------------S-----------S-------------------------S-S---SS----------------S-----
-S--SS---------S------------S------------S-S-----S---SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS----------S----------------------------------------------------------S--
---------------------S---------------------------------S-------S-S-------------S
SSS------S--------------------------------------------S----------------S--------
---S----------------------S-----------S-------S--SS------S----------------------
------------------------------S---------S-S--------SS--S---------------------S--
-----S--------------------------------------------S-----------------------------
------------------------------------------------------------------S-------------
-----SSSSSSS-----------------------------------------S--------------------------
------------S-------------------------------------------------------------------
-----------------S--------------------------------------------------------------
----------------S---------------------------------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------------------------S---------------S-S--
---------------S----------------------SS-------------------S----S---------------
-----S---------------------S----------------------------------------------------
--------------------------------------------------------------------------------
---------S--S-S---------------------------------------S--S----------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
---------------------------------------------------------------S--------------S-
--------------S----------------------------------------------S------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S--S---------------
--S----------------------S------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-------------------------------------------------------------------------------S
-----------------------------------S----S---------------------------------------
----------------------------------------------S-----------------------------S---
----------S------------------------------------------------------------------S--
-----------------------------------------------------------S--------------------
-------------------------------------------------------------------------S------
------------------------S-------------------------------------------------------
--------SS-----S-----------S-S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_456
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GCTGCACCACAATTTTCTGC------------------------
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>reverse_2239
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AA
CCGAGACGAGCAAGATGG--------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_1446
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AGCTTTGTTGATTT
GGGGGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2302
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGAGAACTGGCTTCTTGAC
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_2255
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CTCAA
CCGAGACGAGCAAGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------
>reverse_3793
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------CTCATTCTGGGACGGGATCG----------
