>input_sequence_44570
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---------------------------------ATGGTCCCGCTTGGGCGCCTTCCGGCGCTGCCGCTAGCGCGTGGCTC
CACGCGCCGCCGCCTCCTCGCCGCCGGGGCCTCTGCCGCCTCACCGCTCCCATGGCCGGGCCTTCACACCTGGCGCCGGG
CCCCTCCCAGCGACCTCCGCTCGTGGGGCCCCAACGGCCCCTGCGTCCCGAACACGGACAAGGCGGGCGCGCCAGAAGCC
GGCGCCGGAGTCGGCGACGGCTCGTCCTTGGCCGAGATGGGCGCCCTCGTGCTGTCCACCGCCGACCCCCTCGCCAAGGC
GCACCTCACCCACGCCGCCTTCTCCCGGTGGGCGGCAGGCGGGCTCCCCGTGGGCCTCGCCCGGGCCCCGGACCACCCCG
CCAGGCCGGAAAAGCCCCTCGCGGTAAATGCTCCATCCACCT-----TGTTGCTCTCTTCGTCGAGGCATTTCATCGAGC
AGGTTGGG-TGTGTGGTGCTCTTGCTGCTGCAGGTGACTCAGAAGGAGGTCCCCACGCACAAGGCGATGGGGGTACCGCT
AAACGCGTACATGCTCCACAACCTGGCGCATGTCGAGCTCAATGCGATCGACCTTGCTTGGGACACTGTGGTGCGGTTCT
CGCCGCTCCGGGACACCCTGGGAGATGGCTTC---------TTTGCGCGTGTGGCTGACGATGAGAGCCGGCATTTTCGG
TGGTATTCACAGCGGCTTGCCGAGCTTGGCTTCAGGTGAGCAGCAGAGAGAATGCGGAAGTGTGAATATTGAATTGATGC
GAAATCTCTGTCCACTGATAGTTCTACCTGTTGTC--------TACTTGTCATAT-------GTCATAGTTTTCTATATG
AGCTATGTCAGATTGTTGTAAATCTGTAACAGTTTTCTGTGGGCAGATATGGTGATATGCCTGTCCACAATCTTCTGTGG
AGGGAGTGTGCAAAATCCTCAAGTGATGTTTCTGCACGGATGGCAGTTATACCTCTAGTACAGGTGCCAGATCATCTTCC
TTCTCTGTTGCACTGTCAAAAATACATTGTC-ATAACCTGCTCAATTTGAACCATGAGTCTCCGAATCTTTTTAGATGAC
AGTATTTGGTGAAGAATTTCGATTTAGTAC--ACTTGACCAATATGTTGATGATTAGAACCTTAATAGGAAGCTAGAGGC
CTTGATGCTGGACCGAGACTAGTCCAAAAGTTAATTGGCTTTGCGGACCATAGATCTGCAGACATTGTGGCAAAAGTAGC
AGAGGAAGAGCTTGCACATGTTTCTGTAGGTTTATATTGGTTTCTGAAAGTGTGCGAAATGATGGGCCGTGTCCCTGGTG
CTGCTTTTAGAGGTTAGGTTGCTTCTTTATGATCCACCTAAATACAATTTCATGAAATTATGTTGATTCATGGATTGT-T
CTCTTTAACATCCCAGATCTGATAAAGGAGCATGATGTTGTAATGAGGGGTCCATTTAACTATCAGTCTCGTGATGAAGC
TGGTATACCTCGAGAATGGTAAGCTTTGACTAAACTGTGAC--TGAATCTTGAAGTCTTGCGTGTATATATGAATAAGTC
ATA---TTGTTGATGTTTTTCAGGTATGATGAGATGCTTAAACCTGAAGTTGCAAGCAACCTTTCAGAGGTGAGGGACCA
TTTATTGTTTATCCGGTGTGTTTTGATGTATCTAACTTGTGGTATGTACCTCACAGGTGCATGATAGGCTAGCATGTGTT
ATTGAGATGGAGAAAGAGAATGCTAATTTGAATGGCTAA-----------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>chr3B_1_TraesCS3B01G164000
ATTTAAAATGTATCTAGCCCTATGTGCAGTCTTTAGATCGATAGAAATCTTATGGTCCAAAATGTTGAACCTAACATCTC
CGATTTCCTTAATGTTTGCAGATCTTAACGTCAGACAGAAGATGATGATAACCTGTAAGTTCACCAAAGATTCTGGCATG
ATATTTGCCGACACGATTCAATGTTGCCATCTGTAAATTTTGGTCATGTAGGGAAGCCTAACGACAACTGCTGCTGTCCG
TGTTGCTGTTTGGTCTTTTTAGCCTCAAAATAGTGGATGCCGGAGATCACGCATGCATTTCATGCGTCTGTACCATTATT
TGCAGTTATGTAACTATTGTAGAGTGCTGCGTTTACTTAGTCATTCGCTGGAAGTTATCTGACAATTGGATAGAAGACAC
CTGCAAATTGGGCAAGTAAAGACAGCCGGTGAAGACCAGGAACCTGGAGACCTCACCCTGTTGTAAGATTGTAAAATTGT
TATAGTTGGTTAATTCCTTTTGTTTTATTTTGGAACTAGCTAGTCTGTAATTTATGTTGCGTCGGAATAGCATGGATAAT
TCATTTTCCCCATTGCTCTGGTTGCTCTAAGCTGAAACTTTTTTTTTTTTTTTTTTTGCGGGTGAAGCTGAAACATTTTA
CCTCAATGTGGGGGCAGTAGAA-------------------------------AAGTAGCACAGTCGTTTTGCTTTTCTG
AAGCCTACACGTCAGTGAA---------CAAGTGATCTGAGTAACTGGTTCTTTACTGTTGG------------------
------CTCTCAACAGTAACCGTCTAGGA--TGATCTCATGGTTCTGAGTTTGTCTCCCCACA-------------ATTC
CAATTGATTC-----------------------------------ACTTTATGCGGTGAATAAGTGGTGCTATGCAACCC
GGTTT---TAGTTTGTTTTCCTGCAAAATAGCCCAACTCACGGAGGACCTGGCCTTTGACATGGCCTTTGTTCATCCATC
TCATTATCTATCCTAG----------------------------------CCGTAAACCTCCCACACGCCACAACACCAC
--CTCCAAAGCTCGAAACCGCTCCACCGGCCAAATGGTCCCGCTTGGGCGCCTTCCGGCGCTGCCGCTAGCGCGTGGCTC
CACGCGCCGCCGCCTCCTCGCCGCCGGGGCCTCTGCCGCCTCACCGCTCCCATGGCCGGGCCTTCACACCTGGCGCCGGG
CCCCTCCCAGCGACCTCCGCTCGTGGGGCCCCAACGGCCCCTGCGTCCCGAACACGGACAAGGCGGGCGCGCCAGAAGCC
GGCGCCGGAGTCGGCGACGGCTCGTCCTTGGCCGAGATGGGCGCCCTCGTGCTGTCCACCGCCGACCCCCTCGCCAAGGC
GCACCTCACCCACGCCGCCTTCTCCCGGTGGGCGGCAGGCGGGCTCCCCGTGGGCCTCGCCCGGGCCCCGGACCACCCCG
CCAGGCCGGAAAAGCCCCTCGCGGTAAATGCTCCATCCACCT-----TGTTGCTCTCTTCGTCGAGGCATTTCATCGAGC
AGGTTGGG-TGTGTGGTGCTCTTGCTGCTGCAGGTGACTCAGAAGGAGGTCCCCACGCACAAGGCGATGGGGGTACCGCT
AAACGCGTACATGCTCCACAACCTGGCGCATGTCGAGCTCAATGCGATCGACCTTGCTTGGGACACTGTGGTGCGGTTCT
CGCCGCTCCGGGACACCCTGGGAGATGGCTTC---------TTTGCGCGTGTGGCTGACGATGAGAGCCGGCATTTTCGG
TGGTATTCACAGCGGCTTGCCGAGCTTGGCTTCAGGTGAGCAGCAGAGAGAATGCGGAAGTGTGAATATTGAATTGATGC
GAAATCTCTGTCCACTGATAGTTCTACCTGTTGTC--------TACTTGTCATAT-------GTCATAGTTTTCTATATG
AGCTATGTCAGATTGTTGTAAATCTGTAACAGTTTTCTGTGGGCAGATATGGTGATATGCCTGTCCACAATCTTCTGTGG
AGGGAGTGTGCAAAATCCTCAAGTGATGTTTCTGCACGGATGGCAGTTATACCTCTAGTACAGGTGCCAGATCATCTTCC
TTCTCTGTTGCACTGTCAAAAATACATTGTC-ATAACCTGCTCAATTTGAACCATGAGTCTCCGAATCTTTTTAGATGAC
AGTATTTGGTGAAGAATTTCGATTTAGTAC--ACTTGACCAATATGTTGATGATTAGAACCTTAATAGGAAGCTAGAGGC
CTTGATGCTGGACCGAGACTAGTCCAAAAGTTAATTGGCTTTGCGGACCATAGATCTGCAGACATTGTGGCAAAAGTAGC
AGAGGAAGAGCTTGCACATGTTTCTGTAGGTTTATATTGGTTTCTGAAAGTGTGCGAAATGATGGGCCGTGTCCCTGGTG
CTGCTTTTAGAGGTTAGGTTGCTTCTTTATGATCCACCTAAATACAATTTCATGAAATTATGTTGATTCATGGATTGT-T
CTCTTTAACATCCCAGATCTGATAAAGGAGCATGATGTTGTAATGAGGGGTCCATTTAACTATCAGTCTCGTGATGAAGC
TGGTATACCTCGAGAATGGTAAGCTTTGACTAAACTGTGAC--TGAATCTTGAAGTCTTGCGTGTATATATGAATAAGTC
ATA---TTGTTGATGTTTTTCAGGTATGATGAGATGCTTAAACCTGAAGTTGCAAGCAACCTTTCAGAGGTGAGGGACCA
TTTATTGTTTATCCGGTGTGTTTTGATGTATCTAACTTGTGGTATGTACCTCACAGGTGCATGATAGGCTAGCATGTGTT
ATTGAGATGGAGAAAGAGAATGCTAATTTGAATGGCTAAAATCTCACCTGACGAATACTTGAGAGACTTGGTAGGTACTA
CACAGATATTCTAGCACACTGATACCTTTTTCTTGGTTTATTTTGATGCCAACCGCCACCAAGCTGCTTACATCCCTGAC
TAACCTTGGTTAGGTTGGTCACCTTGTCCTTTGCCTATATTCTACTTATTGGACCTTTTTAATTTGATATGCATGATCAC
ATCTATGA-------------------AAA---------AGATAAGAAAC-TTTTTTTTTGTTATGCTAGTATGCATCAG
CTGATTGAGCTATATGTGCACTTTGAATGATTGTAGGAAACAAACCTCACTAAGTGTTCAAGTTGTTGACAGTGGGGTCC
TGCCTGCCAGTTGGCTTCACAAGCCAGGGATTAGGGACGCACAAAGTTTCCTTAGCCTCAAATTTTTTGATGGGCCAT-A
ACCCATAATTAGGA----AAGTTGGGCAGGGGTATCCCCTGCCCCATCCTAGTTATTTTGCTTCACAAGTCACAACTAAT
ACAAGGACTATGGACAGCAATTAGCAGGAAGTATACTACCAATTGAATGAAATGGACGGATGTATTGATTGAGCCACTTT
CATCCCCTTTGCCAGAATAGCGATCCTGAAAAAATTA--GTCTAATATACACCTGGTCAAACGTCAAGGACAAAATGTAC
TTGTATATTCTTTTTTATGTATATACGC--------ATTCCACAACACGCAACATGCAGACCTCATGTAGTAATTTTTTC
TTATG-TTTTTTCTCAATATAGGTTTGAGTCTTC----------------------------------------------
--------------------------ACTAAAGTAAGAAAGCATTTGCAGTAGGAAACTCTCCTAATGTTTTCGTGGTAA
AAATAGAAAGCATTAGCTCAATACCATCCAATGTAAGGACGTCATGTGGGGCCTGAGGCCACATGCTAGTGACACCATGG
ATGATATTCTCTTCCGTGATCTTTGTAATGATACCGAGCAATATTGCCCCTTAAAGCAAATCCAGTTTTGTTGTTTCCGT
GTCACGTACACATATGTTTCTCCAATGAGTTGATGA
>chr3A_1
ATCTAAAATGTATCTAGCCCTAACTGCAGTCTATAGAATGATATAATTCTTATGGTCTAAAATGATGAACCTAACATCTC
CAGTTTCCTTG-TGTTTGCAGATCTTAACGTCAGACAGAAGA---TGATAACCTGTAAGTTCACCAAAGATTCTGGCATG
ATATT-GCCGACACGATTCAATGTTGCCGTCTGTAAATTTTGGTCATGTAGGGAAGCCTAACAACCACTGCTGCTGCCCG
TGTTGCTGTTAGGTCTTTTTAGCCTC---ATAGTGGATGCCGGAGATCACGCATGCATTTCATGCGTCTGTACCATTATT
TGCAGTTATGTACCTATTGTAGAGTGCTGCGTTTACTTAGTCATTCGCTGGAAGTTATCTGACAATTGGATAGAAGACAC
CTGCAAATTGGGCAAGTAAAGACAGCCGGTGAAGACCAGGAACCTGGAGACCTCGCCCTGTTGTAAGATTGTAAAATTGT
TATAGTTGGTTAATTTCTTTTGTTTTATTTTGGAACTAGCTAGTCTGTAATTTATGTTGGGTCGGAATAGGGCGGATAAT
TCATCTTTCCCATTGCTCTGATTGTTCTAAAGATCTCTACACGCTCGTTTGAGCTGTAACATTAAACATT-----TTTTA
CCTCAATAATGGAGGCAATCTGGAGGTTCACTTGGCAGTAAAAAAGTACTCGTAATTAGTACAGTCGTTTCACTTCTCAG
TTCTCTAAACTTCACTGATGCTAGTGGTCAAGTGATCT-AGTAAATGGTTCTTACTTTTCTTGCTGGTGGTTCTTTGCAT
CTCTATCTCTCAACATTACCCGTTCAGGACCTGATCTCATGGTTCTCATTTGGTGATTGTGCCCACACCGTAAAACATTC
CAATTGTTTTTACTTTTATTTTTGAGGGGCTTCCATTTTTTTTCTACTTTGTGTGGTGAATAAGCTGTGCTATGCAAACC
AATTTT--TAGTTTTTCTCCCTGCAAAAAA-------------TGGTCCTAGCCTTTGACCTGGCCTTTGTCGTTCATCC
GTCTCAT-TATCCTAG----------------------------------CCGTGAACCTCCCACCCCA--------CAC
CTCTCCAAAGCTCAAAACTGCTCCGCCGGCCAAATGGTCCCGCTTCGGCGCCTTCCGGCGCTGCCGCTAACGCGTGGCTC
CACGCGCCGCCGCCTCCTCGCCACCGGG---------GCCTCACCGCTCCCATGGCCGGGCCTTCACACCTGGCGCCGGG
CCCCTCCCAGCGACCTCCGCTCGTGGGGCCCCAGCGGCCCCTGCGCCCCGAACACGGACGAGGCGGGCGCGCCAGAAGCC
GGCGCCGGAGCCGGCCACGGCTCGTCGCTGGCCGAGATGGGCGCCCTCGTGCTGTCCACCGCCGCCCCCCTCGGCAAGGC
GCACCTCACCCACGCCGCCTTCTCCCGGTGGGCGGCAGGCGGGCTCCCCGTGGGCCTTGCGCGGGCCCCCGACCACCCCG
CCAGGCCGGAAAAGCCCCTCGCGGTAAATGCTCATCCACCATCCTCCTGTTGCTCTCTTCGTCGAGGCATTTGATCGAGC
AGGTTTGGCTGTGTGGTGCTCTTGCTGCTGCAGGTGACTCAGAAGGAGGTCCCCACGCACAAGGCGATGGGGGTGCCGCT
AAACGCGTACATGCTCCACAACCTGGCGCACGTGGAGCTCAATGCCATCGACCTTGCCTGGGATACTGTGGTGCGGTTCT
CGCCGCTCCGGGACACCCTGGGAGATGGCTTCTTTGCCGATTTTGCGCGTGTGGCCGACGACGAGAGCCGGCATTTTCGG
TGGTATTCACAGCGGCTTGCCGAGCTTGGGTTCAGGTGAGTGGCACAAAGAATGCGGCAGTGTGGATGTTGAATCGATGC
GAAATCTCTGTCCACTGGTTGTTCTGCCTGTTGTC--------AACTTGTCATACATTGGCGGTGATAGTTTCCTTTATG
ACCTATGTCAGATTGTTGTAAGTTTGTAACAGTTT-CTGTGGACAGATATGGCGATATGCCTGTCCACAATCTTCTGTGG
AGGGAGTGTGCAAAATCCTCAAGTGATGTTTCTGCACGGATGGCTGTTATACCTCTAGTACAGGTGCCAGATCATCTT-C
TTCTCTGCGATACTGTAAAAAATACATTGTTTATGACCTGCTCGGTTTGAACCATGAGTTTCCAAATCTTTTTAGATGAC
AGTAGTTGGTGAATAATTTTGATTTAC--TAGACTTGACCGATATGTTGATGATTAGAACCTTAATAGGAAGCTAGAGGC
CTTGATGCTGGACCAAGACTAGTCCAGAAGTTAATTGGCTTTGCGGATCATAGATCTGCCGACATTGTGGCAAAAGTAGC
AGAGGAAGAGCTTGCACATGTTTCTGTAGGTTTATATTGGTTCCTGAAAGTATGCGAAATGATGGGCCGTGTCCCTGGTG
CTGCTTTTAGAGGTTAGGCTGGTTCTTTATGATCCAC-TAAATACAATTTCATGAAATTATGTTGATTAATGGATTGTTT
CTCTGTAACATTCCAGACTTGATAAAGGAGCATGATGTTGTAATGAGGGGTCCATTTAATTACCAATCTCGTGATGAAGC
TGGTATACCTCGAGAATGGTAAGCTTTGACTATACTGTGACTATGAATCTAGAAGTATTGCATGTATATATGAATAGGTT
ATATTGTTGATGCTGTTATTCAGGTACGATGAGACGCTTAAACCTGAAGTTGCAAGCAACCTTTCAGAGGTGAGGGACTA
TCTATTGTTTATCCAGTGTGTTTTGATGTATCTAACTTGTGGCGTGTACCTCACAGGTGCATGATAGGCTAGCATGTGTT
GTTGAGATGGAGAGAGAGAATGCTAGTTTGAATGGCTAAG-TCTCACATGACGAATACATGAGAGACTTGGTACGTACGA
CGCAGATATTCTAGCACACTGATACTTTTTTCTTGGTTTATTTTGATGCCAACCACCACCAAACTGCTTTCATCCCTT--
--------------------------------GTCTATATTCTACTTATTGGACCTTTCCAGTTTGACATACATGATCAC
ATCTATTATGTCGTATTATCATTATGGAAA---------AGATAAGA----TTTTTTTTTGTTATGCTAGTATGCATCAG
CTGATTCAGCTATATGTGCACTTCGAATGATTGTAGGAAAGAAAAACACCG-AGTGTTCAAGTTGTTGACAGTGGGGTCC
TGCCTGCCAGTCGGCTTCACAAGCCAAGGATTAGGGACGCACAAAGTTTCCTTAGCCTCAAAGTTTTTGATGGGCAAG-C
ACCCATAATTAGGAATGCAAGTTGGGCAGGGGTACCCCCTAAGCCATCCTAGTTATTTTGCT-------TCACAACTAAC
ACGAGGATTATGGACAGCAATTAGCAGGAAATGAACCACCAATTGAATGAAATGGATGGATGTATTGATTGACCCACCTG
CATCA-CTTTGCCAGAATAGCCATCCTGATAAATTTACAGTCTAGTATATACCTGCTCAAATGTCATGAACAAAAAGGAC
CTGAACATTCTTTTTTCTGCATGT--GTATAAGTGTATTCCACAACACGCAAGGCCTCATGTA-----------------
-------------------------------------------------GTTGGCTTCATTCTCAAATGGGACGCGCTTC
TGGTGCCC------TTTGATCAGTTAACTAAAGTAAGAAAGCATTTGCAGTAGGTAGCCCTCTATTT-TTTTCGGGGTAA
AAATAGAAAGCATCGGCTCAATATCAT-----------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>chr3D_4
---TAAAATGTATCTAGCCCTGTGTGCAGTCTTTAGAATGATAGAAATCTTATGGTCCAAAATGATGAACCTAACATCTC
CTGTTTCCTTA-CGTTTGCAGATCTTAACGTCAGACAGAAGATGATGATAACCTGTAAGTTCACCAAAGATTCTGGCATG
ATATTTGCCGACACGATTCAATGTTGCCGTCTGTAAATTTTGGTCATGTAGGGAAGCCTAACAACAACTGCTGCTGTCCG
TGTTGCTGTTAGGTCTTTTTAGCCTC---ATAGTGGATGCCGGAGATCACGCATGCATTTCATGCGTCTGTACCATTATT
TGCAGTTATGTAACTATTGTAGAGCGCTGCGTTTACTTAGTCATTCGCTGGAAGTTATCTGACAATTGGATAGAAGACAC
CTGCAAATTGGGCAAGTAAAGACAGCCGGTGAAGACCAGGAACCTGGAGACCTCGCCCTGTTGTAAGATTGTAAAATTGT
TATAGGTG-------------GTTTTATTTTGGAACTAGCTAGTCTGTAATTTATGTTGTGTCGGAATAGCATGGATAAT
TCA-TTTCCCCATTGCTCTGGTTGCTCTAAGCTGAAAC------------------------------------ATTTTA
CCCCAATGTGGAGGCAGTAGAA-------------------------------AAGTAGCACAATCGTTTTGCTTTTCTG
AAGATGGGGCAGGGGC----------------------------------------------------------------
---------------------------GACCTGATCTCATGATTCTGAGTTTGTCTCCCCACA-------------TTTC
CAATTGGTTTCACTTTA-------------------------------TTATGCGGTGAATAAGTTGTGCTATGCAAATC
CGTTTTACTAGTTTGTTTCCCTGCAAAATGGTCCGACTGACAGTGGACCTCGCCTTTGACCTGGCCTTTTTTGTGGCCAT
CTCATCGGCTGGACGCGTTGACGTGTGCATAGCAGCGTTGTTATCCTAGCCCGTAAACCTCCCACACCA--------CAC
--CTCCAAAGCTCGAAACTGCTCCACCGGCCAAATGGTCCCGCTTGGGCGCCTTCCGGCGCTGCCGCTAGCGCGTGGCTC
CACGCGCCGCCGCCTCCTCGCCGCCGGGGCCTTCGCCGCCTCACCGCTCCCATGGCCGGGCCTTCACACCTGGCGCCGGG
CCCCTCCCAGCGACCTCCGCTCGTGGGGCCCCAACGGGCCCTGCGCCCCGAACACTGACAAAGCGGGACCTCCAGAAGCC
GCCGCCGGAGTTGGCCACGGCTCGTCCTTGGCCGAGATGGGCGCCCTCGTGCTGTCCACCGCCGACCCCCTCGCCAAGGC
GCACCTCACCCACGCCGCCTTCTCCCGGTGGGCGGCAGGCGGGCTCCCCGTGGGCCTCGCCCGGGCCCCGGACCACCCCG
CCAGGCCGGAAAAGCCCCTCGCGGTAAATGCTCCATCCACCT-----TGTTGCTCTCTTCGTCGAGGCATTTCATCGAGC
AAGTTGGG-CGTGTGGTGCTCTTGCTGCTGCAGGTGACTCAGAAGGAGGTCCCCACGCACAAGGCGATGGGGGTGCCGCT
AAACGCGTACATGCTCCACAACCTGGCGCACGTCGAGCTCAATGCCATCGACCTTGCTTGGGATACTGTGGTGCGGTTCT
CGCCGCTCCGGGACACCCTGGGAGATGGCTTCTTTGCGGACTTTGCGCGTGTGGCTGACGATGAGAGCCGGCATTTTCGG
TGGTATTCACAGCGGCTTGCCGAGCTTGGGTTCAGGTGAGT-GCCCGAAGAACGCGGCAGTGTGAATATTGAATTGATGT
GAAATCTCTGTCCACTGATAGTTCTGCCTGTTGTCCTGTTGTCTACTTGTCATAT-------GTCATAGTTTTCTGTATG
AGCTATGTCAGATTGTTGTAAATCTGTAACAGTTTT-TGTGGACAGATATGGTGATATGCCTGTCCACAATCTTTTGTGG
AGGGAGTGTGCAAAATCCGCAAGTGATGTTTCTGCACGGATGGCAGTTATACCTCTAGTACAGGTGCCAGATCCTCTTCC
TTCTCTGTTACACTGTCAAAAAGACATTGTC-ATAACCTGCTCAATTTGAACCATGAGTCTCCGAATCTTTTTAGATGAC
AGTATTTGGTGAAGAATTTCGATTTAGTATATACTTGACGAATATGTTGATGATTAGAACCTTAATAGGAAGCTAGAGGC
CTTGATGCTGGACCAAGACTAGTCCAAAAGTTAATTGGCTTTGCGGACCATAGATCTGCAGACATTGTGGCAAAAGTAGC
AGAGGAAGAGCTTGCACATGTTTCTGTAGGTTTATATTGGTTCCTGAAAGTATGCGAAATGATGGGCCGTGTCCCTGGTG
CTGCTTTTAGAGGTTAGGTTGGTTCTTTATGATCCA-CTAAATACAATCTCATGAAATTATGTTGATTCATGGATTGT-T
CTCTTTAACATCCCAGATCTGATAAAGGAGCATGATGTTGTAATGAGGGGTCCATTTAACTATCAGTCTCGTGATGAAGC
TGGTATACCTCGAGAATGGTAAGCTTTAACTAAACTGTGAC--TGAATCTTGAAGTATTGCATGTATATATGAATAAGTC
GTA---TTGTTGATGTTTTTCAGGTATGACGAGGCGCTTAAACCTGAAGTTGCAAGCAATCTTTCAGAGGTGAGGGACCA
TTTATTGTTTATCCGGTGTGTTTTGATGTATCTAACTTGTGGTATGTACCTCACAGGTGCATGATAGGCTAGCATGTGTT
GTTGAGATGGAGAAAGAGAATGCTAGTTTGAATGGCTAAAATCTCACCTGATGAATACTTGAGAGACTTGGTAGGTACTA
CACAGATATTCTAGCACACTGATACCTTTTTCTTGGTTTATTTTGATGCTAACCACCACCAAGCTGCTTACATCCCTGAC
TAACCTTGGTTAGGTTGGTCACCTTGTCCTTCGTCTATATTCTACTTATTGGACCTTTTCAATTTGACATGCATGATCAC
ATCTATTATGTCGCATTATCATTATGGAAATTATGGAAAAGATAAGAAACTTTTTCTTTTGTTATGCTAGTATGCATCAG
CTGATTGAGCTATATGTGCACTTTGAATGATTGTAGGAAAAAAAACTCACTAAGTGTTCAAGTTGTTGACAGTGGG-TCC
TGCCTGCCAGTTGGCTTCACAAGCCAGGGATTAGGGACGCACAAAGTTTCCTTAGCCTCAAAGTTTTTGATGGGCTACAA
ACCCATAATTAGGAATGCAAGTTGGGCAGGGGTATCCCCTGCCCCATCCTAGTTATTTTGCT-------TCACAACTAAT
ACAAGGACTATGGACAACAATTAGCAGGAAGTAAACCACCAATTGAATGAAATGGATGGATGCATTGATTCAGCCACTTT
CATCCCCTTTGCCAGAATAGCGATCCTGAAAAAATTACAGTCTAATATACACCTGCTCAAACATCAAGGACAAAATGTAC
CTGCATATTCTTTTTTATGTATGT--GC--------ATTCCACAACACGCAACATGCAGACCTCATGTAGTAATTTTTCC
TTATTTTTTTTACTCAATATAAGTTTGAATCTTCACTGAAGTTTCATTTGTTGGCTTCGTTCTCAAATGGGACGTGCATC
TTTTGCCCTTATATTTTGATCGGTTAACTAAAGTAAGAAAGCATTTGCAGTAGGAAACTCTCCTAATGTTTTCGCGGTAA
AAATAGAAAGCATTAGCTCAATACCATCCAAAGTAAGGATGTCATGTGGGGCCTGAGGCCACATGCTAGTGACACCATGG
ATGATATTCTCTTCCGTGATCTTTGTAATGATACCGAGCAATATTGCCCTTTAAAGCAA---------------------
------------------------------------
>SNPs
--S----------------------------------SS-------------------------S---------------
-SS--------S--------------------------------------------------------------------
----------------------------S---------------------------------S-----------------
----------S---------------SSS---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
---------------S-------------------------------------------S--------------------
--------------------------------------SSSSSS-SS---SSSS-S-SSSSS-S--SS-SSSSS------
--------------------------------------------------------------------------------
---S---S--S-------S-------------------S-----S--------SSS-S-SSS------------------
---------------S--S----SS-------------------------------------------------------
------S--S-------------------------------------------------------S-----------S--
S-----------------S------------S--S---S--S-S------S---------S-----------SS---SS-
SSS----S-----------------------------------------------------------SSSSSSSSSS---
------------------S-------------------------------------------------------------
--------------------------------SS----------------------------------------------
---------------------------------------------S----------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------------S--------------S-----------------S----------------
--------------------------------------------------------------------------------
-----------------------------S----------SS---S-S---------S----------------------
-------------------------S-------------------------------------------------S----
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------S-----------------------------------------------------------------
------------------------------------------S--------S----------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S----S------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
S------------------------S------------------------------------------------------
------------------------------------------------------S-------------------------
-------------------------------S-S-------------------------S-------S------------
------S-------------------------------------------------------------------------
----------------------------------------S---S-----------------------------------
--------------------------------------------------------------S------------S-S--
--------------------------------------------------------------SSSSSSS-----------
---------------------------------S--S-------------------S-----------------------
-------------------------------------------------------S------------------------
S--S------------------S-SS----------------------------------------------------S-
----S------S---------S------S---------------------------------------------------
--------------------------------------------------------------------------S-----
-------------------------------S-------S----------------------------------------
-------------------------------------------------S---------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_634
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------TTTGCGGGTGAAGCTGAAAC------
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------------------------------------
>reverse_1726
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GATCGACCTTGCTTGGGACA---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>forward_1139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
ACCTCCAAAGCTCGAAACC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>reverse_3015
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------GCCACCAAGCTGCTTACATC------
--------------------------------------------------------------------------------
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------------------------------------
