>input_sequence_44562
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----------------------------------------------------------ATGCCGCCGCCCAGCCTGACCG
CCGCGAACGACCGGGTCGCCGCCACCGCCTCCGCCGCGAACGGCCACGCGGGGCCGGACGCGCGCCGCCGCGCGGGCAAG
GGCAAGAAGGTCCACCCGCTGCCGGCCGACGGCGCCGCGATGGGGGACGGCGCTGGCG---GCGAGAGGCTGGCGGGCGG
GAGGAGGCCGATGGACTGGCTGTCGCCGTCCGGGGTGGCCGGCATCCTGCGGCGGCACCCGCTGCCGGCGCTGTTCGCGT
GCGGGCTGCTGCTCTTCATGGGCGTGGAGTACACCATCCCCATGGTCCCCGCCGCCGCGCCGCCGCTCGACCTCGGCTTC
CACGCCACCGCCGCCATGCACGCCGGGATCGCCGCCCGCCCCTGGCTCAACTCGCTCCTCGCTGCGCTCAACACGGTGAG
CGCACTTCCCTGCCATGCCTAGATCTGATCGGCGAATGAACCTAGCTCCTGCCGATCTG-CCCATCTGCTCCA-------
CCAGCAATTTTTCCCCTTTTGCTTTTTGACCTCTTGATGTTACCCTCTCATCG------ACCAAACGTGAAGGCAACCAG
CGCTTTCCGTTGAGCAGAACAGGCTACATTGTAGCCACGCACACCAGAAAGTGGAAACTGAACAGG--------------
-CTCACGAATTTCACGTAACCATTTGTCTTTTCGTGCAGAGTTTGCTCTCCTTTTCGTA----TTTTGTAGATGCAATTT
GTCTCACATTTTACACGAACATACCATTGCCACCTCCTGCATCTAAATTTTCCGT--AGAACTTTCACACCCGCTGTCGG
CGGAGCAGTTTAATCCCAGTTTGA-----ACTAGTACACTCCTATTTATACAATTGATAAAAAATTTAATACGCATCGGT
GGCAGTTGCACATCAACATCTCTTGCTTTAATTATAGGAATGATGATGTCTAGGCTCTGGTATTGTGACAACAAGTGAAT
CTTTGTGAATTGTTTCCTCGCTCCGGGTGGTGAGGGAAGCAAAACTAGCTGGTAGCCATAAAGCAAAGGACCAAGAAACT
GATGAATGGTGTT----------------------------GGGTGAGCTAGCTCACCCTAAAACCACTACCATCCAACT
TTTCGGATAAGATCAAGAATATCATCGTCATGCATTCTCCACATACCCATGGATTTCCTGATAAGATACTGCATCTGGCT
AGATAGCTACCCGGTCCCCGCTCCAATTGCCACTAGTTGCTAGTGTTGCCATGACGGAATCCATGCTGAATGTGACATGC
GACCCTCTCATGTGCAGGTGTTCGTCGCGATGCAGGCCGCATACATCCTGTGGGCCGTCCTCGCCGAGCAGCGGCCGCGT
GCCGCCATCGCCACGCTCATGATGTTCACCTGCCGTGGCCTGCTCGGGTGCTCCACGCAGCTGCCCCTGCCGGCGGAGTT
CCTGGGCTCCGGGATGGACTTCCCCGTGGGGAACGTGTCCTTTTTCCTCTTCTATTCTGGGCACGTCGCCGGAGCGGTGA
TCGCGTCCATCGACATGCGCCGCGTGGGACGGCGCAGGCTGGCGGTGCTCTACGACACGCTCAACCTGCTGCAGTTCGTC
AGGCTGCTTGCGTGCAGAGGGCATTACACCATTGACCTGGCCGTCGGTGTCGGCGCTGGTCTCGTCTTCGACATGCTCGC
CGGCTGGTACCTGGACAGCAAGAACATCGACAGCGGCGACAACCGTTGCTGCAGCAGCTGCCAGAAGGCTCTCGTCTCAC
AGAAGCTTACATCATAG---------------------------------------------------------------
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>chr7A_1_TraesCS7A01G378300
CATCAATGAGGGCGGGCGTGCCTCCT---C---CTCGGCTCCTCCCCGCGTCGTCAAGCCGAAGACGGAGTCGGGTCTCG
CCGCCGTGAAGACGAAGCCATGGCTCGCTGCCGTGAAGA-----------------------------------------
-------------CGGAGCTCGACGACACGTCGGCCT-TGAAG---------------TGGGCGCG-GACGGAGCTGGAG
CGCCAACGCCTCGCC-------AGTTCGTCGCTCGGCGCCGTGGCCGCGACGAGGGAGGCGTCATTGTCCT---------
---CGACAACAACAACGACGACGACGCGC---CT---CCACCGGTCCGCCGGGGCGACCCCGGGCAGGGGTCCAGCAAGG
GCGGCCGCGTGAAGGAGGAGAAGGACGACGAGGACA------AC------GACGGC------GACAGCGACGGTG-----
-GCGACTTCGCCTCTCTCAGCGTGTTATTCGGCCCGTAGTCGCGGCCTCTTGTGTATTTT-TTTCTAA------GTATT-
---TTA-----TCTATGTA-A-AAAG-CTATTTCAGTTCGCCGGAGTAT--TACTG----------TTT----------C
GCCGAATATTTTGTCCTATTTGCCGAATTTTAGTCGAATTAATA--TTCAAAAAAGTTTAAAACAGGCGCAC--GGGGCC
GACCTGGGGGCGTCGGCTGGGAACCCAATTACCCTGTGGCCGATTTT-AG--CGCCGGTTCGCCACCAGGCGGCGATTTT
TGGAGCCACCTGGA---CCAACGGCTGGAGATGCTTTAACTCCGGACGTGTTCGCAGGCTCTAAAATGACAAATATTTAG
GAAGAGAGAGAGTACTACCTATTGTGGCTAGTATTAAACCGCCGGGCCTCTGCATTAAACACCCGCCTCTCTCTCTTTCC
TCGGGACCTCCGCCACGCGCCGCAGCCGTCGGAGAGAAAAAAACGCTTACAAAAGCACCGCGAATCTCAAGGTGGGAAAT
CCGCCAATCCAATCGGACGAAAGAAAAGAGAAAA-TTCCCACCACCGACCGCGTCACTCACGCGCGCGCACGCGCACCCG
CGCTGAAAACGGCCCACCGCCCACGCGCCCCGCGGCCAGCCGACGCGTCCTCGCGCGCATGCCGCCGCCCAGCCTGACCG
CCGCGAACGACCGGGTCGCCGCCACCGCCTCCGCCGCGAACGGCCACGCGGGGCCGGACGCGCGCCGCCGCGCGGGCAAG
GGCAAGAAGGTCCACCCGCTGCCGGCCGACGGCGCCGCGATGGGGGACGGCGCTGGCG---GCGAGAGGCTGGCGGGCGG
GAGGAGGCCGATGGACTGGCTGTCGCCGTCCGGGGTGGCCGGCATCCTGCGGCGGCACCCGCTGCCGGCGCTGTTCGCGT
GCGGGCTGCTGCTCTTCATGGGCGTGGAGTACACCATCCCCATGGTCCCCGCCGCCGCGCCGCCGCTCGACCTCGGCTTC
CACGCCACCGCCGCCATGCACGCCGGGATCGCCGCCCGCCCCTGGCTCAACTCGCTCCTCGCTGCGCTCAACACGGTGAG
CGCACTTCCCTGCCATGCCTAGATCTGATCGGCGAATGAACCTAGCTCCTGCCGATCTG-CCCATCTGCTCCA-------
CCAGCAATTTTTCCCCTTTTGCTTTTTGACCTCTTGATGTTACCCTCTCATCG------ACCAAACGTGAAGGCAACCAG
CGCTTTCCGTTGAGCAGAACAGGCTACATTGTAGCCACGCACACCAGAAAGTGGAAACTGAACAGG--------------
-CTCACGAATTTCACGTAACCATTTGTCTTTTCGTGCAGAGTTTGCTCTCCTTTTCGTA----TTTTGTAGATGCAATTT
GTCTCACATTTTACACGAACATACCATTGCCACCTCCTGCATCTAAATTTTCCGT--AGAACTTTCACACCCGCTGTCGG
CGGAGCAGTTTAATCCCAGTTTGA-----ACTAGTACACTCCTATTTATACAATTGATAAAAAATTTAATACGCATCGGT
GGCAGTTGCACATCAACATCTCTTGCTTTAATTATAGGAATGATGATGTCTAGGCTCTGGTATTGTGACAACAAGTGAAT
CTTTGTGAATTGTTTCCTCGCTCCGGGTGGTGAGGGAAGCAAAACTAGCTGGTAGCCATAAAGCAAAGGACCAAGAAACT
GATGAATGGTGTT----------------------------GGGTGAGCTAGCTCACCCTAAAACCACTACCATCCAACT
TTTCGGATAAGATCAAGAATATCATCGTCATGCATTCTCCACATACCCATGGATTTCCTGATAAGATACTGCATCTGGCT
AGATAGCTACCCGGTCCCCGCTCCAATTGCCACTAGTTGCTAGTGTTGCCATGACGGAATCCATGCTGAATGTGACATGC
GACCCTCTCATGTGCAGGTGTTCGTCGCGATGCAGGCCGCATACATCCTGTGGGCCGTCCTCGCCGAGCAGCGGCCGCGT
GCCGCCATCGCCACGCTCATGATGTTCACCTGCCGTGGCCTGCTCGGGTGCTCCACGCAGCTGCCCCTGCCGGCGGAGTT
CCTGGGCTCCGGGATGGACTTCCCCGTGGGGAACGTGTCCTTTTTCCTCTTCTATTCTGGGCACGTCGCCGGAGCGGTGA
TCGCGTCCATCGACATGCGCCGCGTGGGACGGCGCAGGCTGGCGGTGCTCTACGACACGCTCAACCTGCTGCAGTTCGTC
AGGCTGCTTGCGTGCAGAGGGCATTACACCATTGACCTGGCCGTCGGTGTCGGCGCTGGTCTCGTCTTCGACATGCTCGC
CGGCTGGTACCTGGACAGCAAGAACATCGACAGCGGCGACAACCGTTGCTGCAGCAGCTGCCAGAAGGCTCTCGTCTCAC
AGAAGCTTACATCATAGGGCTATCAATGGCCGTGGAATTGCAGTGGACTGGAC--GATCCAAGTCATTTTTTAGAATGCT
ACTTACTGATATGTAATTGTGTAACTGTGTTTGTCCTTTGTAAGTTAAGTTGCAACATCTTCTGAAATGCAAGTATCAGA
A-------GCTTAAAGTACATCACAAGACAGGAATCAGCACAGGAACCAAGCTGGG-------AAGTGGCAACAGATGGC
AAAGGTCAAGATGCACCATTTATTTCTGATTGAAGGATGGTACTCTCAAGATTATTTTTGCATCCATGTTACAGGATGAT
TTACTCCTAGCTTAGAGGACATACATATGACAGCACATTGCCAAAGTATACAACAGGTGAATAGGTGGTTATTTCTATCT
AGTATACATCGGTTGCTTCTTCTACCTCAGTCTTGCACCATGGAACTGGTCACCCCACAAACAACAGCAGGCTGGTCAAG
CAAACATCGCAAACACCGAAATGGATCATCAGTTTCATCACAGCAACACACATCTGTCGTGCCACACCGCTGACATC---
-ACGGACACCGTTATTTTTGGTCGCCATCGGCAGACCCATTCTGTTCACCGAGCTTGTGAAACTCGGCCTGGATGACCTC
CACAATCATGGCGTCATCGGGGTCTTGATCGGGGATGTCTACGTGCAAAGAACCCTGCTTGATGAGTTCCTGATTCAGCG
CCTGCTGCTCGATGTAATGGTAGAGCTCTTGGTGGAAAGGGTGGTCGAGCGAGAAGCAGTCATCGATGCTGCTCAACGAA
GCTTTTGATGAACCCTCTCGTCGACAGAAATGGGGGATGGAGGAATGGTCCATAATCTGCATAGTCCAAATAAATGGTCC
ATGGAGGTCTCATTCTCTTATCTCTCTTGCTTAATTAGAGTGCAGTAATGTCTTGATGAGCAACGAGTGATGAAAATAGC
ACTAGCAAGTAATCTTACCTTTAGGAGCTCATCTTTCCCACGACCACTCAAAACATGAACCTTCTTTCTTGTCCTCT
>chr7D_1
CATCAACGAGGGCGGGCGCGCCTCCT---C---CTCGGCTCCTCCACGCTTCGTCAAGCCGAAGACGGAGCCGAGGCTCG
CCGGCGTGAAGACGGAGCTAGGGCTCGCCGGCGTGAAGACGGAGCCA---------------------------AG----
-----------------GCTCAACGACGCGGCGGCCT-TGAAGTGGGCGCGCGAGGACTAGGCGCG-GACGAAGCTGGAG
CGCCAGCGCCGCGCCTTTGAGTAGTTCGCTGCTCGGCGCCGTGGCCGCGACATGGGAGGCGTCGTTGTCCT---------
---CGACGACG------------ACGCGC---CT---CCACCGGTCCGCCATGGCGACCCCGGGCAGGGGTCGAGCAGTG
GCGGCCGCGTGAAGGAGGAGAAGGACGACAAGGACA------AC------GACGGC------GGCAACGAC---G-----
-GCAACTTCGCCTCTCTCAGCGCGTTATTCGGCCTGTAGTCACGACCTCTA-T---GTTT-TC--TTTTCTAATGTATT-
---TTA-----TCTATGTA-A-AAAAACTATTTCAGTTCTCCGAAGTAATGTACTG----------TTT----------C
ACCGAATA-TTTGTTCGGTTCACCGAATTTTAGTCGAATAAATG--TTCAAAAAAGTTTAAAAC-AGGCGTCTGGGGCTG
ACCCTGG-GGCGTTGGCTGGGAACCCAATCGCCCCCAGGCTGATTTT-AG--CTCCGATTCGCCCCCAGGTGGCGATTTT
TCGAGCCACCTGGGGGGCCAACGGCTGGAGATGCTCTAA-----------------------------------------
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>chr7D_1
CATCAACGAGGGCGGGTGCGCCTCCT---CCTCCTCGGCTCCTCCCCGCATCGTCAAGCCGAAGACGGAGCCGGGGCTCG
CCGCCGTGAAGACGGAGCCAGGGCTCGCCGGCGTGAAGACGGAGCCA---------------------------GG----
-----------------GCTCGAGGACGCGGCGGCCTTTGAAGTGGGCGCGTGAAGACTGGGCGCA-GACGGAGCTGGAG
CGCCAGCGCCGCGCCCTAGAGCAGATCGCTGCTCGGCGCCGTGGACGCGACGAGGGAGGTGTCGTCGTTAT---------
---CGACGACGACAGCGACGATGACGCGC---CG---CCACCGGTCCGCCAGGGCGACCCCGGCCAGGGTTCCAGCAGGG
GCGGCCGCGTGAAGGAGGAGAAGGACGACGACAACGGCGGCGAC------GGCGG-------------------------
--CGACTTCGCCGCGCTCAACGCGTTCTTCGGCCTGTAGTCGCGACCTTTA-T---TTTT-TC--TAA------GTATT-
---TTAAGTGTTCTATGTA-A-AAAAACTACTTAAGTCGCCGAAGTTAATGTCCTG----------TTT----------T
GCCGAATA-TTTGTCCCATTCGCCGAATTTTAGCAGAATTTATG--TTCAATTTTTTTTAAGAATAGCGTCT--GGGGCG
ACCCTAGGGGCAGCGACTGGGTACCCGATCGCCTCCATGCTGATTTT-TTTGCGCCGGTTCGCCCCA--GCAGCGATTTT
TGGAGCC-CCTGGGAGGCCAACGGCTGGAGATGCTCTAA-----------------------------------------
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>chr3D_1
CATCAACAAGGGCGGGCGCGCCTCCT---C---CTCGGCTCCTCCCCGCGTCGTCAAGCCGAAGACGGAGCCGTGTCTCG
CCGCCATGAAGACGGAGCCAGGGCTCGCCGGCGTGAAGACGGAGCCA---------------------------GG----
-----------------GCTCGACGACGCAGCGGCCT-TGAAGTGGGCGCGCGAAGACTGGGCGCG-GACGGAGCTGGAT
CGCCAGCGCCTCGCCCTAGAGTAGTTCGCCGCTCGGCGCCGTGGCCGCGACAAGGGAGGCATCGTCGTCCT---------
---CGAGGACGACATCGATGAAGACGCGC---CG---CCACCAGTCCGTCAGGGCGACCCCGGGCAGGGGTCCAGCAGGG
GCAGCCGCGTGAAGGAGGAGAATGATGACGAGGACA------AC------GGCGGTGT------------C---G-----
-GCGACTTCGCCTCTCTCAGCACATTATTCGGCATGTAGTCGCGGCCTCTTGTG--TTTT-TTTCTAA------GTATT-
---TTA-----TCTATGTA-A-AAAAA--AATTCAGTTCGCCAAAG---TATACTG----------TTT----------C
GTCGAATA-TTTGTTCCATTCGCCGAATTTTAGTCAAATTAATG--TTAAAAAAAGTTTAAAAC-AGGCGTCTGGGGCCG
ACCCTGTGGGCGTCGGCTGAGAACCCGACCGCTCC-AGACCGATTTT-AG--CGCTGGTTCATCATCAGGCGGCGATTTT
TAAAGCCACCTGGGAGGCCAACGGCTGGAGTTGCT---------------------------------------------
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>chr3D_1
CATCAACGAGGACAGGCGCGCCTCCT---CA------GCTCCTCCCCGCGTCGTCAAGCCGAAGACGGAGCCGAGTCTCG
CCGCTTTGAAGACGGAGCCAGGGCTCACCGCCGTGAAGACGA--------------------------------------
----------------AGCTCGACGATGCGGCGGCCT-TAAAGTGGGCGCGCGAAG----GGCGCG-GACGGAGCTGGAG
CGC-AGCGCCTCGCCCTAGAGCAGTTCGCCGCTCGGCGCCGTGGCCGTAACGAGGAAG----------------------
-----------------ATGACGACGCGC---CG---CCATCGGTCCTCCAGGGCCACCCCGGGCAGGGGTCCAGCAGGG
GCGGCCGCGTGAAGGAGGAGAAGGACGACGAGGACA------AC------GGCGG-------------------------
--TGACTTCGCCTCTCTCAGCGCGTTATTCAGCCTCTTGTC--------TA-T---TTTT-TTTCTAA------GTATT-
---TTA-----TCTATGTA-A-AAAA-CTATTTCAATTCGCTGAAGTA---TACTG----------TTT----------C
GCCGAATATTTTGTCCCGTTCGCTGAATTTTAGTCGAATTAATG--TTCAAAAAGATTTAAGAC-AAGCGCCTGGGGCCG
ACCCTGGGGGCGTCAGCTGGGAACCCGATCGCCACCAGACCGATTTT-AG--CGCCGATTCGTCCCCAGGTGGCGATTTT
TGGAGCCACATGGAGGGCCAACGGCTGGAGATGCTCTAAC----------------------------------------
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>chr3D_1
CATCAACGAGGGCGGGCGCGCCTCCT---C---CTCGGCTCCTCCCCGCGTCGTCAAGCCGAAGACGGAGCCGGGGCTCG
CCGCCGTGAAGACGGAGCTAGGGCTCGCCGGCGTGAAGATGGAGCCG---------------------------GG----
-----------------GCTCGGCGACGCGGCGGCCT-TGAAGTGGGCGTGCAAAGACTGGGCGCG-GACGGAGCTGGAG
AGTCAGTGCCGCGCCCTAGAGCAGATCGCCGCTCGGCGCCGTGGCCGCGACGAGGGAGGCGTCGTCGTTCT---------
---CGACGACGACAGCGACGGCGATGCAC---CG---CCACCGGTCCGCCAGGGCGACCCTGGGCACGGGTCCAGCAGGG
GCAGCCGCGTGAAGGAGGAGAAGGACGACGAGGACA------AC------GGCGGCAACGACGACGG---C---G-----
-GCCACTTCACCGCGCTCAGCGCGTTCTTCGGCCTGTAGTTCCGGCCTTTT-T------------TAA------GTATTT
ACCTTC-----GCTATGTA-A-AAAA-ACTATTGAAGTCGCCTAAGTAATGTCATGTTTGCCGAATTTT----------A
GCCGAATC-TTTGTCCCTTTGGCCGAATTTTAGCCGAATCTTTG--TTCAAAAAACTTTAAATA-AGGCATCTGGGGC-G
ACGCTGGGGCCGGCGGCTGGGAACC-------------------------------------------------------
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>chr6D_1
CATCAACGAGGGCGGGCGCGCCTCCT---C---CTCGGCTCCTGCCCGCTTCGTCAAGCCGAAGACGGAGCCGGGGCTCG
CCGCCGTGAAGACGAAGCCAGGGCTCGCCGGCGTGAAGGAGGAGCCA---------------------------GG----
-----------------GCTCGACGACGCGGCGGCCT-TGAAGTGGACGCGCGAAGACTGGGCGTG-GACGGAGCTGGAG
CGCCAGCGCCGCACCTTTGATCAGTTAGCCACTCGGCGCCGTGGCCGCGATGAGGGAGGCGTCGTCATCCT---------
---CGACGACGACAGCGACGACGACGCGC---CG---CCACCGGTCCGCCAGGGCGACCGCGGACAGGGGTCCAGCGGGG
ACGGCAGCGTGAAGGAGGAGAAGGACGACGAGGACA------ACAGCGACGGCGG-------------------------
--CGACTTCGCCTCTCTCAGCGCGTTATTCGGCCTGTAGTCGTGGCCTCTT-T---GTTTCTTTCTAA------GGATT-
---TTA-----CCTATGTA-ATAAAAACTATTTTAGTTCGCCGAAGTAATATATTG----------TTT----------C
ACAGAATA-TTTGTCCCGTTCGCTGAATTTTAGTCAAATAAATG--TTCAAAAAAGTTTAAAAT-AGGCGCCTGGGGCCG
ACCCTGGGGGCGTCGGCTGGGAACCCGATGGCCCCCAGGCCAATTTT-AG--CGCCAGTT--------------------
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>chr3B_1
CATCAACAAGGGCGGGCGCGCCTCCT---C---CTCGGCTCCTCCCCGCTTCGTCAAGCCGAAGACGGAGCCGGGGCTCG
CCGCCGTGAAGA---------------------------TGGAGCCA---------------------------GG----
-----------------GATCGACGACGCGGCGGCCT-TGAAGTGGGCGCGTGAAGACTGGGTGTG-GACGGAGCTGGAG
CGCCAGCATCGCGCCTTTGAGCAGTTCGCCGCTCGGCGCCGTGACCGCGACGAAGGAGGCGTCGTCGTTCT---------
---CAACGACGACGGCGAAAATGACGCGT---CG---CCACCGGTCCGCCAAGGCGACCCCGGGCAGGGGTCCAGCACGG
GTGGCCGCATGAAGGAGGAGAAGGACGACGAGGACA------AC------GGCGGC------GGCGACGGC---G-----
-GTGACTTCTCCTCCCTCAGCGCGTTATTTGGCCTGTAGTCGCGGCCTCTT-T---GTTT-TTTCTAA------GTATT-
---TTA-----TCTATGTA-A-AAAA-CTATTTCTGTTCGAGGAAGTAATGCACTG----------TTC----------C
GTCAAATA-TTTGTCCCGTTCGCCGAATTTTAGCCAACTAAATG--TTCGAAAAAAATTAAAAC-AGACGCCTGGGCCCG
ATCCTGGGGGCGTCGGCTGGGAACCCGGTCGCCCC-AGGTCGATTTT-AG--CGCCGGTTCTTCTCTAGGTGGCGATT--
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>chr3A_2
-ATCAACGA-GGCGGGCGCGCCTCCTCCTC---CTCGGCTCCTCCCCGCTTTGTCAAGCCGAAGACGGAGCCGGGCCTCG
CCGTCGTGAAGGCGGAGCCAGGGCTCGCTGACGTGAAGGCGGAGCCA---------------------------GG----
-----------------GCTCGACGACGCGGCGGCCT-TGAAGTGGGCATGCGAAGACTGGGCGCGCGACAGAGCTGGAG
TGCCAGCGCCGCGCCTTCGAGAAGTTCGCCGCTTGGCGCCGTGGCCGCGACGAGGGAGGCGTCGTCGTCCT---------
---AGACGACGACAGCGGCGACGAAGCGCAGTCT---CCGCCGGTCCGCCATGGTGACCCCGGACAGGGGTCCAGCAGTG
GCGTCTGCATGAAGGAGGAGAAGGATGACGACGACG------AC------GGCGAC------GACTG-------------
--TGACCTTGCCTCTCTCAGCGTGTTTTTCGGCCTGTAGCCGCGGCCTGCTTTG----TT-TTTTTAA------GTATT-
---TTA-----TCTATGTA-A-AAAA-CTATTTAAATTCACTGAGATAATGTAATG----------TTT----------T
GCCGAATA-TTTATCCCGTTCTCCAAATTTTAGACAGGTAACTGTTTTTAAAAAATTTAAAAAC-AGCCGCCCGGGGCCG
ACCCTGCGGGCGTCGGCTGGAAACCAGATCGCCCCTAGGTCGATTTTTAA--CACCGGTTCGCCCCCAGGCGGCAATATT
TCAAGCCGCCTGGGAGGCCAACGGCTGGAGATGCTCTTA-----------------------------------------
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>chr2B_9
--------AGGGCGGGCGCGCCTCCT---C---CTCGGCTCCTTCCTGCTTCGTCAAGCCGAAAATGGAGCCGGGGCTCG
CCATCCTGAAGACGGAGCCAGGGCTCGCCACCGTGAAGACGGATCCA---------------------------GG----
-----------------GCTCGACGACGCGACGGCCT-TGAAGTGGGCGAGCCAAGACTGGGCACG-GACGGAGCTGGAG
CGCCAGCATCGCCCCTTTGAGCAGTTCGCCACTCGGCACCGTGGCCGCGATGAGGGAGGCCTCATCATCCT---------
---CGACAATGACAGCAATGACGACACGC---CG---CCACCGGTCCGCCAAGGTGACCCCATGCAGGGGTCCAGCACGG
GCGACCGCATGAAGGAGGAGAAGGACGACGAGGACA------AC------GGCGGC------GGCGG---C---GACGAC
GGTGACTTCGCCTCTCTCATCGCGTTATTCGGCCTGCAGTCGTGGCCTCTT-T---GTTT-TTTCTAA------GTATT-
---TTA-----TCTATGTA-A-AAAA-CCATTTCAGTTCGCCGAGGTAATGTACTG----------TTT----------C
GCCGAATA-TTTGTCCCGTTCGCCAAATTTTAGTCAAATAAATG--TTCCAAAAAGTTAAAAAC-AGGTGCCTGGGGCCG
ACCCTAGGGGCGTCGGCTGGGAACCCGATCGCCCCGAGGCCGATTTT-AG--CGCTGGTTCGCCCCCAGACAACAATTTT
TCGAGCCTCCTAGGGGGCCAACGGTTGGAGATGCTCTAA-----------------------------------------
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>chr4D_11
----------GGCCGGCGCGCCTCCTCCTCGG---------CTCCCCGCGTCGTCAAGCCCAAGACGGAGTCGGGTCTCG
CCGCCGTGAAGACGGAGCCAGGGCTCGCCGCCGTGAAGACGGAGCCA---------------------------GGGCTC
GTCGGCGTGAAGGCGGAGCTCGACGACGCGACGGCCT-TAAAGTGGGCGCGCGAAGACTGGGCGCG-GACGGAGCTGGAG
CGCCAGCACCTCGCCCTAGAGCAGTTCGCCGCTTGGCGCCGTGGCCGCGACGAGGGAGGCGTCGTCCTCCTCAACGATGA
CAGCGACGACGACGT------------GC---CG---CCACCGGTCCGCCAGGGCGACCCCGGGCAGGGGTCCAGCAGGG
GCGGCCGCGTGAAGGAGGAGAAGGACGACGAGGACA------AC------GGCGGC------GACGA---C---GACGTC
AGCGACTTCGCCTCTCTCAGCGCGTTATTCGGCCTGTAGTCGCGGCCTCTT-GT--GTTT-TTTGAAGTATTT--TATT-
---TTA-----TCTATGTA-A-AAAA-CTATTTCAGTTCGCCGAAGTC---TACTG----------TTT----------C
ACCGAATA-TTTGTCCCGTCCGCCGAATTTTAATCGAATTAATG--TTCAAAAAAGTTTAAAAT-AGACGCCTGGAGGCC
GACCCTGGAGCGTCGGGTGGGAACCCGGTCACCTCCAGGCCGATTTT-AG--CGCCGATTCGCCCACAGGCGACGATTTT
TCGAGCCACCT--GGGGCCAACGGCTGGAGATGCTCTAAC----------------------------------------
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>chr2D_27
-----------------------------C---CTCGGCTCCTCCCCGCCTCGTTAAGCCGAAGAGGGAGCCGGGGCTCA
CCGCCGTCAAGACGGAGCCAGGGCTCGCCGCCCTGAAGACGGGGC-----------------------------------
-------------CGGAGCTCGACGACGCGGCGGCCT-TAAAGTGGGCGCG----------------GACGGAGCTGGAG
CGCCAGTGCCGCGCCCTAGAGCAGATCACAGCTCGACGTCGTGACCGCGACGAGGGAGGCGTCGTCGTTCT---------
---CGACGACGACGC------------GC---CGCC---ACCGGTCCGCCGGGGCGACCCCGAGCAGGGGTCCAGCAGGG
GCGGCCGCGTCAAGGAGGAGAAGGACGACGAGGACA------AC------GGCGGC------GACGG---C---G-----
-GCGACTTCGCCGCGCTCAGCGCGTTCTTTGTCCTGTAGTTGCGGCCTTTG-T---TTTT-T---TAA------GTATT-
---TACCTCCTTTGCTATGTA-AAAAACTATTTAAGTCGCCTAAAGTAATGTTATG----------TTTGCCGAATTTTA
GCCGAATC-CTTGTCCCTTTGGCCGAATTTTAGCCGAATTTTTG--TTCAAA-AACTTTAAATAAGGCGTCT--GGGGCG
ACCCTGGGGCCGGCGGCTGGGAACCCGATCGGCCCCAAGCCGATTTT-TT--CGCCGGTTCGCCCCCAGGCGGCGATTTT
ACGAGCCCCCCGGGGGGCCAACGGCTGGAAATGCTCTAA-----------------------------------------
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>chr3D_55
GAAGA---------------------------------------------------------------------------
------------CGGAGCCAGGGCTCGCCGCCGTAAAGACGGATCCATGGCTCGCCGGCGTGAAGACGGAGCCAGG----
-----------------GCTGGACGACGCGACGGCCT-TGAAGTGGGCGCGCGAAGACCGGGCACG-GACGGAGCTGGAG
CGCCAGCACCGCTCCTTTGTGCAGTTCGCCGCTCGGCGCCGTGGCCGCGATGAGGGAGCCGTCGTCATCATCGACGACGA
CAGCGACGACGACGC------------GC---CGCC---ACCGGTCCTCCAGGGCGATCCCAGGTAGGGGTCCAGCAGGG
GCGGCCGCGTGAAGGAGGAGAAGGACGACGAGGACA------AC------GGCGGC------GACGACGGC---A-----
-GCGACTTCGCCTCTCTCAGCACGTTATTCGGCCTGTAGTCGCGGCCTCTT-TG--TTTT-TTTCTAA------GTATT-
---TTA-----TCTATGTA-A-AAAA-CTATTTCAGTTCGCCGAAGTATGTACTG------------TT----------T
CCCCAATA-TTTGTCCCGTTCACCGAATTTTAGTCAAATAAATG--TTTAGAAAAGTTTAAAAC-AGGCGCCTGGGGCCA
ACCCTAAGGGCATCGGCTCGGAACCCGATCGCCCCCATGCCGATTTT-AG--CATCGGTTCGTCTTCAGGCGGCGATTTT
TCGAGCCCGCTGGGAGGCCAACGGCTGGAGAGCTCTTA------------------------------------------
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>chr5B_109
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-------GAAGACGGAGCCGGGGCTCGCCGCCGTGAAGAC----------------------------------------
----------------------------------------------------------TAGGCGCG-GACGGAGCTGGAG
CGCCAGCGACGCGCCTTTGAGCAGTTCGCCGCTCGGCGCCGTGGCCGCGACGAGGGAGGCATCGTCGTCCTCGACGACGA
CAACGACGACGACGC------------GC---CGCCGCCGCCGGTCCGCCAGGGTGACCCCGGGCAGGGGTCCAGCAGTG
GCGTCCGCGTGAAGGAGGAGAAGGACGACCACA------GCGGC------GGCGGC------AACGA---C---G-----
-GCGACCTCGCCTCTCTCAGCGCGTTATTCGGCCTGTAGTCGCGGCCTGTT-TG--TTTT-TT--TAA------GTATT-
---TTA-----TCTATGTA-A-AAAAACTATTTCAGTTCGCCGAGGTAATGTAATG----------TTT----------C
GCCGAATA-TTTGTCCCGTTCGCCGAAGTTTAGACAAATAAATG--TTGAAAAAAATTTAAAACCAGACGTCTGGGGCTG
ACTCTGAGGGCGTCGGCTAGGAACCCGATCACCCC-AGGCCGATTTT-AG--CGCCAGTTCGCTCCCAGGCGACGATTTT
TCGAGCCGTCTGGGGGGCCAACGGCTGGAGATGCTCTAATCCGG------------------------------------
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>chr7B_737
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---------------------------------TTAAACCGCCGGGCCTCCGCATTAAACACCCGCCTCTCTCTCTCTCC
TC-GGACCTCCGCCACGCGCCCCAGCCGTCGGAGAGAG-AAAACGCTTACAAAAGCACCGCGAATCTCAAGGTGG-AAAT
CCACCAATCCAATCGGACGAAAGAAAAGAG-AAA-TTCCCACCACCGACCGCGTCAC----GCGCGCGCACGCGCACCCG
CGCTGAAAACGGCCGACCGAC--CGCGCCCCGCGGCCAGCCGACGCGTCCTCGCGCGCATGCCGCCGCCCAGCCTGACCG
CCGCGAACGACCGGGTCGCCGCC---GCCTCCGCCGCGAACGGCCACGCGGGGCCGGACGCGCGCCGCCGCGCGGGCAAG
GGCAAGAAGGTCCACCCGCTGCCGGCCGACGGGGCCGCGATGGGGGACGGCGCCAGCGGCGGCGAGAGGCTGGCGGGCGG
GAGGAGGCCGATGGACTGGCTGTCGCCTGCCGGGGTCGCCGGCATCCTGCGGCGGCACCCGCTGCCGGTGCTGTTCGCGT
GCGGGCTGCTGCTCTTCATGGGCGTGGAGTACACCATCCCCATGGTCCCCGCCGCCGCGCCGCCGCTCGACCTCGGCTTC
CACGCCACCGCCGCCATGCACGCCGGGATCGCCGCCCGGCCCTGGCTCAACTCGCTCCTCGCCGCGCTCAACACGGTGAG
CGCACTTCCCTGCCACGCCTAGATCCGATCGGCGAACGAACCTTGCTTCTGCCGATCTAACCCATCCGCTCCAGTAATTC
CCAGCATTTTTTACCTTTCAC--TTTTGACCTGTCAATGTTACCCTCTCATTATCATTAACCAAACGTGAAGGCAACCTG
CGCTTTCGGTTGAGCAGAACGGGCTACATTGTAGCCACTCACACCAGAAAGTGGAAACTAGACACTAGACGACACTAACA
TCTCACAACTTTCACATGACC--ATATCTTCTCGTGCAGACTTTGATTACTTCTTCATAGTATTTTTCTAGATGGAATTT
GTTTCACAATTGTCC-------------------TCCTGTGCCTACG-TTTTTCTTCAGAACTTACACGCGCTGTGTCCA
CGCAGCAGTCTAATCCCAGTTTGAGCACTATTAAA----------------AATTGGTTAAAAATTTAATACGCGTCGCT
GGCAGTTGCACATCAACATATATCGCTTTAATTATAGGAATGATGATGTATAGGCTCTGGTACTGTGACAACAAGTGAAT
CTTTGTGAATTGT-----CACTCCTGGTGATGAGGGAAGCAAAAGTAGCTGGTATCCACAAATG-------CAAGAAACT
GACGAACGGTGTTTTATTTGGATGACCCGACGAACGGTGTTGGGTGGCTTGGCTCACCCAGAACC---------------
-----GATAAGATCAAGAATATCATCGTCATGCATTCTTCACATACCCATGGGTTTCCTGATAAGATACTGCATCTGGCC
AGATAGCTACCCGGTCCCCGCTCCAATTGCCACTAGTTGTTAGTGTTGCCATGACGGAATCCATCCTGAATGTGACGTGC
GATCTTCTCATGTGCAGGTGTTCGTCGCGATGCAGGCCGCATACATCCTGTGGGCCGTCCTCGCCGAGCAGCGGCCCCGC
GCCGCCATCGCCACGCTCATGATGTTCACCTGCCGCGGCCTGCTCGGCTGCTCCACGCAGCTGCCCCTGCCGGCGGAGTT
CCTGGGCTCCGGGATGGACTTCCCCGTGGGGAACGTGTCCTTTTTCCTCTTCTATTCTGGGCACGTCGCCGGCGCGGTGA
TCGCGTCCATCGACATGCGCCACGTGGGACGGCGCAGGCTGGCGGTGCTCTACGACACGCTCAACCTGCTGCAGTTCGTC
AGGTTGCTTGCGTGCAGAGGGCATTACACCATTGACCTGGCCGTCGGCGTCGGCGCCGGTCTCCTCTTCGACATGCTCGC
CGGCTGGTACCTGGACAGCAAGAACGTCGACAGCGGCGACAACCGTTGCTGCAGCAGCTGCCAGAAGGCTCTCGTCTCAC
AGAAGCTTACATCATAGGCCTATCAATGGCCGTGGAATTGCAGTGGACTGGACATGATCCAAGTCATTTTCTAGATTGCT
ACTTACTGATATGTAATTGTGTAACTGTGTTTGTCCTATG-----TAAGTTGCAACATCTTCTGAAATGCAAGTATCAGA
ATTCAGAAGCTTAAAGTACATCACAAGACAGGAATCAGCACAGGAACCAAGCTGCGAAGTGGCAAGTGGCAACAGATGGC
AAAGGTCAAGATGCACCATTTATTTCTGATTGAAGGGTGGTACTCTCAAGATTATTTTTGCACCCATGTTACAGGATGAT
TTACTCCTAGCTTAGAGGACATACATACGACAGTACATTGCCAAAGTATACAACAGGTGAATAGGTGGTTATTTCTATCT
AGTATACATTGGTTGCTTCTTCTACCTCAGTCTTGCGCCATGGAACTGGTCACCCCGCAAACAACAGCAGGCTGGTCAAG
CAAACATCGCAAACACCGAAATGGATCATCAGTTTCATCACAGCAACACACATCTGTCGTGCCACGCCGCTGATATCTTA
CACGGACACCGTTATTTATGGTCGCCATCGGCAGACCCATTCTGTTCACCAAGCTTGTGAAACTCGGCCTGGATGACCTC
CACAATCATGGCGTCATCGGGGTCTTGGTCGGGGATGTCTACATGCAAAGAACCCTGCTTGATGAGTTCCTGATTCAGCG
CCTGCTGCTCGATGTAATGGTAGAGCTCTTGGTGGAAAGGGTGGTCAAGCGAGAAGCAGTCATCGACGCTGCTCAATGGA
ACTTTTGATGAACCCTCACGTCGACAGAAATGGGGGATGGAGGAATGGTCCATGATCTGCAAAGTCCAAATAAATGGCCC
ATGGAGGTCTTATTCTCGTATCACTCTTGCTTAATTGGAGTGCAGTAATGTCTTGATGAGCAACGAATGATGAAAATAGC
ACTAGCAAGTAATCTTACCTTTAGGAGCTCATCTTTCCCACGACCACTCAAAACATGGACCTTCTTTCTTGTCCTCT
>chr7D_755
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---------------------------------------------------GCATTAAACACCCGCCTCCCTCTCC--CC
TCGGGACCTCCGCCACGCGCCGCAGCCGTCGGCT-GAAAAAAACGCTTACAAAAGCACCGCGAATCTCAAGGTGGGAAAT
CCACCAATCCAATCGGACGAAGGAAAAGAG-AAAATTCCCACCACCGACCGCGTCAC----GCGCGCGCACGCGCACCCG
CGCTGAAAACGGCCCACCGCC--CACGC------GCCAGCCGACGCGTCCTCGCGCGCATGCCGCCGCCCAGCCTGACCG
CCGCGAACGACAGGGCCGCCGCC---GCCTCCGCCGCGAACGGCCACGCGGCGCCGGTCGCGCGCCGCCGCGCGGGCAAG
GGCAAGAAGGTCCACCCGCTGCCGGCCGACGGGGCCGCGATGGGGGACGGCG---------GCGAGAGGCTGGCGGGCGG
GAGGAGGCCGATGGACTGGCTGTCGCCTGCCGGGGTGGCCGGCATCCTGCGGCGGCACCCGCTGCCGGTGCTGTTCGCGT
GCGGGCTGCTGCTCTTCATGGGCGTGGAGTACACCATCCCCATGATCCCCGCCGCCGCGCCGCCGCTCGACCTCGGCTTC
CACGCCACCGCCGCCATGCACGCCGGGATCGCCGCCCGGCCCTGGCTCAACTCGCTCCTCGCCGCGCTCAACACGGTGAG
CGCACTTTCCTGTCTTGCCTAGATCCGATCGGCGAATGAACCTAGCTCCTGCCGATCTA----ATCTGCTCCAGTAATTC
CCAGCATTTTTTACCTTTCAC--TTTTGACCTGCCAATGTTACCCTCTCATTG------ATCAAACGTGAAGGCAACCCG
CGCTTTCGGTTGAGCAGAACGGGCTACATTGTAGCCACTCACACCAGAAAGTGGAAACTAGACACTAGACGACACCAACA
TCTCACAACTTTCACATGACCATATGTCTTCTCGTGCAGAGTTTGTTTACCTTTTCATG---TTTTTCTAGGTGGAATTT
GTGTCACATTTGTCT-------------------TCCTGTGTCTACATTTTTTCTTGAGAACTTTCACGCGTGCTGTCCA
CGCAGCAGTCTAATCCCAGTTTGAGCACTACTAGTACCCCCATATTT--ACAATTGGTTAGAAATTTAATACGCGTCGCT
GGCAGTTGCACATCAACATCTATCGCTTTAATTATAGGAATGATGATGTATAGCCTCTGGTACTGTGACAACAAGTGAAT
ATTTGTGAATTGT-----CGCTCCTGGTGATGAGGGGAGCAAAAGTAGCTGGTATCCCAAAATG-------CAAGAAACT
GACGAATGGTGTTTTATTTGGATGACCCGACGAACGGTGTTTGGTGGCTTGGCTCACCCAGAACC---------------
-----GATAAGATCAAGAATATCATCGTCATGCATTCTTCACATACCCATGGATTTCCTGATAAGATACTGCATCTGGCT
AGATAGCTACCCGTTCCCCGCTCCAATTGCCACTAGTTGTTAGTGTTGCCATGACGGAATCCATCCTGAATGTGACGTGC
GATCTTGTCATGTGCAGGTGTTCGTGGCGATGCAGGCCGCATACATCCTGTGGGCCGTCCTCGCCGAGCAGCGGCCGCGT
GCCGCCATCGCCACGCTCATGATGTTCACCTGCCGCGGCCTGCTCGGCTGCTCCACGCAGCTGCCCCTGCCGGCGGAGTT
CTTGGGCTCCGGCATGGACTTCCCCGTGGGGAACGTGTCCTTCTTCCTCTTCTACTCCGGGCACGTCGCCGGCGCGGTGA
TCGCGTCCATCGACATGCGCCGCGTGGGACGGCGCAGGCTGGCGGTGCTCTACGACACACTCAACTTGCTGCAGTTCGTC
AGGCTGCTTGCGTGCAGAGGGCATTACACCATTGACCTGGCCGTCGGCGTCGGCGCTGGTCTCGTCTTCGACATGCTTGC
CGGCTGGTACCTGGACAGCAAGAACATCGACAGCGGCGACAACCGTTGCTGCAGCAGCTGCCAGAAGGCTCTCGTCTCAC
AGAAGCTTACATCATAGGCCCATCAATGGCTGTGGAATTGCAGTGGACTGGACATGATCCAAGTCATTTTTTAGAATGCT
ACTTACTGATATGTAATTGTGTAACTGTATTTGTCCTATG-----TAAGTTGCAACATCTTCTGAAATGCAAGTATCAGA
ATTCAGAAGCTTAAAGTACATCACAAGACAGGAATCAGCACAGGAACCAAGCTGCGAGGTGGCAAGTGGTAACAGATGGC
AAAGGTCAAGATGCACCATTTATTTCTGATTGAAGGATGGTACTCTCAAGATTATTTTTGCATCCATGTTACAGGATGGT
TTACTCCTAGCTTAGAGGACATACATATGACAGTACATTGCCAAAGTATACAACAGGTGAATCGTTGGTTATTTCTATCT
AGTATACATCGGTTGCTTCTTCTACCTCAGTCTTGCGCCATGGAACTGGTTACCCCACAAACAACAGCAGGCTGGTCAAG
CAAACATCGCAAACACCGAAATGGATCATCAGTTTCATCACAGCAACACACATCTATTGTGCCAAGCCGCTGACATCTTA
CACGAACACCGTTATTTATGGTCGCCATCAGCAGACCCATTCTGTTCACCGAGCTTGTGAAACTCGGCCTGGATGACCTC
CACAATCATGGCATCATCGGGGTCTTGGTCGGGGATGTCTACATGCAAAGAACCCTGCTTGATGAGCTCCTGGTTCAACG
CCTGCTGCTCGATGTAATGATAGAGCTCTTGGTGGAAAGGGTGGTCGAGCGAGAAGCAGTCATCGACGCTGCTCAACGAA
GCTTTTGATGAACCCTCGCGTCGACAGAAATGGGGGATGGACAAATGGTCCATAATCTGCATAGTCCAAATAAATGGTCC
ATGGAGGTCTCATTCTCTTATCTCTCTTGCTTAATTATAGTGCAATAATGTCTTGATGAGCAACGAGTGATGAAAATAGC
ACTAGCAAGTAATCTTACCTTTAGGAGCTCATCTTTCCCACGACCACTCAAAACATGGACCTTCTTTCTTGTCCTCT
>SNPs
------S-----------S-------------------------------------------------------------
--------------------S-----------------------------------------------------------
---------------------------S--S-------------------------------------------------
-----S----------------------S---------------------------------------------------
----------S---S--------------------------------------------------------------S--
-----------------------------------------------------------------------SSS------
----------------------------------S-------------------SS------------------------
-------------------------S-----------------S------------------------------------
----------------S---S----------------------S-------------------------SS---------
-----------------------------S----S-S-------------------------------------------
----------------------------------------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S-------------------------S---
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--S---------------------------S--------------------------SSSS-------------------
---------------------SS---------------------------------------------------------
-----------------------SSS------------------------------------------------------
--------------------------------S--------------------SS-------------------------
---------------------------SS---------------------------------------S-----------
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--------------------------------------S-----------------------S-----------------
-------------------------S--------------------------------S---------------------
------S-----S--S--SSSSS---------S-SS---------------S--------------------------S-
-------S------------S-----------------S--------------------SS---SS--------------
------S-S------S-S-----S------S--------------S-SS-------S----------S------S-----
--S--------SS-SSSSSSSSSSSSSSSSSSSS-----SS----S-----SSS--------------S-S-------SS
--S------S---------------------------S-S-S-----SS-------S-S---------------S---S-
---------------------S-S-------------------------S------------S-----------------
-------------SSSSS------S----S--------------S---------S---S---SSSSSSSSS---------
--S-------------------------------------------SSS-S--------SS--S-SSSSSSSSSSSSSSS
SSSSS---------------------------------S-----------------------------------------
---------------------------------------S------------------------S-----------S---
--S-S---------------------------------------------------------------------------
-----------------------------------S-----------S--------------------------------
------------------------------------------------------------------------S-------
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-----------------------------------------------S--------------------------------
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------------------S-------------------------------------------------------------
-------------------------------------S--SSSSS-----------------------------------
------------------------------------------------------S-------------------------
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---------------------------------S----------------------------------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------------------S--------------
-----------------S--------------------------------------------------------------
---------------------------S--------------S-------------------------------------
------------------------------------------------------------------S-------------
-----------------S--------------------------------------------------------------
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---------------------------------------------------------S-------------------
>forward_865
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---------------------------------------------ACGTGTTCGCAGGCTCTAAA---------------
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>reverse_2483
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--CCCTCTCATGTGCAGGTGTT----------------------------------------------------------
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>forward_1626
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------TCCCTGCCATGCCTAGATCT------------------------------------------------------
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>reverse_3175
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------------------------------------------------------GGAAGTGGCAACAGATGGCA------
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