>input_sequence_44560
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-----------------------------------------ATGGCGCAGAGGGCGGCGGGCGCGCTTCTCCGGCGGTCC
CTCGGG------CTCGCGCCGCCGGCGGCCCCGAGGGCGCTGAGCACCAGCGCCGCGGCGCCGGCCGCGGCG------GC
GGAGGGAGAGGCCGCGGCTGCCAAGGCGAAGAGGAGCAAGAAGAAGAACCTGTTCGACGTGGTGCAGTTCCTGCCGGACT
GGGGCGTCGGCTACAAGGTCGCCAAGACCACCTGGCGCGACGTCTCCTACCAGATCACCAAGATCAACCTCTACAAGGTC
AGCATCCTTCTCGCTCATCCACAC-------------GAAATTAATCTC--------TTGTATCCATCTCCATAACTTTG
TTGTGGTTCGTTGATCT------------GTGTAGGATGGCCGCCACGGGAAGGCGTGGGGGATTCGGCACAAGGCCGGT
GAGTCTCTGCTCTC--CCCTGCTTAATGTTGCCCCCCTGATTGATTTGTAAGGCAATGCGGAAGTTGAAGATCGATGTCG
CTGTGCTGTTCTTGA-----------------------------------------------------------------
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----------------------------------------------------------------ATGAATGATGCCCGTT
AATTGGTAGTTTGGTCGAGTGTTAAGAGATTCGACAAGGTCGCAGGGTGGAATGGTAGTTTGGCCCCTGGATGGAAAACT
ACTTATGCTGCGCGTCAATATGTGCAGTTGTGTGCACTAGTA-----------TCTGATTCTGGTTGTTTGCAGCTTGTC
TTCGTCGATTTAATTTGGTTATGCTTGATCATTCTGATTCCGGATGACATTGTTACAGTGGTTTGTAGTTGTTGTCTTGA
TTAGTT-AGTTTGATATTTATGCAGTGGAGTGAGTTTAGGGCTTTA----------------------GGTAAGGTAACA
ATATATTTCCTTGCTCAAATACTTGATGTGGATATGCAATGTGACTGACAATTCCTAGCTGTGCATAC-------TGTAG
ACTGTAGTGTATGGTACATTTCCTGGGGCATCGTAATGCCTTACCAAGTAGCAATTGTATGAAGATACTCGACGACACAA
AAGCTAGCATGAATGCCAGTTTAATCAGGTCTTAATGGATCCATGACTTACAATCGACA--ATTTTCAACATCGCAAACA
AATCATTCCTGACGAGTAACTAACTACTACCGTGTTAATGTTACAGGGATGATATGATTCCTCCACTAGCCTAGATGTTA
TATAAATTCTGATTAATATGGAACTTCATGTCGTATGTGCCTCTCTTTCATTAACATGGAAGATTCTACACCGACTTCTT
CTTTGAATTAGACAGGCAGTTGATATGGCCTCCAAAAGG-----AAGAAAAAAAGTTTGCTCCGTCTC-ATGTTCAGTGC
CGTGCCAA-ATATTCAGTTGTTTGCTGCCCCAGTTACCCCAAGCTATTCTCTTTTCCTTTTCATATATGTCAAG------
--ATCAGATAGATAGAAGGTGTTATTAACTGCCCTTTGATCATGTTTCCATGTTGCTGTTTGCACATGTAGAAACCTGCC
ACGGCGTTAGGCTTACTGGGTCAGAAGGCATACCCATGTTCCCAAACCATGTAGAAACCTGCCAGGCTGCCACACACAC-
---------------------------------------------AGACACTTAGCATAGTTGAATAAGTAACCGATGTC
AGGATTATTTTCACCAGGTGAGGGATTCCTCACTTTAGCTGATCTAT--GTTTCTCTTGCAGGTGTGCAAGTTGCTGACG
CTCCGATAAAACTCAGCGGAGTGAACAAGCGTGGTTGGAAGTACATAAAGGCATCGCAGAAGACGGTGCAGGATATCCCC
GCAGCTGAGACGCCAGCCGCTGCCACTGCCACTGCCACTGCCACTGCTTAA-----------------------------
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>chr6D_1_TraesCS6D01G024500
GACATCTGTTGCAAAAAGCTTTGCAACAAGAGCTTTACTGCAAAAAAAAATCTGCAACATAACCTTTGTTTCAAATGTTT
CTGCAATGAGACTTGTGCTGCAAAAGGATTCTCCCAACAGGACTT--CTATTGCAAAAGTGACGACGACGCTTGGCTAGG
AAATTGCGTCAGATCGGACGGCTCTTA----------------------------AAAAAGATCCGCCGGCCGACGTGTA
GCCCGGCCTTTAATTTATTGATTACTATTCCCGATGGTACTTTGTGTAGTCAACTGTTGTTTTTTTTAATCTCAAATGTA
TTTGTGTCATTGCGGAAAAAAATTCATTAGAAATACTCAAATGACTGTTACTCTTAAAATTTACTCCCTCCGTAAAGTAA
TATAAGACGTATTAAAATAAAGTCAAATTGTATCTGAACTCAAATGACTATTACTCTTAA---AACTCAAATTGAATTTG
AACTCAATTGTATTCGTGTCATTTCAGAAGAAAAAAAATGTTCATTAGAAAAAAATAAATGACCGTTACTCTTAAAATTT
ACTCTCTGTGTAAAGTAATATAATATGTATTAAAATAAATTCAAATTGTATTTGAACCCAGATGAC--TATTACTGTTAA
ATAAACTCAAATTGAATTAGAACTCAATGGTTT-ATGCAAAAAATTAGTATACTCAAATGATTTAGCATAAAATCAAATT
TGAACTAAAACCACGACACTTATTTTGGATCGGAG-GGAGTACTATTTATGGAAGGATTTAGTGAAAATTATTCAAAGCC
AAAGTTGTTTCAAAATTGGGACTGTTCCTTT---------TTTTTTAGAACAGCACTAGCGTTCTTTGCAAACCAGAGTG
TAGCGCGCGGCCCAGATCAACCGAAGCCAGCCAGCCCACTCGACGGCATTCTC--CTCCGGCAAGCTCCGCGCGGAACCC
TAGCTAG-CCCCGCCG---------GCCGCCGCCGCCCCTCTCCCGTCCACACTCCACCCGCCGG-GCTCGCCTCCTCCA
CCTCGCGA----------------------CACCGGCAGCCATGGCGCAGAGGGCGGCGGGCGCGCTTCTCCGGCGGTCC
CTCGGG------CTCGCGCCGCCGGCGGCCCCGAGGGCGCTGAGCACCAGCGCCGCGGCGCCGGCCGCGGCG------GC
GGAGGGAGAGGCCGCGGCTGCCAAGGCGAAGAGGAGCAAGAAGAAGAACCTGTTCGACGTGGTGCAGTTCCTGCCGGACT
GGGGCGTCGGCTACAAGGTCGCCAAGACCACCTGGCGCGACGTCTCCTACCAGATCACCAAGATCAACCTCTACAAGGTC
AGCATCCTTCTCGCTCATCCACAC-------------GAAATTAATCTC--------TTGTATCCATCTCCATAACTTTG
TTGTGGTTCGTTGATCT------------GTGTAGGATGGCCGCCACGGGAAGGCGTGGGGGATTCGGCACAAGGCCGGT
GAGTCTCTGCTCTC--CCCTGCTTAATGTTGCCCCCCTGATTGATTTGTAAGGCAATGCGGAAGTTGAAGATCGATGTCG
CTGTGCTGTTCTTGA-----------------------------------------------------------------
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----------------------------------------------------------------ATGAATGATGCCCGTT
AATTGGTAGTTTGGTCGAGTGTTAAGAGATTCGACAAGGTCGCAGGGTGGAATGGTAGTTTGGCCCCTGGATGGAAAACT
ACTTATGCTGCGCGTCAATATGTGCAGTTGTGTGCACTAGTA-----------TCTGATTCTGGTTGTTTGCAGCTTGTC
TTCGTCGATTTAATTTGGTTATGCTTGATCATTCTGATTCCGGATGACATTGTTACAGTGGTTTGTAGTTGTTGTCTTGA
TTAGTT-AGTTTGATATTTATGCAGTGGAGTGAGTTTAGGGCTTTA----------------------GGTAAGGTAACA
ATATATTTCCTTGCTCAAATACTTGATGTGGATATGCAATGTGACTGACAATTCCTAGCTGTGCATAC-------TGTAG
ACTGTAGTGTATGGTACATTTCCTGGGGCATCGTAATGCCTTACCAAGTAGCAATTGTATGAAGATACTCGACGACACAA
AAGCTAGCATGAATGCCAGTTTAATCAGGTCTTAATGGATCCATGACTTACAATCGACA--ATTTTCAACATCGCAAACA
AATCATTCCTGACGAGTAACTAACTACTACCGTGTTAATGTTACAGGGATGATATGATTCCTCCACTAGCCTAGATGTTA
TATAAATTCTGATTAATATGGAACTTCATGTCGTATGTGCCTCTCTTTCATTAACATGGAAGATTCTACACCGACTTCTT
CTTTGAATTAGACAGGCAGTTGATATGGCCTCCAAAAGG-----AAGAAAAAAAGTTTGCTCCGTCTC-ATGTTCAGTGC
CGTGCCAA-ATATTCAGTTGTTTGCTGCCCCAGTTACCCCAAGCTATTCTCTTTTCCTTTTCATATATGTCAAG------
--ATCAGATAGATAGAAGGTGTTATTAACTGCCCTTTGATCATGTTTCCATGTTGCTGTTTGCACATGTAGAAACCTGCC
ACGGCGTTAGGCTTACTGGGTCAGAAGGCATACCCATGTTCCCAAACCATGTAGAAACCTGCCAGGCTGCCACACACAC-
---------------------------------------------AGACACTTAGCATAGTTGAATAAGTAACCGATGTC
AGGATTATTTTCACCAGGTGAGGGATTCCTCACTTTAGCTGATCTAT--GTTTCTCTTGCAGGTGTGCAAGTTGCTGACG
CTCCGATAAAACTCAGCGGAGTGAACAAGCGTGGTTGGAAGTACATAAAGGCATCGCAGAAGACGGTGCAGGATATCCCC
GCAGCTGAGACGCCAGCCGCTGCCACTGCCACTGCCACTGCCACTGCTTAATTCGTTACAGGCTAGAGCATTTAGAAGGT
GGCAAAACTTGTTCCTGTAGAAGCGTAGCGTTGAACTGTTGAGACGATTGGTTGATCTGCCATCT-CCACTCTTTCATAG
GTTCTCATGCTTTCCAGGGTTTTAGGCATAGTTGAAAGGGTTTTCATGTGACCCCGGATTGCCACGTCGGCCATGCTTTG
TCGTCGAAGCTAAAGATGATGTAGCCGTCAAAAACATTTGTTTTGCA-----TTTTTACGTTTTTGCAATGCCTCGTTTC
CATCAGAAGGAACAAGTGCGTCGCCTCGACATTAGTTTGGTTGG-GTGGA--TCATGTAATAAAAGTTTATTCTTGCTCT
GTA-------TTTTTTATGAACAAGGATTCTTGCTCTGTTAAGACTCTGGGACAGGGTAGCAGTTAACATACT--GCATC
TGTTTCTTCATGCACTTTAGAGTGACGATTACCTGAAGTGATCCACAAATTTAGCTCAGTAGCCCAAGCGAATGCAACTG
TGCATTGTTAGCCACTTTGGAGCTCCCAAACTCATCCGAAACAAAAATAACATCCCTTCCTACAAAACCAAGCAATGAGA
AGAGTGGTCAGAAGAACGAAACCAATCTTTTACGGAAAAACATAAAAGTGCTAGTAATAAGATGAAAAAGAATCATTTCA
GTGCAGTGTTGTTAGATGAAAGTGCCACATCAAAGTTCAACAGACAAGCTATTCCTATTCTACATGGATAGAAAACTGTC
TAATTACTCCCTCCGTTTCTAAATATTTGTCTTTCTAGAGATTCCAACAAGTAATTACATACGGAGCAAAATGAGTGAAT
CTACACTCTAAAATATGTCTATATACATCCGTATGTGGTAGTCCATTTGAAATCTCCAAAAAGACAAATATTTAGGAATG
GAGGGAGTACATCCTAAGATACAACATCTACCAATACCTTTTTTTTCCGGCAAAACATCTACCAATACCCACACAGTGCA
ACTATGCAATTTCAAAATATTTCATATAA
>chr6A_1
GACATCTACTGCAAAAAGCTTTGCAACAAGAGCTTTGTTGCAAAAAAGTATATGCAAAATAACATTTGTTTCAAATGTTT
CTGGAATGAGACTTGTGCTGCAAAAGGATTCTCCCAACACGACTT--CTGTTGCAAAAGTGACGACGACGCTTGGCCAAG
-AATTGCGTCAGATCGGACGGCTCTTAGACTGGC----------------------------TCCGCCGGTCGACATGTA
GCCCCACCCTTAATTTATTGATTACTATTCCCGATGGTATTTTGTGCAGTCAATTGTTGTTTTCTTTTATCTCAATTGTA
TTTGTGTCATTGCGAAAAAA---TCATTAGGAAAACTGAAATGACTGCCACTCTTAAAATTTAATCCCTTTGTAAGTTAA
TATAAGATGTATTAAAACAAATTCAAATTGTATTTGAACTCAAATAGCTATTATTCTTAAATAAACTCAAATTGAATGTG
AACTCAATTGTATTTGTGCCATTCC-GAAAGAAAATAATGCTCATTAGAAAAACTGAAATGACAGTTACTCTTAAAATTT
ACTCGCTCTGTAAAGTAATATAAGACATATTAGAATAATTTCTAAATTTATTTTTACTC------------------TAA
ATAAACTCAAGCCGAATTTGAACTCAAAGGTTT-ATTCAAAAATTTAATAAACTCAAATTCA------------------
--AAGTAAAACCACAGCACTTACTTTTGATCGGAG-GGAGCATTATTTATGCAAGGATTTAGTAAAAATTATTCAAAGTC
AAAATTGTTTCAAAATTGGGACTGTTCTATT---------TCTTTTAGAAC---------------TGCAAACCAGAGTG
CACCGAGCGGCCCAGATCAACCGAAGCCAGCCAGCCCACCCGACGGCATTCTCCCCTCCGGCAAGCTCCGCGCGAAACCC
TAGCCAG-CCCCGCCGGCCGCCGCCGCCGCCGCCGCCCCCCTCCCGTCCACGCTCCACCCGCG-----------------
---------ACTTCCCGAGGCCACTCCGGCCACCGGAAGCCATGGCGCAGAGGGCGGCGGGCGCGCTTCTGCGGCGGTCC
CTCGGG------CTCGCGCCGCCGACGGTCCCCAGGGCCCTGAGCACCAGCGCCGCGGCGCCGGCCGCGGCC--------
-GAGGGAGAGGC---GGCGGCCAAGGCGAAGAGGAGCAAGAAGAAGAACCTGTTCGACGTGGTGCAGTTCCTGCCGGACT
GGGGCGTCGGCTACAAGGTCGCCAAGACCACCTGGCGCGACGTCTCCTACCAGATCACCAAGATCAACCTCTACAAGGTC
ATCATCCTTCTCGCTC---------------------GAAATTAATCTCTTGTATGTTTGTATCCATCTCCCTAACTTTG
TTGTG--------ATCC------------ATGTAGGATGGCCGCCACGGGAAGGCGTGGGGGATTCGGCACAAGGCCGGT
GAGTCTCTGCTCTCTCCCCTGCTTAATCTTG--CCCCTGATTGATTAGTAAGGCGATGCGCAGCTTGAAGATCGATGTCG
CTGTGCTGTTCTTGACTGAATGATGCCCGCTAATTGGTAGTTTGGTCGAGTGTGAGAGATTCGACAAGGTCCCCGGTGAA
ATGGTAGTTTGACCCCGGGGCATCAATCTCTGCAGTTGTGTGCACTGGTATCTGATGTCGCCGGTGTCAATAGTTTAATA
TCCCCCTGAGCGATTAGTAAGGCGATGCGCGATTTGAAGATCGATGCCGCTGTGATGCTCTTGAATGAATGATGCCCGTT
AATTGGTAGTTTGGTCGGGTGT-GAGAGATTCGACAAGGTCGCAGG-TGGAATGGTAGTTCGGCCCCTGGATGGAAGACT
ACTTATGCTGCGCATCAATATGTGCAGTTGTGTGACATTAAACTATTGATCATTCTGATTCTGGTGGTTTGCAGATTGTC
TTCGTCGATTTAATTTGGTTATGCTTGATCATTCCGATTCCGGATAACATTGTCGTGGTGGTTTGTAGC---TGTCTTGA
CTAGTC-AGTTTGATATGTATACAGTGCAGTGAGTTTAGCGCTTTATGAAGATACCCGACGCTAGTCAGGAAAGGTAACA
ATAGATTTCCTCGCTCAAATACTTGATGTGGATATGCAATGTGACTGACAATTCCTAGCTGTGCATACTGTAGAGTGTAG
ACTGTAGTGTATGGTACATTTCCTGGGGC----TAATGTCTTACCAAGTAGCAACTTTATGAAGATACCCGACAACACAA
AAAC--GTACGCTTGACAGTTTAACCAGGTTTAAATGGATGCATGAAATACAGTCGGTATGATTTTCAACATCGCTAACA
AATCATTCCTGACAAGTAACTGACCACTATCGTGTTAATGTTATAGAGATAATATGATTCCTCCATTAGGTTAGATGTTA
TATAAATTCTGATTAATATGAAACTTCATGTTGTATCTGCCTCTCTTTCATTAACATGGAAGATTCTACACCGACTTCTT
CTTTGAATTAGACAGGCAGATGATATTGCCTCCAAAAGCAAAAAAAAAAAAAAAGTTTGCTCTGGCTC-ATGTTCAGTGC
TGTGCCAAAATGTTCAGTTGATTGCTGCCCCGGTTACCCCAAGCTATTCTCTTTTCCTTTTCATATATGTCAAG------
--ACCAGATAGAT---AGGTGTTATTAACTGCCCTTTAATCATGTTTTCATGTTGCTGTTTGCACATGTAGAAACCTGCC
ACACACATATAACTTAA-----------------CATGTTCCCAAACCATGTAGAAACTTGCCA--------CACACATA
GAACATGACATAGCTGA----------------------------------------------AATAAGTAATCGATGTC
AGGATTATTTTCACCGGGTGAGGGATTCCTCACTTTAGCTGATCTAT--GTTTCTCTTGCAGGTGTGCAAGTTGCTGACG
CTCCAATAAAACTCAGCGGAGTGAACAAGCGTGGGTGGAAGTACATAAAGACGTCAGAGAAGACGGTGCAGGATATCCCC
GCAGCAGAGACGCCAGCTG------------CTGCCACCTCCACTGCTTAATTCATTACAGGCTAGAACATTT-GAAGGT
GGCAAAACTTGCTCCTGTAGAAGTGTAGCATTGAACTGTTCAGATGGTTGGTTGATGTGCCATCT-CCACTCTTTCGTAG
TTTC-CATGCTTTCCAGGGTTTTAGGCATAGTTGAAAGGGTTTTCGTGTGACCCTGGATTGTCATTCACGCCACGCTTTC
TTGTTGAAGCTAAAGATGATGTAGCGCCC-AAAACATTTGTTTTTTTTATTTTTTTTACATTTTTGCAATGCTGCATTTC
CATCAGA---AACAAGTGTGTCGCCTTGACATTAGTTTGGTTGG-GTGGATCTCATGTAATAAAAGTT------------
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>chr6B_1
GACATTTGTTGCAAAAATCTTTGCAACAAGAGCTTTGTTGCAAAAAATA-----CAACATAATCATTGTTTCAAATGTTT
CTGCAACGAGACTTGTGCTGCAAAAGGATTCTCCCAACACGACTTTTCTGTTGCAAAAGTGACGACGATGCTTGACCCGG
AAATTGCGTTAGTTCAAACGGCTCTTAGACCAGTGGATCTTTTATGATCCGCCTTAAAAAGATCCGCAGGCCGACGTGTA
GCCTGGCCCTTAATTTATTGATTACTATTCCTGATGGTATTTTGTGCAGTCAGCTG-----TTTTTTTATCTCAATTGTA
TTTGTGTCATTGCGAAAAAAA--TCATTAGAAAAACTCAAATGACTGTTACTCCTAAAATTTACTCC-TCCGTAAAGTAA
TCTC---------AAAATAAATTCAAATTGTATTTGAACTCGAATGACTATTACTCTTAAATAATCTCAAAATGAATTTG
AACTCAATCGTATTGGTGTCATTCC-GGG---AAACAATGTTCATTAGAAAAACTCAAATGGATGTTACTCTTAAAATTT
ACTCCCTCTGCATAGTAACATAAGACGTATTAAAATAAATTCAAATTGTATCTGAACTCAGATGACTATATTACTCTTAT
ATAAACTCAAATTGAATTTGAACTCAAAGGTTTTATGCAAAATGTTAATAAACTCAAATGATTTAGCATAAAATAAAGGT
TGAACTAAAACCACGACACTTATTTTGGATCGGAAGGGAGTATCATTTATGCAAGGATTTAGTAAAATTTGTTCGAAGTC
AAAGTTGTTCCAAAATTGGGACTGTTCTCTTCTCTTTTTTTTTTTTAGAACTGCACTAGCGTTCTTTGCAAACCAGAGTG
TAGCAAGCGGCCCAGATCAACCGA--------AGCCCACTCGACGGCATTCTC--CTCCGGCAAGCTCCGCGCGAAACCC
TAGCCAG-CCCCGCCGG---CCGCCGCCACCGCCGCTCCCCTCCCGTCCACGCTC-------------------------
--------------TCAAGGCCACTCCGGCCACCGGAAGCCATGGCGCAGAGGGCGGCGGGCGCGCTTCTCCGGCGGTCC
CTCGGG------CTCGCGCCGCCGACGGCCCCCAGGGCCCTGAGCACCAGCACCGCGGCGCCGGCCGCGGCG------GC
GGAGGGAGAGGCCGCGGCTGCCAAGGCGAAGAGGAGCAAGAAGAAGAACCTGTTCGACGTGGTGCAGTTCCTGCCGGACT
GGGGCGTCGGCTACAAGGTCGCCAAGACCACCTGGCGCGACGTCTCCTACCAGATCACCAAGATCAACCTCTACAAGGTC
CTCATCCTTCTCGCTCATCCACAC-------------GAAATTAATCTC--------TTGTGTCCATCTCCCTAACTTTG
TTGTGGTTCGTTGATCC------------GTGTAGGACGGCCGCCACGGGAAGGCGTGGGGGATTCGGCACAAGGCCGGT
GAGTCTCTGCTTAATGC--------------CCCCCCTGATTGATTAGTAAGGCGACGCGCA-CTTGAAGATCGATGTTG
CTGTGATGTTCTTGTACTCCCTCCGTTCACTTTTATAGTTCGTTTCAGACAACTGCAGATGAGCTATTTTGCACCCTGTC
TGAAATGTCTTCAAGGCCTTATAA--------------------------------------------------------
----------------------AAGAGAACAGAGGGAGT-------------------------ATGAATGATGCCCGTT
AATTGGTAGTTTGGTCGAATGT-AAGAGATTCGCCAAGGTCCCCGG-TGGAATTGTAC----------------------
ACTTATGCTGCGCATTGATCTGTGCAGTTGTGTGCACTAGTA-----------TCTGATTCTGGTGGCTTGCAGCTTGTC
CCCCTCGAATTAATTTGGTTATGCTTGACCATTCCGATTCAGG-TGACATTGTCACGGTGGTTTGTAGT---TGTCTTGA
TTAGTT-AGTTTGATAT-TATGCAGTGCAGTGAGTTTAGGGCTTTA----------------------GGTAAGGTAAGA
ATATATTTCCTCGCTCAAATACTTGATGTGGATATGCAATGTGACTTACAATTCCTAGCTGTGCGTACTGTAGAGTGTAG
ACTGTAGTGTATGGTA----TCCTGGGGCGTCGTAATGTCTTACCAAGTAGCAACTTTATGAAGATACTCGACAACACAA
AAACTAGTACGCGTGACAGTTCAACCAGATTTTAATGGATGCATGAATTACAATCGGTACGATTTTCAACATCGCAAGCA
AATCATTCCTGACAAGTAACTAACCACTATCGTGTTAATGTTACAGGGATAATATGATTCCTCCACTAGCTTAGATGTTA
TATAAATTCTGATTAATATGGAACATCACGTCTTGTGTGCCTCTCTTTCATTAACATGGAAGATTCTACACCGACTT---
CTTTGAATTAGACAGGCAGATGATATTGCCTCCAAAAGG--AAAAAAAATAGAGGTTTGCTCTGTTTTTATGTTCAGTGC
TGTGCCAACATATTCAATTGTTTGCTGCCCCAGTTACCCCAAGCTATTTTCTTTTCTTTTTCATATATGTCAATACCTGA
ATACCAGATAGATAGAAGGTGGTATTAACTGCCCTTTGATCATGTTTTCATGTTTACACTTACC----------------
-----------------GGGTCAGAAGGCATACTCATGTTCCCAAACCATGTAGAAAC--------CTGCAACACACATA
GAACTTAACGTGTTCCCAAACCTTGTAGAAACCTACCACACACGTAGACACTTAACGTAGCTGAAATAGTAACCGATGTC
AGGATTATTTTCACCAGGTGAGGGATTCCTCACTTTAGCTGATCTATATGTTTCTCTTGCAGGTGTGCAAGTGGCCGACG
CTCCGATAAAACTCAGCGGAGTGAACAAGCGTGGTTGGAAGTACATAAAGGCATCGCAGAAGACGGTGCAGGATACCCCC
GCAGCAGAGACGCCAGCCGCTGCCA------CTGCCACCGCCACTGCTTAATTCGTTACAAGCTAGAACATTTAGAAGGC
GGCAAAACGTGTTCCTGTAGAAGCGTAGCGTCGAACTGTTCAGACGGTCGGTTGATCTGCCGTCTTCCACTCTTTCATAG
TTTC-CATGCTTTCCAGGGTTTTAGGCATAGTTGAAAGGG-----------CCCCGAATTGCCATGTCCGCCACGCTGTC
TT------GCTAAAGATGATGTCGCCGTCGAAAACATTTGTTTTGTA----TTTTCTACATTTTTGCAATGCCGCGTTTC
CATGAGAAGGAACAAGTGCGTCGCCTCGGCATTAGTTTGGTTGGGGTGGGTCTCATGTAATAAAAGTTCATCCTTGCTCT
GGTTCTTTTTTTTTTTTTGAACAAGGATTCTTGCTCTGTTAAGACTCTGGAACAGGGTAGCAATTAACATATACCGCATC
TGTTTCTTCATGCACTTTAGAGTGACGATTACCAGAAGTGATCCAC----------------------------------
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>chr6B_1
GACATTTGTTGCAAAAATCTTTGCAACAAGAGCTTTGTTGCAAAAAATA-----CAACATAATCATTGTTTCAAATGTTT
TTGCAACGAGACTTGTGCTGCAAAAGGATTCTCCCAACACGACTTTTCTGTTGCAAAAGTGACGACGATGCTTGACCCGG
AAATTGCGTTAGATCAGACGGCTCTTAGACCGGTGGATCTTTTATGATCCGCCTTAAAAAGATCCGTAGGCCGATGTGTA
GCCTGGCCCTTAGTTTATTGATTACTTTTCCTGATGGTATTTTGTGCAGTCGACTG-----TTTTTTATCTCAG--TGTA
TTTGTGTCATTGCGAAAAAAA--TAATTAGGAAAACTCAAATGACTGTTACTTCTAAAATTTACTCCCTCCATAAAGTAA
TATAAGACGTATTAAAATAAATTCAAATTGTATTTGAACTCGAATGACTAATACTCTTAAATAATCTCAAAATGAATTTG
AACTCAATCGTATTGGTGTCATTCC-GGG---AAACAATGTTCATTAGAAAAACTCAAATGGCTGTTGCTCTTAAAATTT
ACTCCCTCTGCAAAGTAACATAAGACGTATTAAAATAAATTCAAATTGTATCTGAACTCAAATGAATATATTACTCC-AA
ATAAACTCAAATTGAATTTGAACTCAAAGGTTT-ATGCAAAATGTTAATAAACTCAAACGATTTAGAATAAAATCAAGGT
TGAACTAAAACCACGACACTTGTTTTGGATCGGAA-GGGGTATTAATTATGCAAGGATTTAGTAAAATTTGTTCAAAGTC
AAAGTTGTTTCAAACTTGGGACTGTTCT------------TTTTTTTGAGCTGCACTAGCATTCTTTGCAAACCAGATTG
TAGCAAGCGGCCCAGATCAACCGA--------AGCCCACTCGGCGGCATTCTC--CTCCGGCAAGCTCCGCGTGAAACCC
TAGCCAG-CCCCGCCGG---CCGCCGCC---GCCGCTCCCCTCCCGTCCACGCCCCACCCGCG-----------------
---------ACCTCTCGAGGCCACTCCGGACACCGACGATAATGGCACAGAGGGCGGCGGGCGCGCTTCTCCGGCGGTCC
CTCGGGCTCGGGCTCGCGCCGCCGACGGCCCCGAGGGCCCTGAGCACCAGCGTCGCGGCGCCGGCCGCGGCGCCGGCGGC
GGAGGGGGAGGCGGCCGCGGCCAAGGTGAAGAGGAGCAAGAAGAAGAACCCGTTCGACGTGGTGCAGTTCCTGCCGGACT
GGGGGGTCGGCTACAAG---------------------------------------------------------------
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>chr7A_890
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---------------------------------------------------------CCGGCAAGCTCCACGGGAAACCC
TAGCTACTCCCGGCCGG---CCGCCGCC---GCCGCG--TCTGCCGTCCACGCTCCACCCGCGGGAGCTCGCCTCCTCCT
CCACCCGCTACCCCTCGAGGCCACTCCGGACG------GCCATGGCGCAGAGGGCCGCGGGCGGCCTTCTCCGACGGTCC
ATCGGG------CTCGCGCCGCCGACAACCGCGAGGGCCCTGAGCACCAGCGCCACCACGCCGGCCGCGGCG------GC
AGAGGGAGAGGC---GGCGGCCAAGGCGAGGAGGAACAAGAAGAAGAACCTGTTCGACGTGGCGCAGTTCCTGCCGGACT
GGGGCGTCGGCTACAGGGTTGCCAAGACCACCTGGCGCGACGTCTCCTACCAGATCACCAAGATCAACCTCTACAAGGTC
ACCATCGCCGCCATCTATAACAATCTCTGCGGAGGAGAAAATTGATCTC--------TTGTTTTCATCTCCGCGCCTTCA
CTGTGGTTTCGTGATCTCTGTATGTGCTGATGCAGGATGGCCGCCACGGGAAGGCGTGGGGGATTCGGCACAAGGCCGGT
GAGTCCTCGCACCC--CCCTGCTTACTGT---------------------------------------------------
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>chr7D_890
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---------------------------------------------------------CCGGCAAGCTCCACGGGAAACCC
TAGCTACTCCCCGCCGG---CCGCCGCC---GCCGCG--TCTCCCGTCCACGCTCCACCCGCGGGAGCTCGCCTCCTCCT
CCACCCTCTACCTCTCGAGGCCACTCCGGACG------GCCATGGCGCAGAGGACCGCGGGCGGCCTTCTCCGACGGTCC
CTCGGG------CTCGCGCCGCCGACAACCCCGAGGGCCCTGAGCACCAGCGCCACCACGCCGGC---------------
GGAGGGAGAGGC---GGCGACCAAGGCGAGGAGGAACAAGAAGAAGAACCTGTTCGACGTGGCGCAGTTCCTGCCGGACT
GGGGCGTCGGCTACAGGGTCGCCAAGACCACCTGGCGCGACGTCTCCTACCAGATCACCAAGATCAACCTCTACAAGGTC
ACCATCGGCCCCATCCATAACAATCTCTGCGGAGGAGGAAATTGATCTC--------TTGTGTTCATTTACGTGACTTCA
CTGTGGTTTCGTGATCTCTGTATGTGCTGATGCAGGATGGCCGCCACGGGAAGGCGTGGGGGATTCGGCACAAGGCCGGT
GAGTCCTCACTCCC--CCCTGCTTACTGT---------------------------------------------------
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>chr7B_890
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---------------------------------------------------------CCGGCAAGCTCCACGGGAAACCC
TAGCTACTCCCGGCTGG---CCGCCGCC---GCCGCG--CCTGCCGTCCACGCTCCACCCGCGGGAGCTCGCCTCCTCCT
CCACCCTCTACCTCTCGAGGCCACTCCGGACG------GCCATGGCGCAGAGGGCCGCGGGCGGCCTTCTCCGGCGGTCC
ATCGGG------CTCGCGCCGCCGTCAACCCCGAGGGCCCTGAGCACCAGCGCCACCACGCCGGCCGCGGCG------GC
GGAGGGAGAGGC---GGCGGCCAAGGCGAGGAGAAACAAGAAGAAGAACCTATTCGACGTGGCGCAGTTCCGGCCGGACT
GGGGCGTCGGCTACAGGGTCGCCAAGACCACCTGGCGCGACGTCTCCTACCAGATCACCAAGATCAATCTCTACAAGGTC
ACCATCGCCACCATCCATAACAATCTCTGCGGAGGAGAAAATTGATCTC--------TTGTGTTCATTTCCGTGACTTCA
CTGTGGTTTCGTGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGCAAGAGAACTGATAGAGT-------------------------GTGTCGAACAGTAGAA
CATGAATGCCC----------------------------------------------------CCCTTGGATGGAGGACT
ACCTCTGCTGGACATCAGTCTATGCAGTTGTGTGCACTAGGC-----------TCTGTTTTGGTTTTGGTTGCAAG----
-CTCTCAGATTAATTTGGTTGTGCCAGAATCTGTCTGATTTCGATAGCATTGTCAGAATGGTTTATAGT---GTCCTGGC
TAATTCAAGTTTGATAT-TTTTCATGGTGGAAAGCCTTT----------------------------AGGTAAGGCATCA
ATATGTTTCATCGGTCAAATACTTCATGTGGATATGCAGTGTAACTAAAATTTCCTAGCAATTCAT--------------
ACTGTGGCGTATGGTACATTTTCTAGGACATTCGATGTCTTTATCCCAGAAAGAAAAGATAAAAGAAACACAGCACACGT
AACAGTTA------------TTTACCAGGTTTTAAAGGATGTATCCGTTGCATCACTAGGCCACGCCAAATC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ATTCAGTTGTTTGCTGCCCCAGTTACCCCAAGTTATTCTTCG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCTTTTTTTATGTCTGGACCAAGATAGAT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>SNPs
------------------------------------SS---------S---S----------------------------
---------------------------------------S---------S--------------------------S---
--------------------------------------------------------------------------------
--------S------------------------------S------S----------------------------S----
--------------S------SS----------S----------------------------------------------
---------------------S-----------S----------------------------------------------
--------------S--------S-S---SS----S-----------------SSS-------S----------------
----S--S---------------S-S-------------------------------S-----------------S----
------------------S--------S---------------S---S--S--------------------------SS-
------------------------------------------S--------S-----------S--------------S-
---------------------------SS----------------------S----------------------------
-----S--------------------------------------------------------------------S-----
---------------------------------------------------S----------S----------------S
--S-S--S------------------------------------------------------------------------
------------------------S-------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S---------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
----------------------------------------------S-------S-----S-SS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-----------------------S-------------S---------------S---
-------------S------------------------------------------------------------------
----------------------------------S------------------S---------------SSS--------
-----------------S---------S----------------------------------------------------
-----------S--------------------------------------------------------------------
------------------------------------------------------S-S----------------S------
--S----S-S-SS--S--------S-----S---------S-----S---------SS----------------------
-------------S----------S----S--------------------S-------------------S---------
--------------------------------------------------------------------------------
-------------------S------S-------------------S---------------S-----------------
S-------------------------------------------------------------------------------
---S-------------------------------------------S--------------------------------
--SSSSS--SSSS-SSS----------------S------------------------S-----SS----S-------S-
------------------------------------------------------S-S---S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-------------------SSSSSS-------S----------------------------S------------
----------------------------------------S-----S---------------------------------
S---S----------------------------------------S------------------S---S----S-----S
-S--S------------------------S---------------S-------------S-------------S------
--------------------------------------------------------------------S--S--------
-SS-------------S---------------------------------S-----------S--------SS-------
---------------------------------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_886
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TGCAAACCAGAGTG
TAGCGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2804
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GCGTTAGGCTTACTGGGTCA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_2641
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TCCGTCTCATGTTCAGTGC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_3659
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GTAGCCCAAGCGAATGCAAC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
