>input_sequence_44523
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------------CAACCTCCATTGCCGCTCCCTCCTTGT------TCCAACCAAGCACCTCCTCCTTCTTCCTCCTCTTC
---------GAGGTGGCGTGCTAGATGGTCGCTGAGGCGGTGGGCTTCATGATGTCCCGCGCGGCGGACGGCGGGACCAT
CGCGCCGGAGCTCGTCACCCGGGACTTCCTCGGCGGCTGCCAGGCGCCCGCCCCCGCC---GCCGACGGCCCCAGGCACG
ACGCCGCCGCCCTGCA------------GGTACGCACCGCTCCACGGCCCATGCTCTGTTTCCTCTCCCTT----CGCGT
CTTCACTTTC--GCTTCGTTTTCTTCTTCTTCTTCCGTGCTCAATTGCGATTGGACGGTACGTGCTCCAGTGCTTAATTA
AGTAAGACTT-------------------------TTC-AATTTGTTCAGTCAATGGGCCGATTACTCTCCTT-----GT
AATATCCATGCGCGCCGAAAAT----TAGTTTGGTCGGCAAATTTGACCGCGGAATAGTTA-------GTTGCCATTTGT
GGGCTTGGTCATACAAGAGGGTGGGGTGAACTTTGAGCCTGAGGCTATGCAATTCCCATGTCACAGTGCAGGAGCCTTTC
CCAGC--CT-AGTCTTTCTTTTCTGTGAGATCAAAAAGTAGATTATTA-----------------TACTGCAT-------
----CAATTTTATATCTC----GAGTATCTGTCGTACAGCG------------------------------AGT------
---AGCAATTGT--TCTCTAGGTGTA---------------GTAGTTAATTCATCTTCATCTGTCTGCCATGTTCCACCG
GCAAGTTTAATTATTCTC----ATCTTGCCCAATAATGTAGCAGCCTCACTTAAGGC----TTCACGATATGGCCATTGA
AATCTC------------------------------TGCAATAACAGCTGGGTAGTGGTACAAGTAT---TAGTAGTAAC
AATCTTTTACTTACTGCGGTGATTTTTATTTTGTGCGTGCAGCC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGGCAAG
CCGCCGCTGCAGAAGCACCGGAGCCCGCCGCCGTCGGCGA-GGGGGGACCTCAACCTCTTCCCCGCCTCCGGCGCCGCCA
TGGCGCCGTTGCCGACGATGGCGCCGGCTGCGGACTGCGCCGCCACCACCACGTACCACAGCGTGTGCACCATCGAGAAG
GTCAAGACGGCGCTGGAGCGGTTCGAGCGCGGGAAGCAGGGGCAGGGGC---ACCACCAC------------------CA
GCAGCAGCAGAGCGGCGCGGGCGCGGGCGCGGGCGCCTCCCCGTCGTCGTCCTCGGTCACCACCTCC---GTCAAGCGCC
GCGGCGACGTT---GCCGTGGAGCAGGGCGACGGCTGCGACTCTCCGTCTGCCAGC---------GGGGGCATGGTGGCC
GCCGCCTGCCCGCGCTGCTTCCTCTACGTGCTCATCGCCCGGAGCGACCCGCGCTGCCCGCGCTGCGAGTCGCACGTGCC
GCCGCCCCCGGCCCCGGCGCCCAAGAAGAAGCCGAGGATCGACCTCAACGTCGGCTTCCTCGGCACCTAGCCGGGCCACC
AGCTACTCCAACCACGTAGCCAAGCCAAGCCAAGCCAAGCCAAGAAGAAGTAGGTCCTCCGTCAAGATGGCTGTCGTC--
----------CGTCCTCGTCCTCGGCGCGGTAGGTAGGCACTAGGCAGGC----CTCCGGTGCCCGGATTGGCCACGGCG
GCGCCATTGCTTTTCTGATGCCACCGACGGACTCCGGTACATAGGGGACGTGGAGGTGCTCCGATCAAGATTTTTTGCTT
GTCCATTTCCGAGTATGGCCGGCCGGCCGTCCGTCCGTCCGTCCCCGATTCTGTCATGTCATGTCAGATCAATCAAACAC
TCGATAGAACATGAATGAATGAAACTACTATTC-----------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr4B_1_TraesCS4B01G017000
CAGAGCAGGATACACGCCCTACTAAAACTAAAATATAAACACCTAAAATATAATCAAGGAAGATGGTACCACTAAAATCT
CAGTTCGCTGGCAAATGAGGTCTAAGATCTTCAACGT--GATAAAAAGCAACAAGAGAAAACAGTCAATTTTGAACGTAA
ACCAT-AAAAAACCATTCGTCACTGAATTTCAGAAAATTCTTGGTCAATCTAGCATTAGCTCGTGTTTGGACATCAGTAT
TTTATAGTCGTCGCTTTCACAGGAAGAGA---------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AAAA
AAAAAGGGTATGCTACGCCT-GGAGACCACTCTGATATTGTCCGCATCTTATAGCATCACATCCAATGGCTATAAAATGT
GAATGAGACCAAATTATATCTCATCTAGATGAGTTTTAGCAAAACTGCCCTTTCCTCTC---------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAAAAAA
TAGGACAAACAAACAATGGATCCTCCTTAAAGAAAGCAATGGATCCATAGACGAGTACGGTTACCTTTGTGCCACTAGTA
GTTTAATGGGCGGACGAATTTTGAGTGTTCG---------------TTGTTAAGCAATCCCGAGGTGGATACCTTGGGGC
GCGGGCCCACCGAATCCCCACGCGAGCCCGTGCTTCTACTCCTCCACTTCCACTTGCACCCGCCTC--------------
----------------------------------ATCTTCACACGCACTCTTTAAGAGAGAGATGAGTGAAATAATTAGA
GAGGCAATCCTTGATCTTGATGAGAGAGCGAGGCCATGAATGAATGGCGAGCAGTGTGGCGTAGGCTGGGCCATCCCCAT
CGGCCCCGTCCGTCCCTCTCACCCAGACGCAGACGCAGACGCAGACGCAGACGCACTCATCACACACGCACCGGGAGCGG
GAGGGAGGCCATCAATGCGCGCATTGAATGCACATCTTGTCCTCATGCCCTCCCTTTCCAACACCCCAATTAATGGCGCC
CATACGTGCCTCCAAAACTCCCCCTGTTTCCCCTCCCCTTCCCCCTCCATTTATCTACCTCCTCCTCCCCCCGCGT----
CTCCCTCCCTCACAACCTCCATTGCCGCTCCCTCCTTGT------TCCAACCAAGCACCTCCTCCTTCTTCCTCCTCTTC
---------GAGGTGGCGTGCTAGATGGTCGCTGAGGCGGTGGGCTTCATGATGTCCCGCGCGGCGGACGGCGGGACCAT
CGCGCCGGAGCTCGTCACCCGGGACTTCCTCGGCGGCTGCCAGGCGCCCGCCCCCGCC---GCCGACGGCCCCAGGCACG
ACGCCGCCGCCCTGCA------------GGTACGCACCGCTCCACGGCCCATGCTCTGTTTCCTCTCCCTT----CGCGT
CTTCACTTTC--GCTTCGTTTTCTTCTTCTTCTTCCGTGCTCAATTGCGATTGGACGGTACGTGCTCCAGTGCTTAATTA
AGTAAGACTT-------------------------TTC-AATTTGTTCAGTCAATGGGCCGATTACTCTCCTT-----GT
AATATCCATGCGCGCCGAAAAT----TAGTTTGGTCGGCAAATTTGACCGCGGAATAGTTA-------GTTGCCATTTGT
GGGCTTGGTCATACAAGAGGGTGGGGTGAACTTTGAGCCTGAGGCTATGCAATTCCCATGTCACAGTGCAGGAGCCTTTC
CCAGC--CT-AGTCTTTCTTTTCTGTGAGATCAAAAAGTAGATTATTA-----------------TACTGCAT-------
----CAATTTTATATCTC----GAGTATCTGTCGTACAGCG------------------------------AGT------
---AGCAATTGT--TCTCTAGGTGTA---------------GTAGTTAATTCATCTTCATCTGTCTGCCATGTTCCACCG
GCAAGTTTAATTATTCTC----ATCTTGCCCAATAATGTAGCAGCCTCACTTAAGGC----TTCACGATATGGCCATTGA
AATCTC------------------------------TGCAATAACAGCTGGGTAGTGGTACAAGTAT---TAGTAGTAAC
AATCTTTTACTTACTGCGGTGATTTTTATTTTGTGCGTGCAGCC------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------CGGCAAG
CCGCCGCTGCAGAAGCACCGGAGCCCGCCGCCGTCGGCGA-GGGGGGACCTCAACCTCTTCCCCGCCTCCGGCGCCGCCA
TGGCGCCGTTGCCGACGATGGCGCCGGCTGCGGACTGCGCCGCCACCACCACGTACCACAGCGTGTGCACCATCGAGAAG
GTCAAGACGGCGCTGGAGCGGTTCGAGCGCGGGAAGCAGGGGCAGGGGC---ACCACCAC------------------CA
GCAGCAGCAGAGCGGCGCGGGCGCGGGCGCGGGCGCCTCCCCGTCGTCGTCCTCGGTCACCACCTCC---GTCAAGCGCC
GCGGCGACGTT---GCCGTGGAGCAGGGCGACGGCTGCGACTCTCCGTCTGCCAGC---------GGGGGCATGGTGGCC
GCCGCCTGCCCGCGCTGCTTCCTCTACGTGCTCATCGCCCGGAGCGACCCGCGCTGCCCGCGCTGCGAGTCGCACGTGCC
GCCGCCCCCGGCCCCGGCGCCCAAGAAGAAGCCGAGGATCGACCTCAACGTCGGCTTCCTCGGCACCTAGCCGGGCCACC
AGCTACTCCAACCACGTAGCCAAGCCAAGCCAAGCCAAGCCAAGAAGAAGTAGGTCCTCCGTCAAGATGGCTGTCGTC--
----------CGTCCTCGTCCTCGGCGCGGTAGGTAGGCACTAGGCAGGC----CTCCGGTGCCCGGATTGGCCACGGCG
GCGCCATTGCTTTTCTGATGCCACCGACGGACTCCGGTACATAGGGGACGTGGAGGTGCTCCGATCAAGATTTTTTGCTT
GTCCATTTCCGAGTATGGCCGGCCGGCCGTCCGTCCGTCCGTCCCCGATTCTGTCATGTCATGTCAGATCAATCAAACAC
TCGATAGAACATGAATGAATGAAACTACTATTCCTACTGGTAGAACCGAACTCCATCCATAATTGCTCAAAGCGTCTGCC
TGCGTGCCAATTGTTCGTT----------------------------GCTTCAGTTATTGCCACCAGCGGTGCCGCGCAT
GGCACAT-----CGGCATCCCATTCAT----GGCGGACGACGCGACCAGTTCGCTCTTAATTAGGGCAGGGGCGTGTCAC
GGGCTTCCTCGCCTCCATTTTAATGCCGGAGACGACGGCGACGACGATGATGAT------GGGGGTTTGACGTCGCAGCT
GCTGTAGCCG---TGATGAATAAGCTGCAGTGGCAGTGCAGTTTGTGATCTAGTGGTACTAGCCCGGCATGAATGAATGC
CGGTTAATGGGCGATGTGATGGTTGTCCGTGCCCGGTTGTCTTCTGGTAGGGGATGACAGGGAAAGCCAAGCTGCTGAGC
CTGCGTGAGGTATCTCAATATACGTAGGTTAATTATGGAGTCTGTCGATTTAGAGATGATGTTTGGGCCATTCAGGGTTT
CGTCTGGTTTATTTAGGGGAAAGCCAACTCTTTATTCAAATTCCACAGAAAGTGGGATATGAGTTTGATCATGGGGTTGG
CCAAACCACACGTGACACCCTGAACCTCCCGTAAGAGAAAACCTGGCTAGACTATATGCTTCATAATTCACAGCACGACA
TTCAAAAGAATGATGGCGCCATATTGACCACAGTTTCCCTTGGTGATATCTAAGACTACTTGCTTGCAATCTGAGGCAAG
TACAAAATTATTCAGAAGTAGATCTTCGCCTAGGGCAATGGCCTCCCTGCACGCTAGAGCTTCCAAGGAAGCAGGGTCCT
CGACACCATGAATCACTAGGGCAGAGCTACCCAGGTAATCGCTGTTGCTATCTCGGCACACCGCAGTGGCAGCTCCTCCT
CTTCCTAACAACACCGTAGCGTCAACATGAATCTTGGCATATCCCAGAGGGGGAGTCTTCGGGAGTCACAGTGCCACATG
CAGTACTGAAGTAGTCGCTGTCTTACTACGCTGGTTTCC
>chr4D_49
TATAGTCAGT-----------------------------------------------GGGAGATGGTACCATTAAAATCT
TTGTTCACTAGCAAATGAGGTCTAGGATCTTCAACAAGCGATAAAAAGCAACAAGAAAAAGCAATCGATTTTAAACTTAA
ACCTTAAAAAAGCCATTCGTCCTTCAATTTTAGAAAATTCTTGGTCAATCTAGCATTANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCACAAGAAAA
AAAAAGGTTGTGCTACGCGCGGGAGACCAATCTGATGCTGTAGATAAAATGGAAAACCCTGACCATATCAAATACCACAA
GTCTTTATCTTGAGCGGGCACAAGGATTGACACCAGACGGCAGTGGTCCGCGATTGTTGCCTTTCATCACAAACAAAAGA
AGTCTAAATTAGTCTAGACATCATCATAATCCTAATAAATGGTACCATTAAGCTACCAGGCAACTAGTGTTAAATAGTAG
GGGTACTATGTAGCACTGTAGTGGTATAAATAGTAGGAGTAGGAGTATTTTCTTTGGACTGTTGTAGCTGAGCAAATTTC
GCAAACCCTGTTTTTTTTTAGCGGCTTATAGTCGTAGGGATTGTGTCACGGCCGTGTGGCTCGATCAAAGACCCTCATGT
ATCAAATCTCTTTCGCTTCTTGCTTCTTGATCGTAACACTGTAATTTTAAAATACAACCCGCTTCTCTCTGAAAAAGAAA
GATGGCAAACAAACAATGGATCCTCCTTAAA-AAAACAATGGATCCATCGATGAGTA--------------------GTA
GTTTAATGGAG----GATTTTTGAGGGTTCATCACGGGGTCTCCACTTGTTAAGCAATCCCGAGGTTGATACCTTGGAGC
ACGGGCCCACCGAATCCCCACACGAGCCCGTGCTTCTACTC---CACCTCCACTTGATCTTCTATTTATGTTTACGCCAC
CACGCGGGGTACATAAATACATACTCTTAATATAATCCTCACACCCACTCTTGAAGG--GAGATGAGAGAAATAATTAGA
GAGAAGCTTGATGAG-----TGAGTTAGAGAGGCCATGAATCAATGGTGAGCAGTG--GCGTAGGCTGGTCCATCCCCAT
CGGCCCGGTCCGTCCCTCTC------------------ACTCAGACTCAGACTCGCTCATCACACACGCACCGGGAGGGA
GCGGGAGGCCATCAATGCACGCATTGAATGCACATCTTGTCCTCATGCCTTCCCTTTCCAACACCCCAATTAATGGTGCC
CATACGTGCCTCCAAAACTCCCCCTGTTTCCCTTCCCCTTCCCCCTCCATTTATCTACCTCCTCCCAACCCCGCGTCTCC
CTCCCTCCCTCACAACCTCCATTGCTGCGTGCTCCCTTCCTCCTCTCTAACCAAGCACCTCCTCTTGCGCTGCGGGTGCT
GGCTACCTAGAGGTGGCGTGCTGGATGGTCGCTGAGGCGGTCGGGTTCATGATGTCCCGCGCGGCGGACGGCGGCACCAT
GGCGCCGGAGCTCGTCACCCGGGACTTCCTCGGCGGCTGCCAGGCGCCCG---CCCCC---GGCGATGACCCCAGGCACG
ACGCGGCCGCCCGGCACGACTCCGTCATGGTACGCACCGCTCCCCCACCCACGCTCTGCTCTGCTTTCCGTCTAGCGCGT
GTTCGCTTTC--GCTTC---TTCTTCTTTCTCTCCCGTGCTCAATTGGGTT-----------------------------
---GGACCGTACGTGCTCTAGTGGTTAATTAAGACTTTTCAATTTGTCAGTCAATGGGTCGATTAGTGTCCTTCT----T
AATATCCATTCGCGCC----AT----TAGTTTGGTCAGCAAATTTGACCGCGGACTAGTTAGTGGTTCGTTGCCATTTGT
GGGCTTGGTCATACAAGACGGCGAGGTGAGCTTTGAGCTTGAGGCTACGCAATCCTCATGT------GGAGGAGCGTTTT
CCAAC--CTGGGTCTTTCTTTACCGGGGGAGGGCTTTGCATGAATTGTTGATCAAAATAGACTACTACAACAA-------
----CATTTTTATATCTAGGTGGAGTATCTGGAGTACAGTG------------------------------AGT------
---GGCAATTGT--TCTCTAGGTGGAGTAGATTATTCGCAGCTC----ATTTATCTTCATCTGTCTGCCATGTTCCACCG
GCAACTTTAATTATTCTGATGCGC---GCCCAATAATGCGT---CCTCAGTTAAGGC----TTCACCATATGGCCATTGA
AATCTCAGCCATGCAAATAGGAGTGGTAGTACTCTCCGCAATAACAGCTGAGTGGTCGTACTCCTACAAGTAGTATTAAC
AATCTCTTACTTACTGCGGTGATTTCTT-----TGCGTGCAGCC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGGCAAG
CCACCGCTGCAGAAGCACCGGAGCCCGCCGCCGTCGGCCA-GGGGGGACCTCAACCTCTTCCCCGCCTCCGGCGCCGCCA
TGGCGCCACTGCCGACGATGGCGCCGGCGGCGGACTGCGCCGCCACCACCACGTACCACAGCGTGTGCACGATCGAGAAG
GTCAAGACCGCGCTGGAGCGGTTCGAGCGCGGGAAGCAGGGGCAGGGGCAGCACCACCAC------------------CA
GCAGCAGCACAGCGGCGCGGGCGCGACCGCGGGCGCCTCCCCGTCCTCCTCCTCGGTCACCACGTCCTCCGTCAAGCGCC
GCGGGGACGCCGGCGCCGTGGAGCAGGGCGACGGCTGCGACTCCCCGTCCGCGGGC---------GGGGGCATGGTGGCC
GCCGCATGCCCGCGCTGCTTCCTCTACGTGCTCATCGCCCGGAGCGACCCCCGCTGCCCGCGCTGCGAGTCGCACGTGCC
GCCACCCCCGGCCCCGGCGCCCAAGAAGAAGCCGCGGATCGACCTCAACGTCGGCTTCCTCGGAACCTAGCCAT------
---------------------------------GCCAAGCCAAGAAGAAGTAGGTC-------AAGATGGTTGTCGTCCG
TCCTCGTCCTCGTCCTCGTCCTCGGCGCGTTAGGTAGGCA----GCAGGC----CTCCGGTGCTCGGATTGGCCACGACG
ACGCCATTGTTTTTCTGATGCCACCGACGGATTCCGGTACATAGGGGAGGCGCTCCAGA------------TTTTTGCTT
GTCCATTTCCAAGTAT----GGCCGGCCGTCCGTCCGTCCGTCCCCGATTCTGTCATGTC-----AGATCAATCAAACAC
TCGACAGAACATGAATGAATGAAACTACTATTCCTACTGGTAGAACCGAACTCCATCCATAATTGCTCAAAGCGTCCGCC
TGCGTGCCAATTGTTCGTCCGTTG-------CTTCCATGTGCGTGCAGCTTCAGTTATTGCCACCAGCGGTGCCGCGCAT
GGCACATCATCTCGGCATCCCATTCATTCATGGCGGACGACGCGACCAGTTCGCTCTTAATTAGGGCAGGGGGGTGTCAC
GGGCTTCTTCGCCTCCCTTTTAATGCCGGA---------GACGACGATGATGAT------GA--GTTTGACGTCGCAGCT
GCTGTAGCCG---TGATGAATGAGCAGCAGT-GCAGTGCAGTTTGTGATCTAGTG---CTAGCCCGGCATGAATGAATGC
CGGTTAATGGCCGATGTGATGGTTGTCCGTGCCCGGTTGTCTTTTGGTAGGGGATGACAGGGAAAGCCAAGCTGCTGGCC
--------------------------------------------------------------------------------
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>chr4B_1063
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---------GAGGTGGCGTGCTAGATGGTCGCCGAGGCGGTCGGGTTCATGATGTCCCGCGCGGCGGACGGCGGGGCCAT
GGCGCCGGAGCTCGTCACCCGGGGCTTCCTCGGCGGCTGCCAGGCGCCCG---CCGCCGACGACGAC-------------
------------------------------------------------CCACGCTCTGTTTTCTCTC-------------
-TTCGCGTGTTGGCTTT---CGCTTCTTCCTCTTCCCTGCTCAATTGGGATTGG--------------------------
ACCGGACCGTACGCACTCTAGTGGTTAATTAAGACTTC-CAATTTGTCAGTCAATGGCTCGATTAGTCTCCTAGTGGAGT
AATATCCATCCGCGCCGAAC------TAGTTTGGTCAGCAAATTTGACAGCGGAGCAGTAGTAAGTG-GTTACCATTTGT
GGGCTTTGTCATACAAGAGTGTGAGGTGAACTTTGAGCTTGAGGCTACGCGATTCCCATGT------GCAGGAGCCTTTT
CCGAC--TT-GGTCTTTCTTTACCGTGGGAGGGATATGCATGAATTGTTGACCAAAATAGACTACTCCTACTACGTATTG
TAAGCATTTTTATATCTC----GAGTATCTGTCGTACAGTG------------------------------AGTACTAGT
AGTAGCAATTGTTCTCTATAGGTGGAGTAGATTGTTCGTACGTAGTTAATTCATCTTCGTCTGTCTGCCATGTTCCACCG
GCAAGTTCA------------GATCTTGCCCAATAATGTAGCCTCACTTA--AAGTC----TTCACGACATGGCCATTAA
AATCTCAACCATGCAAGCATT-----------------------------------------------------------
AATCTTTTACTGACTGCGGTGATTTCTT-----TGCGTGCCTGCCAAGGTTTCTAATTTCGAAAACAAAATAATTTTGGA
GCCTATCGAAATATGCGAAATTTCGGAAATTTCGCTATTTCGAATTTTTCCTATTTCAAATTTAGCTTAATTTTATTAAA
TTCTAAAAAACTTAAATTCATTTGAAAAACTGTTTGAATCTGCATCGAAATTTTGGTGTTGATAATATTTCAGCCCCCCA
CTAAAATATGCTAAATTTCGGAAATTTCACCGAAATTTCGTTGAAATTTTTAACCCTGCGTGCAGCCCGGCAACGGCAAG
CCGCCCGTGCAGAATCACCTGAGCCCACACCCGTTGGCCGGGGGGGGACCTCAATCTCTTCCCCTCCTCCGACACCGCCT
TGGCACCGTTGCCGACGATGGCGCCGGCTGCGGACTGCGCCACCACGACCACGTACCACAGCGTGTGCACGATCGAGAAG
GTCAGGATCGCGCTGGAACAGTTCGAGCGCGGCAAGCTGGGGCA------------CCAC------------------CA
GCAGCAACACGGCGGTGCAGGCG------CGGGCGCCTCCCCGTC------------------GTCATCCGTCAAGCGCT
GCAGCGATGCCAGCGTCGTGGAGCAGGGCGACGGTTGCGACTCCCTGTCCGCCAGCG-----------------------
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>chr4A_1063
--------------------------------------------------------------------------------
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---------GAGGTGGCGCGCTGGATGGTCGCTGAGGCGGTGGGCTTCATGATGCCCCGCGCGGCGGACGGCGGCACCAT
GGCGCCGGAGCTCGTCACCCGGGACTTCCTCGGCGGCTGCCAGGCGCCCG---CCCCCGCCGCCGACGACCCCAGGCACG
ACGCCGCCGCCCTGCA------------GGTACGCGCCGCTCCACGGTCCATGCTCTGTTTCCTCTCACTCTC------T
GTTCGCGTGT--GCTTC---GTCTTCTTCTTCTTCCGTGCTCAATTGCGATTAG--------------------------
AGTAAGACTT-------------------------TTC-AATTTGTTCGGTCAATGGGCCGATTAGTCTCCTT-----TT
AATCG---TGCGCGCCGAATTACTAGTTGTTTTGTCGGCAAATTTGACCGCCGACTAGTTATTAGTT-----CCATTTGT
GGGC-TTGTCATACAAGACGGTGAGGTAAACTTTGGGCCTGAGGCTATGCAATTCCCATGT------GCAGGAGCCTTCT
CCAACTTTT-GGTCTTTCTTTTGTGTGGGAGGGCTATGGATGAATAGATC----AAATAGACTTGCATTAGTTTTGTACT
GGTAGTAGTA-ATATCTT----GAGTATTTATTATTGTACCAGTACTGTACTGTATTTACAGGAGAGTACTAGT------
---AGCAATTGT--TCCCTGGGTGGAGTAGATTATTCGCAGTTAATT--------------TGTCTGCCATGTTCCACCG
GCAAGTTTAATTATTCTGAGTGATCTTGCCCAATAATGCAGTAGCCTCACTTAAGACTTCATTCACGACATGGCCATTGA
AATCTCAACCATGCAAATAGGAGTGGTA---CCCTCTGCAATAACAGCTACTCCGGTGTACTGGTAT---TGATCTTCGA
A------TACTTACTGCGGTGATTTCTTTGC-GTGCGTGCAGCC------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------CGGCAAG
CCACCGCTGCAGAAGCACCTCAGCCCGCCGCCGTCGGCCA-GGGGGGACCTCAACCTCTTCCCCGCCGCCGGCGCCGCCA
TGGCGCCGTTGCCGACGATGGCGCCGGCGGCGGACTGCGCCGCCACCACCACGTACCACAGCGTTTGCACGATCGAGAAG
GTCAAGACCGCGCTGGAGCGGTTCGAGCGCGGCAAGCAGGGGCA------------CCACCACCAGCAGCAGCAGCAGCA
GCAGCAGCACAGCGGCGCGGGCGCGACCGCGGGCGCCTCCCCGTCCTCCTCCTCGGTCACCACCTCCTCCGTCAAGCGCC
GCGGCGACGTT---GCCGTGGAGCAGGGCGACGGCTGCGACTCCCCGTCCGCCAGCGCCGGCGGCGGGGGCATGGTGGCC
GCCGCCTGCCCGCGCTGCTTCCTCTACGTGCTCATCGCCCGGAGCGACCCCCGCTGCCCGCGCTGCGAGTCGCACGTGCC
GCCGCCCCCGGCACCGGCCCCCAAGAAGAAGCCAAGGATCGACCTCAACGTCGGCTTCCTCGGCACCTAGCCCGGCTAGC
AGCTACTCCAACCACGTAG----------CCAAGCCAAGCCAAGAAGAAGTAGGTCCTCCGTCAAGATGGTTGTCGTC--
----------CGTCCTCGTCCTCGGCGCGTTAGGTAGGCA----GCAGGCAGGCCTCCGGCGCCCGGATTGGCCACGACG
ACGCCATTGTTTTTCTGATGCCACCGACGGATTCCGGTA-----GGGAGGTGGAGGTGCTCCGATCAAGATTTTTTGCTT
GTCCATTTCCGAGTATGGCCGGCCGTCCCCGATGATTC------------------TGTCATGTCAGATCAATCAAACAC
TCGATAGAACATGAATGAATGAAACTACTATTCCTGCTGGTAGAACCGAACTCCATCCATAATTGCTCAAAGCGTCTGCC
TGCGTGCCAATTGTTCGATCGTCCGTTGCTTCTTCCATGTGCGTGCAGCTTCAGTTATTGCCGCCAGCGGTGC-------
------TCATCTCGGCATCCCATTCATTCATGGCGGACGACGCGACCAGTTCGCTCTTAGTTA------GGGGGTGTCAC
GGGCTTCCTCGCCTCCTTTTTAATGCCGGG---GACGACGACGACGATGATGATGACGGGGA--GTTTGACGTCGCAGCT
GCTGTAGCAGCCTTGATGAATGAGCAGCAGT-GCAGTGCGGTTTGTGATCTAGTG---CTAGCCCGGCATGAATGAATGC
CGGTTAATGGCCGATGTGATGGTTGTCCGTGCCCGGTTGTCTTCTGGTAGGGGATGACAGGGAAAGCCAAGCTGCTGAGC
CTGTGTGAGGT---------------------------------------------------------------------
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---------------------------------------
>SNPs
S-S--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----------S--------
SS----S--S--------------S----------SS-------------------S---S--S--S-----S---S---
---S-------S---------SS-S-----S---------------------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------
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-------S-S--------SS---------S------SS---SSSS-SSS-SS-SS-S-SSSS---SSSSSS---SS-SSS
-SS-SSSS-SSS-SSSSSSSSS-SSSSSSSS-SSSSSS-SS-SSSSS--SSSSSSSS-S---------------------
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----------------------------------------------------------------------------S---
S-S-S--------------------------S---S------------S--S-----SSSSSSSSSSSSSSSSSSSS---
---------SSSSSS--S-------S----S-----------------------------------S----------S--
S--------------------S-------------------SSS---S--------SS-SSSSS-S--------------
-------------------------------------S------S-------S---SSS--------S------------
---SSSS-SSS---SSSSSS----SS--S------------S-----S--------SS-----------S----------
------S-------------SSSSSSSSSSSSSSSSSS--S-----S-----S-S----------------------S-S
-S----------------S------------------------------S--------------------------S---
--------------------------------S--------------------------------SSS------------
-------------------------S--SSS----S-SS--------S----------------S-S-SSSSSSSSSSSS
--------------------------------------------------------------------------------
S-------------------------------------------------SSS---------------S-----------
--------------------------------------------------------------------------------
S---S------------SSS----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS
-----------------------------------------------------------------S--------------
-------------------S----------------------------------S-------------------------
-----------------------S-------------------------------------SSSSSS------------S
---S------S----------------S--SSS-S-S-S-SSSSS-S----------------------S----------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------S--S--S----SS------------S----
-------------------------S-S-SSS------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
----------------------------------------------------------------------S---------
--------S-----------------------------------------------------------------------
---------S---------------SS------------------S--S-------------------------------
-------------------------------------------S-----S------------------------------
--------------------------------------------------S-----------------------------
------------------------------------------------------------------------S---S-S-
-------------------SSSSSSSSSS-----------------------------------------S---------
-----------------------------S----------SSSS---------------------------------S--
S--------S---------------------S----------------S-------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------S-------
----------------S-------------SSS----S-----------------------SSS----------------
---------------------S---S-----S-----------------------SSS----------------------
----------S---------------------------------------------------------------------
---S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_22
--GAGCAGGATACACGCCCTAC----------------------------------------------------------
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>reverse_2666
--------------------------------------------------------------------------------
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-------------------------TTATTTTGTGCGTGCAGCCC-----------------------------------
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>forward_1322
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------AGAGAGCGAGGCCATGAATG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>reverse_3690
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CTTTTCTGATGCCACCGACG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>forward_3544
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ACTCCAACCACGTAGCCAAG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>reverse_4573
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ATGGCGCCATATTGACCACA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
