>input_sequence_44521
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----ACCCCGCAAAAAAAAAAAAAAAACTTACTCTTCTGCTCTGTCTTGCGTGTTTTCCCCTCGCCCGGCGCTCTTGGCG
CAAACCCTTGGGAGGCAGAGTCCAGCCATGGCGTGCGCGCTGCTGCCTGCAGGTGTGGCCGCGGTCCTACCGTCTCCTCG
CCGGAGCGCCGCCGCCTCGAAGGTAATTCGTCAACCACACTTTCTTCTACCCCCGTTTCATGGAGCAGGCATTCAGTCGA
ACAAGTTGTGGGCTCCGCCCCTAGATGGTTGACATAAACTGATGTGATGCTTGCGAGACTGCAATAGAGTTGGGCAACAA
ATATAATCGCAATATTTCAGAGCCTGCTAGTCAAAATTTTGTTTATTGGCTTGTATACATGACTGCCCCAAG--------
-------------------------------------ATGTTCACCCCTTTCTGTTGTTCAAATCTGAAGGTTGTAATAA
TAGTCCTGCTGGAACTTGAGCCACTCAAATTTTATCTCAGGAACGCCGGAGTACCGCATTCCTCATTAGTTGC---TACA
TTCTACTCCCGGTTTTCCAAAATATTCTCCTTTTGCCAATTGCGGTGCCTACCTTAGAAACAAGAAGCTGAATGATACTC
CCTCTGTAGATCTGTGGAGTACTTGTGTTCAATTTTCATTACTCTGCATAAGAACATGGTAGATCCCA----GCACCTAG
TTCAACCAGGTGCTTAAATCATTCATACTATGTCTAACCAGTT-AAACTCAATGGGTTGTTGTTGCTGCTGCTGCTTTCT
CAACCACCTGAATCTGAAATTCTAATACATCTTTACTCACAGGGACAGCGGAGTCAAGTTGCGTGCACGAACCAGCTTCA
CTGGAAGCAGCCTTTAAG------------------TGGTGAGTGCTGCATCCATTACAACCTGAAAGAATTTGAATGGA
AAAAGAGAAGTTATAATTCAGCATCTGATTTCATTTGGCCTGAGATTTTTATACTACTGATG--------GCAACTGCAG
AGCTCCACAGACCCAGGAGCCTTGTTGGCTGCTGCACATGTTCAGGTTCGTCGACAGGAGCAGCTATGTCA---AGATCT
GTAGATGCTGTAAGTTTTCATGCCGATGTATCTCTGAGAGACCCTGTGGATGCAGTTCTAGGTGCGCAGATAGTTATCTC
TGGCTACTGGATTGGTCCCGAGGTGGAAGATGGTTGTGGTCACGTTCATGCCATTCTGCAAAGAATTGGCTGATGATGTG
TCATGGTTAACAAGGTGATTTCCCTAATATTCGAACATAATCTAGTCTCTACTCTCTACTACCCACAGA-ATCCATATTG
TAATGTTTCTTTTGGGATGGATTAGTATGCGATCTCCTGCGGTCAAATCTGACATTGTGTTTGTTCTCGATGCCCCTGAA
GCAACATG----GGGAAATTAGACTGAATTTTGTCTACGACTTCTTTTTTCCGGGAGTGAGGTAGCTCTTTGTGATTTTG
CTTTTGTAGTAACAGGATGCAGATGGGCTGTACCTAGCCTTTTTTTTCGATTCAGGGTCAGCTAGATCCCTGCCCGATAA
GCCAGTAGAAACAGATAGCAGGAAACGTTCAATGTGTACTGGTTCCTAGAGCGGTCGA----------------------
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---------TCGTTCGATCTGGGATCTACCCACATCCAGGGTCAGTTTAATATTGCGGTCCAAATTATATGACTAGAAAA
TATATTATTTGAAGTTTCTAATAATATAATTTTTGCGAT-----------------------------------------
---ATA--------------------------------------------------------------------------
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-----TAACTTGATCAAATTGTTAATCTAAAGGATACGCCGCAGCCCTAATAAA--------------------------
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>chr2D_1_TraesCS2D01G119300
TTTTTTTTGCTGGAACCGTGACTAGCAATTGTTGCAACCCGCGGATACGAGGGC-AACTTCCTTGGTGACCATGACGACA
GTTTCGCTACAACAGGACGAAGCCCGAGCTGGAACCAATAACTGGTTTGCTGTAGCCGACTTGAGTGGTTTTCTATGGCA
ACGACGGGGTGGAGTCTTGATTGTTGCTACCGGCGACCCTATTTTTACTGGAATCGGAGCCCTATTTTGTTGGGACTGGT
GCCCTGGCTTGCTACGACGTCCGCCCTGGGAGCTGCAAACATGGCGAGTTGGAACCATCATCTCGGTGGCTGCTGGGACC
GACGTCTCTAGCATGCCGGGGATCAGCATTGCGACGTGCTGACCAGGCGATTTGGGCAACAAATATAATCGCAATATTTC
AGAGCCGCGCCGTGTTGGAATCGGCCAACTTCCACACTGCAACTATCGGCGAGCACCCATGCTGGGGACGGGGGTGATGG
ACCGGTTCTGCGAGGGCGGCGACAACAGGGCAAGCGATGGCGAACTAGCGGTGCTTCGAGAGTCGGTCGGCATGCATCCA
TGGCAGGGTCAACGGCGCTCGCTATCGATATCTTCCTCATGTGACCGTGCGTGTCGACGTGATTTTTTGAGCAAAGTGAA
ACGATACGAGGGGAGATGGAGCTGGGGCACATTCGACGGCTGGGGATCGAGGCATTTGATGGCTCATGCAC---------
------GGCTTTCGGCCGTCGACCGCCGCCCTAAAAGATTACTATTACTTAAGGATAAAAGAGTTATGTAAGTAACTTAC
TCAGGCTAGTCGATCCACGCAGAGTGCCGCCCAAGAAAATTAATACTTATTTCGTCTGAAATTACTTGTCATACAAATAT
ATGTATCTAGATGTATCTTAGTTCAATACATTTATTTCTTTTTGTTTCTGTAAAAAGTAATCCGTGCAGACGAGTATTAC
TTCTCTTACTTCATACTTCAGGATAAAAGAGTTGCGACACTAACTTATT-------------------------------
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-----------------------------------------------------------------------------CTT
CTACACCCCGCAAAAAAAAAAAAAAAACTTACTCTTCTGCTCTGTCTTGCGTGTTTTCCCCTCGCCCGGCGCTCTTGGCG
CAAACCCTTGGGAGGCAGAGTCCAGCCATGGCGTGCGCGCTGCTGCCTGCAGGTGTGGCCGCGGTCCTACCGTCTCCTCG
CCGGAGCGCCGCCGCCTCGAAGGTAATTCGTCAACCACACTTTCTTCTACCCCCGTTTCATGGAGCAGGCATTCAGTCGA
ACAAGTTGTGGGCTCCGCCCCTAGATGGTTGACATAAACTGATGTGATGCTTGCGAGACTGCAATAGAGTTGGGCAACAA
ATATAATCGCAATATTTCAGAGCCTGCTAGTCAAAATTTTGTTTATTGGCTTGTATACATGACTGCCCCAAG--------
-------------------------------------ATGTTCACCCCTTTCTGTTGTTCAAATCTGAAGGTTGTAATAA
TAGTCCTGCTGGAACTTGAGCCACTCAAATTTTATCTCAGGAACGCCGGAGTACCGCATTCCTCATTAGTTGC---TACA
TTCTACTCCCGGTTTTCCAAAATATTCTCCTTTTGCCAATTGCGGTGCCTACCTTAGAAACAAGAAGCTGAATGATACTC
CCTCTGTAGATCTGTGGAGTACTTGTGTTCAATTTTCATTACTCTGCATAAGAACATGGTAGATCCCA----GCACCTAG
TTCAACCAGGTGCTTAAATCATTCATACTATGTCTAACCAGTT-AAACTCAATGGGTTGTTGTTGCTGCTGCTGCTTTCT
CAACCACCTGAATCTGAAATTCTAATACATCTTTACTCACAGGGACAGCGGAGTCAAGTTGCGTGCACGAACCAGCTTCA
CTGGAAGCAGCCTTTAAG------------------TGGTGAGTGCTGCATCCATTACAACCTGAAAGAATTTGAATGGA
AAAAGAGAAGTTATAATTCAGCATCTGATTTCATTTGGCCTGAGATTTTTATACTACTGATG--------GCAACTGCAG
AGCTCCACAGACCCAGGAGCCTTGTTGGCTGCTGCACATGTTCAGGTTCGTCGACAGGAGCAGCTATGTCA---AGATCT
GTAGATGCTGTAAGTTTTCATGCCGATGTATCTCTGAGAGACCCTGTGGATGCAGTTCTAGGTGCGCAGATAGTTATCTC
TGGCTACTGGATTGGTCCCGAGGTGGAAGATGGTTGTGGTCACGTTCATGCCATTCTGCAAAGAATTGGCTGATGATGTG
TCATGGTTAACAAGGTGATTTCCCTAATATTCGAACATAATCTAGTCTCTACTCTCTACTACCCACAGA-ATCCATATTG
TAATGTTTCTTTTGGGATGGATTAGTATGCGATCTCCTGCGGTCAAATCTGACATTGTGTTTGTTCTCGATGCCCCTGAA
GCAACATG----GGGAAATTAGACTGAATTTTGTCTACGACTTCTTTTTTCCGGGAGTGAGGTAGCTCTTTGTGATTTTG
CTTTTGTAGTAACAGGATGCAGATGGGCTGTACCTAGCCTTTTTTTTCGATTCAGGGTCAGCTAGATCCCTGCCCGATAA
GCCAGTAGAAACAGATAGCAGGAAACGTTCAATGTGTACTGGTTCCTAGAGCGGTCGA----------------------
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---------TCGTTCGATCTGGGATCTACCCACATCCAGGGTCAGTTTAATATTGCGGTCCAAATTATATGACTAGAAAA
TATATTATTTGAAGTTTCTAATAATATAATTTTTGCGAT-----------------------------------------
---ATA--------------------------------------------------------------------------
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-----TAACTTGATCAAATTGTTAATCTAAAGGATACGCCGCAGCCCTAATAAATTGAAAAGAGGTAGTAACACTACTGA
TCGGACCCATTAAGGCCTTGTACAATCCAAGGTGCTTTGCGGAGGTGCTTAGAGAAATAAATCAAGATTTTCCTAAGCAC
CGGTGCTTATTTGTTCAAGGTAGATGCTTAATTAGATGTCTCTTCTGTAGAAATAAAACTCAGTTTATTTTTCTAAGCAC
CTAGCATTGTTAACAAGACTGTTCGATGAATCAGTATCATTTCAACCATCGATATACTTGCACGCC--------------
--------------------------------------------------TCACAAATTCATGCATATCCATCTAGAGAT
ACTCA---------------------------------------------------------------------------
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------------------------------------------------------------------------AGAGATGG
ATTTGTTAATTAGCCACCCCGTATCTTCGCTGCACTAAGTAATCGGAGTCACCAATGCATGCATATCCATCAAG----AG
ATACTCCAGAGATGGATTCATCTGAGTCTATTTAAGACACGACCTCCAAATGAAGGACACACGCTCAACCGCCTTTCTGG
CTTCATCGAACATAGCCCTAGTATAGAGCTCGGAGGAATCAACCATGTCTGTTTTATATGCTTGTAAGCTCTGCCTCCTC
CTTGTTCTGCTGAATTCGGCCAGCCACACCGTCGCCGGCACTGTGGCACCACCGACACCGAGCGCGGGATTCAGTCTGCC
TATCGTGTCCAACCACAACACTGCTGGCATGCTCGGGCAGCTTGGCGCGAACCTCACGAGCATAGGTCCGCACATAGCCC
CCGTGGGGTGGCCCTTGTACGGCGTCCTCGTCGGCGTCGGCTCCGGCCAAACCCGGCACTTCTACAAGCTCGGGCTGGAC
CTCGTCAGCAATCTGACTTGGATGCAGTGCCAGCCCTGCGTGCCTGAGGTTCGGCAGGAGGGCGCCGTCTTCGACTCTGC
TTTGTCCCCTCGCTACAAGCACATGAAGCCCACAGACCCCAAGTGTACGGCCCCCTACACCCCCTCCAGCAGGAACCGGT
GCAGCTTCTACACCACCTCCTGGAACGTCGCCGCGCACGGCTACCTCGGCAGCGACACGTTTGCCTTCG
>chr2B_1
TTTTTTTTGCTGAAACCGCGATTGGCAATTGTTGCAACCCAGAGATACGAGGGCAAACTTCCTTGGTGACCATGACAACA
ATTTCGCTACAATAGGACGAAGCCCGAGCTGTAACCAACAACTTGTTTGCTGCAACCGACTTGAGTGGTTTTCTATGGCG
ACGACGGGGCGGAGTCCTGATTGTTGCTACCAGCGATCCTATATTTGCTAGAATCGGCGCCCTATTTTGTTGGGACCAGT
GCCTTGGCTTGCTACGGCGTCCGCCCTGGGAGCTCCAAACATGGCGAGTTGGAACCATCATCTCGCTGGCTGTTGGGACC
GACGTCTTTGGCATGCTGGGAACCGATGTTGCAACATGCTGACTAAGGGC------------------------------
---GTCGCGCCGTGCTGGAATCGGCTAACTTCCACACTGCAACCGTCTGCGAGCACCCATGTCGGGGATGAGGGCGATGG
AATGGTTTTGTGAGGGCGGCGACGGCACAGCAAGCGATGGTGAATCAGCGGTGCTCCGAGAGTCGATCGACATGCATCCA
TGGCGGGGTCAGCGGCGCTCGCTGACGGTCTCTTCCTCATGTGGCCGCGCGTGTCGATGTGTTTTTC-TAGCAAAGCGAA
ACGATACGAGGGAGGACGGAGCTGGGGCTCATCCGACGGCTGGGGATTGATGCAT---------------CTGACGGCTC
ACACACGGCTTTCGGCT-TCGACCGCCGCCCTAAAAGATTACTATTACTTCAGGATAAAAGAGTCACGACATGAACTTAC
TCAAGCTAGTTGATCCATGCAGAGTGCCGCCCTAGAAAATTAATACTAACTTCGTCTGAAATTACTTGTCGTAGAAATAT
ATGTAT----------TTTAGTTTTAAATACATCAATTTCA---------------------------------------
-------------------------------TTGAGACACTAACTTATT-------------------------------
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-----------------------------------------------------------------------------CTT
CTACACCCCGCAGG----AAAAAAACACTTAGTCTTCTGCTCTGTCTTGCGTGTTTTCCGC-CCCCCGGCGCTCTTGGCG
CAAACCCTTGGGAGGCAGAGTCCAACCATGGCGTGCGCGCTGCTGCCTGCAGGTTTGGCCGCGGCCCTACCGTCTCCTCG
CCGGAGCGCCGCCGCCTCGAAGGTAATTCGCCAACTACACCTCCTTCTAACCT-GTTTCATGGAGCAGGCATTCGGTCGA
ACATGACGTGGGCTCCGCCCCTAAATGGTTGACATAAACTGATTTGATGTTTGCGAGACTGCAATAGAGTTGGGCAACAA
ATATAATCGCAATATTTCAGAGCCTGCTAGTCAAAATTTCGTTTATTGGCTTGTATCCATGACTGCCCCAAG--------
-------------------------------------ATTTTCACCCCTTTCTGTTGTTGAAATCTAAAGGTTGTAATAA
TAGTCCTGCTGGAACTTGAGCCACTCAAATTTTATCTCAGGAACGCCGGAGTACCGCATTCCTCATTAGTTGC---TACA
TTCTACTCCCCGTTTCGCAAAATACTCTCCTGTTAAGG-----------------------AAGAAGCTGAATGCTA---
-------------------TACATGTGTTAATTTTCCATTACTCTGCATAAGAACATGACATATCCCGG-----------
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---------------------------CATCTTTGCTCACAGGGACAGTCGAACCAAGTCGCGTGCAGGGACCAGCTTCA
CTGGAAGCTGCCTTTAATCCTACATCTGATTTCATTTGGTGAGTGCTGCATTCATTACAACTTGCAAGAATTTCAATGGA
AACAGAGAATTTATAATCCTACATCTGATTTCATTTGGTCTGAGATTTTTGTACTAATAAATATCTGATTGCAACTGCAG
AGCCCCACAGATCCTGGAGCCTTGTTGGCCGCTGCACATGTTCAGGTTCGTCGACAGGAGCAGCTATGTCAAGGAGATCT
GAAGATGCTGTAAGTTTTCATACCGATGTATCTCTGAGAGACTCTGTGGATGCTGTTCTAGGTGCGCAGATAGTTATCTC
TGGCTACTGGATTGGCCCCGATGTGGAAGATGGTAGTGGTCATGTTCAGGCCATTCTGCAAAGAATTGGCTGATGATTTG
TCATTGTTAACAAGGTGATTTCCCTGGTATTCGAACATAATCTAGG-------CTCTACTACCCACAGA-ATCCAGATTG
TAATGTTTCTTTTGGGATGGATTAGTATGCGATTTCCTGCGGTCAAATCTGACATTTTGTCTGTTCTCGATGCCCCTGAA
GCAACATG----GGGAAATTAGACTGAATTTTGTCTGCGACTTCTTTTTTCCGGGAGTGAGGTAGCTCTTTGTGATTTTG
TTTTTGTAGCAAGAGGATGCAGATGGGCTGTACCTAGACTTTTTTTTCGATTC-GGGTCAGCTAGATCCCTGCCCGATAA
GCCAGTAG-AACAGATAGCAGGAAACGTTCAATGTGTACTGGTTCCTAGCGCGAACTTTATCGATCGAGCGGTCGATCGT
TCCTGGGAACGATTCGTTCTATCTGGGACCTACCCACATCTAAGGTCAGTTCAATATTGCGGTCCAAATTATATGACTAG
AAAATATATTATTTGAAGTTTTTAACAATATAATTTTTGCGATATATAACCTGATCAAATTGTTAATCTAAAGGATACAC
CACAGCCCTAATAAATTGAAAAGAGGTAGTAACACTTCCCCCTCCGTCCGGAACCGGTGCAGCTTCTACACCACCTCCTG
GAATGTCGCCGCGCACGGCTACCTCGGCAGCTACACGTTTGCCTTCGCCGGCAGCCCCGGCGCAGGAGGAGGACACAACA
CACACGTTGACAACCTCATCTTGGGTTGCGCACACACGACGGACGGGTTCGTGCGCCTGAGCCACAACATTCTCGCTGGT
GTCCTGAGCTTGAGCAGGCACCCGACGTCGTTCATGAGCCAGCTCACCGCACGCGGTCTGACGGCCGTCGACCGCTGCCC
TAAAAGATTACAATTACTTCTGGATAAAAGAGTTATGGCACAAACTTACTCAGGCTAGTCGATCCAGGCAGAGTGTCACC
CTAAAAAAATTAATACTCACTTCATCCGAAATTATCTGTCATAGAAATGGACGTACCTAAGATATATCTTAGTTCTACAT
ATATCTATTCCTTTTCATTTCCGCGACGAGTAATTCGTACCGAGGGAGGATAAAAGAGTTGCGACACTAACTTGTTCTTC
TACCCCCCGCAAGAAAAAACTTATTCTTCTGCTCTGTTTCCCGTCCGCCGGCGCTCTTGGCGCAAACCCTTGGGAGGCAG
AGTTCAACCATGGCGTGTGCGCTGCTGCCTGCAGATGTGGCCGCGGCCCTACTGTCTCCTCGCCGGAGCGCCGCCGCCTC
GAATGTAATTCGCCAACTACATCTCCTATCCTGTTCCATGGAGCAGGCATTCAGTCGAACAAGTTGTGGGCTCCGCCCCT
CGATGGTTGACATAAACTGATTCGATGCTTGAGAAATTACAATAGAGTTGGGAAACAAACATAATCGCAATATTTCAGAG
TCTGCTAGTCAAAATTTTGTTTATTGGCATGTATCCATGACTGCCCCAAGATGTTCACCCCTTTCTGTTGTTGAAATCTG
AAGGTTGTAGTAGTAGTCCTGCTGGAACTTGAACCACTCAAATTTTATCTCAGGAACGCCGGAGTGCCGCTTTCCTCATT
ACTTGCTACATTCTACTCCCCGTTTCCCTAAATACTCTCCTGTTAAGGAAGAAGCTGAATGATACATGTGTTCATTTTCC
ATTACTCTGCATAAGAACATTGATAGATCCCGGCATCTTTTTCAACCAGGTGTTTGTTCACATTATGGTTAACGAATTAA
AACTCAATGGGTTACCACTACTGCTTTTCTCAACCACCTGAATCTGAACTTCTGAAACATATTTGCTCATAGAGACAGCT
GAATCAGGTCGCGTGCACGAACCAGCTTCACTGGAAGCTGCCTTTAAGTGGTGAGTGCTGAATCCACTACAACTTGCAAG
AATTTCAGTGGCAACAGAGAATTTACAATCATGCATCTGATTTCATTTGGTCTGAGATTTTCGTACTAATAAATATCTGA
TTGCAACTGCAGAATCCCACAGATCCTGGAGCCTTGTTGGCTGCTGCACATGTTCAGGTTCGTCGACAGGAGCAGCTATT
TCAAGGAGATCTGCAGATGCTGTAAGTTTTCATACCGATGTATCTCCGAGAGACTCTGGATGCTGTTCTAGGTGCGCAGA
TAGTTATCTCTGGATACTGGATTGGCCCCAACATGGAAGATGGTAGTGGTCACGTTCAGGCCATTCTGCAAAGAATTGGC
TGATGATGTGTCATTGTTGACAAGGTGATTTCCCTGGTATTCGAACATAATCTAGGCTCTACTACCCACATAATCCAGAT
TGTAATGTTTCTTTTGGGATGGATTAGTATGCGACCTCCTGCGGAATCTGACATTTTGTTTGTTCTTGATGCCCCTGAAG
CAACATGGGAAAATTAGACTGAATTTTGTTTGCGACTTCTTTTTTCCGGGAGTGAGGTAGCTCCTTATGTTTTTGCTTTT
GTAGCAACAGGATGCAGATGGACTGTAGCTAGCCTTTTTTTTTCGATTCGGGGTCAGCTAGGTCCCTGCCCGATAAGCCA
GTAGAAATATATAGCAGGAAACGTTCAATGTGTACTGGTTCCTAGCGCGAACTTTATCGATCGAGCGGTCGATCGTTCCT
GGGAATGATTCGTTCGATCTGGGATCTACCCACATCTAAGGTCAGTTCAATATTGCGGTCCAAATTATATGACTAGAAAA
TATATTATTTGAAGTTTTTAACAATATAATTTTTGCGAT-----------------------------------------
---ATACTCCCTCCGTTCCAAAATATAGTGCTTCCTCTATTCTCGTGCTTCAACTTTGACCATAAATTTAACCAACGAGA
CCGACTGCGGCGGGAGCAAAAGTTATACCTGTGAATTCGTATTCAAATGAAGTTTTCAATTATATAATTTTTTCTCCCGC
CGCAGTTGGTCTCGTTGGTTAAATTTATGGTCAAAGTTGGACCATGGGAAGCGCGGGCGCACTATATTTTGGAATGGAGG
GAGTATAACTTGATCAAATTGTTAATCTAAAGGATACGCTGCAGCCCTAATAAATTGAAAAGAGGTAGTAGCACTACTGA
TCGGACCCA-----------------------------------------------------------------------
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---------TTAACGAGACTGTTCGACGAATCAGTATCATTTCAACCATCGGCATACTTGCACGCC--------------
--------------------------------------------------TCACAAATTCATGCATATCCATCTAGAGAT
ACTCCAGTGATGGATTGATTAATTAGCCGCCCTGTATCTTCGCTGCACCAAGTAATAGGAG-------------------
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---------------------------------TCACCAATGCATGCATATCCATCTAGAGATAGATACTCCAGAGATGG
ATTGATTAATTAGCCGCCCTGTATCTTCGCTGCACTAAGTAATCGGAGTCACCAATGCATGCATATCCATCTAGTGATAG
ATACTCCAGAGATGGATTCATCTGAGTCTACTTAAGACACGACCTCCAAATGAAGGAAGCAAGCTCAACCGTCTTTCTGG
CTTCATCGAACATAGCCCTAGTATAGTGATCAGAGGAATCAACCATGTCTGTTTTATATGCTTGTAAGCTCTGCTTCCTC
CTTGTTATGCTGAATTCGGCCAGCCACGCCGTCGCTGGCAATGTGGCACCACCGACACCGATCGCCGGATTCAGTCTGCC
TATCGTGTCCAACCACGACACGCCCGGCAGGCTCGGGCAGTTTGACGCGAACCTCACGAGCATAGGTCCGCACATAGCCC
CTGTGGGGTGGCCCTTGTACGGCGTCCTCGTCGGGGTCGGCTCCGGCCAAACCCGGCACTTTTACAAGCTCGGGCTGGAC
CTCGTCGGCAATCTGACTTGGATACAGTGCCAGCCCTGCGTGCCCGAGGTTCGGCAGGAGGGCACCGTCTTCGACTCTGC
TAAGTCCCCTCGCTACAAGCACATGAAGCCCACAGACCCCAAGTGCACACCCCCCTACACCCCCTCCGGCCGGAACCGGT
GCAGCTTCTACTCCACCTCCTGGAATGTGGCCGCACACGGCTACCTCGGCAGCGACACGTTTGCCTTCG
>chr2A_2
-TTTTTTTGCTAGAACCGCGATTGGCAATTGTTGCAACCCGCGGATACGAGGGAAAACTTCCTCGGTGACCATGACGACA
GTTCCGCTACAATAGGATGATGCCTGAGCTGGAACCACCAACTGGTTTGCTGCAACCGACTTTAGTAGCTTTCTATGGCG
ACGATGGGGCAGAGTCCTGATTGTTGCTACCGGCGCCCCTATTTTTGCTAGAATGGACGCCCTATCTTGTTGGGACCGGT
GCCCTGGCTTGCTACGACTTCCGCCTTGGGAGCTGCAAACATGGCGAGTTGGAATCATCATCTCGATGGCTGCTGGGACC
GGCGTCTCTGTCATGCTGGGAATGGGCGTTGCGACATGCTGACTG-GGGC------------------------------
---GCCGCACCGTGCTAGAATCGGCCAACTTCCACACTGCAACCGTTGGCGAGCACTCATGTTGGGGACGGGGC-GATGG
ACCGGTTCAATGAGGGCGGCGACGACGCGGCAAGCAATGGTGAACCAGCAGTGCTTCGAGAGTCGGTCGGCATGCATCCA
TGGCAGGGTCAATGGTGCTCGTTGTTGATCTCTTTCTCATGCGGTTGTGCGTGTCGACATGATTTTTTTAGTAAAGCAAA
ATGATATGAGGGAGGACAAAGCTGGGGCTTATCCAACGGCTAGGGAACGACGCAT---------------C---------
------GGCTTTCAGTCGTCGATCGCTGCCCTAAAAGAGTACTATTACTTCAGGATAAAAGAGTTATGACACTAACTTAC
CGAGGCTAGTCGGTCCATGCAGAGTGTCGCCCTAGAAAATTAATACTCACTTCGTTCAAAATTACTTGTTGTAGAAATGG
ATGCATCTAAATGTATTTTAGTGGTAGATATATTTATTTTTTAATTTCTACTACAAGTAATTCGTACCGAGAAGTAT---
-------------TACTTCAGGATAAAAGAGTTGCGACACTAACTTATGCTTCTACATCGAAAATTCTAAACCAACGGAC
TATTACAGGCCTATTACGGGGGTTTGTTCGTTAACTAATCTTCACCCCCTGATTTTCAAAGGATGTGGGCCCCTCATCAT
TCTTTCTTCCAATCACAAGGTCCCAGCTAAGCTTCCCCCGTAAAACTCCGTTGTCATCTGTCCGTGTAGCAAAGCTCCTT
CTACACCCCGCAAAAAG-----AAAAACTTTTTCTTCCGCTCTGTCCTGCGTGTTTTCCCGTCCCCCGGCGCTCTTGGCG
CAAACCCTTGGGAGGCAGAGTCCAACCATGGCGTGTGCGCTGCTGCCTGCAGGTGTGGCCGCGGCCCTACCGTCTCCTCG
CCGGAGCGCCGCCGCCCCCAAGGTAATTCGCCAACTACACCTTCTTCTACCCCCGTTTCATGGAGCAGGCATTCAGTCGA
ACAAGTTGTGGGCTCCG-CCCTAGATGGTTGACATAAACTGATTTGATGCTTGCGAAATTGCAATAGAGTTGGG------
---TAATTGCAGTATTTCAGAGCGTGTTGGTCAGAATTTTGTTTATTGGATTGTATCCATGACTGCCCCAAGCCCCCAAG
ATTTTCTTAATTTTTTTTTAAACCCCAAGCCCCCAAGATGTTTACCCCTTTCTGTTGTTGAAACC-GAAGGTTATAATAA
TCGTC-----------------------------------------------------------ATTAGTTGCTAGTACA
TTCTACTTCCCGTTCCCC-AAATATTCTCCTTTTGCCAGCTGCAGTGGCTACCTTAAAAACAAGAAGCTGAATGATAC--
----------------------ATGTGTTCATTTTTCATTACTCTGCATAAGAACTTGATAGATCATTCTTGGCATCTAG
TTCAACCAGGTGCTTGAATAATTCACATTATGGTTAACCAATTAAAACTCAATGGGTTGCCGCTACTGCT-----TTTCT
CAACCACCTGAATCTGAACTTCTGAAACATATTTGCTCACAGGGACAGCCGAACCAAGTCGCGTGCACGAACCAGCTTCA
CTGTAAGCTGCCTTTAAG------------------TGGTGAGTGCTGCATTCATTACAACTTGCAAGAATTC-AATGGC
AACAGAGAAGTTATAATCCTACATCTGATTTCATTTGGTCTCAGATTTTTGTACTAATAAATATCTGATTGCAACTGCAG
AGCCCCACAGATCCTGGAGCCTTGTTGGCTGCTGCACATGTTCAGGTTCGTCGACAGGAGCAGCTATGTCAAGGAGATCT
GCAGATGCTGTAAGTTTTCATACCGATGTATCTCTGAGAAACTCTGTGGATGCTGTTCTAGGTGCGCAGATAGTTATCTC
TGGCTACTGGATTGGCCCCGATGTGGAAGATGGTAGTGGTCATGTTCAGGCCATTCTGCAAAGAATTCACTGATGATGCG
TCATTGTTAACACGGTGATTTCCCTGGTATTTGAACATAATCTAGG-------CTGTACCACCCATAGAAATCCGGATTG
TAATGTTTC-TTTTGGTATGGATTT------ATCTCTGGCGGTCAAATCTTCCATTTTGTTTGTTCGCGATGCCCCTGAA
ATAACATGGGGAGGGAAATTAGACTGAATTTTGTCCGCGACTTCTTTTTTCCGAGAGTGAAGTACTCCTT----------
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>chr2A_2155
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----------------------------------------CACGTTCATGCCATTCTGCAAAGAATTGGCTAATGATATG
TCATTGTTAACAAGGTGATTTCCCTGGTATTCGAACGTAATCTAGG-------CTCTACTACCCACAGA-ATCCATATTG
TATTGATTC-TTTTGGATGGATTAGTATGCGATCTCCTGCGACCAATGT---CATTTTGTTTGTTCTCGATGCCCCTGAA
GCAACATG----GGGAAATTAGACTGAATTTTGTCTTTGACTTCTTTTTTCCATGAGTGAAGTAGCTTTTTGTGATTTTG
CTTTTGTAGCAAG-------------------------------------------------------------------
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----------------------------------------------------------------CACAATAGATTGTCAA
AAGATTAGCGGCATCCAAGAATGCATTCACCCGTCTGGTCCATGTTCACCCATGTTCGAAATGCATTTTTTTTACTCTGC
TGAAACTAGAAAAGA-----------------------------------------------------------------
------------------------------------------------------TCTGGATGATGTTTGCAT--------
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---------TATTGTAGGAAACACTAGAAGTGAACGGAATATGCACCAACAGTTAGCTGACAAGCGACGATGTTGTTGGT
ACAGCACCAACTTATGTGAGCTCAGAGC--------------------------------------------------AA
AATATACCTAGAAATTGTAGGCACTATACTTGTTTGTTTGCACGAATTTGACTTCTTGGAAGAAAAGCAACAAAATACAT
CAAATACTCCCTCCATTCCTAAATATAAGTTTTTTTTAGAGATTCTAATATGAATTACATATAAAGCAAAATGAGTGAAT
CTACACTTTAAAATACGTATGTACTCCA-----------TATTCAAATCTCTAAAAAGACT-------------------
--------------------------------------------------------------TATATTCAGAAACTGAGG
GAGTAGAATTTATATAAATTAGCTACTCACTCTAGCTCATAACAACGACAAATTTTAA----------------------
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------------------------GATGAATTAGTCCTGATGCCACTCTCGATGCCCGTGCGGCAGATGAGATACTCTTG
GAGGTACAGGGGCGAGCAAAGGGCACAAGCTTCGGATGTTGTTCAACGCTTCACTCGCCGCAA------CCTCTGGATAA
ACTAAAATGAAGGATTGATACTTTTGCATGCCCATCAAACAGGGGTAAAAGTACACCACATTCCGGGCCGCAGAAGGGAA
CCTCTCAGTGGGAGAGGGACGGGCATGCCCCATCCCCAACGAACACAGCGCGGCATCCGCCGGTGTCCTCTTACCTTGTG
AATTTTTTAAAATTTGTGAACCTTTTCATATCCTTGAATTTTTTAAATTCTAGACTTTTTGTAAATGGGCGAACATTTTT
ATAATTCATAAGCTTTTTCCAAATCCATGAACTTTTTTCAAATTCATAAACATATCTGAACTTCATGAATATTTTTTCGA
ATTCGTGAGCATTTTTAAAACATTCGCCCATAGCTTGTGGGCTGTGAGCGCCGTAGCGATTTTTTGGCGCCTGAAGTGCC
GATTAGGAGCTCTCACAATTATCGACATTTAATATTTTTTACGGAAGGTTCCCTTGGTCGCACCGTTTTGGTCGTTCGTT
TCCGTAAACCCGAAAGGAGGGAGTACTATTGACAAAAACTCATTAATAAGGTTGTTGGAGGAATTAGGGAGCTTTCG-TA
TCATTTCAACCATCGACATGTCGAGTATTCTCCTCACCAATGCATGCATATCCATCTAGAGATACTTCAGAG-----TCG
ATTGATTAATTAGCCGCCCTGTATCTTGGCTGCACTAAGTAATCGGAGTCACCAATGCATGCATATCCATCTAGAGATAG
ATACTCCAGAGATGGATTCTTCTGAGTCTATTTAACAGACGACCTCCAAATGAAGGACGTACGCTCAACCGTCTTTCTGG
CTTCATCGAACATAGCCCTAGTATAGAGATCGGAGGAATCAAGCATGTCTGTTTTATATGCTTGTAAGCTCTGCTTCCTC
CTTGCTCTGCTGAATTCGGCCAGCCACGGCGTCGCCGGCAATGCGGCACCACCGACACCGAGCGGTGGATTCAGTCTGCC
TATCGTGTCCAACCACGACACAGCCGGCGGGCTCGGGCAATTTGACGCGAACCTCACCAGCATAAGTCCGCACATAGCCC
CCGTGGGGTGGCCCTTGTACGGCGTCCTCGTCGGCGTCGGCTCCGGCCAAACCAGGCACTTCTACAAGCTCGGGCTGGAC
CTCGTCGGCAATCTGACTTGGATGCAGTGCCAGCCCTGCGTGCCTGAGGTTCGGCAGGAGGGCGCCGTCTTCGACTCTGC
TGAGTCCCCTCGCTACAAGCACATGAAGCCCGCAGACCCCAAGTGTACGCCCCCCTACACCCCCTCCGGCCGGAACCGGT
GCAGCTTCTACACCACCTCCTGGAACGTCGCCGCGCACGGCTACCTCGGCAGCGACACGTTTGCCTTCG
>chr2A_2950
TGCCTATCCATCTA------------------------------------------------------------------
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--------------------------------------------------------------------GAGATACTCCAG
AGATGGATTGATTAATTAGCCGCCCACTTCGCTGCACTAAGTAATCGGAGTCACCAATGCATGCATATCCATCTAGAGAT
ACTCCAGAGATGGATTGATTGATTAGCCGCCCTGTATCTTCGCTGCACTAAGTAATCAGAGTCACCAATGCATGCATATC
CATCTAGAGATATAGATACTCCAGAGATGGATTCATCTGAGTCTATTCAAGACACGACCTCCAAATGAAGGACGCACGCT
CAACCGGATACTCCACTATTTTTAGGGGATCGGTTAGAAATGCCC-----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------TAACAAGGTTGTTGGAGGAATCAGTTTAGGGAACATA
TCATTTCAACCATCGACATATTGAGTTCTCTCCTCACCAATGCATGCATATCCATCTAGAGATACTTCAGAG-----TGG
ATTGATTAATTAGCCGCCCTGTATCT-CGCTGCACTAAGTAATCAGAGTCACCAATGCATGCATATCCATCTAGAGATAG
ATACTCCAGAGATGGATTCATCTGAGTCTATTTAAGACACGACCTCTAAATGAAGGACACACTCTCAACCGTCTTTCTGG
CTTGATTGATCATAGCCCTAGGATAGAGATCGGAGGCATCAACCATGTCTGTTTTATATGCTTGTAAGCTCTGCTTCCTC
CTTGCTCTGCTGAATTCGGCCAGCCACGCCGTCGCCGGCAATGTGGCACCACCGACACTGAGCGCCGGATTCAGTCTGCC
TATCGTGTCCAACCACAACACAGCCGGCGGGCTCGGGCAGTTTGACGCGAACCTCACGAGCATAGGTCCGCACATAGCAC
CCGTGGGGTGGCCCTTGTACGGCGTCCTCGTCGGCGTTGGCTCTGGCCAAACCCGGCACTTTTACAAGCTCGGGCTGGAC
CTCGTCGGCAATCTGACGTGGATGCAGTGCAAGCCCTGCGTGCCCGAGGTTCGGCAGGAGGGCGCCGTCTTCAACTCTGC
TGAGTCCCCTCGCTACAAGCACATGAAGCCCGCAGACCCCAAGTGTACGCCCCCCTACACCCCCTCCGGCCAGAACCGGT
GCAGCTTCTACACCACCTCCTGGAACGTCGCCGCGCACGGCTACCTCGGCAGCGACACGTTTGCCTTCG
>SNPs
------------------S--S-S--------------------------------------------------------
------------S-------------------------S-------------S-S------------------------S
---------S------S-----------------------------S--S-------S------------------S---
-----------------------------------------------------------------S--------------
---------S------S---S---S--S-------S-------S-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------S----------------------------SS----------------S------------S-----
----------S------------S---S------------S----S----------------------------------
-----------------------S-----S-------------S------------------------S-------S---
------------SS--S-----------S---S-----------------S----SSSSSSSSSSSSSSS----------
--------------------------------------------------S-----------------SS-S--------
-----------------S--------------S--------------S-S--------------------S--S------
---------S------S------SS-S-S--S-S-S-S----SS-----SSS-S-------S---S-S--SS-----SSS
SSSSSSSSSSSSS-------------------------------------------------------------------
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----------------SS-------------S-------------------------------S----------------
------------------------S---------------------------------------S---------------
------------------------------S----S----S---------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------S-----------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
----------S----S----------------------SS---S---S--------S---------------------SS
SSSSSSSSSSSSSSSSSSS---S--------S--------------------------S--------S-------S----
---------------S---S-----S-S----SS------S------------------SS-S-S-----SSSSS-----
------------------S----S-S--------S--------------S--SS-----S--------------------
--------S------------------------------------------S---------S--S--------S------
--S--------------S-SS-----------------S-----------S-----S-S-SS------------------
---S-------S--S-----------------------------------------------------------------
-S-------------------S--------------------S----------S--------------------------
---------------S-----S------------S---------------------------------------------
----S--------------------SS------------------SSSSSSSS---------------------------
--------------------------------------------------------S-----------------------
------------------------------------S-------------------------------------------
---------S--S------------------------S---------------S--------------------------
--------S----------------------------------------S---SS-SS----------------------
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------------------------------------S-S--------S--------------------------------
-----------------S---S----------------------------------------------------------
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---------------------------------------S------------------------------S---------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS-----S-----------------------------------------------------------------
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---SS----------S---S---------------------------------------------------S--------
-----------------------------------------------------------------------S--------
----------------------------S---------------------------------------------S-----
---------------------------S------------S------------------------S--------------
---------------------S--S----S----------S---S-----------------------------------
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------S-------------------------------------------------------------------------
-SS----------------------------------------------S-----------------S--S---------
---------------------------------------------------------------------
>forward_699
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---------------------------------------CTGGGGATCGAGGCATTTGA---------------------
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>reverse_1980
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-----------------------------------------------------------TTGTTGCTGCTGCTGCTTTC-
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>forward_700
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----------------------------------------TGGGGATCGAGGCATTTGAT--------------------
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>reverse_2435
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----------------------------------TGTGGTCACGTTCATGCCAT--------------------------
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>forward_2252
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------------------------------------------------------------------------AACTGCAG
AGCTCCACAGAC--------------------------------------------------------------------
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>reverse_5622
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---------------------ACAATCCAAGGTGCTTTGCG---------------------------------------
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---------------------------------------------------------------------
