>input_sequence_44502
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-------------------------------------------------ATGCGGATCCGCAGGGCCGCCTCCCGCGTGC
TCGGCGTCGCCCCCTCCGCCGCCTCCCCCTCCCAGCCGCCCCGACCCAATCTGCCCCCGCTCCCGCCAGCCGACGCCGGC
GGCCCGCCGCCCTGCGTGACGAACATGGCGGTAGCGGACCTGATGAACCAACTCGGCATCCAAGATCCCGAGGTAATTTT
CTTGC-----CCCACTCGATGCATGCTCGTAGC--TTGCCGTATCC------TGCATCTTGGATGTATTGCCCATTTCCG
CGCCGCCGGTCGCCGGTCCCTGTACAGCAGCGTGC-GATCCCCC----TCCCTTGCTAGATCTCGTTTTTCGAGGTTGCC
CATCCGGCCGCTGCTGCTCGCGCGCTGGTCTGGCTCGTCCGCCCGGACACGTCCCTGCT-------AGGGTTTCCATCCC
TCCGCGCCCC-------------------------------------TCGCGTTTGCTTGCTTGTTTATGCAGGC-----
-----------GCGGTAATCTGCGGCCAGCCAGCCGGCGGCGGCGTGCCTGCAAGGGTTGGAAACGATGTGAGCCGTACC
TACGTGCATCCACCCTATTTCAGTTACATGTACATGTGTGCGTCG-AAATGCATGTATTTTCCGATTTTTGC----TTTT
TTTCATACCATCCTCACAAAGGATCAGGTTCCACAATCTAACGATAATGAAACAAAACCAAGGTGCAGCAGCATGAGTAT
CCAAGTGCAACAAGAAAAGAGTTCAGCTGCCGCAAAATGCTAACAGCAAAGAT-AAAGAACAACAGTAACAAAAGTTTTG
ACCTAACCAGAGGGCACCTAAACCTACAATTCAGATCAACCTCCACCAACACTTTGCCTGCTGTCATGTACTTCCTTCAC
TGCACCCCCCCTATAACTCAGCATTATTTTTCATTATTGTATATCTCTTTTCTTAACCAGGGGCTCATTTTT------TT
TCACTTTTCATGTTTTTCAGGATGACAAGCACTTCAAGGAAACTTACTTTTGGGATGGCCTTCCTAGCCTTCCCAAACAC
CACCCCTGGGGATCTAGGTATCATTTCCCAGCCACCACCTGTGCCGACTCCATTGAGGAAAAAGAGGAGATGGCCGTTGA
CGTGCTAGATGACATCATCTTGGAATCGCGTATCGTGGAGAAGAACTCTGAGAAAAACAAAAGCACCATGACGAAGGGTG
AGGAAGAGAAGGACAAGAGCAAGCTAGAGACA------AAAGGGAAGGGGAAGGTGGAGGCAGATGAGAGTTATGCTGCC
AGAGGAGGAT----GGCCATGCAAGCAGAATGAAAG------GCGATTCTGCGGGCGGACCGCAAGCCAACCCAACTCGT
ACTGCTTGCACCACTCTCACCAGAAGCCCCGTGCCATCTCGAAGCCACCTC---GCAAGAGGATCACTGCCCACCGTGAC
TTGGGACTAGGGTTCTACTACTACGATGGGTTCGGCCCGTCAGGCAACACCAAGAGGCAACGCGGATCAAGCAGTTTGCC
AGAACCTATTGAACAGAAAGAGGAGGTGTCGCCTGAACACCACGTCGATTTTAGTGCAGGTCTGGTTGGAGTTGCTGACG
AAGAAAATCAAGTCGGGTCAGAGTCAGAATACATTGAAAAGCCTAGGTTCGACGATTGTACTGATGTCATGATCACTGGC
TACGACGATGACAACAGTGATGAAGACTCGCCTGATTACAATAGCGAAAACATTAAGGTGAGCAAGAACCCGCCAAAGAA
GAGGGGAAAGAAGCCTATGAAAGCCCGATCACTCAAGTCATTGATGTGA-------------------------------
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>chr5B_1_TraesCS5B01G511200
TGAATCCTTCCAATCTACACTACTCTTCATCGGCGGCGGTTGTTATTCTACTGCGGGTCCTATGGGGCCTTAGCACGACG
ACTTCCTGACTGTACTACAACAAGTTTTGCCTGGCTCTGGCGAAGGAGGGGCAATGACGGCGGCGCGTCTTCGGCTCGCT
TCAATGCTTGTAGTCGTCGCTAGATGGTCTACGGATCTAGATGTATTTTTTTATTATTTTTAGTGTTGGTTGTATTGCCA
TGATTGAAAATGAATAGATTGAAAATTTTCTTGCAAAAAAAAAAAAACATACAGGAACAGGATATCACTGTCTTAGGCTC
GGAAAACTAGGCAATTTAATTAAGCAATAAGGATTACCAGATTCTATATGTAACTTGTATTTGATAATCCCTCCGTTTCA
GTTTACAAGTCATGCACGTATACCTAGGTTGCCAATTTTGTCACCCTAATATAATCTATATATCACAAAAATTATATCTT
TTGAAAATAGAACAGTTGAAGTTTATATTGGTATATTTTTTGTAATATATGACTTGTATTAGATTGGTCAAATTGACGAC
CTAGAGATACGCACACGCCCTATAAATTGAGAGAGATGGAGTATGAATACAGGGCGCAAGGCATCTCGTGGTGTACCCTG
AGGTTTTTTCTTGTGTATGTGTGTGAACTTGGTGTACACTGATTTTGGTTTTGGGTATGTTTTTTT---CTGTCAGAACA
GGGGACACGTGGAAGAGAAGGTGTGGGTGTGGGCCATCAAACAACCAAT--CACAGCCGCTAAGCCTGCTGGAG--GACG
GATGTGAGCAAGCCCTGTCCGCCA-CTCTCAGCAAAATCGCTGCCGTCGGTGACAAGTGGGGCCTCGTCCACCTCACACT
GGTCTTCGCGTGTCCTGCCTTCGTCTCAGTTAGTCCTGCCTCTTGCCCAAATCGCAAACCCTACCTCGCCAGCGCCACC-
CTCCAGATCCGGAGAGCTCCCCTCGTTCTCCGTCCCTCCGGCGCCAGCCATGCGGATCCGCAGGGCCGCCTCCCGCGTGC
TCGGCGTCGCCCCCTCCGCCGCCTCCCCCTCCCAGCCGCCCCGACCCAATCTGCCCCCGCTCCCGCCAGCCGACGCCGGC
GGCCCGCCGCCCTGCGTGACGAACATGGCGGTAGCGGACCTGATGAACCAACTCGGCATCCAAGATCCCGAGGTAATTTT
CTTGC-----CCCACTCGATGCATGCTCGTAGC--TTGCCGTATCC------TGCATCTTGGATGTATTGCCCATTTCCG
CGCCGCCGGTCGCCGGTCCCTGTACAGCAGCGTGC-GATCCCCC----TCCCTTGCTAGATCTCGTTTTTCGAGGTTGCC
CATCCGGCCGCTGCTGCTCGCGCGCTGGTCTGGCTCGTCCGCCCGGACACGTCCCTGCT-------AGGGTTTCCATCCC
TCCGCGCCCC-------------------------------------TCGCGTTTGCTTGCTTGTTTATGCAGGC-----
-----------GCGGTAATCTGCGGCCAGCCAGCCGGCGGCGGCGTGCCTGCAAGGGTTGGAAACGATGTGAGCCGTACC
TACGTGCATCCACCCTATTTCAGTTACATGTACATGTGTGCGTCG-AAATGCATGTATTTTCCGATTTTTGC----TTTT
TTTCATACCATCCTCACAAAGGATCAGGTTCCACAATCTAACGATAATGAAACAAAACCAAGGTGCAGCAGCATGAGTAT
CCAAGTGCAACAAGAAAAGAGTTCAGCTGCCGCAAAATGCTAACAGCAAAGAT-AAAGAACAACAGTAACAAAAGTTTTG
ACCTAACCAGAGGGCACCTAAACCTACAATTCAGATCAACCTCCACCAACACTTTGCCTGCTGTCATGTACTTCCTTCAC
TGCACCCCCCCTATAACTCAGCATTATTTTTCATTATTGTATATCTCTTTTCTTAACCAGGGGCTCATTTTT------TT
TCACTTTTCATGTTTTTCAGGATGACAAGCACTTCAAGGAAACTTACTTTTGGGATGGCCTTCCTAGCCTTCCCAAACAC
CACCCCTGGGGATCTAGGTATCATTTCCCAGCCACCACCTGTGCCGACTCCATTGAGGAAAAAGAGGAGATGGCCGTTGA
CGTGCTAGATGACATCATCTTGGAATCGCGTATCGTGGAGAAGAACTCTGAGAAAAACAAAAGCACCATGACGAAGGGTG
AGGAAGAGAAGGACAAGAGCAAGCTAGAGACA------AAAGGGAAGGGGAAGGTGGAGGCAGATGAGAGTTATGCTGCC
AGAGGAGGAT----GGCCATGCAAGCAGAATGAAAG------GCGATTCTGCGGGCGGACCGCAAGCCAACCCAACTCGT
ACTGCTTGCACCACTCTCACCAGAAGCCCCGTGCCATCTCGAAGCCACCTC---GCAAGAGGATCACTGCCCACCGTGAC
TTGGGACTAGGGTTCTACTACTACGATGGGTTCGGCCCGTCAGGCAACACCAAGAGGCAACGCGGATCAAGCAGTTTGCC
AGAACCTATTGAACAGAAAGAGGAGGTGTCGCCTGAACACCACGTCGATTTTAGTGCAGGTCTGGTTGGAGTTGCTGACG
AAGAAAATCAAGTCGGGTCAGAGTCAGAATACATTGAAAAGCCTAGGTTCGACGATTGTACTGATGTCATGATCACTGGC
TACGACGATGACAACAGTGATGAAGACTCGCCTGATTACAATAGCGAAAACATTAAGGTGAGCAAGAACCCGCCAAAGAA
GAGGGGAAAGAAGCCTATGAAAGCCCGATCACTCAAGTCATTGATGTGATAAGAGCACGGTCGCACTTGTGTCTCTGTGG
CATGTG------GAAACAATATAGTAGAAACTATATGGATATTTTGTTGCACTGTTTTTTAACTGTGGTACTGTGGTGCT
AGCATTTGCACTAGCTATTAAA--------------------AGAGTTCCATATACTCCAATATAC--------------
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----------------------------------ATATATGATATATATATGGTGCCTGGTCATTGTGATGGGCGAGATG
CGGTCAATTTTTACCGTGAATGGTTTATTTGTTTATTTTGTGCAGTTAGTTTATGCAATGGTGTGTGCTAGGCATTTGGT
TCCTGAAAACCGATGAATGATTGTGGTACTGGGCTCAAGGAGACGGATGCCCCACCTTCCAGCCCGGAGATCAATGTCTG
AACATGATATAGCTTAATACAGAATAAACCACGATTCATTGAATTACTATGGATACAAATTATTAAGTTTACAATACTCT
TGTGAAGCAAGGCGGCACTACTCGTGCGGCGACACTCTATACCTTA-TTTTTCG--AACAACTCCGCCTCGAAAACTAAT
ACAGGAAGCGGTATAATACAACAGAAAAGCATGATGATGGCAGGACTCCAATTGAAAGGGACACCATTGGGTCAGATCCT
AGTGCGCACTCACGGAATCCTTAACTACGACATCTTTAGCATCTGGCATGAAAAGGCAGGTGATTACTTTGAATGTACTC
GCAAGCTCTCAAACAATCCAAAAAGCAAGCAAGCAAGCTCTAGAACACATCAATCGAAAAGAAACAGGTTAAAGACATAA
ATTGTAAGTACAACAGTTCTAACTGAAGCAAATACTCATCGCATGATCATTTAACATTGCATGGACCCTCTCTCAGCATA
ATCCCCGGCCATTCGATTCACTTCTCCTAGCCACCTCGTGATCAACCCAACTTTCCCTGGCGTTTCTTCATTTCGAC---
-ACTTAGTTTACTTTGTTCATGACCT-GATCATATAGTGTGACTTAACACGAATTGTGTCCCACTAT----GACTCGTCT
ATTTGTATAGATTAT
>chr5D_602
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-----------------------------------------TATGAATACAGGGTGCAAGGCATCTCGTGGTGTACCCTG
AGG-TTTTTTTTGTGTGT----GTGAACTTGGTATACCCTGATTTTGGTTTTGGGTATGTTTTTTTTTTCAGTCAGAACA
GGGGACACGTGGAAGAGAAGGTGTGGGTGTGGGCCATCAAACAACCAAT--CACAGCCGCTAAGCCTGCTGGAG--CACG
GATGTGAGCAAGCCCTGTCCGCCA-CTCTCAGCAAAATCGATGTCGTCAGTGACAAGTGGGGCCTCGTCCACCTCACCCT
GGTCTTCGCGTGTCCTGCCTTCGTCTCAGTTAGTCCTGCCTCTTGCCCAAATCCCAAACCCTACCTCGCCAGCGCCACC-
CTCCAGATCCCGAGAGCTCCCCTCGTTCTCCGTCCCTCCGGCGCCAGACATGCGGATCCGCAGGGCCGCCTCCCGCCTGC
TCGGCGTCGCCCCCTCCGCCGCCTCCTCCTCCCAGCCGCCCCGACCCAATCTGCCTCCGCTCCGGCCAGCCGACGGCGGC
GGCCCGCCGCCCTGCGTGACGAACATGGCGGTAGCGGACCTGATGGACCAACTCGGCATCCAAGATCCCGAGGTAATTTT
CTTGC-----CCCACTCGATGCATGCTCGTAGCGCTTGCCGTATCC------TGCATCTTGGATGTATTGCCCATTTCCG
CGCCGCCGGCCGCCGGTCCCTGTACAGCAGCGTGC-GACCCCCCTTGATCCCTTGCTAGATCTCCTCTGCCGAGGTTGCC
TATCCGGCCGCTGCTACTCGCGCGCGGGTCTGGC-CGTCCGCCCGGACACGTCCCTGCT-------AGGGTTTCCATCCC
TCCGCGCCCC-------------------------------------TCGCGTTTGCTTGCTTGTTTCTGCAGGC-----
-----------GCGGTAATCTGCGGCCAGCCAGCCGGCGGCGGCGTGCCTGCAAGGGTTGGAAACGATGCGAGCCGTACC
TACGTGCATCCACCCTATTTCACTTACATGTACATGTGTGGATCG-AAATGCATGTATTTTCCGATTTTTGC----TTTT
TTTCATACCATCCTCACAAAGGATCAGGTTCCACAATCTAACGATAATGAAACAAAACCAAGGTGCACCAGCATGAGTAT
CCAAATGCAACAAGAAAAGAGTTTAGCTGCCGCAAAATGCTGACAGCAAAGACAAAAAAACAACAGTAACAAAAGTTTTG
ACCTAACCACAGGGCACCTAAACCTACAATTCAGATCAACCTCCACCAACACTTTGCCTGCTGTCATGTACTTCCTTCAC
TGCAG-CCCCCTATAACTCAGCATTATTTTTCATTATTGTATATCTCTTTTCTTGACGAGAGGCTCATTTTTTTAATTTT
TCAATTTTCATGTTTTTCAGGATGACAAGCACTTCAAGGAAACTTACTTCTGGGATGGCCTTCCTAGCCTTCCCAAACAC
CATCCCTGGGGATCTAGGTATCATTTCCCAGCCACCACCTGTGCCGACTCTATTGAGGAAAAAGAGGAGATGGCCGTTGA
CATGCTCGATGACATCATCTTGGAACCGCGTATCGTGGAGAAGAACTCTGAGAAAAACAAGAGCACCACGACGAAGGGTG
AGGAAGAGAAGAACAAGAGCAAGCAAGAGACA------AAAGGGAAGGGGAAGGTGGAGGCAGATGAGAGTGATGCTGCC
AGAGGAGGAT----GGCCATGCAAGCAGAATGAAAG------GCGGTTCTGCGGGCGGACCGCGAGCCAGCCCAACTCGT
ACTGCTTGCACCACTCTCACCAGAAGCCTCGTGCCATCTTGAAGCCAGCTCATAGCAAGAGGATCACTGCCCACCGTGAC
TTGGGACTAGGGTTCTACTACTATGATGGGTTCGGCCCGTCAGGCAACACCAAGAGGCAACGCGGATCAAGCAGTTTGCC
AGAACCTATTGAACAGAAAGAGGAGGTGTCGCCTGAACACCACGTCGATTTTAGTGCAGGTCTGGTTGGAGTTGCTGACG
AAGAAAATCAAGTCGCGTCGGAGTCAGAATACATTGACAAGGCTAGGTCCGACGATTGCACTGATGTCACAATCGCTAGC
TACGACGATGGCAGCAACGATGAAGACTCGCCTGACTACAATGGCGAAAACATTAAGGTGAGCAAGAACACATCGAAGAA
GAGGGGGAAGAAGCCTTTGAAAGCCCGATCACTCAAGTCATTGATGTGATAAGAGCACGGTCGCACTTGTGTCTCTGTG-
-----G------GAAACAATATAGTAGAAACTATATGGATATTCTGTTGTACTGCTTTTTA--------ACTGTGGTGCT
AGCTTTTGTGCTAGCTATTAAAAGAGTTCCATGTACTCCAATAGAGTTCCATATACTCCAATATAC--------------
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----------------------------------ATATATGATATATGGTGTC----TGATCATTGTGATGGGCGAAATG
TGGTCAATTTTTACCGTGAGTGGTTTATTTGTTTATTTTGTGCGGCTGGTTTATGGAATTGCGTATGCTAGGCATTTGGT
TCTTGAAAACTGATGAAAGAATGTGGTACCCGGCTCAACGAGACAGACGCCCCACCTTCCAGCCCAGAGATCAATGTCTG
AACACGATATAGCTTAATACAGAATAAACCACGATTCATTGAAGTACTATGGATACAAAGTATTAAGTTTACAATACTCT
TGTGAAGCAAGGCAGCACTACTCGTGTGGCGACACTCTATACCTTA-TTTTTTTCAAACAACCCGGCCTCAAAAACTAGT
ACAGGAAGCGGTATAACACAACGGAAAAGCATGACGATGGCGGGACTCCAATTGAAAGGGACACCATTGGGTCACATCCT
AGTTCGCACTCACGGAATCTTTAGCTACGACATCTTCATCATCTAGCATGAAAAGGCAGGTGAGTATTTTGAATATACTC
GCATGCTCACAAACAATCCAAAGAGCTAGCTATAACAT----------ATCAATCGAAAAGAAACAGGTGAAAGACATAA
ATTGTAAGTA-AATAGTTCTATCTGAAGTAAGTACCCATAGCCTGATCGTTTAGCATCACATGGACCCTCTCTCAGCAAA
ATCCCCGGCCATCCCATTTACTTCTCCTAGCCACCTCATGATCAACCCAACTTTCCCTGGGGTTTCTTCATTTCGACACT
TACTTAGTTTACTTTGTTCATGACCTTGATCATATAGTGTGACTTAATACGAATTGTGTCCCATTGTTGGGGACTCGGCT
ATTCGTATAGATT--
>chr4A_644
TTTTTTCCTTTTTTATTTTTG-----------------------------------------------------------
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----------------------GTGAACTTGGTGTACCCTGATTTTGGTTTTGGGTACGGCTTTTT---CAGACAGAAGA
GGGGAGACGGGGAAGAGAAGGTGTGGGTGTGGGCCATCGAACAACCAATCACACAGCCGCTAAGCCTGCTGGAG--CACG
GATGTGAGGCATGAGCAGGCAAGCCCTTTCAGCAAAATCGGTGCCGTCACTAACAAGTGGGGCCTCGTCCACCTCACACT
GGTCTTCGCGTGTCCTGCCATCGTCTCAGTTAGTCCTGCCTCTTACCCAAATCGCAAACCCTACCTCGCCAGCGCCACC-
ATCCAGATCCCAAGAGCTCCCCTCGTTCTCCGTCCCTCCGGCGCCAGCCATGCGAATCCGCAGGGCCGCCTCCCTCCTGC
TCGGCGTCGCCCCCTCCGCCTCCTCCTCCTCCCAGCCGCCTCGACCCAATCTGCCCCCGCTCCCGCCAGCCGACGCCGGC
GGCCCGCCGCCCTGCGTGACGAACATGGCGGTAGCGGACCTGATGGACCAACTCGGCATCCAAGATCCCGAGGTAATTTT
CTTGC-----CCCACTCGATGCATGCTCGTAGC--TTGCCGTATCC------TGCATCTTGGATGTATTGCCCATTTCCG
CGCCGCCGGCCGCCGGTCCCTGTACAGCAGCGTGC-GATCCCCC----TCCCTTGCTAGATCTCCTCTGCCGAGGTTGCC
CGTCTGGCCGCTGCTGCTCGCGCGCGGGTCTGGCTCGTCCGCCCGGACACGTCCCTGCTGGCTGCTAGGGTTTCCATCCC
TCCGCGCGCC-------------------------------------TCGCGTTTGCTTGCTTGTTTCTGCAGGC-----
-----------GCGGTAATCTGCGACCAGCCAGCCAGCGGCGGCGTGCCTGCAAGGGTTGGAAACGATGCGAGCCGTACC
TACGTGCATCCACTCCATTTCACTTACATGTACATGTGTCGGTCGAAAATGCATGTATTTTCTGATTTTTGC----TTTT
TTTCATACCATCCTCACAAAGGATCAGGTTCCACAATCTAACGATAATGAAACAAAACCAAGGTGCAGCAGCATGAGTAT
CCAAGTGCAACAAGAAAAGAGTTTAGCTGCCGCAAAATGCTAACATCAAAGAT-AAAAAACAACAGTAACAAAAGTTTTG
ACCTAACCACAGGGCACCTAAAGTTACAATTCAGATCAACCTCCACGAACACTTTGCCTGCTGTCATGTACTTCCTTCAC
TGCAG-CCCCCTATAACTCAGCATTATTTTTCATTATTGTATATCTCTTTTCTTGACCAGGGGCTCATTTTTTTGATTTT
TCACTTTTCATGTTTTTCAGGATGACAAGCAATTCAAGGAAACTTACTTCTGGGATGGCCTTCCTAGCCTTCCCAAACAC
CACCCCTGGGGATCTAGGTATCATTTCCCAGCCACCACTTGTGCCGATTCCATTGAGGAAAAAGAGGAGATGGCCGTTGA
CATGCTCGATGACATCATCTTGGAACCGCGTGTCGTGGAGAAGAACTCTGAGAAAAACAAGAGCACCACAACGAAGGGTG
AGGAAGAGAAGAACAAGAGCAAGCCAGAGACA------AAAGGGAAGGGGGAGGTGGAGGCAGATGAGAGTGATGCTGCC
AGAGGAGGATATATGGCCATGCAAGCAGAATGAAAG------GCGGTTCTACGGGCGGCCCACAAGCCAGCCCAACTCGT
ACTGCTTGCAACACTCTCACCGGAAGCCCCTTGCCATCTCGAAGCCACCTCATAGCAAGAGGATCACTGCCCACCGTGAC
TTGGGACTAGGGTTCTACTACTATGATGGGTTCAGCCCGTCAGGCAACACCAAGAGGCAACGCGGATGAAGCAGTTTGCC
AGAACCTATTGAACAGAAAGAGGAGGTGTCGCCTGAACACCACGTCGATTTTAGTGCAGGTCTGGTTGGAGTTGCTGACG
AAGAAAATCAATTCGTGTCGGAGTCAGAATACATTGACAAGGCTAGGTCCGACATCTACACTGATGTCATGATCGCTGGC
TACGACGATGATAGCAGCGATGAAGACTCGCCTGACTACAATGGCGAAAACATTAAGGTGAGCAAGAACCCGTTGAAGAA
GAGGGGTAAGAAGCCTTTGAAAGCCCGATCGCTCAAGTCATTGATGTGATAAGAGCACGGTCGCACTTGTGTCTCTGTG-
-----GCCTGTGGAAACAATATAGTACAAACTATATGGATATTGTGTTGTGCTGCTTTTTAACTGTGGTACTGTGGTGCT
AGCTTTTGTACTAGCTATTAAA--------------------AGAGTTCCATATACTCCAATATATATATATATATATAT
ATATATATATAGGCTTGCTAAACTATGCCTGCGCACATGCTGTTCTATCCTACGCTCCGGCCAGTACGCGTTAAGTAGCC
CGAGTTAACCAGGCCGAAGGGCGTGCACGCTGTGGGGAAAATTGGACGTAATGTCTTACGACCAAAACCACTAGTAGTAA
CAAGTTACCGGGCGCTAATTAGCAGAGCCATCCCTCGTACACCAAACTTTCACTTCATCGTAATTGCCATCGTAACATCG
TAAAATGCCTAGCCGAACTGTTAATTCCTACCATCAGTAACCAGGCATATATGATCTAGTAAAGATGTTACTATCAGTAT
TATGGCAATAGTAACTGGCCTTGATGAAGTCGTAACGGATCATCATGATTACATTTTGTACCCACGTCCCGCATGATTGT
AGCAATGCATTACTACATATATCAGCCTCGATCAAAGAATCTTTAACTTTTTTGTTCGTAATTCTTTTTTGCATTACCAT
CCACTCTTTTTTTATTGCTATCAGTTTTTGAGCATGTAGTAATGCGTTACTACATGTTTCAGGAAGGTTTTACTACGTTT
ACGGATGAAACCATAGACATCTCTCATCCCAGTAAAAAAAACCTAGATCCATTACCATCTATAGTTAATCTATTACTAGC
AATGAATAGTGACCCAAATTCAGGGCGTTGCGGAGCAACACATGGTAATGGAATTAAATGTGTTACTTTCTTTTTCACAT
GCCGTTACCCTCAACCATTCTTGCGGTGGAGACGCGACCCGAGCGCCTGGTTAGGAGTGGCCGGAGCGTAGGCTAAGCAA
CAATGCGCGCACGCTCACAATAGCGCAGCCGTGTATATATATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATATATGATATATGGTGTG----TGGTCATTGTGATGGGCGAGATG
CGGTCAATTTTTACTGTGAGTGGTTTATTTGTTTATTTTGTGTGGCTGGTTTATCGAATTGCGTATGCTAGGCATTTGAT
TCTTGAAAATTGATGAATGAATGTGGTACCCGGCTCAACGAGATGG----------------------------------
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>chr5D_670
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-----------------------------TGGCGTACCCTGATTCTGATTTTGGATACGGTTTTTT---CAGTCAAAACA
GGGGAGACGGGGAAGAGAAGGTGTGGGTGTGGGCCATCAAACAACCAAT--CACAGCCGCTGAGCCTGCTG--G--CACG
GATGTTAGCAAGCCCTGTCCGCCA-CTCTCAGCAAAAT------CGTCACTGACAAGTGGGCCCTCCTCCACCTCACACT
GGTCTTCGCCTGTCCTGCCTTCGTCTCAGTTAGTCCTGCCTCTTGCCCAAATCCCAAACCCTACCTCGCCAACGCTACCT
CTCCAGATCCCGAGAGCTCCCCTCGCTCTCCGTCCCTGCCGCGCCAGCCATGCGGATCCGCAGGGCCGCCTCCCTCCTGC
TCGGCGTCACCCCCTCCGCCTCCTCCTCCTCCCAGCCGCCCCGACCCAATCTGCCCCCGCTCCCATCAGCCGACGCCGGC
GGCCCGCCGCCCTGCGTGACGAACATGGCGGTAGCGGACCTGATGGACCAACTCGGCATCCAAGATCCCGAGGTAATTTT
CCTGCCCCCACCCCCACGGTGCATGCTCGTAGC--TTGCCGTATCC------TGCACCGATTGCA-------CATTTCCG
CGCCGCCGGCCGCCGGCCGCTGCACAGCAGCGTGTGGATCCGCC----TCCCTCGCTGGATCTCCTCTGCCGAGGTTGCC
CATCCGGCCGCTGCTGCTCGCCCGCGGGTCTGGCTCGTCCGCGCAGACACGTCCCAGCT-------AGGGTTTCCATCCC
TCCATGCCCAGCGCGCTTGCTTGTGTCTGGACGGAATCATGTCCATGTCATGTTTCCTTGCTTGTTTCTAGAGGCAGTCG
TCTTGTCCCTCCCGGTAATCTGTGGCCAGCC----GGCGGCGGCGTGTCTGCTAGGGTTGGAAGCGATGCGAGCAGTACC
TACGCGTATCCACCCTATTTCGCTTACATATACCAGTGT-GGTCG-AAATACATGTATTTTCCGATTTTTTTTTTGTTTT
TTTCATAACATCCTCGCAAAGGATCAGGTTCCACAATCAAATGATAATGAAACAAAAACAAGGTGTAGCAGCATGAGCAT
CCAGGTGTAACTGGAAAAGAGTTCAGCTCCAGCACAATCCTGACAGCAAAGAG---AAAACAACATTAACTAAAGTTTTA
ACCTAACCACAGGGCTCCTAAACCTACATTTCGGACCAACATCCACAAACCCTTTCCCTGCTCTCATGTACTTCCTTCAC
AGCAG-CTCCGCAGAACTAAACATCATTTTTCATTATTGCATATTTATTTTCTTAAACAGGGGCTCATTTTCTGAATTTT
C--ATTTTCATCTTTTTCAGGATGACAAGCACTTCAAGGAGACTTACTTCGGGGATGGCCTTCCTAGCCTTCCCAGACAC
CACCCCTGGGGATCTAGGTGCCCTTTCCCAGCCACCACCTGTGCCGACTCCACTGAGGAAAATGAGGAGATGGCCGTTGA
CATGCTCGATTACATCATCTTGGAACCAGGTATCGTGGAGAAGAACTCTGAGAAAAACAAGAGCACCACAACGAAGGGCG
AGGAAGAGAAAAACAAGACCAAGTTGAAGACAAAGGGGAAGGGGAAGGAGAAGGTGGAGGCAGATGAGAGTGATGATGCC
GGAGGAGGGT----GGCCGTGCAAGAAGAACGAGAGCGAAAGGTGGTTCTGCGGGCGGCCTGCGAGCCAGCCCAACTCGT
ACTGCTCGCACCACTCTGATCAAAAGCCTCGTACCATCTCGAAGCCACCTCAGAGGAAGAGGGTCATCGCCAACCAGGGC
TTGGACCTAGGGTTCTGCTACTACGGCGGGTTCGGCCTATCACGCAGCACCAAGAGGCACCACGGACCAAGCAGTGTGCA
AGAACCTGTTGAACATAAAGAGCATACACCACTAG---ATCACATTGATTTAAATGCAGGTCTAGCAGGAGCTGATGACA
TAGATCATCAAGTCGCGTAGGCGTCAGAATGCTTCGATGAGCCTAGACACAACAACTGCATCAACGTTATTATCGATGGT
TGCTATGTGGAAATCAGCGATGATGACGCACCTGACTACAATGGTGAAACCGTTAAGGTGAGCAAGACCCCATCAAAGAA
GATGGGGAAGAAGCCCGTGAAAGCCCGGTCGCTCAAGTCACTAATGTGATAAGAGCACGACCGTACTCGGGTCTCCGTG-
-----GC-------------------------------------------------------------------------
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>chr4A_674
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---------------------------------GTACCCTGATTCTGATTTTGGATACGGTTTTTT---CAGTCAGAACA
GAGGAGACGGGGAAGAGAAGGTGTGGGTGTGGGCCATCAAACAACCAAT--CACAGCCGCTAAGCCTGCTG--GAGCACG
GATGTGAGCAGGCCCTGTCCGCCA-CTCTCAGCAAAGTCGCTGCCGTCACGGACAAGTGGGGCCTCGTCCACCTCACACT
GGTCTTCGCGTGTCCTGCCTTCGTCTCAGTTAGTCCTGCCTCTTGCCCAAATCCCAAACCCTACCTCGCCAGCGCCACC-
ATCCAGATCCTGAGAGCTCCCCTCTTTCTCCGTCCCTCCGGCGCCAGCCATGCGGATCCGCAGGGCCGCCTCCCTCCTGC
TCGGCGTCGCCCCCTCCGCCTCCTCCTCCTCCCAGCCGCCCCGACGCAATCTGCCCCCGCTCCCGCCAGCCGACGCCGGC
GGCCCGCCGCCCTGCGTGACGAACATGGCGGTAGCGGACCTGATGGACCAACTCGGCGTCCAAGATCCCGTGGTAATTTT
CCTCCCCCCGCCCCCACGGTGCATGCTCGTAGC--TTGCCGTATCCTGCTCCTGCACCGATTGCA-------CATTTCCG
CGCCGCCGGCCGCCGGCCGCTGCACAGCAGCGTGTGGATCCGCC----TCCATCGCTGGATCTCCTCTGCCGAGGTTGCC
CATCGGGCCGCTGGTACTCGCGCGCGGGTCTGGCTCGTCCGCGCAGACACGTCCCAGCT-------AGGGTTTCCATCCC
TCCACGCTTCGCGCGCTTGCTTGTGTCTGGACGGAATCATGTCCATGTGATGTTTGCTTGCTTGTTTCTGGAGGCAGTCG
TGTTGTCCCTCGCGGTAATCTGTGGTCA------------------GTCTGCTAGGGTTGGAAGCGATGCGAGCAGTACC
TACGCGCTTACACCCTATTTCACTTACATGTACCTGTGTAGGTCG-AAATGCATGTATTTTCTGATTACTA-----TTTT
TTGCATACCATCCTCACAAAGGATCAGGTTCCAAAATCAAATGATAATGAAACTAAAACAAGGTGTAGCAGCATGAGCAT
CCAGGTGCAG--------GAGTTTATCTGCCGCACAATGCTAACAGCAAAGATT--AAAACAACATTAACAAAAGTTTTG
ACCTAACCACAGGGCACCTAAGCCTACATTTCAGACAAACATCCACAAACCCTTTGCCTGCTCTCATGTACTTCCTTCAC
AGCAG-TTCCGCAGAACTAAACATCACTTTTCATTATTGCATATTTATCTTCTTAAACAGGGGTTCATTTTCGGAATTTT
C--ATTTTCAACTTTTTCAGGATGACAAGCACTTCAAGGAGACTTACTTCTGGGATGGCCGTCCTAGCCTTCGCAGACAC
CACCCGTGGGGATCTAGGTGCCATTTCCCAGCCACCACCCGTGCCAACTCCATTGAGGAAAATGAGGAGATGGCCGTTGA
CATGCTCGATAGCGTCATCTTGGAACCATGTATCGTGGAGAAGAACTGTGAGAAAAGCAAGAGCACCACAACGAAGGGCG
AGGAAGAGAAGAACAAGACCAAGTTGAAGACAAAGGGGAAGGGGAAGGAGAAGGTGGAGGCAAATGAGAGTGACGATGCC
GGTGGAGGAT----GGCCGTGCAAGAAGAACGAGAGCGAAAGGTGGTTCTGCGGGAGGCCTGCGAGCCAGCCCAACTCGT
ACTGCTCGCACCACTCCGATCAAAAGCCTCGTGCCATCTCGAAGCCACCTCAGAGGAAGAGGATCGTCGCCAACCGGGGC
TTGGACTTAGGGTTCTGCTACTACGGCGGGTTTGGCCCATCAAGCAGCACCAAGAGGCACCATGGATCAAGCAGCGTGCA
AGAACCTGTTGAACAGAAAGAGCATACAACTCTAG---ATCACATTGATTTAAATGCAAGTCTAGCTGGAGCTGATGATA
TAGAACATCAAGGCGCGTCGGCGTCAGAATGCTTCGATGAGCCTAGGCACGACGACTGCACCGACGTCATTATCGATGGT
TGGTATGTGGAAATCAGCGATGATGACGCACCTGACTACAACAGTGAAACCGTTAAGGTGAGCAAGACCCCGTCAAAGAA
GATGGGGAAGAAGCCCGTGAAAGCCCGGTCGCTCAAGTCACTAATGTGATACGAGCACG---------------------
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>chr4A_3049
AGAT----------------------------------------------------------------------------
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--------------------------------------------GGACGCCCCACCTTCCAGCCCAGAGATCAATGTCTG
AACACGATATAGCTTAATATAGAATAAACCACGATTCATTGAAGTACTACGGATACAAAGTATTTATTTTACAATACTCT
TGTGAAGCAAGGCGGAACTACTCGTGCGGCGACACTGTATGCCTTATTTTTTTTCAAACAACCCGGCCTCAAAAACTAGT
ACATGAAGCGGTATAACACAATGGAAAAGCATGACGATGGTGGGACTCCAATTGAAAGGGACACCATTGGGTCACATCCT
AGTTTGCACTCATGGAAAACTTAGCTACGGCATCTTCAGCATCTAGCCTGAAAAGGCAGGTGAGTATTTTGAATATATTC
GCAAGCTCACAAACAATCCAAAAAGCAAGCAAGCAAA--CTAGAACATATTGATCAAAAAGAAACAGGTGAAAGACATAA
ATTGTAAGTA-AATAGTTCTAACTGAAGTAAATACTCATAGCCTGATGGTTTAGCATGACATGGACCCTCTCTCGGCATA
ATCCCTGGCCATCCCATTTACTTCTCCTAGCCACCTCATGGTCAACCCAACTTTCCCTGGGGTTTCTTCATTTCAACACT
TACTTAGTTTCCTTTGTTCATGACCTTGATCATATAGTGTGACTTAATACAAATTGTGTCCCATTGTCGGGGACTCTGCT
ATTTGTATATATT--
>SNPs
---S-S-S-SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-------------------------
---S-----S------S-SSSS---------------S--------------------------------S---------
----------------------------------------------------------------------------S---
------------------------------------------------S-------------------------------
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----------S-----------------------------------------------------------------S---
--------------------------S-----------------------------------------------------
---------------------------------------------S----------------------------------
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---------S------------------------------------------------------S-S-SS----------
-------------------------S------------------------------------------------------
-------------------------------------------------------------------S------------
---------------------------------------------------------------------S----------
----------------------S-----------------S---------------------------------------
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---------------------------------------------------------S----------------------
---------S----------------------------------------------------------------------
----SS--------------------------------------------------------------------------
-------------------------------------------------S------------------------------
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-S----S------------------S----------------------------------S-------S-----------
-----------S-----------------------------------------------------------S--------
---------------------------------------------S-----------------------S----------
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---------------S---S-----------------S----------S---------S---------------S-----
-------------S---S-----------------S------------------------------------S-------
------S---------S--------------------------------------------------------------S
SSSSS--------------------------------------S-----S----S-------------------------
---S----S-----------------------------------------------------------------------
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-----------------------------------------------SSSSS-SSSS-----------------------
-------------------S-----------------------S-S-S-------S---S-S--S---------------
--S-------S---------S--------SS-------S--------S-----------------S--------------
----S--------------------------------------S---------------S--------------------
----------------------------------------------------SS--------S-S-----S-------S-
----------------S-----S-----------S------S--------------------------------S-----
---S-------------------S------------S-------S------------------S--S-------S-----
--------S---------------------------SSS--------S---------------------S----------
----------S--S--------------S----------S--S-----S----S---SS---------------------
------------S-S---S------------------S----------------------S-------------------
-----------------------------------------------S---------------S-S-----------S--
-------------SS
>forward_76
--------------------------------------------------------GTCCTATGGGGCCTTAGCAC----
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>reverse_1166
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---------------------------------------------AACCAACTCGGCATCCAAGA---------------
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>forward_194
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--------------CGTCGCTAGATGGTCTACGG----------------------------------------------
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>reverse_2221
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------------------------------------------------------------AAGCACCATGACGAAGGGTG
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>forward_583
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---GAGATACGCACACGCCCTAT---------------------------------------------------------
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>reverse_2390
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---------------------------------------------------------------------ACCCAACTCGT
ACTGCTTGC-----------------------------------------------------------------------
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>forward_2366
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--------------------------GCAAGCAGAATGAAAGGCGA----------------------------------
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>reverse_4659
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------------------CACTTCTCCTAGCCACCTCG------------------------------------------
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---------------
