>input_sequence_44478
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-ATGGAAACACCAAACACTTGTTCTTTTTGTTCTCTGTTTGATAGCCTTATGACGGACAGAGGTGATGGACCAATTGGTA
GTCTCCCTGAACATCTCCTTGTAGAAATATTGACTCGGTTACCAACCCACGAGTGGGTTCAAATATCATGTGTCAGCAAG
CATTGGGCAAGCATGTTCCGAGGAGAATACTTGTGGCAAACCGCTATTGCAAGGAAATGGCCATCAGCTGGTTTCCGGAA
ACGCTGGCCTGGGCCAATTCCCAGAGGCTCTGCTAGGAGGTGAGCTTCCAAAGTCTGATATTGTCCTGTCTTCTCCATCA
TATGATCTTTTTGAAGAATAAAAAAGATTGCCAATTCCTACTATACCTGCAGTATGATTGGTTCCTTGTATCTTGTATCA
ATTTGGAAAATGTAAAAATAAAACAGAAGTCTCACTTATTACAGTGCATCCAGTATCAATTTAGTCTTATATTACTGCAT
CTTG----CGACATTGCTGTTGGATATACTCTAAACATTTCACTT-GAACTGAACTATGTCTGAAGAAGGGCAAATAATT
CGTTTCTAGTATACATACTCACTAGGTCATTATATCAAAGCCATGGAAGTGTAGCTCTCTTTTGTGCCATCCAGCATTTC
AAAATCCAATTAAAAATATGAAATGAATCATTTACAGAAGATTCCAAGCACTTTATGTCAGCGAGAACCTTGTACCATCT
GGTGGGGAGATTGACGAGCTTGTTGGTCACACATATCTCTATCTAAAAGAACAACTTGAGCGTGTTGCCGTTCCTCCATC
CAGCATACTTCATGGCACCATCATTGGTGAGTTATGTGTTTAAAATGTCAGTC--------------TTTTACTAGCTTC
AGTGCCAACATATTTTAGTGCTGGAGGTCATTAACATTTTCCAAAGATACTAGAACTAAATGTCGGGCTACTAAATCATG
TCATAGATGGGAGAATTGTGATGCTAATACGTGTCTGGCTTTATGAAGAACAAATATAGGATATTGTGCTGTTGAAAGGA
AACTTTATTTGGAAAGCTTGG----------------------AAAACTATGTAGTGCTCCTCTGTACGAGTAAAAGAAT
CATGTTTTCATATACTATAAGATTCATGTATTGCTTCACATTGAGGATTGCTGATACCTCCCATATACTAAAAGGTTGCT
CCTTCTCATCTTCTGTACAGATCAGTTCATTGCTTGTGGTAGGACAGGAGAAAAGGCCCATGAACTTGCTTCGAATATAT
GGATTGCAGTCATTGACAATTTGGAAGAAAACCAGCAGACATTCATGCTGTTAAAACACCTAGCGCAAGAAGGAGATGTG
AGAACTCTTCTGAATATGTTTGTTAATTCTCAGAGCAGA-----------------------------------------
--------------------AAAGAGAAAGTATATTTCCTCGAAAAAAAGTATACTTACTTTCATGTGCAAGTAGAACAT
CCATTTCTTTTAATGCAAGTAAATACCCCAAATTCCGGAAAAAAAAACTCAATAGATGAAATTATCTGGCTGCATTTTCA
TCAATGC-TGGATAAATATACATAATATATGTGATTA---------------------------CTTATATGAGTGTTTC
ATGTTCCATCTGCAGTTTTTCCTTCCATTTCCATATTCGAGGTCGTATAAAGTACTGTGGAGGGTGTTTGACAAGCTGTT
CACCGACTTCCGTGACTGTTTCAACGGGGCAGATTACCATGAGGCGCTAGCAGGTGCCAAGTCTAGGTTTCAGCCAGTAC
CTTCTTCATGGCTTGGACATTAG---------------------------------------------------------
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----------------------------------------
>chr5D_1_TraesCS5D01G282600
ACTCGGCGACATTTCTTTCCCCC----TCCGCCCGTTCCTCTCCGGGGTCCGGAGGCCCCCTGGAGCCGGGAGACCCCGA
GGAGCCACGCCCCTCTCCCGGCCTCC---CCGCTCCGGTGCGTGATACCGCGCTTCTTGCCGTATTTCGAGTTG------
---GGTTTCTTGTATTTCTGGCCGGCGTGCTGGCTCTGCTTCGGTTAGGGAAATAGGAACCTAGGAAAGATGCTCTCGAC
A-TT-TTGTGCTGGTCCGTACGTGGGTGGATCTTGGCACGGGTGCTGCTTCGATTGTAGGGTATCAGTTTCTGTGCAAGA
T----AAGCTGTTGGTGTTCTTGTTGGTTGGTCGGTCGGTCGGTCGTTTGC-----------------TTTCATCCACCA
AATTGATGCTCTCCAGTTCAACATGGGGACGGCTGATTCTTGATCGGCCTTCTTTTGCCCTATGACCAACTGACTGACCA
AGATGATCTTCTTGGCTAGCCCATGTAGATGCAGTCTTCTCCTGTTGGTGGGTGTATAATTC--AGTAGCACTCAAAGCA
ATTCTGAACCCTTTCGAGATTGATTGATGGTGCAAAAGATTATTTATTCTTTGGTGTGTCTGCTTTGTTCGTTAGTAGCG
GTAGTGCTTGTGCGGTACTTTGTCTGTCATATACAGAGGACAATTTTAGCAAAGGGGTTTCCCAACTAATTGCATATTCC
TCTGTCTGCCGCTGATCTGAACA--TTCTGTTTTCGTGTCAAATAGAATACACAGCTACTAACTTTGTTGCGCTCTGTAT
CTGTGGAGAATATTGTGTTTCTCTGATTCCATCTTCTTTAACAATTTGTATATTTAT-----------------------
-------ATGGTACATCGGAATTTAGCAGTGAGTCATTGTATTACTACTCATGAGAAGCACAACTTTGTTGCTGGTGTTT
GTTTATGCACGTTTTTGGGCACTTAATCATAATTCTCTCTGTTCTGGTCTTTAAAATCATTCTCTCGTTTCATAACCATA
TGTTTATCC------------------------------------------------GTATTTCCACTTGCTGGACTGAA
AATGGAAACACCAAACACTTGTTCTTTTTGTTCTCTGTTTGATAGCCTTATGACGGACAGAGGTGATGGACCAATTGGTA
GTCTCCCTGAACATCTCCTTGTAGAAATATTGACTCGGTTACCAACCCACGAGTGGGTTCAAATATCATGTGTCAGCAAG
CATTGGGCAAGCATGTTCCGAGGAGAATACTTGTGGCAAACCGCTATTGCAAGGAAATGGCCATCAGCTGGTTTCCGGAA
ACGCTGGCCTGGGCCAATTCCCAGAGGCTCTGCTAGGAGGTGAGCTTCCAAAGTCTGATATTGTCCTGTCTTCTCCATCA
TATGATCTTTTTGAAGAATAAAAAAGATTGCCAATTCCTACTATACCTGCAGTATGATTGGTTCCTTGTATCTTGTATCA
ATTTGGAAAATGTAAAAATAAAACAGAAGTCTCACTTATTACAGTGCATCCAGTATCAATTTAGTCTTATATTACTGCAT
CTTG----CGACATTGCTGTTGGATATACTCTAAACATTTCACTT-GAACTGAACTATGTCTGAAGAAGGGCAAATAATT
CGTTTCTAGTATACATACTCACTAGGTCATTATATCAAAGCCATGGAAGTGTAGCTCTCTTTTGTGCCATCCAGCATTTC
AAAATCCAATTAAAAATATGAAATGAATCATTTACAGAAGATTCCAAGCACTTTATGTCAGCGAGAACCTTGTACCATCT
GGTGGGGAGATTGACGAGCTTGTTGGTCACACATATCTCTATCTAAAAGAACAACTTGAGCGTGTTGCCGTTCCTCCATC
CAGCATACTTCATGGCACCATCATTGGTGAGTTATGTGTTTAAAATGTCAGTC--------------TTTTACTAGCTTC
AGTGCCAACATATTTTAGTGCTGGAGGTCATTAACATTTTCCAAAGATACTAGAACTAAATGTCGGGCTACTAAATCATG
TCATAGATGGGAGAATTGTGATGCTAATACGTGTCTGGCTTTATGAAGAACAAATATAGGATATTGTGCTGTTGAAAGGA
AACTTTATTTGGAAAGCTTGG----------------------AAAACTATGTAGTGCTCCTCTGTACGAGTAAAAGAAT
CATGTTTTCATATACTATAAGATTCATGTATTGCTTCACATTGAGGATTGCTGATACCTCCCATATACTAAAAGGTTGCT
CCTTCTCATCTTCTGTACAGATCAGTTCATTGCTTGTGGTAGGACAGGAGAAAAGGCCCATGAACTTGCTTCGAATATAT
GGATTGCAGTCATTGACAATTTGGAAGAAAACCAGCAGACATTCATGCTGTTAAAACACCTAGCGCAAGAAGGAGATGTG
AGAACTCTTCTGAATATGTTTGTTAATTCTCAGAGCAGA-----------------------------------------
--------------------AAAGAGAAAGTATATTTCCTCGAAAAAAAGTATACTTACTTTCATGTGCAAGTAGAACAT
CCATTTCTTTTAATGCAAGTAAATACCCCAAATTCCGGAAAAAAAAACTCAATAGATGAAATTATCTGGCTGCATTTTCA
TCAATGC-TGGATAAATATACATAATATATGTGATTA---------------------------CTTATATGAGTGTTTC
ATGTTCCATCTGCAGTTTTTCCTTCCATTTCCATATTCGAGGTCGTATAAAGTACTGTGGAGGGTGTTTGACAAGCTGTT
CACCGACTTCCGTGACTGTTTCAACGGGGCAGATTACCATGAGGCGCTAGCAGGTGCCAAGTCTAGGTTTCAGCCAGTAC
CTTCTTCATGGCTTGGACATTAGCACACAGCTGTTGTTCT--TTGTGAGTTGTACAATATCTTAGATGTAGCTGCTATAC
TTCCCCGAGTGAAAAGGTGGATGCCAAAGAATGGCAATTCCAATGGGATGACATT------TATGTTTGGTGACTTGGCC
GACAATTTCAAGAACGCCAAAATATATGTGATTGTTTGATTGCAAAAGGTGTATCTGTGTTCTTGAAAGTTCTTAAAGAA
ACATCGGTTGGATTCAGCATAATACACCCAGTAGGAACTAGTTTGGTGATTGGTTCAGGTTATAAA-AGCATCTACGGTC
AGGTGCCTCAAACCCCCCTCAAATGATAG---------------CACGAACCGGTAAAAAAAACCTGACTTAGACGGG--
CCCTCAAACGACCGGCCTGACCGGCACCCTCTCATATCCAGCACAAATCTGGGGTGGATATGGGGAGGTC-----CGGGA
GCGTCCACCACGTCAGACTGACGTGCGACTCCTCCAGGGAAACACTCCGAAACTCGGTGGCCCGAAGCTCGTCTCCTCCG
ATGGACCGATGGTGTCGCGTGTCAGCAC--------GCCGCGCAAGGCCTCTAGCTCGGCTATTTAAGGCAGGCGCTGGC
ACCAAAACCCTATACATCCACATTTCCTCCCCTTCCCTCTA---CCACCACTTTGCAATCGTCGTCCAACTCCACATTTC
ACTCGCCGACCGCTAGCCGGCAGCCACCGCAATCAAGTAGCCATGCCACCACACCGACGGGTCAGGAGCTACCCTTATGT
AACACTGGAGCGCCCGTTGTAGCTCCTTGAGCAGATCCGGGAAAGCCGCAAAGCCCGGATCACCGCGGTGCTACCTCCGG
ACGTGGTGGATCTGGAGGA---------------GGAGCAGGAGGAGGACGAGGTTGACGTGGAGGCCGCGGATCTGCAA
GCGGAGCAGTAGTCAACCCTTGATTCCCTCCAGTCAGAGGCGTAGGTGAAGGCCAACCGTCGTATCCTCCAAGCGGAGCA
GGAAGCGGACGTCGACGAGATGCTTGCCTATATGGAGGAG
>chr5B_1
ACTCGGCGACATTTCTTTCCCCCTCCGTCCGTCCGTTCCTCTCCGGGGTCCGGAGGCCCCCTGGAGCCGGGAGACCCCGA
GGAGCCACGCCCCCCTCCCGGCCTCC---CCGCTCCGGTGCGTGATACCGCGCTTCTTGCCGAATTTCGTTGCTTTCGAG
TTCGGTTTCTTGTATTTCTGGCCGGCGTGCTAGCTCTGCTTCGGTTAGGAAAATAGGAACCTAGGAGAGATGCTCTCAAC
A-TTTTTTTGCTGATCCGTGGGTGGGTGGATCTTGGCACGGGTGCTGCTTCGGTTT----GTATCAGTTTCTTGTGTGCG
AGATAAAGCTGTTGGCGTTCTTGTTAGTTGGCCGGTCGTTTCCTTTGCTCTGTTATGTACACTTCCATTTTCATCCACCA
AATTGATGCTATCCAGTTCATCTTGGGGACGGCTGGTTCTTGATCGGCCTTCTTTTGCCGTATGACCGACTGACTGACCA
AGATGATCTTCTTGGCTAGCCCATGTAGATGTAGTCTTCTCCTGTTGGTGGGTGTATAGTTC--AGTAGCACTCAAAGCA
ATTCTGAACCCTTTCGACATTGATTGATGGTGCAAAAGATTATTTATTCTTTGGTGTGTCTGCTTTGTTCGTTAGTAGCG
GTAGTGCTTGTGCGGTACTTTGTCTGTCATATACAGAGGACAATTTTAGCAAAGGGGTTTCCCAACTAATTGCATATTCC
TCTGTCTGCCGCTGATCTGAACA--TTCTGTTTTCGTGTCAAATAGAATACGCAGCTACTAACTTTGTTGCGCTCCGTAT
CTGTGGAGAATATTGTGTTTCTCTGATTCCATCTTCTTTAACAATTTGTATATTTAT-----------------------
-------ATGGTACATCGGAATTTAGCAGTGAGTCATTGTATTACTACTCATGAGAAGCACAACTTTGTTGCTGGTGTTT
GTTTATGCACGTTTTTGGGCACTTGATCATAATTCTCTCTGTTCTGGTCTTTAAAATCATTCTCTTGTTTCATAACTATA
TGTTTATCT------------------------------------------------GTATTTCCACTTGCTGGACTGAA
AATGGAAACACCAAACACTTGTTCTTTTTGTTCTCTGTTTGATAGCCTTATGACGGACAGAGGTGATGGACCAATTGGTA
GTCTCCCTGAACATCTCCTTGTAGAAATATTGGCTCGGTTACCAACCCACGAGTGGGTTCAAATATCATGTGTCAGCAAG
CATTGGGCAAGCATGTTCCGAGGAGAATACTTGTGGCAAACCGCTATTGCAAGGAAATGGCCATCAGCTGGTTTCCGGAA
ACGCTGGCCTGGGCCAATTCCCAGAGGCTCTGCTAGGAGGTGAGCTTCCAAAGTCTGATATTGCCCTGTCTTCTCCATCA
TATGATCTTTTTGAAGAATAAAAAAGATTGCCAATTCCTACTATACCTGCAGTATGATTGGTTCCTTGTATCTTGTATCA
ATTTGGAAAATGTAAAAATAAAACAGAACTCTCACTTATTACAGTGCATCCAGTATCAATTTAGTCTTATATTACTGCAT
CTTGTAAACGACATTGCTGTTGGATATACTCTAAACATTTCACTTTGAACTGAACTATGTCTTAAGAAGGGCAAATAATT
CGTTTCTAGTATACATACTCACTAGGTCATTATATCAAAGCCATGGAAGTGTAGCTCTCTTTTGTGCCATCCAGCATTTC
AAAATCCAATTAAAAATATGAAATGAACCATTTACAGAAGATTCCAAGCACTTTATGTCAGCGAAAACCTTGTACCATCT
GGTGGGGAGATTGACGAGCTTGTTGGTCACACATATCTCTATCTAAAAGAACAACTTGAGCGTGTTGCCGTTCCTCCATC
CAGCATACTTCATGGCACCATCATTGGTGAGTTATGTGTTTAAAATGTCAGTCCAAGCATAAAGGTTTTTTACTAGCTTC
AGTGCCAACATATTTTAGTGCTGGAGGTCATTAACATTTTCCGAAGATACTAGAACTAAATGTCGGGCTACTAAATCATG
TCATATATGGGAGAATTGTGATGCTAATACGTGTTTGGCTTTATGAAGAACAAATGTAGGATATTGTACTGTTGAAAGGA
AACTTTATTTGGAATTCTTGGCTGCATCCAGTTGAAAGCTTGGAAAACTATGTAGTGCTCCTCTGTACGAGTAAAAGAAT
CATGT------------TAAGATTCATGTATTGCTTCACACTGAGGATTGCTGATACCTCCCATATGCTAAAAGGTTGCT
CCTTCTCATCTTCTGTACAGATCAGTTCATTGCTTGTGGTAGGACAGGAGAGAAGGCCCATGAACTTGCTTCGAATATAT
GGATTGCAGTCATTGACAATTTGGAAGAAAACCAGCAGACGTTCATGCTGTTAAAACACCTAGCGCAAGAAGGAGATGTG
AGAACTCTTCTGAATATGTTTGTTAATTCTCAGAGCAGA-----------------------------------------
--------------------AAAGAGAAAGTATATTTCCTTGAAAAAAAGTATACTTACTTTCATGTGCAAGTAGAACAT
CCATTTCTTTTAATGCAAGTAAATACCGCAAATTCCGGAAA-AAAAACTCGATAGATGAAATTATCTGGCTGCATTTTCA
TCAATGC-TGGATAAATATACATAATATATGTGATTA---------------------------CTTATATGAGTGTTTC
ATGTTCCATCTGCAGTTTTTCCTTCCATTTCCATATTCGAGGTCGTATAAAGTACTGTGGAGGGTGTTTGACAAGCTGTT
CACCGACTTCCGTGACTGTTTCAACGGGGCAGATTACCATGAGGCGCTAGCAGGTGCCAAGTCTAGGTTTCAGCCAGTAC
CTTCTTCATGGCTTGGACATTAGCACACAGCTGTTGTTCTTATTGTGAGTTGTACACCGTCTTAGATGTAGCTGCTATAC
T-CCCCGAGCGAAAAGGTGGATGTCAAAGAGTGGTAATTCCAATGGGGATGTCATGTACTATATGTTTAGTGACTTGACC
AACAATTTCAAGAACGCAAAA-TATCTGTGACTGCTTTATTGCAAAACGTGTATATATGTTGCAAGTTCTTA--AAAGAA
AAGTCGGTTGGATTCAGTATAATACAACCAGCTGGAGCTAGTTTGGTTATTGGTTCAGGGTATAA---------------
--------------------------------------------------------------------------------
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>chr5A_1
ACTCGGCGACATTTC----CCCC----TCCGCCCGTTCCTCTCCGGGGTCCGGAGGTCCCCTGGAGCCGGGAGACCCCGA
GGAGCCACGCCCCCCTCCCGGCCTCCTCCCCGCTCCGGTGCGTGATACCGCGCTTCCTGCCGAATCTCGGGC--------
-TCGGTTTCTTGTATTTCTGGCCGGCGTGCTAGCTCTGCTTCGGTTAGGAAAATAGGAACCTAGGAAAGATGCTCTCGAC
ATTTTTTTTTCTGATCCGTGTGTGGGTGAATCTTGGCACGGTTGCCGCTTCGGTTGTAGAGTATCAGTTTCTGTGCAAGA
T----AAGCTGTTGGTGTTCTTGTTGGTTGGTCGGTCGG----TCGTTTGC-----------------TTTCATCCACCA
AATTAATGCTCTCCAGTTCATCATGGGGACGGCTGATTCTTGATCGGCCTTCTTTTGCCGTATGACCGACTGACTGACCA
AGATGATCTTCTTGGCTAGCCCATGTAG------TCTTCTCCTGTTGGTGAGTGTATATAACCTAGTAGCACTCAGA-CA
ATTCTGAACCCTTTCGAGATTGATTGATGGTGCAAAAGATTATTTATTCTTTGGTGTGTCTGCTTTGTTCGTTAGTACTG
GTAGTGCTTGTGCACTACTTTGTCTCTCATATACAGATGACAATTTTAGCGAAGGGGTTTCACAACTAATTGCATATTCC
TCTGTCTGCCGTTGATCTGAAACATTTCTGTTTTCGTGTCAAATAGAATACACAGCTACTAACTTTGTTGCGCTCTGTAT
CTGTGGAGAATATTGTGTTTCTCAGATTCCATAGTCTTTAACAATTTATATATTTATGGTACATTGGAATTTATTTTTTT
GCGGGTGATGGTACATTGGAATTTAGCAGTGAGTTATTGTATTACTACTCATGAGAAGCACAATTTTGTTGCTGGTGTTT
GTTTATGCACGTTTTGGGGCACTTTATCACAATTCTCTCTGTTCTGGTCTTTAAAATCATTCTCTTGTTCCAAAACTATG
TGGTTATTACTCCCATTGAAATAAAACCACAACAATTATTATGGATCGGAGGGATTAGTATTTCTTGTTGCTGGACTGAC
AATGGAAACAG-AAACACTTAGTCTTTTGGTTTTCTGTTTGATAGCCTTATGATGGACAGAGGTGATGGACCAATTGGTA
GTCTCCCTGAACATCTCCTTGTAGAAATATTGACTCGGTTACCAACCCACGAGTGGGTCCAAATATCATGTGTCAGCAAG
CACTGGGCAAGCATGTTCCGAGGAGAATACTTGTGGCAAACCGCTATTGCAAGGAAATGGCCATCCGCTGGTTTCCGGAA
ACGCTGGCCTGGGCCAATTCCCAGAGGCTCTGCTAGGAGGTGAGCTTCCAAAGTCTGATATTGTCCTGTCTTCTCCATCA
TATGATGTTTTTGAAGAATAAAAAAGATTGTCACTTCCTACTATACCTGCAGTATGATTGATTGCTTGTATCTTGTATCA
GTTTGGAAAATGTAAAAATAAAATAGAAGTCTCACTTACTACAGTGCATCCAGTATCAATTTAGTCTTATATTACTGCAT
CTTGTAAACAACATTGTTGTTGGATATACTCTAAACATTTCACTTTGAACTGAACTATGTCTGAAGAAGGGCAAATAATT
TGTTTCTCGTATACATACTCACTAGGTCATTATATCAAAGCCATGGAAGTGTAGCTCTCTTTTGTGCCATCCAGCATTTC
AAAATCCAATTAAAAATATGAAATGAATCATTTACAGAAGATTCCAAGCACTTTATGTCAGCGAGAACCTTGTACCATCT
GGTGGGGAGATTGACGAGCTTGTTGGTCACACATATCTCTATTTAAAAGAACAGCTTGAGCGTGTTGCCATTCCTCCATC
CAGCATACTTCATGGCACCATCATTGGTGAGTTGTGTGTTTAAAATGTCAGTCCAAGCATAAAGTTTTTTTACTAGCTTC
AGTGCCAACATATTTTAGTTCTGGAGGTCATTAACATTTTCCGAAGATACTAGAACTAAATGTCGGGCAACTAAATCATG
TCATATATGGGAGAATTGGGATGGTAATACCTGTATGGCTTTATGAAGAACAAATATTGGATACTATACTGTTGAAAGGA
AACTTTACTTGGAATTCTCGGCTGCATCAAGTTGAAAGCTTGGAAAACTATGTAGCGTTCCTCTGTACGAGTAAAAGAAT
CATGTTTTCATATACTATAAGATTCATGTATTGCTTCACACTGAGGATTGCTGATACCTCCCATATACTAAAAGATTGCT
CCTTCTCATCTTCTGTACAGATCAGTTCATTGCTTGTGGTAGGACAGGAGAAAAGGCCCATGAACTTGCTTCAAATATAT
GGATTGCAGTCATTGACAATTTGGAAGAAAACCAGCAGACATTCATGCTCTTAAAACACCTAGCGCAAGAAGGAGATGTA
AGAACTCTTCTGAATATGTTTGTTAATTCTCAGAGCAGCAAATAGAAAGTATATTTCCTCGAAAAAAAGTATACTTATGT
TTGTTAATTCTCAGAGCAGCAAATAGAAAGTATATTTCCTCGAAAAAAAGTATACTTACTTTCATGTGCCAGTAGAACAT
CCATTTCTTTGAATGCAAGTAAATACCCCAAATTCCGGAAA-AAAAAACTC----ATGAAATTATCTGGCTGCATTTTCA
TCAATGCCTGGGTAAATATACATAACTTCCGATTGAATCTTGGGTATGCAGAGTACAGTACTTGCTGATATGAGTGTTTC
ATGTTCCATTTGCAGTTTTTCCTTCCATTTCCATATTCGAGGTCGTATAAAGTACTGTGGAGGGTGTTTGACAAGCTGTT
CACCGACTTCCGTGACTGTTTCAGCGGGGGAGATTACCATGAGGCGCTAGCGGGTGCCAAGTCTAGGTTTCAGCCAGTAC
CTTCTTCATGGCTTGGACATTAGCACACAGCTGTTGTTCTTATTGTGAGTTGTACAATATCTTAGATGTAGCTGCTATAC
TTCCCCGAGTGAAAAAGTGGATGCCAAAGAATGGCAATTCCACTGGGATGACATT----TATATGTTTGGTGACTTGACC
GACAATTTCAAGAACGCCAAAATATATGCGATTGTTTGATTGCAAAAAGTGTATCTGCGTTCTTGAAAGTTCTTTGAGAA
ACATCGGTTGGATTCAGCATAATATACCCAGTAGGAGCTAGTTTGGTGATTGGTTCAGGGTATTAAGAGCATCTATGGCA
GGGCGCCTCAAACCCCCCTCAAACGATCGGGCGGACGTCCTGGTCACGGACCGGTAAAAAAAAGCGGCCCAGAA--GGGT
GCCTCAAACACCCGGCTTGACCGGTACCCTCTCGCATTCAGCTTAAATCTGGGGTGGATATGGGGAGGTTTGGTTCAGGC
GCGGGCGCCACGTCGGATTGATGTGCGGCTCTCCTGGGAAAACACTCTGAAACTCGGCGGTACAAAACTTATCTCCTTCG
ATGGACCGATGACGTCGCGTGTCGGGGC--------GCCGCGCAAGGCCCCTAGCTCGGCTACTTTAGGCGGACGCTGGC
ACCAAAACCCTATACATCCACATTTCCTCCTCTCCCCTCCATCGCCACCACTTTTAAATTGCCGTCCAACTCAACATTTC
ACTTGCCGGTTGCTAGCAGTCTGCCACCACAATCAAGTAGCCATGCCACCATGCCGACGGGTCAGAAGCTACCCTTATGT
AACATCGGAGTGCCCGCTGCAGCTCCTTGAGCAGACCCGGGAAAGCTACAAAGCCCACGTCACCGCGGTGCTACCTCCGG
ACGTGGTGGATCCTGAGGAGGACGAGGAGGACATGGAGCAGGAGGAGGACGAGGTGGATGCGAGGGCCGCGGATCTGTAG
GCGAAGCAGCAGTCAACCCTTGATTCCCTCCAGTCTAAGGCGGAGGCGAAGGCCAACCGTCGTATC--------------
----------------------------------------
>chr1A_3061
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-------------------------------------------------------AAAAAAATACGACTCAGAT--GG--
GCATCAAATGCCTGGCCTGGCCGGCAGCC-CTCGTATCCAGCCCAAATCTAAGACGGAT-TGGGGAGGCC-----CGGAC
GCGTCCGCCACATCGGACTGACGGCCGGATCCCATAGGAAAACAGTCTGAAACCCGGCGGTCCGAAGCTCAACTCCTCCA
ACGGACCGATGGCGCCGCGTGTCGGCGCTCCGGCGTGCCGTGCAAGTCCCCTAGCCCCGTTATTTAAGTCGGACATTGGC
ACCAAAACCATATACATCCACATTTCCTCCCCTCCCGTCCGTCCACGCCACTTTCCAATCACCGTCAC-CTTCACATTTC
ACTCGCCCGCCCTGC-------GCCACCGCAATCAAGTAGCCATGCCACCACCCCGGCAGGTCAGGAGCTACCTTTATCT
AGCGTTGGATCGCCGGCTGCAG------------ATCCGTGCCAGACGCGAAGTCCGGATCGCCGCGGGGCTACCTCCGG
ACGCGGTGGATC----------------------GGAGGAGGAGGAGTACGAGGA-------------------------
--------------------------------------------------------------------------------
----------------------------------------
>SNPs
--------------------------------------------------------------------------------
-------------S------------------------------------------------S------S-SSS------
-------------------------------S-----------------S------------------------------
-------S-----S-----SS-------------------------------S------S--------------------
----------------------------------------SSS-------------------------------------
--------------------S--------------------------------------S-------S------------
-------------------------------S--------------------------S---------------------
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------------------------S----------------------------------------S----------S---
--------S-----------------------------------------------------------------------
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------------------------------------------S-------------------------------------
-----S----------------------------S--------------------------------S------------
--------------SS----------------------------------------------------------------
----------------------------------------S---------------------------------------
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-----------------------------------------S--------S-----------------------------
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-----------------------------------------------------------------------------S--
-----------------------------------------------S--------------------------------
------------------------------------S----------------------S---------------S--SS
S--S-------------------S---S--------------------S--------------S-S-S-SSSS-SS----
S---------S----------------------S--------S------------------------------------S
------S-------S------------S----S-S---S--------S---------S--S---------S---------
------------S----------S--S----------------------S--------------------S-S-------
---------------------------------S-----S--------------S------S------------------
--------S--------S-S-S------------------------------S---------------------------
----S-----------S--S------------------------------------------------------------
------------SS-----------------------------------------S--S-S-SS-------------S-S
---S-----S-------------------------SS-----S---S-------------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_512
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------------TGGCTAGCCCATGTAGATGC------------------------------------------------
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>reverse_2281
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----------------------------------------TTGAGGATTGCTGATACCTCCC------------------
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>forward_985
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-----TGCACGTTTTTGGGCACTTA-------------------------------------------------------
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>reverse_3118
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-----------------------------------------------------------------------------GCC
GACAATTTCAAGAACGC---------------------------------------------------------------
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