>input_sequence_44474
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--------------------------------------------------ATGGCCGACAAGGAGAACGCGGCCCCCGCC
GCGGCGGCGGGCCCCCGGCTCACCCGTGCCGCGGCCAAGCGCGCCGCCACCTGCTCCGCGGGCCCCTCCGGCGGCGCCAA
GCGGAAGCGGGTGGCGCTCAGCGAGCTCCCCATCGTCTCCAACGCGGGGGTCGTCCTCCGCCAGCCCTCGAAGCCCGCCA
AGCCCGCGGCTGCGGCCGAGGGGGAGGAGCAGCACGGGGGCTTGAGCAGGTGCGCGTCCACCTCGCCGACCCCCGTCGGG
GAGGAGGTCA---GCGGCGGCGGCGGC---ATAACCCAGCTCAGCGGGTCCTACGCCTCCGACATCTACACCTACCTCCG
CACTATGGAGGTACGGCGCCCCCGATTCCTGATCTCCATTTCTGGCCGTCGGATGCCTCGATCCGTTGGCGCTGGGGTTG
GGTGGGATCGACTGGTCTGATGTCTAATCATTGGTTTGTCCAAATGGGGTGTGCAGGTGGAGGCGCCTCGCCGGCCGGCG
GCAGACTACATCGAGGCGGTCCAGACGGACGTGACGGCCAACATGCGGGCTATCCTAATCGACTGGCTCGTCGAGGTCGC
CGAGGAGTACAAGCTCGTTGCCGACACGCTTTACCTCACCGTCTCCTATGTCGACCGCTTCCTCTCTGCCAACCCGCTCG
GGCGCAATAGGCTGCAGCTCCTTGGCGTCGCCGCAATGCTCATTGCTTCGTAAGCGCAACCTCCCGTTCCGATGCCTTGA
AGGCTTCGAAAAGATTTTGAGGATTGAGTTGGGTTGGCTTTGGGGTGCTCGCAGGAAGTACGAGGAGATCAGTCCCCCGC
ATGTGGAGGACTTCTGCTACATCACGGACAATACCTACACCAGGCAGGAGCTTCTCACCATGGAGAGCGACATACTCAAG
CTCCTCAACTTCGAGATAGGCAGTCCGACCATCAAGACCTTCCTCAGGTGTCATACTGTCACTGACCCAATATTTGATAA
TCTCTGCCTATTTTGATTCCGTGTCTAACTGAATCTTTGTGCATTTCC-------CTC-------ACTAATTTCAGGCGG
TTCACAAGATCTGGCCCAGAAGACAAGAAGGTGACTACTACCAATCCTTTAAATTCTCCATATTGGATCCATTTGATTTA
ATTCTTCTTCAACTGCTTATGTGTGTCGGTGCCTGAAGTTATTCTTGCATGCTTGTCACA-GCGCTCCAGCTTATTAC--
-------TGGAGTTCATGGGTAGCTATCTTGCTGAGCTGAGTCTTCTGGACTACAGCTGTCTCCGGTTCTTGCCATCAGT
GGTTGCTGCTTCATCA-CTTTTTCTTGCTAGTCTGACCATTGGACCAGACACTAATCCTT-GGGTAAGAGTGGAGAAGTA
GAATGTGAAAGCTTGAAA-TGTTG-CTTTTGATATTTGAAGTTCTCAAAGCTAAAGCTGTCCTGTGATTATGTTGTTGCA
GGGCAAGGAAATGCATAAACTGACAGGCTACAAGGCATCAGAGCTGAAGGATTGCATTATAGCCATACATGATTTGCAGC
TCAATAGAAAGGGTCCATCATTACCAGCAATTCGAGACAA--GTATAAGCAACACAGGGTATGCTCAACTCCAACAGTTA
TTTAATATTCCTTTGGCGTTGTTATGCTTGTATTGTTTGGTCTAATTCTCTAATCATTTGGAACAGTTCAAATGTGTATC
GATGTTGCTTCCTCCTGTCGAGATCCCTGCATCGTACTTCCAAGACTTAACAGAATAG----------------------
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>chr5A_1_TraesCS5A01G072000
CACATGTTGTTGCACTGCTCAACGGCTTCCGAAGCCCGGTCAACTGTGGATTCCTTAGGCATTAATCCTGCTGATTGCAT
CTCCATCCATGACCTACAGTCTCAGCAGCACTCATGCAAGCTCCGAAAAACTGTGATCCTGGCAATTCTCTGGAATATTT
GGAAAAGAAGGAATGCAAAGATTTTCAAGCAAGAAGTGGAATCTTTGGGAACAGTGCTCCGCCGTGCGGCCCAAGACATT
TTTCTTTGGTCCAGTAGATGTGTAAACGAGGACCAGAAACAAATCCTGATTGACCGGGGGATCATGCTGTCCCGGCTAGA
TGTAGCATAGTTTTTTCTTCTTCTTCCTCTATCACTCTGACATTCTTGTAAATACTCTCTGTTAAACCAAAGTTAATAAA
ATGAGTTCAGGCTGGCTTTGCCCGCCGTAGTTCCCTAAAAAATGCTAGCATAATGTAACCCTGTCATTTTGCAGAATAAA
AAATTCACGGTCTCTCGCAAAAAGAAAAAGAACAGTACTATTTTAACAACGATGACACC------GAAATACAATTTCGT
GGCC-AAAAAATGTTGGGCCAAGAAAAAAAGAAAGAAAA-CCCGACCTGGAGGAGTGTGCTGTTTCGCGCTGGAACGCGG
GAGGCCCAGTACGATTTGGGAGGGGGGGCTGGCTGGCGGGCAGGCAGGCGCCGCGGGATTTCCGTATTATTTTAAAACTT
TTACCGCCCACCTCTCTCGCCAGCACGTGCGCCCCACTCCATCCAAAATTCCCCAATCCTATAGCAAGCGAAAATCCTAT
AGAGCTCAGCAAGCGAAACCCAGCGCAGCGCAGCGCGGGCTTCTTCTCCCTCC-TCCTCTTCGAATTCGCGTGTTTTGGC
GGCCATCTTCCCTCCCATTCCTCCAATCCCCTCTACATAACGCAACCGCCGCCGCCTCCCATCTTCCCTCGCCGCGCACC
GAATCTCAAACCCTAT-CTTGCCGCCCCGGGGAGCACGAGCCCGCCGACCATGGCCGACAAGGAGAACGCGGCCCCCGCC
GCGGCGGCGGGCCCCCGGCTCACCCGTGCCGCGGCCAAGCGCGCCGCCACCTGCTCCGCGGGCCCCTCCGGCGGCGCCAA
GCGGAAGCGGGTGGCGCTCAGCGAGCTCCCCATCGTCTCCAACGCGGGGGTCGTCCTCCGCCAGCCCTCGAAGCCCGCCA
AGCCCGCGGCTGCGGCCGAGGGGGAGGAGCAGCACGGGGGCTTGAGCAGGTGCGCGTCCACCTCGCCGACCCCCGTCGGG
GAGGAGGTCA---GCGGCGGCGGCGGC---ATAACCCAGCTCAGCGGGTCCTACGCCTCCGACATCTACACCTACCTCCG
CACTATGGAGGTACGGCGCCCCCGATTCCTGATCTCCATTTCTGGCCGTCGGATGCCTCGATCCGTTGGCGCTGGGGTTG
GGTGGGATCGACTGGTCTGATGTCTAATCATTGGTTTGTCCAAATGGGGTGTGCAGGTGGAGGCGCCTCGCCGGCCGGCG
GCAGACTACATCGAGGCGGTCCAGACGGACGTGACGGCCAACATGCGGGCTATCCTAATCGACTGGCTCGTCGAGGTCGC
CGAGGAGTACAAGCTCGTTGCCGACACGCTTTACCTCACCGTCTCCTATGTCGACCGCTTCCTCTCTGCCAACCCGCTCG
GGCGCAATAGGCTGCAGCTCCTTGGCGTCGCCGCAATGCTCATTGCTTCGTAAGCGCAACCTCCCGTTCCGATGCCTTGA
AGGCTTCGAAAAGATTTTGAGGATTGAGTTGGGTTGGCTTTGGGGTGCTCGCAGGAAGTACGAGGAGATCAGTCCCCCGC
ATGTGGAGGACTTCTGCTACATCACGGACAATACCTACACCAGGCAGGAGCTTCTCACCATGGAGAGCGACATACTCAAG
CTCCTCAACTTCGAGATAGGCAGTCCGACCATCAAGACCTTCCTCAGGTGTCATACTGTCACTGACCCAATATTTGATAA
TCTCTGCCTATTTTGATTCCGTGTCTAACTGAATCTTTGTGCATTTCC-------CTC-------ACTAATTTCAGGCGG
TTCACAAGATCTGGCCCAGAAGACAAGAAGGTGACTACTACCAATCCTTTAAATTCTCCATATTGGATCCATTTGATTTA
ATTCTTCTTCAACTGCTTATGTGTGTCGGTGCCTGAAGTTATTCTTGCATGCTTGTCACA-GCGCTCCAGCTTATTAC--
-------TGGAGTTCATGGGTAGCTATCTTGCTGAGCTGAGTCTTCTGGACTACAGCTGTCTCCGGTTCTTGCCATCAGT
GGTTGCTGCTTCATCA-CTTTTTCTTGCTAGTCTGACCATTGGACCAGACACTAATCCTT-GGGTAAGAGTGGAGAAGTA
GAATGTGAAAGCTTGAAA-TGTTG-CTTTTGATATTTGAAGTTCTCAAAGCTAAAGCTGTCCTGTGATTATGTTGTTGCA
GGGCAAGGAAATGCATAAACTGACAGGCTACAAGGCATCAGAGCTGAAGGATTGCATTATAGCCATACATGATTTGCAGC
TCAATAGAAAGGGTCCATCATTACCAGCAATTCGAGACAA--GTATAAGCAACACAGGGTATGCTCAACTCCAACAGTTA
TTTAATATTCCTTTGGCGTTGTTATGCTTGTATTGTTTGGTCTAATTCTCTAATCATTTGGAACAGTTCAAATGTGTATC
GATGTTGCTTCCTCCTGTCGAGATCCCTGCATCGTACTTCCAAGACTTAACAGAATAGCTGTTCCTGGGCCGCTCCACTG
TAAAGCTAATAACTCCGAGCTCATCTTGAGCTCCTTGGGATAAGGGAGAATTACAGTTTCAGAGCAGGTTCTTAGACAAG
TTAGAATGCTGGAAGCTGTTTAGATGCTTGAGGTTTAAAAGCCTAACCAGGAGCTTTTC-AATTCATTTAGGAGCTAGGT
TTATCACAAGTAGGAGGCCAGGCATTCTCTTCTTTTGTAGAATTGTACTTCTGTATTA-TATGTTAGAACAATGTGCCTT
G---GTCTGTTTGGCCACATATCTGTAATGTTTGATATATGTTCATCCATTGTCTTTGCTGATTTTTCTTCTTCTTTTGA
TCTGTTACCTGTGAGTGTGCTTGCAATACCTATGACCTACCTTTCTACCA------------------------------
---------------------------------AGGGGTTTTATTAGAAATAGGCCTAAATAACATAGCTTGCATGAATA
ATCATACTTGACAAGATGCTTATTTTTCACTATCTAACTATCACCTTGATAGCTTGTTAGTGCAACATTCTTTATTGAAT
CAAAATCCAAGAGGCCTCAGTCATTTCCAATGAATGATCAACCCATTTGCTGCCTATAAGGTGTTCACTTCTGAATGACT
GGTTATAAATTTGATGGCACGTTAAACATCATTTACTGAGGTTCAAAACACATTTACTGAGCGATATGTAGACCAGATGA
TGGCAGATGGATGGTTCTTGGTTTTCTTCAGTCTACTGTGCAAAGTTATGCTTATTGTAGTTTTCAATTGATTACTGAAG
TAGTGCTGTATAAGACACTGTCATGCTGAACATGCTTTCCATTTACCATCTGGATCTGGA------GTTTTGGACTACCA
ATAGCCAGTGGAGTACTTGTGAGGCACCTTAATTCTTTTGTGTGTGTGTGTGTGTGTGGGGGGGGGGTGCTTAATTCTTT
TCTGATGG------------------------------------------------------------------------
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----------------------CAACTGATGTAGCCGAAACCTCCTAAATGGTTACATATT-------TATTCTTGCTAA
TGAATGTGCAAGTAAACTCCGCCTATGTTGTCT-----------------------------------------------
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>chr5B_460
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-----------------------------------------------------------CCTGTCATTTTGCGGAATAAA
AAACTCACGGTCTCTCGCAAAAAGAAAAAGAACAGTATTAT--------------------------AATACAATTTCGT
GGCCAAAAAAATGTTGGGCCAAGAAAAAA-----GAAAA-CCCGATCT---GGAGTGTGCTGTTTCGCGCTGGAACGCGG
AAGGCCCAGTACGATTTCGGA-GGGGA----GCTGGCGGGCAGGCAGGCGCCGCGGGATTTCCGTATTATTTTAAAACTT
TTACCGCCCACCCCTC--GCCAGCACGTGCGCCCCACTCCATCCAAAATTCCCCAATCC--TAGCAAGCGAAACCAGACC
AGAGCT-AGCAGGCGAAACCCAGCGCAGCGCAGCGCGGGCTTCTTCTCCCTCC-TCCTCTTCGAATTCGTGTGTTTTGGC
GGCCATCTTCCCTCCCATTCCTCCAATTCTCTCTACATAACGCAACCGCCGCCGCCTCCCATCTTCCCTCGCCGCGCACC
GAATCCCAAACCCTAT-CCCGCCGCCCCGGTGAGCACGAGCCTGCCGACCATGGCCGACAAGGAGAACGCGGCCCCCGCC
GCGGCGGCGGGCCCCCGGCTCACCCGTGCCGCGGCCAAGCGCGCCGCCACCTGCTCCGCGGGCCCCTCCGGCGGCGCCAA
GCGGAAGCGGGTGGCGCTCAGCGAGCTCCCCATCGTCTCCAACGCGGGGATCGTCCTCCGCCAGCCGTCGAAGCCAGCCA
AGCCCGCGGCTGCGGCCGAGGGGGAGGAGGAGCACGGGGACGTGAGCAGGTGCGCGTCCACCTCGCCGACCCTCGCCAGG
GAGGAGGTCAGCGGCGGCGGCGGCGGC---GAAACCCAGCTCAGCGGGTCCTACGCCTCCGACATCTACACCTACCTCCG
CACTATGGAGGTACGGCAGTCCCGATTCCTGATCTCCATTTCTGGCCGTCGGATGCCTCGATCCGTCGGCGCTGGGTTTG
GGTGGGAACCACTTGTCTGATGTCTAATCATTGGTTCGTCCGAATGGCGGATGCAGGTGGAGGCGCCGCGCCGGCCAGCG
GCTGACTATATCGAGGCGGTGCAGACGGACGTGACGGCGAACATGCGGGCTATCCTAATCGACTGGCTCGTCGAGGTCGC
CGAGGAGTACAAGCTCGTTGCCGACACGCTTTACCTCACCGTCTCCTATGTCGACCGCTTCCTCTCTGCCAACCCTCTCG
GGCGCAACAAGCTGCAGCTCCTTGGCGTCGCCGCAATGCTCATTGCTTCGTAAGCGCAGCCTCCTGCTCCAATGCGTTGA
AGGGTTGGAAAAGATTTTGA-GATTGAGTTGGGTTGGCTTTGGGGTGGTTGCAGGAAGTACGAGGAGATCAGTCCCCCGC
ATGTGGAGGACTTCTGCTACATCACGGACAACACCTACACCAGGCAGGAGCTTCTCACCATGGAGAGCGACATACTCAAG
CTCCTCAACTTCGAGATAGGCAGTCCGACCATCAAGACCTTCCTCAGGTGGCATACTGTCACTGACCCAATAGTACATAA
TCTCTGACTATTTTCATTCTGTGTCTAACTGAATCTTTGTGCATTTCC-------CCCCTGTTTTGCTAATTTCAGGCGG
TTTACAAGATCTGGCCCAGAAGACAAGAAGGTGACTACTACCAATCCTTTAAATTCTCCATATTGGATCCATTTGATTTA
ATTCTTCCTCAACTGCTTATGTGTGTGGGTGCCTGAAGTTATTCTTGCATGCTTGTCACA-GCGCTCCAGCTTATTAC--
-------TGGAGTTCATGGGTAGCTATCTTGCTGAGCTGAGTCTTCTGGACTACAGCTGTCTCTGGTTCTTGCCATCAGT
GGTTGCTGCTTCATCA-CTTTTTCTTGCTAGGCTGACCATTGGACCAGACACTAATCCGT-GGGTAAGAGTGGAGAAGTA
GAACGTGGAAGCTTGAAA-TGTTG-CTTTTGATATTTCAAGTTCTCAAAGCTAAAGCTATCCTGTGATTATGTGGTTGCA
GGGCAAGGAAATGCATAAACTGACAGGCTACAAGGCATCAGAGCTGAAGGATTGCATTATAGCCATACATGATTTGCAGC
TCAGTAGAAAGGGTCCATCTTTACCAGCAATTCGAGACAA--GTATAAGCAACACAGGGTATGCTCAACTCCAACAGTTA
TGTAATATTCCTTTGGTGTTGTTATGCTTGTATTGTTTGGTCTAATTCTCTAATCATTTGGAACAGTTCAAATGTGTATC
GATGTTGCTTCCTCCTGTCGAGATCCCTGCATTGTACTTCCAAGACTTAACAGAGTAGCTGTTCCTGGACCGCTCCACTG
TAAAGCTAATAACTCAGAGCTCATCTTGAGCTCCTTGGGATAAGGGAGAATTACAGTTTCAGAGCAGGTTCTCAGACAAG
TTAGAATGCTGGAAGCTGTTTAGATGCTTGAGGTTTAAAAGCCTAACCAGGAGCTTTTCAAATTCATTTAGGAGCTAGGT
TTATCACAAGTAGGAGGCCAGGCATTCTCTTCTTTTGTAGAATTGTACTTCTGTATTA-TATCTTAGAACAATGTGCCTT
G---GTCTGTTTGGCCACATATCTGTAATGTTTGATATATGTTCATCCATTGTCTTTGCTGTTTTTTCTTCTTCTTTTGA
TCTGTTACCTGTGAGTGTGCTTGCAATACCTATGACCTACCTTTCTATCGAGGGGTTGTATTAGAAATTACCTGTGAGTG
TGCTTGCAATACCTATGACCTACCTTTCTATCGAGGGGTTGTATTAGAAATAGGCCTAAAGAACATAGCTTGCATGAATA
ATCATACTTGGCAAGATGCTTATTTTTCACTATCTAACTATCACCTTGATAGCTTGTCAGTGCAACATTC-TTATTGAAT
CGAAATCCAAGAGGCCTCAGTCATTTCCAATGAATGATCAACCCATTTGCTGCCTATAAGGTGTTCACTTCTGAATGACT
GGTTATAAATTTGATGGCACACTAAACATCATTTATTGAGGTTCAAAACACATTTACCGAGCAATATGTAGACCAGATGA
TGGCAGATGGATGGTTCTTGGTTTTCTTCAGTCTACCATGCAAAGTTATGCTTATTGTAATTTTCAATTGATTACTGAAG
TAGTGCTGTATAAGACACTGTCACGCTGAACATGCTTTCCATTTACCATCTGGATCTGGATCTGGAGTTTTGGACTACCA
ATATCCAGTGGAGTACTTGTGAGGCACCTTC-----TTTGTGTGTGCGTGTGTGTGTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCAACTGATGTAGCCGAAACTTCCTAAATGGTTACATATT--------ATTCTTGCTAA
TGAATGTGCAAGCAAAGTTCGTGCACTAGTCCATTGCATTTTTCAACTTGATGGACTATAATGAATCGATGTGTCAAATT
GTTGTATCTCCACTGCAATTGTCTCTTTACTTTGTTATAAATGATTACAT--GTCTATTCTTGCTAATGCCATTCTTATG
AACAGTAACTACTAATATTGTGTGCAATATTTTCCTCAAAATAATAATAATTTTGTATGCAATACTGTATTCCAGACTAC
TTATGTTTGGAAAAGGAAGGTGTATTTCAAATTCTGATGCAAAAGAAGGTGTGCTGTTCCATCTCTTTCCCTAAAGAATA
TGCTACGGAGTAGATTTACTTGGTGTTCCCTACATGCATACAATGAGCAATACTTCAGGGATAATTAGGGTAGCTTAGTC
CTTTTCAATGTTTCCTTGGTCTAAGTGCAAGGCGGAATATGCTCTGTATTTTCACAGAAGGAGTAATTTAGATGCCATAT
TTGCTTGATAAATTTGCATAAATATGCTCTGT------ATGATCTTACTGTTTTGTACCGGACTTTGCGGCTTCAGGTAT
CTGTATCTCTGCTTAATTTGCATTTT-TTAATCAAAGCTTCACATAGCTATGTGTTAATTTGCTCATTTTCTGGTGATTT
TTTAAGGTATTTATTTTGATCTGCATGAGAGTTCATATTATCTCTGTCCAACTATTACACTCCATGGTATGCTAGGTTAA
CGAAAACAGGAACTCACAGGTAATGTTTGATATATTGTTGATCCATTGCCTTTGCTGATTCTTTTTCTTTTGATCTATCA
TTTGTGAGTGTGCTTACAGTACCTATGACCTACCTTTCTACTTAGGAGTTGTAT--------------------------
---------------------------------------------------------TAGAGATAGGCCTAAATAACATA
GCTTGCATGAATAATCATACTTGGCATGGTGCTTGTTTTTCACTATTTAACTATCACCTCGATAGCTTGTTAGTGTAAGT
GGCTTTATTTATAAAGTCGGGCTATCGCCTTTTATCTATATAAAAAAAAGCTTGTTAGTGTAACATTCTTCATTGAATCA
AAATCCTAGAGGCCTGAGTCATTTCCAATGAATGATCAACCCATTTGCTGCCTATAAGGTGTTCACTTCTGAATGACTCA
TTATAAATTTGATGGCACACTAAACAGCATTTATTGAGATTCAAAACACATTTACTGAGCAATATGCAGACCAGATGATC
GCAGATGGATGTTTCTTGGTTTTCTTTAGTCTGCTGTGCGAAGTTATA-GCTTATTGTAATTTTCAATTGATTACTGAAG
TAGTGCTGTATAAGACACCGTCACGCTGAACATGCTTTCCATTTACCATATGCATCTGGATCTGGAGTTCTGGACTACCA
ATATCCACAGTGGAGTTA--------------------------------------------------------------
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---------------TTGTGAGGCACCTTAATTCTTTTTTTGTGTGTGTGTGTGGT---------GGTGGTGGTGGGGGA
CCTTAATACTTTTCTGATGGCAACTGATGCAGACGAAACTTCCTAAATGATTACATGTGTATTCTTCCTAATGAATATGC
AAGCAAA
>chr5D_479
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------------------------------------------------------------------------------AA
AAACTCACGGTCTCTCGCAAAAAGAAAAAAAAGTACTATATTTTAATAACGATGACACCACCACCGAAATACAATTTCGT
GGCC-AAAAAGTGTTGGGCCAAGAAAAGA-----GAAACCCCCGATCC---GGAGTGTGCTGTTTCGCGCTGGAACGCGG
AAGGCCCAGTACGATTTCGGAGGGGGA----GCTGGCGGGCAGGCAGGCGCCGCGGGATTTCCGTATTATTTTAAAACTT
TTACCGCCCACCTCTCA--CCAGCACGTGCGCCCCACTCCATCCAAAATTCCCCAATCCTATAGCAAGCGAAAATCCTAT
AGAGCTCAGCAAGCGAAACCCG-----GCGCAGCGCGGGCTTCTTCTCCCTCCCTCCTCTTCGAATTCGCGTGTTTTGGC
GGCCATCTTCCCTCCCATTCCTCCAATCCCCTCTACATAACGCAACCGCCGCCGCCTCCCATCTCCCCTCGCCGCGCACC
GAATCCCAAACCCTACCCCCGCCGCCCCGGGGAGCACGAGCCCGCCGACCATGGCCGACAAGGAGAACGCGGCCCCCGCC
GCGGAGGCTGGCCCCCGGCTCACCCGTGCCGCGGCCAAGCGCGCCGCCACCTGCTCCGCGGGCCCCTCCGGCGGCGCCAA
GCGGAAGCGGGTGGCGCTCAGCGAGCTCCCCATCGTCTCCAACGCGGGGGTCGTCCTCCGCCAGCCGTCGAAGCCCGCCA
AGCCCGCGGCTGCGGCCAAGGGGGAGGAGGAGCGCGGGGGCTTGAGCAGGTGCGCGTCCACCTCGCCGACCCCCGCCGAG
GAGGAGGTCAGCGGCGGCGGCGGCGGCAGCGAAACCCAGCTCAGCGGGTCCTACGCCTCCGACATCTACACCTACCTCCG
CACTATGGAGGTACGGCACTCCCGATTCCTGATCTCCATTTCTGGCCGTCGGATGCCTCGATCCGTCGGCGCTGGGGTTG
GGTGGGAACGACTGGTCTGATGTCTAATCATTGGTTCGTCCGAATGGGGTGTGCAGGTGGAGGCGCCGCGCCGGCCGGCG
GCAGACTACATCGAGACCGTGCAGACGGACGTGACGGCCAACATGCGGGCTATCCTAATCGACTGGCTCGTCGAGGTTGC
CGAGGAGTACAAGCTCGTTGCCGACACGCTTTACCTCACAGTCTCCTATGTCGACCGCTTCCTCTCCGCCAACCCGCTCG
GCCGCAACAGGCTGCAGCTCCTTGGTGTCGCTGCAATGCTCATTGCCTCGTAAGCGCAGCCTCCTGCCCCATTTCCTTGA
AGGGTTCGAAAAGATTTTGTGGATTGAGTTGGATTGGCTTTGGGGTGGTTGCAGGAAGTACGAGGAGATCAGTCCCCCGC
ATGTGGAGGACTTCTGCTACATCACGGACAACACCTACACCAGGCAGGAGCTTCTCACCATGGAGAGCGACATACTCAAG
CTCCTCAACTTCGAGATAGGCAGTCCGACCATCAAGACCTTCCTCAGGTGGCATACTGTCACTGACCCAATAGTTCATAA
TCTCTGAATATTTTCATTCCGTGTCCAACTGAATCTTTGTGCATTCCC-------CCCCTGTTTTGCTAATTTCAGGCGG
TTTACAAGATCTGGCCCAGAAGACAAGAAGGTGACTACTACCAATCCTTTAAATTCTCCATATTGGATCCATTTGATTTA
ATTCTTCCTCAACTGCTTATGTGTGTGGGTGCCTGAAGTTATTCTTGCATGCTTGTCACA-GCGCTCCAGCTTATTAC--
-------TGGAGTTCATGGGTAGCTATCTTGCTGAGCTGAGTCTTCTGGACTACAGCTGTCTCCGGTTCTTGCCATCAGT
GGTTGCTGCTTCATCA-CTTTTTCTTGCTAGGCTGACCATTGGACCAGACACTAATCCTT-GGGTAAGAGTGGAGAAGTA
GAATGTGAAAGCTTGAAA-TGTTG-CTTTTGATATTTGAAGTTCTCAAAGCTAAAGCTATCCTGTGATTATGTGGTTGCA
GGGCAAGGAAATGCATAAACTGACAGGCTACAAGGCATCAGAGCTGAAGGATTGCATTATAGCCATACATGATTTGCAGC
TCAATAGAAAGGGTCAATCGTTACCAGCAATTCGAGACAA--GTATAAGCAACACAGGGTATGCTCAACTCCAACAGTTA
TGTAATATTCCTTTGGTGTTGTTATGCTTGTATTGTTTGGTCTAATTCTCTAATCATTTGGAACAGTTCAAATGTGTATC
GATGTTGCTTCCTCCTGTCGAGATCCCTGCATCGTACTTCCAAGACTTAACAGAATAGTTGTTCCTGGACCGCTCCACTG
TAAAGCTAATAACTCTGAGCTCATCTTGAGCTCCTTGTGATAAGGGAGAATTACAGTTTCAGAGCAGGTTCTCAGACAAG
TTAGAATGCTGGAAGCTGTTTAGATGCTTGAGGTTTAAAAGCTTAACCAGGAGCTTTTCAAATTCATTTAGGAGCTAGGT
TTATCACAAGTAGGAGGCCAGGCATTCTCTTCTTTTGTAGAATTGTACTTCTGTATTA-TATCTTAGAACAATGTGCCTT
G---GTCTGTTTGGCCACATATTTGTAATGTTTGATATATGTTCATCCATTGTCTTTGCTGATTTTTCTTCTTCTTTTGA
TCTGTTACCTGTGAGTGTGCTTGCAATACCTATGACCTACCTTTCTACCA------------------------------
---------------------------------AGGGGTTGTATTAGAAATATGCCTAAATAACATAGCTTGCATGAATA
ATCATACTTGGCAAGATGCTTATTTTTCACTATCTAACTATCATCTTGATAGCTTGTTAGTGCAACATTCTTTATTGAAT
CAAAATCCAAGAGGCCCGAGTCATTTCCAATGAATGATCAACCCATTTGCTGCCTATAAGGTGTTCACTTCTGAATGACT
CGTTATAAATTTGATGGCACTT----------------------------------------------------------
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---------------------------------------------------------------------CTTAATTCTTT
TCTGATGG------------------------------------------------------------------------
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----------------------CAACTGATGTAGCCGAAACTTCCTAAATAGTTACATATTTATTATTTATTCTTGCTAA
TGAATGTGCAAGCAAAGTTTGTGCACTAGTCCATTGCATTTTTCAACTTGATGGACTATAATGAAGTGATGTGTCAAATT
GTTGTATCTCCACTGCAATTGCCTCTTTACTTTGTTATAAATGATTACATGTGTCTATTCTTGCTAATGCCATTCTTATG
AACAGTGACTACTAATATTGTGTGCAATACTTTCCTCATAATAATAATAATTTTGTATGCAATACTGCATTCCAGACTAC
TTATGTCTGGAAATGAAAGGTGTATTTCAAATTCTGATGCAA---AAGGTGTGCTGTTCCATCTCTTTCCCTAAAGAGTA
TGCTACGGAGTAGCTTTACTTGGTGTTCCCTACATGCATACAATGAGCAATACTTCAGGGATAATTAGGGTAGCCTAGTC
CTTTTCAATGTTTCCTTGGTCTAAGTGCAAGGTGAAATATGCTCGGTATTTTCACGGAAGGAGTAATTTAGATGCCATAT
TTGCTTGATAAATTTGCATAAAATATAGCTCAAGTTAGATGATCTTACTGTTTTGTACCGGACTTCGCGGCTTCAGGTAT
CTGTATCTCTGCTTAATTTGCATTTTTTTAATCAAAGCTTCACATAGCTATGTGTTAATTTGCTCATTTTCGTGTGATTT
TTTAAGGTATTTATTTTGATCTGCATGAGAGTTGATATTATCTCTGTCCAACTATTATACTCCATGGTATGCTAGGTTAA
CGAAAACAGTAACTCACAGGTAATGTTTGATATA-TGTTGATCCATTGCCTTTGCTGATTCTTTTTCTTTTGATCTGTCA
CCTGTGAGTGTGCTTACAGTACCTATGACCTACCTTTCTACCTAGGGGTTGTAT--------------------------
---------------------------------------------------------TAGCGATAGGCCTAAATAACATA
GCTTGCATGAATAATCATACTTGGCATGATGCTTGTTTTTCACTATTTAACTATCACCTCGATAGCTTG-----------
------------------------------------------------------TTAGTGTAACATTCTTTATTGAATCA
AAATCCTAGAGGCCTGAGTCATTTCCAATGAATGATCAACCCATTTGCTGCCTATAAGGTGTTCACTTCTGAATGACTCG
TTATAAATTTGATGGCACACTAAACAGCAATTATTGAGATTCAAAACACATTTACTGAGCAATATGCAGACCAGATGATC
GCAGATGTATGCTTCTTGGTTTTCTTTAGTCTGCTGTGCA----------------------------------------
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>chr5D_1995
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----------TTTTGAATCTGTGTCTAACTGAATCATTGTGTATTTTC-------CCTTTGTCTGACTAATTTCAGGTGG
TTTACAAGATCTGACCCAGAAGACAAAAAGGTG---ACTACCAATCCTTTAAATTCGTCATATTGGACCAATTTAATTTA
ATTCTTCCTCCATTGCTTCTGTGTGTCGATGCCTGAAGTTATTCTTGCATGCTTTGTTGTGGCGCTCCAGCTTG-TTACT
GGAGTAGTGGAGTTCCTGGGTAGCTATCTTGCTGAGCTGAGTCTTCTGGACTAGAGCTGTCTCCTGTCCTTGCTATCAGT
GATTTCTGCTTCATCAGTTTTTTCTTGCTAGGCTGACCATTGGATCAGACACGAATCCTCGGGGTAAGAGTGGAGAAGTA
GATTCTCAAAGCTCAAAA-TGTTTTCC-TTGATATTTCAAGTTCTCAAGGCTAAAACTAACCTGTGATTA---TGTTGCA
GAGCAATGAAATTCAGAACTTGACAGGCTGCAGGGCATCAGAGCTGAAGGACTC--------CCAGACATGATTTGCAGC
TAAATATAAAGGGTCCATC-------------------------------------------------------------
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>chr5B_1995
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--------------------------------------------------------------------------------
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----------TTTTGAATCTGTGTCTAACTGAATCCTTGTGTATTTTCCCTTTGTCTC-------ACTAATTTCAGATGG
TTTACAGGATCTGGCCCAGGAGACAAAAAGGTG---ACTACCAATCCTTTAAATTCGTCATATTGGACCAATTTCGTTTA
ATTCTTCTTCCACTGCTTCTGTGTGTCGATTCCTGAAGTTATTCTTGCATGCTTTGTTGCGGCGCTCCAGCTTG-TTTCT
GGAGTAGTGGAATTCCTGGGTAGCTATCTTGTTGAGCTGAGTCTTCTGGACTAGAGCTGTCTCCTGTCCTTGCTATCAGT
GATTTCTGCTTCATCAGTTTTTTCTTGCTAGGCTGACCATTGGATCAGACACTAATCCTCGGG-TAAGAGCGGAGAAGTA
GATTCTCAAAGCTGAAAA-TGTTG-CC-TTGATATTTCAAGTTCTCAAGGCTAAAACTACACTGTGATTATGTGGTTGCA
GAGCAAGGAAATTCAGAACTTGACAGGCTACAGGGCATCAGAGCTGAAGGACTGCATTATAGCCATACATGATTTGCAGC
TAAATATAAAGGGTTCATCATTACCAGCAATTCAAGACAAAAGTATAAGCAACGCATGGTATGCGCAACTCCAACAGTTA
TGTGATATTCCTCTGATATTGTTTTGCTGGTAGTG-TTAGTCTAATTCTCTAATCATTTGGAGCTTTTCAAATTT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATTTAGGTGCTA-GT
CTATCACAAGTAAGAGGCCATGCATCCTC----TTTGTAGAATCGTACTTCTGTATTACTATCTTAGAACATTGTGCCTT
GTTGGTCTGTTTAGCCACATATCTGTAGTGGTTGATATATGC--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------TGATCCATTGCCTTTACTGATTATTTTTCTTTTGATCTGTTA
CCTGTGAGTGCGCTTACAGTACCTACGACCTACCTTTCTACCAATGGGTTGTACTCCCTCCGTAAAGAAATATAAGAGCA
TTTAAATCACTAAAGTAGTGATCTAAACGCTCTTATATTTGTTTACAGAGGGAGTACTAGACATAGGCCTAAATAACATA
GCTTGCATGAATAATCATCATGGTCTC--------TTTTTGACTAT-----TATCATCTCGATAGCCTG-----------
------------------------------------------------------CTAGTGTAACATTCTTTGTTGAATCA
AAATCCTAGAGATCTGAGTCATTTCCAATGTATGATCAACCCATTTGCTGCCTGTAAGTTTTTCACCTCTAAATGACTGG
TTACAAGTTTGATGGCACACTAAACTTCTATTGGGATATTC--AAAAAAAGTTGCCGAGCAATATGATGGCAGATGGGCG
G------------TCCTGGTTTTCTTCAGTCTGCTGTGCAAAGTTATCTGCTTACTGTAATTTTTAATTGATTACTGATG
TATAGCTGTATAAGACACCTTAATGCTGAGCATGATTTCCATTAGCCATATGCATCTGGA--------------------
--------------------------------------------------------------------------------
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>chr5D_2033
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-------------------------------------------------------CTC-------ACTAATTTCATGTCG
TTTACCAGATCTGGCCCAAGAGACAGA----TG---ACTACCAATCCTTTAAATTTGTCATATTGGACCAATTTCATTTA
ATCCTTCCTTCACTGCTTCTGTGTGTCGACGCCTGAAGTTATTCTTGCATGCTTTGTTGCTGCGCTTCAGCTTG-TAC--
-------TGGAATTCCTAGGTAGCTATCTTGTTGAGCCGAGTCTTCCTGACTAAAGTTGTTTCCTATTCTTGCCA---GT
TATTGCCGCTTCATGA-ACTTTTCATGCTAGGCTGACCACTGGACTAGACACTAATCCTC-GG-TAAGAGCAGAGAATTA
CATTCTCAAAGCTAAAAAATGTTG-CCTTTGATATTTCAAGTTCTGAAGGCTAAAACTATCCTGTGATTACGTGTTTGTA
GAGAAAATAAATGCAGAAACTGACAGGCTACAGGGCATCAGAGCTGAAGGATTGCATTATAGCCATACCTGATTTGTGGC
TCGATAGAAAGGGTCCATCTTTACCAGCAATTCGAGACAAAAGTATAAGCAAAACAGGGTATGCGCAACTCCAACCGTTA
TCTAGTATTCCTCTGATACTATTATGCTGGTAGCG-TTGCTCTAATCCTCCAATCATTTGGAACAATCCAAATGTTTATC
AACGATGCTTCTTCCTGT--------------------------------------------------------------
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>chr5A_2038
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-------------------------------------------------------------------TAATGTCATGTGG
TTTACAAGATCTAGCCCAAGAGACAA-AAGGTG---ACTACCAATCCTTTCATT-----ATATTGGACCAACTTCATTTA
ATCCTTCCTCCATTGCTTCTTTGTGTCGACGCCTGAAGTTATTCTTGCATGCTTTGTCGCGGTGCTCCAGCTTGTTAC--
-------TTGAGTTCCTGGGTAGCTATTGTGCTGAGTCGAGTCGTTTGGACTAGAGTTGTTTCCCGTTCTTGCCATCAA-
TATTGTTGCTTCATCA-TTTTTTCTTTCTAGGTTGACCACTGGGCTAGATACTAATCCTC-GGGTAAGAGCTAAGAGGTA
GATTCTGAAAGCTCATTT-TTTTG-CCTTTGATATTTTGTGCTCTCAAGGCTAAA-CAATCCTGTGATTTTGTGTA-GTA
GAGTAAGGAAATGCA-AAACCGATAGGCTACAAGGCATCAGAGCTGAAGGATTGCATTATAGCCATACAAGATTTGCGGC
TCAATAGAAAGGGCCCATCTTTACCAGCAATTCGAGACAAAAGTATAAGCAACGCAGGGTATGCACAACTCCAGCAGTTA
TGTGATATTTCTATGATACTTTTATGCTAGTAATG-TTAGTCTAATTATCTAATCATTTGGAATAGTTTAAACGTGTATC
--CGATGCTTCCTCTTGT--------------------------------------------------------------
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>chr5A_3100
TATGA---------------------------------------------------------------------------
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----------------------------CCTACCTTTCTACCTAGGGGTTGTAT--------------------------
---------------------------------------------------------TAGAGATAGGCCTAAATAACATA
GCTTGCATGAATAATCATACTTGGCATGATGCTTGTTTTTCACTATTTAACTATCACCTCGATAGCTTG-----------
------------------------------------------------------TTAGTGTAACATTCTTTATTGAATCA
AAATCCTAGAGGCCTGAGTCATTTGCAATGAATGATCAACCCATTTGCTGCCTATAAGGCGTTCACTTCTGAATGACTCG
TTATAAATTTGATGGCACACTAAACAGCAATTA--GAGATTCAAAACACATTTACTGAGCAATATGCAGACCAGATGATC
GCAGATGTATGTTTCTTGGTTTTCTTTACTCTGCAGTGCAAAGTTATATGCCTATTGTAATTTTCAGTTGACTACTGAAG
TAGTGCTGTATAAGACACCGTCACGCTGAACATGCTTTCCATTTACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCTTGTGAGCCACCTTAATTCTTTTTGTCTCTGTGTGTGGTGGTGGTGGGTGGGTGGGGGGGGGGGA
CCTTAATTCTTTTCTGATGGCAACTGATGCAGACGAAACTTCCTAAATGATTACATGTGTATTCTTACTAATGAATGTGC
AAGCAAA
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-------
---S---------------------------------S--------S---------------------------------
-----------------------------SSSSS-----------S--SSS-----------------------------
S----------------S--------SSSSS-------------------------------------------------
----------------SS--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S------------SS------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-----------------------------S---------------------------------------------S----
------------------------------SS------------------------------------------------
-----------------S-S----------------------------------------------S-------------
-------S----------------------------S----S-------------------------S------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-------S--------------------------------------------------S-----S-S---S---------
---S-------------------------------------------S-S------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------S---------------------S--S----
------S-------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------------S---------------------------------------------------------------
--------------------------------------------------------------------S-----------
---------------S--------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S--------------S---------------------S----S-----------------
------------------------------------SS---------------------S--------------------
-----------------------S--------------------------------------------------------
---S--------------------------SSSSSS----------S----------SSSSSSSSSSSS-----------
--------------------------------------------------------------------------------
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-----------------------------------------S--------------------------------------
------------S---S-S--SSS-SSSSSS-S-----------------------------------------------
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-------
>forward_243
--------------------------------------------------------------------------------
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---------------------------------------------------------------GTGCGGCCCAAGACATT
TTT-----------------------------------------------------------------------------
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>reverse_1477
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------------------------------------TGTCCAAATGGGGTGTGCAG------------------------
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-------
>forward_440
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------CCCGCCGTAGTTCCCTAAAA----------------------------------------
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>reverse_1810
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-------------------------------------------------CGCAGGAAGTACGAGGAGATC----------
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>forward_1541
--------------------------------------------------------------------------------
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-CAGACTACATCGAGGCGGTC-----------------------------------------------------------
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>reverse_2789
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GCCGCTCCACTG
TAAAGCTA------------------------------------------------------------------------
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-------
